Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68104.t1 | XP_024640278.1 | 99.7 | 334 | 1 | 0 | 1 | 334 | 1 | 334 | 1.10E-180 | 642.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68104.t1 | Q9LZ82 | 64.8 | 332 | 95 | 2 | 1 | 332 | 1 | 310 | 1.1e-112 | 407.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68104.t1 | B3SGL8 | 99.7 | 334 | 1 | 0 | 1 | 334 | 1 | 334 | 7.8e-181 | 642.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049807 | MS.gene68104 | 0.829051 | 6.39E-55 | -1.69E-46 |
| MS.gene050838 | MS.gene68104 | 0.864028 | 1.63E-64 | -1.69E-46 |
| MS.gene051234 | MS.gene68104 | 0.82144 | 4.03E-53 | -1.69E-46 |
| MS.gene051343 | MS.gene68104 | 0.815743 | 7.91E-52 | -1.69E-46 |
| MS.gene051885 | MS.gene68104 | 0.82834 | 9.49E-55 | -1.69E-46 |
| MS.gene052307 | MS.gene68104 | 0.813003 | 3.19E-51 | -1.69E-46 |
| MS.gene052335 | MS.gene68104 | 0.813812 | 2.12E-51 | -1.69E-46 |
| MS.gene052609 | MS.gene68104 | 0.817544 | 3.12E-52 | -1.69E-46 |
| MS.gene053143 | MS.gene68104 | 0.816769 | 4.66E-52 | -1.69E-46 |
| MS.gene053581 | MS.gene68104 | 0.805367 | 1.38E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene68104 | 0.812472 | 4.17E-51 | -1.69E-46 |
| MS.gene055424 | MS.gene68104 | 0.817724 | 2.84E-52 | -1.69E-46 |
| MS.gene055469 | MS.gene68104 | 0.803721 | 3.04E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene68104 | 0.825036 | 5.83E-54 | -1.69E-46 |
| MS.gene056522 | MS.gene68104 | -0.83466 | 2.64E-56 | -1.69E-46 |
| MS.gene056677 | MS.gene68104 | 0.81478 | 1.29E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene68104 | 0.828264 | 9.90E-55 | -1.69E-46 |
| MS.gene058074 | MS.gene68104 | 0.841099 | 5.83E-58 | -1.69E-46 |
| MS.gene058720 | MS.gene68104 | 0.820755 | 5.80E-53 | -1.69E-46 |
| MS.gene059170 | MS.gene68104 | 0.829038 | 6.44E-55 | -1.69E-46 |
| MS.gene059171 | MS.gene68104 | 0.819207 | 1.31E-52 | -1.69E-46 |
| MS.gene059227 | MS.gene68104 | 0.813416 | 2.59E-51 | -1.69E-46 |
| MS.gene061100 | MS.gene68104 | 0.837227 | 5.89E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68104.t1 | MTR_1g090773 | 99.701 | 334 | 1 | 0 | 1 | 334 | 1 | 334 | 0.0 | 673 |
| MS.gene68104.t1 | MTR_1g090773 | 98.406 | 251 | 1 | 1 | 87 | 334 | 1 | 251 | 4.05e-179 | 496 |
| MS.gene68104.t1 | MTR_1g090773 | 27.397 | 219 | 108 | 3 | 26 | 193 | 26 | 244 | 2.59e-14 | 72.0 |
| MS.gene68104.t1 | MTR_2g019090 | 27.523 | 327 | 179 | 10 | 38 | 322 | 314 | 624 | 2.50e-20 | 92.4 |
| MS.gene68104.t1 | MTR_2g019090 | 26.552 | 290 | 158 | 9 | 38 | 285 | 315 | 591 | 1.97e-14 | 74.7 |
| MS.gene68104.t1 | MTR_1g016760 | 28.155 | 206 | 123 | 6 | 39 | 232 | 115 | 307 | 4.47e-13 | 70.5 |
| MS.gene68104.t1 | MTR_6g012630 | 23.611 | 216 | 141 | 6 | 36 | 230 | 47 | 259 | 2.97e-12 | 67.8 |
| MS.gene68104.t1 | MTR_6g012630 | 23.611 | 216 | 141 | 6 | 36 | 230 | 47 | 259 | 4.25e-12 | 67.4 |
| MS.gene68104.t1 | MTR_6g012630 | 23.611 | 216 | 141 | 6 | 36 | 230 | 47 | 259 | 5.06e-12 | 67.0 |
| MS.gene68104.t1 | MTR_3g104280 | 28.507 | 221 | 119 | 7 | 39 | 238 | 89 | 291 | 1.52e-11 | 65.9 |
| MS.gene68104.t1 | MTR_3g104270 | 29.310 | 174 | 89 | 6 | 39 | 192 | 89 | 248 | 2.43e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68104.t1 | AT5G04430 | 68.373 | 332 | 104 | 1 | 1 | 332 | 1 | 331 | 9.50e-168 | 470 |
| MS.gene68104.t1 | AT5G04430 | 64.759 | 332 | 95 | 2 | 1 | 332 | 1 | 310 | 1.02e-153 | 434 |
| MS.gene68104.t1 | AT4G10070 | 28.723 | 188 | 115 | 4 | 36 | 212 | 176 | 355 | 2.00e-12 | 68.6 |
| MS.gene68104.t1 | AT1G33680 | 30.286 | 175 | 112 | 5 | 36 | 207 | 232 | 399 | 3.22e-12 | 67.8 |
| MS.gene68104.t1 | AT1G51580 | 23.562 | 365 | 208 | 10 | 22 | 322 | 255 | 612 | 4.46e-12 | 67.4 |
| MS.gene68104.t1 | AT4G18375 | 27.119 | 295 | 172 | 12 | 50 | 322 | 113 | 386 | 6.79e-12 | 66.2 |
| MS.gene68104.t1 | AT4G18375 | 27.119 | 295 | 172 | 12 | 50 | 322 | 326 | 599 | 7.58e-12 | 66.6 |
| MS.gene68104.t1 | AT5G15270 | 24.911 | 281 | 175 | 11 | 36 | 291 | 50 | 319 | 1.49e-11 | 65.9 |
| MS.gene68104.t1 | AT5G15270 | 24.911 | 281 | 175 | 11 | 36 | 291 | 50 | 319 | 1.49e-11 | 65.9 |
| MS.gene68104.t1 | AT5G15270 | 24.911 | 281 | 175 | 11 | 36 | 291 | 50 | 319 | 1.60e-11 | 65.5 |
| MS.gene68104.t1 | AT4G26000 | 28.824 | 170 | 97 | 5 | 39 | 192 | 77 | 238 | 1.83e-11 | 65.5 |
Find 83 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGCTGCTGGTTCTGTTAT+TGG | 0.155104 | 1.1:-66312167 | MS.gene68104:CDS |
| AGTTCTCCATTTACATATTC+TGG | 0.187488 | 1.1:-66311269 | MS.gene68104:intron |
| GGTTCTTGTGGTGGAATAAT+TGG | 0.190144 | 1.1:-66311818 | MS.gene68104:CDS |
| TGCTTATGTCTCGGGTTATC+AGG | 0.225760 | 1.1:-66310323 | MS.gene68104:CDS |
| TGAGGAAAACCTTGCTGTTC+TGG | 0.228212 | 1.1:+66310212 | None:intergenic |
| GCCAACGTATGTTAGGTTTC+TGG | 0.253097 | 1.1:-66312198 | MS.gene68104:CDS |
| GCGTGCTTCCTCGGTCCTTC+TGG | 0.266060 | 1.1:+66314083 | None:intergenic |
| CACTGACCAGAATATGTAAA+TGG | 0.348856 | 1.1:+66311263 | None:intergenic |
| GACAGAGGCGATTACATATC+TGG | 0.356100 | 1.1:-66308975 | MS.gene68104:CDS |
| TAGAAAAGCCAACGTATGTT+AGG | 0.363086 | 1.1:-66312205 | MS.gene68104:CDS |
| GCTTTATATGATTAGCTTCA+CGG | 0.375367 | 1.1:-66311896 | MS.gene68104:intron |
| CCTCAAGATAATAGTTACTA+TGG | 0.376647 | 1.1:-66311401 | MS.gene68104:CDS |
| GATGGAAGCACATATGTATA+TGG | 0.380012 | 1.1:+66310295 | None:intergenic |
| ATTCATTATTGCGTGACAAC+TGG | 0.381238 | 1.1:+66312093 | None:intergenic |
| TGCTCTCTGCGATCCCGTTA+TGG | 0.386979 | 1.1:+66308803 | None:intergenic |
| ATACCTTGTGAAGGTGAATC+AGG | 0.397770 | 1.1:+66314047 | None:intergenic |
| GTGAGACTCATTGTTCCTAA+TGG | 0.398744 | 1.1:-66311839 | MS.gene68104:CDS |
| GATGACACGTAAGAAGATTC+AGG | 0.399735 | 1.1:+66314107 | None:intergenic |
| GATCGGATTATCATGGTATC+TGG | 0.414971 | 1.1:-66312053 | MS.gene68104:CDS |
| TACAGGAAAGTTACCATAAC+GGG | 0.415319 | 1.1:-66308816 | MS.gene68104:intron |
| ATTCCACCACAAGAACCATT+AGG | 0.428562 | 1.1:+66311824 | None:intergenic |
| AACTTTGCTCCAGTACCATT+AGG | 0.429145 | 1.1:+66310235 | None:intergenic |
| CTGGTATCAAACTCTGCTGC+TGG | 0.438478 | 1.1:-66312179 | MS.gene68104:CDS |
| GTTACTATGGACAAAATGAT+AGG | 0.441534 | 1.1:-66311388 | MS.gene68104:CDS |
| CGCAATAATGAATTCTTCCC+TGG | 0.444645 | 1.1:-66312083 | MS.gene68104:CDS |
| GTTCTTGTGGTGGAATAATT+GGG | 0.454264 | 1.1:-66311817 | MS.gene68104:CDS |
| GCTGGTTCTGTTATTGGAAA+GGG | 0.456735 | 1.1:-66312161 | MS.gene68104:CDS |
| ACATATCTGGAACAACTGAT+AGG | 0.462362 | 1.1:-66308962 | MS.gene68104:intron |
| TGGTTGTTGGCCGCGGTGGA+AGG | 0.467698 | 1.1:-66309134 | MS.gene68104:CDS |
| GGTGAAGAAGCGTGCTTCCT+CGG | 0.469105 | 1.1:+66314074 | None:intergenic |
| TGCTGGTTCTGTTATTGGAA+AGG | 0.479085 | 1.1:-66312162 | MS.gene68104:CDS |
| GGAAGGGAGGTGCTACCATC+AGG | 0.484173 | 1.1:-66311796 | MS.gene68104:intron |
| ATAGGATTGGTTGTTGGCCG+CGG | 0.486310 | 1.1:-66309141 | MS.gene68104:CDS |
| GGAGTGAATTACAGACCTAA+TGG | 0.486780 | 1.1:-66310250 | MS.gene68104:CDS |
| ATAATCCGATCAGTGGTTCC+AGG | 0.487212 | 1.1:+66312065 | None:intergenic |
| AATTACAGACCTAATGGTAC+TGG | 0.501753 | 1.1:-66310244 | MS.gene68104:CDS |
| AGGAACAATGAGTCTCACTT+TGG | 0.502565 | 1.1:+66311844 | None:intergenic |
| TAATTCACTCCGTTGTATGC+TGG | 0.514758 | 1.1:+66310262 | None:intergenic |
| ATATGTAAATGGAGAACTCA+TGG | 0.515463 | 1.1:+66311274 | None:intergenic |
| GGTGTTGCAGATGAGCATAT+AGG | 0.530598 | 1.1:-66309159 | MS.gene68104:CDS |
| AGTAACAGTGACAGGAACTC+TGG | 0.531115 | 1.1:-66311363 | MS.gene68104:CDS |
| GTTCCTAATGGTTCTTGTGG+TGG | 0.531212 | 1.1:-66311827 | MS.gene68104:CDS |
| GAATATATCAGATATTAGTC+AGG | 0.536388 | 1.1:-66309112 | MS.gene68104:intron |
| GAGCATATAGGATTGGTTGT+TGG | 0.541049 | 1.1:-66309147 | MS.gene68104:CDS |
| GATAGGATAGTAACAGTGAC+AGG | 0.551160 | 1.1:-66311371 | MS.gene68104:CDS |
| GCTTATGTCTCGGGTTATCA+GGG | 0.556130 | 1.1:-66310322 | MS.gene68104:CDS |
| AACCACTGATCGGATTATCA+TGG | 0.561992 | 1.1:-66312060 | MS.gene68104:CDS |
| CGAAGCAACTCAATGACCAT+TGG | 0.562529 | 1.1:-66309180 | MS.gene68104:CDS |
| TCTTCCCTGGAACCACTGAT+CGG | 0.566105 | 1.1:-66312070 | MS.gene68104:CDS |
| TGCTTATGCTACCGAGAGAG+TGG | 0.567022 | 1.1:-66308745 | MS.gene68104:CDS |
| GGTTCTGTTATTGGAAAGGG+TGG | 0.573790 | 1.1:-66312158 | MS.gene68104:CDS |
| TGCAGATGAGCATATAGGAT+TGG | 0.578537 | 1.1:-66309154 | MS.gene68104:CDS |
| GGATTGGTTGTTGGCCGCGG+TGG | 0.579630 | 1.1:-66309138 | MS.gene68104:CDS |
| TTCATTGAAGAATCTCAAGC+TGG | 0.580937 | 1.1:-66311437 | MS.gene68104:CDS |
| TATGCTGGTGGTGCAACAGA+TGG | 0.582226 | 1.1:+66310277 | None:intergenic |
| TGTGGTGGAATAATTGGGAA+GGG | 0.585404 | 1.1:-66311812 | MS.gene68104:CDS |
| TTGTGGTGGAATAATTGGGA+AGG | 0.587577 | 1.1:-66311813 | MS.gene68104:CDS |
| CCATAGTAACTATTATCTTG+AGG | 0.592910 | 1.1:+66311401 | None:intergenic |
| ATGCTCATCTGCAACACCAA+TGG | 0.602648 | 1.1:+66309164 | None:intergenic |
| GAGATAGATATACCTTGTGA+AGG | 0.605051 | 1.1:+66314038 | None:intergenic |
| AAATTACTACTCCACTCTCT+CGG | 0.611185 | 1.1:+66308734 | None:intergenic |
| TGTGAAGGTGAATCAGGAGG+AGG | 0.613856 | 1.1:+66314053 | None:intergenic |
| ATTGTTCCTAATGGTTCTTG+TGG | 0.614655 | 1.1:-66311830 | MS.gene68104:CDS |
| TAATCCGATCAGTGGTTCCA+GGG | 0.614702 | 1.1:+66312066 | None:intergenic |
| TTCACTCCGTTGTATGCTGG+TGG | 0.615585 | 1.1:+66310265 | None:intergenic |
| ATACAGGAAAGTTACCATAA+CGG | 0.616164 | 1.1:-66308817 | MS.gene68104:intron |
| TGAATCTATGATACTGCAGA+AGG | 0.623036 | 1.1:-66308769 | MS.gene68104:CDS |
| TACCATGATAATCCGATCAG+TGG | 0.623671 | 1.1:+66312058 | None:intergenic |
| ACTCTGGATGAGCAGATGCG+TGG | 0.628470 | 1.1:-66311347 | MS.gene68104:CDS |
| ATATGATTAGCTTCACGGCG+AGG | 0.636503 | 1.1:-66311891 | MS.gene68104:intron |
| CTCATGGAATGTGAATAATG+AGG | 0.636799 | 1.1:+66311290 | None:intergenic |
| ATCGCAGAGAGCAATTCGTA+CGG | 0.639819 | 1.1:-66308793 | MS.gene68104:CDS |
| GGTGGAATAATTGGGAAGGG+AGG | 0.640620 | 1.1:-66311809 | MS.gene68104:CDS |
| CCTCCTGATTCACCTTCACA+AGG | 0.648979 | 1.1:-66314050 | MS.gene68104:intron |
| AGCAAAGTTCCAGAACAGCA+AGG | 0.651421 | 1.1:-66310221 | MS.gene68104:intron |
| ACCAGAAACCTAACATACGT+TGG | 0.662582 | 1.1:+66312197 | None:intergenic |
| TCTTTCAAAGTTGCTCAGTG+AGG | 0.665119 | 1.1:-66311994 | MS.gene68104:intron |
| CCTTGTGAAGGTGAATCAGG+AGG | 0.679544 | 1.1:+66314050 | None:intergenic |
| AAGATAAAGATATCAGACAG+AGG | 0.683928 | 1.1:-66308990 | MS.gene68104:CDS |
| TCTTACGTGTCATCTCCAGA+AGG | 0.691710 | 1.1:-66314098 | MS.gene68104:CDS |
| TGTCATCTCCAGAAGGACCG+AGG | 0.694724 | 1.1:-66314091 | MS.gene68104:CDS |
| GTTGCACCACCAGCATACAA+CGG | 0.711710 | 1.1:-66310271 | MS.gene68104:CDS |
| CTGATATATTCCTTCCACCG+CGG | 0.760447 | 1.1:+66309124 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATAAGTATATAAATCAT+AGG | + | chr1.1:66313528-66313547 | None:intergenic | 10.0% |
| !! | TATTAATTTCAATTCTAATT+TGG | + | chr1.1:66309375-66309394 | None:intergenic | 10.0% |
| !!! | AATTTTAAGAATGTTTTTTT+AGG | - | chr1.1:66309893-66309912 | MS.gene68104:intron | 10.0% |
| !!! | AGTTTATTTTTTATTCTAAA+GGG | - | chr1.1:66312841-66312860 | MS.gene68104:intron | 10.0% |
| !!! | CATTTATTTTTAAAATATGA+GGG | - | chr1.1:66312394-66312413 | MS.gene68104:intron | 10.0% |
| !!! | CTAACAAATAATTTTTAAAT+TGG | - | chr1.1:66313217-66313236 | MS.gene68104:intron | 10.0% |
| !! | AAAATTAAATAATGCTGAAT+CGG | - | chr1.1:66310231-66310250 | MS.gene68104:CDS | 15.0% |
| !! | AATTTCATAAATATGGTAAA+CGG | + | chr1.1:66311122-66311141 | None:intergenic | 15.0% |
| !! | TATTATTTACTTATACATCA+GGG | - | chr1.1:66311943-66311962 | MS.gene68104:intron | 15.0% |
| !!! | AAAAATTATTTGTTAGTGTT+AGG | + | chr1.1:66313213-66313232 | None:intergenic | 15.0% |
| !!! | AAAATTATTTGTTAGTGTTA+GGG | + | chr1.1:66313212-66313231 | None:intergenic | 15.0% |
| !!! | AGTTTTTCTTACTATATTTT+AGG | - | chr1.1:66313325-66313344 | MS.gene68104:intron | 15.0% |
| !!! | ATTTGAATTTTAGGAATAAT+AGG | - | chr1.1:66312185-66312204 | MS.gene68104:CDS | 15.0% |
| !!! | ATTTGTTTTGTTTTGTTTTA+TGG | - | chr1.1:66309832-66309851 | MS.gene68104:intron | 15.0% |
| !!! | CAGTTTATTTTTTATTCTAA+AGG | - | chr1.1:66312840-66312859 | MS.gene68104:intron | 15.0% |
| !!! | GCATTTATTTTTAAAATATG+AGG | - | chr1.1:66312393-66312412 | MS.gene68104:intron | 15.0% |
| !!! | GTTTATTTTTTATTCTAAAG+GGG | - | chr1.1:66312842-66312861 | MS.gene68104:intron | 15.0% |
| !!! | GTTTTTCTTACTATATTTTA+GGG | - | chr1.1:66313326-66313345 | MS.gene68104:intron | 15.0% |
| !!! | TGAAATTTTAAGTTTTATGT+CGG | - | chr1.1:66310388-66310407 | MS.gene68104:intron | 15.0% |
| !!! | TTAATATTTTTTTTCTCCAA+TGG | - | chr1.1:66310158-66310177 | MS.gene68104:intron | 15.0% |
| !!! | TTGTTTGAAATTATCAAATT+TGG | - | chr1.1:66309682-66309701 | MS.gene68104:intron | 15.0% |
| !!! | TTTGTTTTGTTTTGTTTTAT+GGG | - | chr1.1:66309833-66309852 | MS.gene68104:intron | 15.0% |
| !! | AAACTACCATAATTAGTATT+GGG | + | chr1.1:66312346-66312365 | None:intergenic | 20.0% |
| !! | AACTAATTGAATCAATATCA+TGG | + | chr1.1:66310894-66310913 | None:intergenic | 20.0% |
| !! | AAGGTAAAATATGATTAAGA+TGG | - | chr1.1:66312052-66312071 | MS.gene68104:CDS | 20.0% |
| !! | ATTTCATAAATATGGTAAAC+GGG | + | chr1.1:66311121-66311140 | None:intergenic | 20.0% |
| !! | CAAATTGTAAACAACAAAAT+AGG | + | chr1.1:66313381-66313400 | None:intergenic | 20.0% |
| !! | CAGTACTAATTTCATAAATA+TGG | + | chr1.1:66311129-66311148 | None:intergenic | 20.0% |
| !! | CATCAATTTAATCTTGTTAA+TGG | - | chr1.1:66312670-66312689 | MS.gene68104:intron | 20.0% |
| !! | CATTAACAAGATTAAATTGA+TGG | + | chr1.1:66312672-66312691 | None:intergenic | 20.0% |
| !! | GTATTATGCAAATATTTCAA+AGG | + | chr1.1:66313128-66313147 | None:intergenic | 20.0% |
| !! | GTATTATTTACTTATACATC+AGG | - | chr1.1:66311942-66311961 | MS.gene68104:intron | 20.0% |
| !! | TAAACTACCATAATTAGTAT+TGG | + | chr1.1:66312347-66312366 | None:intergenic | 20.0% |
| !! | TATCCATGTTGTTAAATAAT+TGG | - | chr1.1:66309982-66310001 | MS.gene68104:intron | 20.0% |
| !! | TATTTAACAACATGGATAAT+CGG | + | chr1.1:66309980-66309999 | None:intergenic | 20.0% |
| !!! | AACTTTTTAACATGCATTTT+AGG | - | chr1.1:66312510-66312529 | MS.gene68104:intron | 20.0% |
| !!! | CTTAATGTCATTTGAATTTT+AGG | - | chr1.1:66312176-66312195 | MS.gene68104:CDS | 20.0% |
| !!! | GATTTTATTTTGTGAAAGAT+TGG | - | chr1.1:66309300-66309319 | MS.gene68104:intron | 20.0% |
| !!! | TTTTAATGTTATTCAGAGAT+GGG | - | chr1.1:66311352-66311371 | MS.gene68104:CDS | 20.0% |
| !!! | TTTTTAATGTTATTCAGAGA+TGG | - | chr1.1:66311351-66311370 | MS.gene68104:CDS | 20.0% |
| !!! | TTTTTTTATCCTGTTTCTTA+CGG | - | chr1.1:66309181-66309200 | MS.gene68104:CDS | 20.0% |
| ! | AAATGTATTCTATGAATCAC+GGG | + | chr1.1:66312101-66312120 | None:intergenic | 25.0% |
| ! | AAGATTAAATTGATGGAATG+AGG | + | chr1.1:66312665-66312684 | None:intergenic | 25.0% |
| ! | AAGCTAAACTAACAATATGT+TGG | + | chr1.1:66311849-66311868 | None:intergenic | 25.0% |
| ! | AATAAGCATATGTTATTGTC+AGG | - | chr1.1:66311295-66311314 | MS.gene68104:CDS | 25.0% |
| ! | ACTTATATGTCTATTACCAA+TGG | - | chr1.1:66313433-66313452 | MS.gene68104:intron | 25.0% |
| ! | AGCTAAACTAACAATATGTT+GGG | + | chr1.1:66311848-66311867 | None:intergenic | 25.0% |
| ! | ATAAAAAATGTCTTGCATTG+CGG | - | chr1.1:66310920-66310939 | MS.gene68104:intron | 25.0% |
| ! | ATATTGAAGGGAAGAATAAT+CGG | - | chr1.1:66309590-66309609 | MS.gene68104:intron | 25.0% |
| ! | ATCCTTCACATCAATTAATT+TGG | + | chr1.1:66309140-66309159 | None:intergenic | 25.0% |
| ! | ATTGTAAACAACAAAATAGG+TGG | + | chr1.1:66313378-66313397 | None:intergenic | 25.0% |
| ! | CACATTTGTGTGATTAATTT+AGG | - | chr1.1:66309757-66309776 | MS.gene68104:intron | 25.0% |
| ! | GAAAGAAACAAAAATCACAT+CGG | + | chr1.1:66308997-66309016 | None:intergenic | 25.0% |
| ! | GAAATGTATTCTATGAATCA+CGG | + | chr1.1:66312102-66312121 | None:intergenic | 25.0% |
| ! | GAATATATCAGATATTAGTC+AGG | - | chr1.1:66313744-66313763 | MS.gene68104:intron | 25.0% |
| ! | GCAATATCTAATTAGCTAAA+AGG | - | chr1.1:66312975-66312994 | MS.gene68104:intron | 25.0% |
| ! | GTACCAATTATTTAACAACA+TGG | + | chr1.1:66309988-66310007 | None:intergenic | 25.0% |
| ! | TAGGAAATTATTATTACACG+AGG | + | chr1.1:66313509-66313528 | None:intergenic | 25.0% |
| ! | TCAAAGGCAAAAAATTCATA+AGG | + | chr1.1:66311391-66311410 | None:intergenic | 25.0% |
| ! | TTATTAAGTAGCAATGACTA+AGG | + | chr1.1:66312770-66312789 | None:intergenic | 25.0% |
| ! | TTATTCACTAAATTCACCAT+TGG | + | chr1.1:66313452-66313471 | None:intergenic | 25.0% |
| ! | TTCATTCATAAATTCGACAT+TGG | + | chr1.1:66313558-66313577 | None:intergenic | 25.0% |
| ! | TTTAATGTTATTCAGAGATG+GGG | - | chr1.1:66311353-66311372 | MS.gene68104:CDS | 25.0% |
| ! | TTTCTATTTCCATGTTATAC+AGG | - | chr1.1:66314023-66314042 | MS.gene68104:intron | 25.0% |
| !! | ATCAGTAGTGTTATTAATAG+CGG | + | chr1.1:66310566-66310585 | None:intergenic | 25.0% |
| !! | TACAGCAATTTACTCATTTT+TGG | - | chr1.1:66312368-66312387 | MS.gene68104:intron | 25.0% |
| !! | TCTTTGATGGAAAGTTTTTA+AGG | - | chr1.1:66309424-66309443 | MS.gene68104:intron | 25.0% |
| !! | TGATTCTAGAAAACAAAATG+TGG | - | chr1.1:66312883-66312902 | MS.gene68104:intron | 25.0% |
| !! | TTATCATGTTTTGTCTTGTA+TGG | - | chr1.1:66312459-66312478 | MS.gene68104:intron | 25.0% |
| !! | TTTTTAAATTGGTGTAACTG+TGG | - | chr1.1:66313228-66313247 | MS.gene68104:intron | 25.0% |
| !! | TTTTTATGGTAGTAAAGTGA+TGG | - | chr1.1:66312426-66312445 | MS.gene68104:intron | 25.0% |
| !!! | ACAGCAATTTACTCATTTTT+GGG | - | chr1.1:66312369-66312388 | MS.gene68104:intron | 25.0% |
| !!! | ATATGCTTATTTTTAGTTGC+AGG | + | chr1.1:66311286-66311305 | None:intergenic | 25.0% |
| !!! | ATGATAGTTTTAATGTCCAT+TGG | + | chr1.1:66310177-66310196 | None:intergenic | 25.0% |
| !!! | ATTTGATAGCAGATGTTTTA+CGG | - | chr1.1:66313997-66314016 | MS.gene68104:intron | 25.0% |
| !!! | ATTTTCTTTGTCAAGTTGTA+GGG | - | chr1.1:66311091-66311110 | MS.gene68104:intron | 25.0% |
| !!! | ATTTTGGTATTACGCTAAAA+AGG | - | chr1.1:66312314-66312333 | MS.gene68104:intron | 25.0% |
| !!! | GAATATGTTTTGATTTCAAG+AGG | - | chr1.1:66311194-66311213 | MS.gene68104:intron | 25.0% |
| !!! | TATGCTTATTTTTAGTTGCA+GGG | + | chr1.1:66311285-66311304 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTTCTGTTGAGTT+TGG | - | chr1.1:66309208-66309227 | MS.gene68104:intron | 25.0% |
| AAGATAAAGATATCAGACAG+AGG | - | chr1.1:66313866-66313885 | MS.gene68104:intron | 30.0% | |
| AGAAAATGAATTGTACCTGA+TGG | + | chr1.1:66311078-66311097 | None:intergenic | 30.0% | |
| AGCCAAATTAATTGATGTGA+AGG | - | chr1.1:66309135-66309154 | MS.gene68104:CDS | 30.0% | |
| AGTTCTCCATTTACATATTC+TGG | - | chr1.1:66311587-66311606 | MS.gene68104:intron | 30.0% | |
| ATACAGGAAAGTTACCATAA+CGG | - | chr1.1:66314039-66314058 | MS.gene68104:intron | 30.0% | |
| ATACTAACATGTTGGATGAT+TGG | - | chr1.1:66313058-66313077 | MS.gene68104:intron | 30.0% | |
| ATATGTAAATGGAGAACTCA+TGG | + | chr1.1:66311585-66311604 | None:intergenic | 30.0% | |
| ATGAATGGATACTAACATGT+TGG | - | chr1.1:66313050-66313069 | MS.gene68104:intron | 30.0% | |
| CCATAGTAACTATTATCTTG+AGG | + | chr1.1:66311458-66311477 | None:intergenic | 30.0% | |
| CCTCAAGATAATAGTTACTA+TGG | - | chr1.1:66311455-66311474 | MS.gene68104:intron | 30.0% | |
| GCTCCAAAGTATATAAGTAT+TGG | + | chr1.1:66311666-66311685 | None:intergenic | 30.0% | |
| GTATTTATTTAGCGCATGTT+TGG | - | chr1.1:66309461-66309480 | MS.gene68104:intron | 30.0% | |
| GTGAAAGATTGGAGTTAATT+TGG | - | chr1.1:66309311-66309330 | MS.gene68104:intron | 30.0% | |
| GTTACTATGGACAAAATGAT+AGG | - | chr1.1:66311468-66311487 | MS.gene68104:intron | 30.0% | |
| TAAAAAATGTCTTGCATTGC+GGG | - | chr1.1:66310921-66310940 | MS.gene68104:intron | 30.0% | |
| TATGAAGTGAAAAGAGAAAG+TGG | + | chr1.1:66310336-66310355 | None:intergenic | 30.0% | |
| TCGCCAATACTTATATACTT+TGG | - | chr1.1:66311660-66311679 | MS.gene68104:intron | 30.0% | |
| TCGTTATACTTGAGGAATAA+GGG | + | chr1.1:66313948-66313967 | None:intergenic | 30.0% | |
| TCTTGTAAGTATTCCTTATC+TGG | + | chr1.1:66312132-66312151 | None:intergenic | 30.0% | |
| TGAACACAAATCAATGCTTA+TGG | + | chr1.1:66309234-66309253 | None:intergenic | 30.0% | |
| TGCGCTAAATAAATACCATA+CGG | + | chr1.1:66309457-66309476 | None:intergenic | 30.0% | |
| TTAATGTTATTCAGAGATGG+GGG | - | chr1.1:66311354-66311373 | MS.gene68104:CDS | 30.0% | |
| TTATACCATGCAAAACCATT+AGG | + | chr1.1:66313785-66313804 | None:intergenic | 30.0% | |
| TTATGCAAGAATTTGATTGC+TGG | + | chr1.1:66313974-66313993 | None:intergenic | 30.0% | |
| TTCCCAAAACACAAATCAAA+AGG | + | chr1.1:66311177-66311196 | None:intergenic | 30.0% | |
| TTCGTTATACTTGAGGAATA+AGG | + | chr1.1:66313949-66313968 | None:intergenic | 30.0% | |
| ! | ACTGCAACTTTTATCTTTGA+TGG | - | chr1.1:66309411-66309430 | MS.gene68104:intron | 30.0% |
| ! | ATTATATCACTGCATTTTCC+AGG | + | chr1.1:66309876-66309895 | None:intergenic | 30.0% |
| ! | CATAGATACGATGGTTTTTA+AGG | - | chr1.1:66313095-66313114 | MS.gene68104:intron | 30.0% |
| ! | TCTTTATTTCAACTGCTTTG+TGG | - | chr1.1:66310466-66310485 | MS.gene68104:intron | 30.0% |
| ! | TTGCTTTCTTTTTAATGAGC+CGG | - | chr1.1:66311896-66311915 | MS.gene68104:intron | 30.0% |
| !! | AGTGTCATTTATTTGTTCCA+CGG | - | chr1.1:66311612-66311631 | MS.gene68104:intron | 30.0% |
| !! | CATTTTCTTTGTCAAGTTGT+AGG | - | chr1.1:66311090-66311109 | MS.gene68104:intron | 30.0% |
| !! | GCTTTATATGATTAGCTTCA+CGG | - | chr1.1:66310960-66310979 | MS.gene68104:intron | 30.0% |
| !! | TTATATGAATGCTGGTTCTT+CGG | - | chr1.1:66311224-66311243 | MS.gene68104:intron | 30.0% |
| !! | TTGTTCTGAAAGAGTAATAG+TGG | - | chr1.1:66312263-66312282 | MS.gene68104:intron | 30.0% |
| !! | TTTGATAGCAGATGTTTTAC+GGG | - | chr1.1:66313998-66314017 | MS.gene68104:intron | 30.0% |
| !! | TTTTAGGAATAATAGGTGCA+AGG | - | chr1.1:66312192-66312211 | MS.gene68104:CDS | 30.0% |
| !!! | ATGCCTTTTGATTTGTGTTT+TGG | - | chr1.1:66311171-66311190 | MS.gene68104:intron | 30.0% |
| !!! | ATGCTTATTTTTAGTTGCAG+GGG | + | chr1.1:66311284-66311303 | None:intergenic | 30.0% |
| !!! | GAGGGTATTGTCTATTTTTA+TGG | - | chr1.1:66312412-66312431 | MS.gene68104:intron | 30.0% |
| !!! | TGAATTTTTTGCCTTTGATC+AGG | - | chr1.1:66311393-66311412 | MS.gene68104:CDS | 30.0% |
| !!! | TGCCTTTTGATTTGTGTTTT+GGG | - | chr1.1:66311172-66311191 | MS.gene68104:intron | 30.0% |
| !!! | TGCGATTTTATTTTTCGTAG+TGG | - | chr1.1:66309567-66309586 | MS.gene68104:intron | 30.0% |
| !!! | TTTTAAGGTTTAATCCCGTA+TGG | - | chr1.1:66309439-66309458 | MS.gene68104:intron | 30.0% |
| !!! | TTTTCGTAGTGGATATTGAA+GGG | - | chr1.1:66309578-66309597 | MS.gene68104:intron | 30.0% |
| !!! | TTTTTCGTAGTGGATATTGA+AGG | - | chr1.1:66309577-66309596 | MS.gene68104:intron | 30.0% |
| AAAAATCACATCGGCATAAC+AGG | + | chr1.1:66308988-66309007 | None:intergenic | 35.0% | |
| AAACAGGGACTTAGGTTTAA+TGG | - | chr1.1:66309273-66309292 | MS.gene68104:intron | 35.0% | |
| AATGTACAAGAGATATTCCG+TGG | + | chr1.1:66311632-66311651 | None:intergenic | 35.0% | |
| AATTACAGACCTAATGGTAC+TGG | - | chr1.1:66312612-66312631 | MS.gene68104:intron | 35.0% | |
| ACAATCAGAAGAAAGACAGA+TGG | + | chr1.1:66311924-66311943 | None:intergenic | 35.0% | |
| AGAGAGAAAACAGATCAGAT+CGG | + | chr1.1:66308846-66308865 | None:intergenic | 35.0% | |
| AGTGTTCACAGAACTTCATA+TGG | - | chr1.1:66312935-66312954 | MS.gene68104:intron | 35.0% | |
| ATGCGATGAAAAATAACAGC+CGG | + | chr1.1:66311321-66311340 | None:intergenic | 35.0% | |
| ATTAAACCTAAGTCCCTGTT+TGG | + | chr1.1:66309274-66309293 | None:intergenic | 35.0% | |
| ATTCATTATTGCGTGACAAC+TGG | + | chr1.1:66310766-66310785 | None:intergenic | 35.0% | |
| ATTGTTCCTAATGGTTCTTG+TGG | - | chr1.1:66311026-66311045 | MS.gene68104:intron | 35.0% | |
| CAATCAGAAGAAAGACAGAT+GGG | + | chr1.1:66311923-66311942 | None:intergenic | 35.0% | |
| CACTGACCAGAATATGTAAA+TGG | + | chr1.1:66311596-66311615 | None:intergenic | 35.0% | |
| CTATACCGCTATTATGTATC+GGG | - | chr1.1:66310015-66310034 | MS.gene68104:intron | 35.0% | |
| CTCATGGAATGTGAATAATG+AGG | + | chr1.1:66311569-66311588 | None:intergenic | 35.0% | |
| CTGAAAGAGTAATAGTGGTA+AGG | - | chr1.1:66312268-66312287 | MS.gene68104:intron | 35.0% | |
| GAAATCCCGATACATAATAG+CGG | + | chr1.1:66310023-66310042 | None:intergenic | 35.0% | |
| GAGATAGATATACCTTGTGA+AGG | + | chr1.1:66308821-66308840 | None:intergenic | 35.0% | |
| GATACATAATAGCGGTATAG+CGG | + | chr1.1:66310015-66310034 | None:intergenic | 35.0% | |
| GCGCTAAATAAATACCATAC+GGG | + | chr1.1:66309456-66309475 | None:intergenic | 35.0% | |
| GCTATACCGCTATTATGTAT+CGG | - | chr1.1:66310014-66310033 | MS.gene68104:intron | 35.0% | |
| GGTAACTTTCCTGTATAACA+TGG | + | chr1.1:66314035-66314054 | None:intergenic | 35.0% | |
| GTTGTCTCTTATATGAATGC+TGG | - | chr1.1:66311216-66311235 | MS.gene68104:intron | 35.0% | |
| TAACATGTTGGATGATTGGA+AGG | - | chr1.1:66313062-66313081 | MS.gene68104:intron | 35.0% | |
| TACAGGAAAGTTACCATAAC+GGG | - | chr1.1:66314040-66314059 | MS.gene68104:intron | 35.0% | |
| TACTCTTTCAGAACAACAAC+CGG | + | chr1.1:66312259-66312278 | None:intergenic | 35.0% | |
| TAGAAAAGCCAACGTATGTT+AGG | - | chr1.1:66310651-66310670 | MS.gene68104:intron | 35.0% | |
| TAGGGATCTGTTACTACATT+TGG | - | chr1.1:66313344-66313363 | MS.gene68104:intron | 35.0% | |
| TATACTTGAGGAATAAGGGA+AGG | + | chr1.1:66313944-66313963 | None:intergenic | 35.0% | |
| TATCAGATATTAGTCAGGTC+AGG | - | chr1.1:66313749-66313768 | MS.gene68104:intron | 35.0% | |
| TCAATGAATGACCTGATCAA+AGG | + | chr1.1:66311407-66311426 | None:intergenic | 35.0% | |
| TCTCTCTCTGTAATGTACAT+AGG | - | chr1.1:66308859-66308878 | MS.gene68104:intron | 35.0% | |
| TGAATCTATGATACTGCAGA+AGG | - | chr1.1:66314087-66314106 | MS.gene68104:CDS | 35.0% | |
| TTATACATCAGGGACAGTAA+TGG | - | chr1.1:66311953-66311972 | MS.gene68104:intron | 35.0% | |
| TTCATTGAAGAATCTCAAGC+TGG | - | chr1.1:66311419-66311438 | MS.gene68104:CDS | 35.0% | |
| TTTCAACGTGTAACCAAACA+GGG | - | chr1.1:66309258-66309277 | MS.gene68104:intron | 35.0% | |
| TTTCACTTTACCTAGGTCTT+GGG | + | chr1.1:66310282-66310301 | None:intergenic | 35.0% | |
| ! | ACATATCTGGAACAACTGAT+AGG | - | chr1.1:66313894-66313913 | MS.gene68104:intron | 35.0% |
| ! | CATTTCGTTTTCACCAGATA+AGG | - | chr1.1:66312116-66312135 | MS.gene68104:CDS | 35.0% |
| ! | GATGGAAGCACATATGTATA+TGG | + | chr1.1:66312564-66312583 | None:intergenic | 35.0% |
| ! | GCGAGCATTGTAAAGAATTA+GGG | + | chr1.1:66308904-66308923 | None:intergenic | 35.0% |
| ! | GTTCTTGTGGTGGAATAATT+GGG | - | chr1.1:66311039-66311058 | MS.gene68104:intron | 35.0% |
| ! | TAAGCTTTTGTGTTAGTGAG+AGG | - | chr1.1:66309713-66309732 | MS.gene68104:intron | 35.0% |
| ! | TCAGAGCTTTTATATCCCTA+TGG | - | chr1.1:66311249-66311268 | MS.gene68104:intron | 35.0% |
| ! | TGCTTTCTTTTTAATGAGCC+GGG | - | chr1.1:66311897-66311916 | MS.gene68104:intron | 35.0% |
| ! | TTTTCAACGTGTAACCAAAC+AGG | - | chr1.1:66309257-66309276 | MS.gene68104:intron | 35.0% |
| ! | TTTTCACTTTACCTAGGTCT+TGG | + | chr1.1:66310283-66310302 | None:intergenic | 35.0% |
| ! | TTTTTGCATATCGGAGATAG+CGG | - | chr1.1:66310105-66310124 | MS.gene68104:intron | 35.0% |
| ! | TTTTTGCTCTTTCAGACTAG+TGG | - | chr1.1:66313839-66313858 | MS.gene68104:intron | 35.0% |
| !! | AAAGAGTTTTAGTGATCGAG+AGG | + | chr1.1:66310306-66310325 | None:intergenic | 35.0% |
| !! | ACTGATTTTCAGTCACAATC+TGG | - | chr1.1:66310731-66310750 | MS.gene68104:intron | 35.0% |
| !! | ATACTTTGGAGCACCTAATA+TGG | - | chr1.1:66311674-66311693 | MS.gene68104:intron | 35.0% |
| !! | ATTTTAGGTGCTTATGTCTC+GGG | - | chr1.1:66312525-66312544 | MS.gene68104:intron | 35.0% |
| !! | CATTTTAGGTGCTTATGTCT+CGG | - | chr1.1:66312524-66312543 | MS.gene68104:intron | 35.0% |
| !! | TCTTGGTGATAGTGTGATTT+TGG | - | chr1.1:66312298-66312317 | MS.gene68104:intron | 35.0% |
| !!! | ATGAGTCTCACTTTGGTTTT+TGG | + | chr1.1:66311008-66311027 | None:intergenic | 35.0% |
| !!! | TATTTCCCATAGCGGATTTT+TGG | - | chr1.1:66310519-66310538 | MS.gene68104:intron | 35.0% |
| AAAGAAGACTGTAATCCCAG+GGG | + | chr1.1:66311770-66311789 | None:intergenic | 40.0% | |
| AAATCCGCTATGGGAAATAG+CGG | + | chr1.1:66310518-66310537 | None:intergenic | 40.0% | |
| AACCACTGATCGGATTATCA+TGG | - | chr1.1:66310796-66310815 | MS.gene68104:intron | 40.0% | |
| AACTTTGCTCCAGTACCATT+AGG | + | chr1.1:66312624-66312643 | None:intergenic | 40.0% | |
| AAGGTGATGCATAGATACGA+TGG | - | chr1.1:66313086-66313105 | MS.gene68104:intron | 40.0% | |
| ACATGGATAATCGGTGTAGT+TGG | + | chr1.1:66309971-66309990 | None:intergenic | 40.0% | |
| ACCAGAAACCTAACATACGT+TGG | + | chr1.1:66310662-66310681 | None:intergenic | 40.0% | |
| ACTAAATCTTGAACCAGCAC+AGG | + | chr1.1:66313308-66313327 | None:intergenic | 40.0% | |
| AGCAAGATCACAATACCGTA+TGG | + | chr1.1:66310065-66310084 | None:intergenic | 40.0% | |
| AGCATATGTTATTGTCAGGC+CGG | - | chr1.1:66311299-66311318 | MS.gene68104:CDS | 40.0% | |
| AGCGGTTATTGCTTACATAG+CGG | - | chr1.1:66310123-66310142 | MS.gene68104:intron | 40.0% | |
| AGGAACAATGAGTCTCACTT+TGG | + | chr1.1:66311015-66311034 | None:intergenic | 40.0% | |
| AGTGAAAAGAGAAAGTGGAG+AGG | + | chr1.1:66310331-66310350 | None:intergenic | 40.0% | |
| AGTGGTAAGGATCATACTCT+TGG | - | chr1.1:66312281-66312300 | MS.gene68104:intron | 40.0% | |
| ATACCTTGTGAAGGTGAATC+AGG | + | chr1.1:66308812-66308831 | None:intergenic | 40.0% | |
| ATTCATGCATCCACGTGTAA+TGG | - | chr1.1:66313599-66313618 | MS.gene68104:intron | 40.0% | |
| ATTCCACCACAAGAACCATT+AGG | + | chr1.1:66311035-66311054 | None:intergenic | 40.0% | |
| CACAAATGTGTGAAGTGTGA+AGG | + | chr1.1:66309747-66309766 | None:intergenic | 40.0% | |
| CATGCAAAACCATTAGGCAT+TGG | + | chr1.1:66313779-66313798 | None:intergenic | 40.0% | |
| CATGTGCCAAAAACACAAAC+TGG | + | chr1.1:66313004-66313023 | None:intergenic | 40.0% | |
| CCATACATAAACAGGGCTAA+TGG | + | chr1.1:66311746-66311765 | None:intergenic | 40.0% | |
| CCATTAGCCCTGTTTATGTA+TGG | - | chr1.1:66311743-66311762 | MS.gene68104:intron | 40.0% | |
| CGCAATAATGAATTCTTCCC+TGG | - | chr1.1:66310773-66310792 | MS.gene68104:intron | 40.0% | |
| CTCCGATATGCAAAAATCCA+CGG | + | chr1.1:66310101-66310120 | None:intergenic | 40.0% | |
| CTCTTGACATTTCACATGAC+AGG | - | chr1.1:66313269-66313288 | MS.gene68104:intron | 40.0% | |
| CTGATATATTTGACCTGTGC+TGG | - | chr1.1:66313292-66313311 | MS.gene68104:intron | 40.0% | |
| GAAAGAAGACTGTAATCCCA+GGG | + | chr1.1:66311771-66311790 | None:intergenic | 40.0% | |
| GATAGGATAGTAACAGTGAC+AGG | - | chr1.1:66311485-66311504 | MS.gene68104:intron | 40.0% | |
| GATCACCAAAAATCCGCTAT+GGG | + | chr1.1:66310527-66310546 | None:intergenic | 40.0% | |
| GATCGGATTATCATGGTATC+TGG | - | chr1.1:66310803-66310822 | MS.gene68104:intron | 40.0% | |
| GATGACACGTAAGAAGATTC+AGG | + | chr1.1:66308752-66308771 | None:intergenic | 40.0% | |
| GCAAGATCACAATACCGTAT+GGG | + | chr1.1:66310064-66310083 | None:intergenic | 40.0% | |
| GGAGTGAATTACAGACCTAA+TGG | - | chr1.1:66312606-66312625 | MS.gene68104:intron | 40.0% | |
| GTATTACGCTAAAAAGGTCG+AGG | - | chr1.1:66312320-66312339 | MS.gene68104:intron | 40.0% | |
| GTGAGACTCATTGTTCCTAA+TGG | - | chr1.1:66311017-66311036 | MS.gene68104:intron | 40.0% | |
| TAAAGGGGAATGTAGAGACA+GGG | - | chr1.1:66312857-66312876 | MS.gene68104:intron | 40.0% | |
| TAATTCACTCCGTTGTATGC+TGG | + | chr1.1:66312597-66312616 | None:intergenic | 40.0% | |
| TACATAAACAGGGCTAATGG+AGG | + | chr1.1:66311743-66311762 | None:intergenic | 40.0% | |
| TACCATGATAATCCGATCAG+TGG | + | chr1.1:66310801-66310820 | None:intergenic | 40.0% | |
| TACCTTCACAGAGATACACA+CGG | + | chr1.1:66312038-66312057 | None:intergenic | 40.0% | |
| TATTATTACACGAGGACGCA+TGG | + | chr1.1:66313501-66313520 | None:intergenic | 40.0% | |
| TCAGGTTTACCAATGCCTAA+TGG | - | chr1.1:66313767-66313786 | MS.gene68104:intron | 40.0% | |
| TCGAGGCCCAATACTAATTA+TGG | - | chr1.1:66312337-66312356 | MS.gene68104:intron | 40.0% | |
| TCTTTCAAAGTTGCTCAGTG+AGG | - | chr1.1:66310862-66310881 | MS.gene68104:intron | 40.0% | |
| TGAAAGAAGACTGTAATCCC+AGG | + | chr1.1:66311772-66311791 | None:intergenic | 40.0% | |
| TGCAGATGAGCATATAGGAT+TGG | - | chr1.1:66313702-66313721 | MS.gene68104:intron | 40.0% | |
| TGTGTGTGTGTTTGAAAGCT+TGG | + | chr1.1:66312715-66312734 | None:intergenic | 40.0% | |
| TGTTGGATGATTGGAAGGAA+AGG | - | chr1.1:66313067-66313086 | MS.gene68104:intron | 40.0% | |
| TTAGGGCAAGCAACATTACA+AGG | + | chr1.1:66313195-66313214 | None:intergenic | 40.0% | |
| TTCACTTTACCTAGGTCTTG+GGG | + | chr1.1:66310281-66310300 | None:intergenic | 40.0% | |
| ! | AGCCGTGGATTTTTGCATAT+CGG | - | chr1.1:66310096-66310115 | MS.gene68104:intron | 40.0% |
| ! | AGGTTGCCAGTTTGTGTTTT+TGG | - | chr1.1:66312995-66313014 | MS.gene68104:intron | 40.0% |
| ! | CATATCCTTTGTTGTCTTCC+AGG | - | chr1.1:66313648-66313667 | MS.gene68104:intron | 40.0% |
| ! | CGCGAGCATTGTAAAGAATT+AGG | + | chr1.1:66308905-66308924 | None:intergenic | 40.0% |
| ! | GAGAGGTTTTCACTTTACCT+AGG | + | chr1.1:66310289-66310308 | None:intergenic | 40.0% |
| ! | GGTTCTTGTGGTGGAATAAT+TGG | - | chr1.1:66311038-66311057 | MS.gene68104:intron | 40.0% |
| ! | GTACAAAAGTACGTTGTTCC+TGG | - | chr1.1:66309855-66309874 | MS.gene68104:intron | 40.0% |
| ! | TAGCGGATCGTGGAAAATAT+CGG | + | chr1.1:66310549-66310568 | None:intergenic | 40.0% |
| ! | TGTGGTGGAATAATTGGGAA+GGG | - | chr1.1:66311044-66311063 | MS.gene68104:intron | 40.0% |
| ! | TTGGTATCACAGTGAGTTGA+CGG | - | chr1.1:66309480-66309499 | MS.gene68104:intron | 40.0% |
| ! | TTGTGGTGGAATAATTGGGA+AGG | - | chr1.1:66311043-66311062 | MS.gene68104:intron | 40.0% |
| !! | AATCACGGGTGTTACTCAAA+TGG | + | chr1.1:66312087-66312106 | None:intergenic | 40.0% |
| !! | CAATGCCTAATGGTTTTGCA+TGG | - | chr1.1:66313777-66313796 | MS.gene68104:intron | 40.0% |
| !! | GAGCATATAGGATTGGTTGT+TGG | - | chr1.1:66313709-66313728 | MS.gene68104:intron | 40.0% |
| !! | GCTGGTTCTGTTATTGGAAA+GGG | - | chr1.1:66310695-66310714 | MS.gene68104:intron | 40.0% |
| !! | GTGTTATTAATAGCGGATCG+TGG | + | chr1.1:66310559-66310578 | None:intergenic | 40.0% |
| !! | TGCTGGTTCTGTTATTGGAA+AGG | - | chr1.1:66310694-66310713 | MS.gene68104:intron | 40.0% |
| !!! | TTGTCGTTTTCTTGCTTGCT+AGG | - | chr1.1:66309783-66309802 | MS.gene68104:intron | 40.0% |
| AAAATCCACGGCTATTGCAG+CGG | + | chr1.1:66310089-66310108 | None:intergenic | 45.0% | |
| ACAAACACGCCGTAAGAAAC+AGG | + | chr1.1:66309193-66309212 | None:intergenic | 45.0% | |
| ACGTGCACACACTTAGAGTT+GGG | - | chr1.1:66309518-66309537 | MS.gene68104:intron | 45.0% | |
| ACTATCATGTGAGCTGCACA+TGG | - | chr1.1:66310189-66310208 | MS.gene68104:intron | 45.0% | |
| AGCAAAGTTCCAGAACAGCA+AGG | - | chr1.1:66312635-66312654 | MS.gene68104:intron | 45.0% | |
| AGTAACAGTGACAGGAACTC+TGG | - | chr1.1:66311493-66311512 | MS.gene68104:intron | 45.0% | |
| ATAATCCGATCAGTGGTTCC+AGG | + | chr1.1:66310794-66310813 | None:intergenic | 45.0% | |
| ATCCGTGTGTATCTCTGTGA+AGG | - | chr1.1:66312033-66312052 | MS.gene68104:CDS | 45.0% | |
| ATCCTCCTGGAAGACAACAA+AGG | + | chr1.1:66313656-66313675 | None:intergenic | 45.0% | |
| ATCGCAGAGAGCAATTCGTA+CGG | - | chr1.1:66314063-66314082 | MS.gene68104:CDS | 45.0% | |
| ATGCTCATCTGCAACACCAA+TGG | + | chr1.1:66313695-66313714 | None:intergenic | 45.0% | |
| ATGCTGAATCGGTGATGAGA+TGG | - | chr1.1:66310242-66310261 | MS.gene68104:CDS | 45.0% | |
| CAGGGGTCCATACATAAACA+GGG | + | chr1.1:66311753-66311772 | None:intergenic | 45.0% | |
| CATCAGGGACAGTAATGGTA+AGG | - | chr1.1:66311958-66311977 | MS.gene68104:intron | 45.0% | |
| CCCACTTAGTGAGAAAAGAC+CGG | - | chr1.1:66312237-66312256 | MS.gene68104:intron | 45.0% | |
| CGAAGCAACTCAATGACCAT+TGG | - | chr1.1:66313676-66313695 | MS.gene68104:intron | 45.0% | |
| CTAAAGGGGAATGTAGAGAC+AGG | - | chr1.1:66312856-66312875 | MS.gene68104:intron | 45.0% | |
| CTACTGCCTTCGTCCATATT+AGG | + | chr1.1:66311690-66311709 | None:intergenic | 45.0% | |
| CTGATATATTCCTTCCACCG+CGG | + | chr1.1:66313735-66313754 | None:intergenic | 45.0% | |
| CTGTTTATGTATGGACCCCT+GGG | - | chr1.1:66311752-66311771 | MS.gene68104:intron | 45.0% | |
| GACAGAGGCGATTACATATC+TGG | - | chr1.1:66313881-66313900 | MS.gene68104:intron | 45.0% | |
| GCCAACGTATGTTAGGTTTC+TGG | - | chr1.1:66310658-66310677 | MS.gene68104:intron | 45.0% | |
| GCTTATGTCTCGGGTTATCA+GGG | - | chr1.1:66312534-66312553 | MS.gene68104:intron | 45.0% | |
| GGATCACCAAAAATCCGCTA+TGG | + | chr1.1:66310528-66310547 | None:intergenic | 45.0% | |
| GGTTCTGTTATTGGAAAGGG+TGG | - | chr1.1:66310698-66310717 | MS.gene68104:intron | 45.0% | |
| GTGTAACCAAACAGGGACTT+AGG | - | chr1.1:66309265-66309284 | MS.gene68104:intron | 45.0% | |
| GTTCCTAATGGTTCTTGTGG+TGG | - | chr1.1:66311029-66311048 | MS.gene68104:intron | 45.0% | |
| TAATCCGATCAGTGGTTCCA+GGG | + | chr1.1:66310793-66310812 | None:intergenic | 45.0% | |
| TCTTACGTGTCATCTCCAGA+AGG | - | chr1.1:66308758-66308777 | MS.gene68104:CDS | 45.0% | |
| TCTTCTTTCACCTTCGTTGC+AGG | - | chr1.1:66311782-66311801 | MS.gene68104:intron | 45.0% | |
| TGCTGAATCGGTGATGAGAT+GGG | - | chr1.1:66310243-66310262 | MS.gene68104:CDS | 45.0% | |
| TGCTTATGTCTCGGGTTATC+AGG | - | chr1.1:66312533-66312552 | MS.gene68104:intron | 45.0% | |
| ! | ACCGGTCTTTTCTCACTAAG+TGG | + | chr1.1:66312241-66312260 | None:intergenic | 45.0% |
| ! | ATCCTTTGTTGTCTTCCAGG+AGG | - | chr1.1:66313651-66313670 | MS.gene68104:intron | 45.0% |
| ! | CCGGTCTTTTCTCACTAAGT+GGG | + | chr1.1:66312240-66312259 | None:intergenic | 45.0% |
| ! | CGGTCTTTTCTCACTAAGTG+GGG | + | chr1.1:66312239-66312258 | None:intergenic | 45.0% |
| ! | CTATCCGCTATTTCCCATAG+CGG | - | chr1.1:66310511-66310530 | MS.gene68104:intron | 45.0% |
| ! | CTTTTCTCACTAAGTGGGGT+CGG | + | chr1.1:66312235-66312254 | None:intergenic | 45.0% |
| ! | GGTGTTGCAGATGAGCATAT+AGG | - | chr1.1:66313697-66313716 | MS.gene68104:intron | 45.0% |
| ! | TGGTATCACAGTGAGTTGAC+GGG | - | chr1.1:66309481-66309500 | MS.gene68104:intron | 45.0% |
| ! | TTTAGTTGCAGGGGAAGCAT+AGG | + | chr1.1:66311275-66311294 | None:intergenic | 45.0% |
| !! | ATATGATTAGCTTCACGGCG+AGG | - | chr1.1:66310965-66310984 | MS.gene68104:intron | 45.0% |
| !! | GAAATAGCGGATAGTGTAGC+AGG | + | chr1.1:66310505-66310524 | None:intergenic | 45.0% |
| !! | GCTGGCTTTCGTTATACTTG+AGG | + | chr1.1:66313956-66313975 | None:intergenic | 45.0% |
| !! | TCTGCTGCTGGTTCTGTTAT+TGG | - | chr1.1:66310689-66310708 | MS.gene68104:intron | 45.0% |
| !! | TGAGGAAAACCTTGCTGTTC+TGG | + | chr1.1:66312647-66312666 | None:intergenic | 45.0% |
| !!! | TTGTTATTAAATATAAAATA+TGG | - | chr1.1:66309634-66309653 | MS.gene68104:intron | 5.0% |
| AACCGCGACGAAATCCCATA+CGG | - | chr1.1:66310047-66310066 | MS.gene68104:intron | 50.0% | |
| ACTAAGTGGGGTCGGTTACA+TGG | + | chr1.1:66312227-66312246 | None:intergenic | 50.0% | |
| AGAAGAAAGACAGATGGGCC+CGG | + | chr1.1:66311918-66311937 | None:intergenic | 50.0% | |
| CAACTCTAAGTGTGTGCACG+TGG | + | chr1.1:66309519-66309538 | None:intergenic | 50.0% | |
| CACGTGCACACACTTAGAGT+TGG | - | chr1.1:66309517-66309536 | MS.gene68104:intron | 50.0% | |
| CCAGGGGTCCATACATAAAC+AGG | + | chr1.1:66311754-66311773 | None:intergenic | 50.0% | |
| CCTCCTGATTCACCTTCACA+AGG | - | chr1.1:66308806-66308825 | MS.gene68104:CDS | 50.0% | |
| CCTGTTTATGTATGGACCCC+TGG | - | chr1.1:66311751-66311770 | MS.gene68104:intron | 50.0% | |
| CCTTGTGAAGGTGAATCAGG+AGG | + | chr1.1:66308809-66308828 | None:intergenic | 50.0% | |
| CGTATGTAACCCCAAGACCT+AGG | - | chr1.1:66310269-66310288 | MS.gene68104:CDS | 50.0% | |
| CGTTGCAGGAAGGAAGTAGA+TGG | - | chr1.1:66311796-66311815 | MS.gene68104:intron | 50.0% | |
| CTAAGTGGGGTCGGTTACAT+GGG | + | chr1.1:66312226-66312245 | None:intergenic | 50.0% | |
| CTACTTCCTTCCTGCAACGA+AGG | + | chr1.1:66311795-66311814 | None:intergenic | 50.0% | |
| CTGAATCGGTGATGAGATGG+GGG | - | chr1.1:66310245-66310264 | MS.gene68104:CDS | 50.0% | |
| CTGGTATCAAACTCTGCTGC+TGG | - | chr1.1:66310677-66310696 | MS.gene68104:intron | 50.0% | |
| CTTTCACCTTCGTTGCAGGA+AGG | - | chr1.1:66311786-66311805 | MS.gene68104:intron | 50.0% | |
| GAGCGAATCACCATTACACG+TGG | + | chr1.1:66313612-66313631 | None:intergenic | 50.0% | |
| GCTGAATCGGTGATGAGATG+GGG | - | chr1.1:66310244-66310263 | MS.gene68104:CDS | 50.0% | |
| GGTGGAATAATTGGGAAGGG+AGG | - | chr1.1:66311047-66311066 | MS.gene68104:intron | 50.0% | |
| GTTGCACCACCAGCATACAA+CGG | - | chr1.1:66312585-66312604 | MS.gene68104:intron | 50.0% | |
| TACCGTATGGGATTTCGTCG+CGG | + | chr1.1:66310052-66310071 | None:intergenic | 50.0% | |
| TCTTCCCTGGAACCACTGAT+CGG | - | chr1.1:66310786-66310805 | MS.gene68104:intron | 50.0% | |
| TGCAGGAAGGAAGTAGATGG+AGG | - | chr1.1:66311799-66311818 | MS.gene68104:CDS | 50.0% | |
| TGCTTATGCTACCGAGAGAG+TGG | - | chr1.1:66314111-66314130 | MS.gene68104:CDS | 50.0% | |
| TGTGAAGGTGAATCAGGAGG+AGG | + | chr1.1:66308806-66308825 | None:intergenic | 50.0% | |
| TTCACTCCGTTGTATGCTGG+TGG | + | chr1.1:66312594-66312613 | None:intergenic | 50.0% | |
| ! | CAGTGAGTTGACGGGAATCA+CGG | - | chr1.1:66309489-66309508 | MS.gene68104:intron | 50.0% |
| ! | GGAGCACCTAATATGGACGA+AGG | - | chr1.1:66311681-66311700 | MS.gene68104:intron | 50.0% |
| ! | TATGCTGGTGGTGCAACAGA+TGG | + | chr1.1:66312582-66312601 | None:intergenic | 50.0% |
| ! | TTGAGTTGCTTCGATCCTCC+TGG | + | chr1.1:66313669-66313688 | None:intergenic | 50.0% |
| !! | ATAGGATTGGTTGTTGGCCG+CGG | - | chr1.1:66313715-66313734 | MS.gene68104:intron | 50.0% |
| ACTCTGGATGAGCAGATGCG+TGG | - | chr1.1:66311509-66311528 | MS.gene68104:intron | 55.0% | |
| TGCTCTCTGCGATCCCGTTA+TGG | + | chr1.1:66314056-66314075 | None:intergenic | 55.0% | |
| TGTCATCTCCAGAAGGACCG+AGG | - | chr1.1:66308765-66308784 | MS.gene68104:CDS | 55.0% | |
| ! | CAGGGGAAGCATAGGCCATA+GGG | + | chr1.1:66311267-66311286 | None:intergenic | 55.0% |
| ! | GGTGAAGAAGCGTGCTTCCT+CGG | + | chr1.1:66308785-66308804 | None:intergenic | 55.0% |
| TGCTACCGCTGCAATAGCCG+TGG | - | chr1.1:66310081-66310100 | MS.gene68104:intron | 60.0% | |
| ! | GCAGGGGAAGCATAGGCCAT+AGG | + | chr1.1:66311268-66311287 | None:intergenic | 60.0% |
| !! | GGAAGGGAGGTGCTACCATC+AGG | - | chr1.1:66311060-66311079 | MS.gene68104:intron | 60.0% |
| GCGTGCTTCCTCGGTCCTTC+TGG | + | chr1.1:66308776-66308795 | None:intergenic | 65.0% | |
| TGGTTGTTGGCCGCGGTGGA+AGG | - | chr1.1:66313722-66313741 | MS.gene68104:intron | 65.0% | |
| !! | GGATTGGTTGTTGGCCGCGG+TGG | - | chr1.1:66313718-66313737 | MS.gene68104:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 66308740 | 66314138 | 66308740 | ID=MS.gene68104 |
| chr1.1 | mRNA | 66308740 | 66314138 | 66308740 | ID=MS.gene68104.t1;Parent=MS.gene68104 |
| chr1.1 | exon | 66314051 | 66314138 | 66314051 | ID=MS.gene68104.t1.exon1;Parent=MS.gene68104.t1 |
| chr1.1 | CDS | 66314051 | 66314138 | 66314051 | ID=cds.MS.gene68104.t1;Parent=MS.gene68104.t1 |
| chr1.1 | exon | 66311995 | 66312233 | 66311995 | ID=MS.gene68104.t1.exon2;Parent=MS.gene68104.t1 |
| chr1.1 | CDS | 66311995 | 66312233 | 66311995 | ID=cds.MS.gene68104.t1;Parent=MS.gene68104.t1 |
| chr1.1 | exon | 66311797 | 66311903 | 66311797 | ID=MS.gene68104.t1.exon3;Parent=MS.gene68104.t1 |
| chr1.1 | CDS | 66311797 | 66311903 | 66311797 | ID=cds.MS.gene68104.t1;Parent=MS.gene68104.t1 |
| chr1.1 | exon | 66311270 | 66311463 | 66311270 | ID=MS.gene68104.t1.exon4;Parent=MS.gene68104.t1 |
| chr1.1 | CDS | 66311270 | 66311463 | 66311270 | ID=cds.MS.gene68104.t1;Parent=MS.gene68104.t1 |
| chr1.1 | exon | 66310222 | 66310346 | 66310222 | ID=MS.gene68104.t1.exon5;Parent=MS.gene68104.t1 |
| chr1.1 | CDS | 66310222 | 66310346 | 66310222 | ID=cds.MS.gene68104.t1;Parent=MS.gene68104.t1 |
| chr1.1 | exon | 66309113 | 66309208 | 66309113 | ID=MS.gene68104.t1.exon6;Parent=MS.gene68104.t1 |
| chr1.1 | CDS | 66309113 | 66309208 | 66309113 | ID=cds.MS.gene68104.t1;Parent=MS.gene68104.t1 |
| chr1.1 | exon | 66308963 | 66309024 | 66308963 | ID=MS.gene68104.t1.exon7;Parent=MS.gene68104.t1 |
| chr1.1 | CDS | 66308963 | 66309024 | 66308963 | ID=cds.MS.gene68104.t1;Parent=MS.gene68104.t1 |
| chr1.1 | exon | 66308740 | 66308833 | 66308740 | ID=MS.gene68104.t1.exon8;Parent=MS.gene68104.t1 |
| chr1.1 | CDS | 66308740 | 66308833 | 66308740 | ID=cds.MS.gene68104.t1;Parent=MS.gene68104.t1 |
| Gene Sequence |
| Protein sequence |
