Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053786.t1 | XP_003614713.1 | 95.8 | 212 | 8 | 1 | 1 | 211 | 1 | 212 | 3.50E-108 | 401 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053786.t1 | Q6IDL4 | 62.0 | 205 | 75 | 2 | 10 | 211 | 13 | 217 | 1.8e-68 | 260.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053786.t1 | G7JXB5 | 95.8 | 212 | 8 | 1 | 1 | 211 | 1 | 212 | 2.5e-108 | 401.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050838 | MS.gene053786 | 0.831767 | 1.39E-55 | -1.69E-46 |
| MS.gene051003 | MS.gene053786 | 0.824693 | 7.03E-54 | -1.69E-46 |
| MS.gene051233 | MS.gene053786 | 0.800672 | 1.29E-48 | -1.69E-46 |
| MS.gene051234 | MS.gene053786 | 0.816424 | 5.57E-52 | -1.69E-46 |
| MS.gene051343 | MS.gene053786 | 0.804764 | 1.85E-49 | -1.69E-46 |
| MS.gene05188 | MS.gene053786 | 0.80007 | 1.71E-48 | -1.69E-46 |
| MS.gene051902 | MS.gene053786 | 0.803691 | 3.09E-49 | -1.69E-46 |
| MS.gene052296 | MS.gene053786 | 0.807687 | 4.48E-50 | -1.69E-46 |
| MS.gene053058 | MS.gene053786 | 0.807994 | 3.85E-50 | -1.69E-46 |
| MS.gene053295 | MS.gene053786 | 0.801834 | 7.47E-49 | -1.69E-46 |
| MS.gene053298 | MS.gene053786 | 0.802555 | 5.31E-49 | -1.69E-46 |
| MS.gene053564 | MS.gene053786 | 0.822563 | 2.22E-53 | -1.69E-46 |
| MS.gene053786 | MS.gene053895 | -0.816347 | 5.80E-52 | -1.69E-46 |
| MS.gene053786 | MS.gene055513 | 0.829174 | 5.97E-55 | -1.69E-46 |
| MS.gene053786 | MS.gene056181 | 0.801553 | 8.53E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene056403 | 0.804358 | 2.24E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene059146 | 0.808045 | 3.76E-50 | -1.69E-46 |
| MS.gene053786 | MS.gene059170 | 0.813043 | 3.13E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene059171 | 0.803235 | 3.84E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene06011 | 0.824237 | 9.00E-54 | -1.69E-46 |
| MS.gene053786 | MS.gene060763 | 0.825929 | 3.58E-54 | -1.69E-46 |
| MS.gene053786 | MS.gene061100 | 0.816358 | 5.76E-52 | -1.69E-46 |
| MS.gene053786 | MS.gene06131 | 0.815513 | 8.90E-52 | -1.69E-46 |
| MS.gene053786 | MS.gene061707 | 0.807135 | 5.86E-50 | -1.69E-46 |
| MS.gene053786 | MS.gene061878 | 0.811197 | 7.90E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene061898 | 0.841678 | 4.11E-58 | -1.69E-46 |
| MS.gene053786 | MS.gene064771 | 0.816955 | 4.23E-52 | -1.69E-46 |
| MS.gene053786 | MS.gene065072 | 0.806463 | 8.13E-50 | -1.69E-46 |
| MS.gene053786 | MS.gene065159 | 0.807681 | 4.49E-50 | -1.69E-46 |
| MS.gene053786 | MS.gene066063 | 0.842693 | 2.21E-58 | -1.69E-46 |
| MS.gene053786 | MS.gene066426 | 0.80479 | 1.82E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene067158 | 0.800768 | 1.23E-48 | -1.69E-46 |
| MS.gene053786 | MS.gene067608 | 0.807235 | 5.58E-50 | -1.69E-46 |
| MS.gene053786 | MS.gene069225 | 0.804808 | 1.81E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene06984 | 0.805567 | 1.25E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene06998 | 0.806762 | 7.03E-50 | -1.69E-46 |
| MS.gene053786 | MS.gene07088 | 0.805739 | 1.15E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene071987 | 0.81668 | 4.88E-52 | -1.69E-46 |
| MS.gene053786 | MS.gene072057 | 0.814635 | 1.39E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene072328 | 0.826949 | 2.05E-54 | -1.69E-46 |
| MS.gene053786 | MS.gene072329 | 0.824839 | 6.50E-54 | -1.69E-46 |
| MS.gene053786 | MS.gene072641 | 0.838075 | 3.57E-57 | -1.69E-46 |
| MS.gene053786 | MS.gene072762 | 0.832107 | 1.14E-55 | -1.69E-46 |
| MS.gene053786 | MS.gene072969 | 0.800372 | 1.49E-48 | -1.69E-46 |
| MS.gene053786 | MS.gene07339 | 0.820811 | 5.63E-53 | -1.69E-46 |
| MS.gene053786 | MS.gene08627 | 0.800566 | 1.36E-48 | -1.69E-46 |
| MS.gene053786 | MS.gene08793 | 0.811913 | 5.52E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene08922 | 0.809965 | 1.46E-50 | -1.69E-46 |
| MS.gene053786 | MS.gene08948 | 0.81254 | 4.03E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene09295 | 0.801909 | 7.21E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene09297 | 0.80805 | 3.75E-50 | -1.69E-46 |
| MS.gene053786 | MS.gene09852 | 0.849869 | 2.45E-60 | -1.69E-46 |
| MS.gene053786 | MS.gene20886 | 0.81927 | 1.27E-52 | -1.69E-46 |
| MS.gene053786 | MS.gene20941 | 0.808923 | 2.44E-50 | -1.69E-46 |
| MS.gene053786 | MS.gene20985 | 0.803047 | 4.20E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene21103 | 0.864875 | 8.88E-65 | -1.69E-46 |
| MS.gene053786 | MS.gene21105 | 0.864392 | 1.26E-64 | -1.69E-46 |
| MS.gene053786 | MS.gene21107 | 0.863865 | 1.83E-64 | -1.69E-46 |
| MS.gene053786 | MS.gene23060 | 0.80253 | 5.37E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene23935 | 0.820358 | 7.16E-53 | -1.69E-46 |
| MS.gene053786 | MS.gene24282 | 0.803512 | 3.37E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene24285 | 0.809039 | 2.30E-50 | -1.69E-46 |
| MS.gene053786 | MS.gene25901 | 0.818322 | 2.08E-52 | -1.69E-46 |
| MS.gene053786 | MS.gene26396 | 0.800998 | 1.11E-48 | -1.69E-46 |
| MS.gene053786 | MS.gene26958 | 0.800853 | 1.19E-48 | -1.69E-46 |
| MS.gene053786 | MS.gene27073 | 0.801571 | 8.46E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene27209 | 0.803777 | 2.97E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene27318 | 0.805955 | 1.04E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene28319 | 0.800081 | 1.70E-48 | -1.69E-46 |
| MS.gene053786 | MS.gene28632 | 0.843789 | 1.13E-58 | -1.69E-46 |
| MS.gene053786 | MS.gene28979 | 0.811734 | 6.04E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene29355 | 0.842979 | 1.86E-58 | -1.69E-46 |
| MS.gene053786 | MS.gene29700 | 0.804902 | 1.73E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene29719 | 0.822724 | 2.03E-53 | -1.69E-46 |
| MS.gene053786 | MS.gene30663 | 0.832135 | 1.12E-55 | -1.69E-46 |
| MS.gene053786 | MS.gene31648 | 0.801844 | 7.43E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene32049 | 0.805514 | 1.29E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene33135 | 0.816789 | 4.61E-52 | -1.69E-46 |
| MS.gene053786 | MS.gene33250 | 0.801659 | 8.11E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene38070 | 0.800892 | 1.16E-48 | -1.69E-46 |
| MS.gene053786 | MS.gene38145 | 0.83491 | 2.28E-56 | -1.69E-46 |
| MS.gene053786 | MS.gene38262 | 0.814084 | 1.84E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene39878 | 0.80308 | 4.14E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene40220 | 0.825897 | 3.65E-54 | -1.69E-46 |
| MS.gene053786 | MS.gene40330 | 0.811783 | 5.89E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene41086 | 0.810904 | 9.14E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene41088 | 0.822554 | 2.23E-53 | -1.69E-46 |
| MS.gene053786 | MS.gene41678 | 0.820371 | 7.11E-53 | -1.69E-46 |
| MS.gene053786 | MS.gene41681 | 0.828002 | 1.15E-54 | -1.69E-46 |
| MS.gene053786 | MS.gene43202 | 0.823071 | 1.69E-53 | -1.69E-46 |
| MS.gene053786 | MS.gene44631 | 0.813525 | 2.45E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene45281 | 0.802757 | 4.82E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene45624 | 0.800616 | 1.33E-48 | -1.69E-46 |
| MS.gene053786 | MS.gene45785 | 0.820549 | 6.47E-53 | -1.69E-46 |
| MS.gene053786 | MS.gene46408 | 0.810478 | 1.13E-50 | -1.69E-46 |
| MS.gene053786 | MS.gene47581 | 0.802324 | 5.92E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene48742 | 0.806543 | 7.82E-50 | -1.69E-46 |
| MS.gene053786 | MS.gene49733 | 0.812745 | 3.63E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene49777 | 0.815599 | 8.51E-52 | -1.69E-46 |
| MS.gene053786 | MS.gene49818 | 0.802345 | 5.86E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene51920 | 0.824616 | 7.33E-54 | -1.69E-46 |
| MS.gene053786 | MS.gene52281 | 0.825462 | 4.63E-54 | -1.69E-46 |
| MS.gene053786 | MS.gene52973 | 0.80555 | 1.26E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene54547 | 0.806543 | 7.82E-50 | -1.69E-46 |
| MS.gene053786 | MS.gene54548 | 0.802692 | 4.97E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene54557 | 0.800662 | 1.30E-48 | -1.69E-46 |
| MS.gene053786 | MS.gene54766 | 0.818856 | 1.58E-52 | -1.69E-46 |
| MS.gene053786 | MS.gene55094 | 0.816643 | 4.97E-52 | -1.69E-46 |
| MS.gene053786 | MS.gene56127 | 0.801362 | 9.33E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene56163 | 0.800155 | 1.65E-48 | -1.69E-46 |
| MS.gene053786 | MS.gene56510 | 0.811412 | 7.09E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene56565 | 0.814793 | 1.29E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene56742 | 0.804525 | 2.07E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene57576 | 0.810837 | 9.45E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene57847 | 0.826458 | 2.68E-54 | -1.69E-46 |
| MS.gene053786 | MS.gene58227 | 0.831619 | 1.51E-55 | -1.69E-46 |
| MS.gene053786 | MS.gene58719 | 0.827825 | 1.26E-54 | -1.69E-46 |
| MS.gene053786 | MS.gene59241 | 0.801993 | 6.93E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene59736 | 0.803142 | 4.01E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene62834 | 0.834611 | 2.71E-56 | -1.69E-46 |
| MS.gene053786 | MS.gene63430 | 0.805412 | 1.35E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene64519 | 0.830928 | 2.23E-55 | -1.69E-46 |
| MS.gene053786 | MS.gene65711 | 0.849406 | 3.30E-60 | -1.69E-46 |
| MS.gene053786 | MS.gene67881 | 0.832837 | 7.53E-56 | -1.69E-46 |
| MS.gene053786 | MS.gene68104 | 0.812472 | 4.17E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene69097 | 0.822512 | 2.28E-53 | -1.69E-46 |
| MS.gene053786 | MS.gene70175 | 0.80526 | 1.45E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene70577 | 0.819872 | 9.25E-53 | -1.69E-46 |
| MS.gene053786 | MS.gene70596 | 0.808772 | 2.63E-50 | -1.69E-46 |
| MS.gene053786 | MS.gene71994 | 0.805465 | 1.32E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene72285 | 0.801852 | 7.41E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene72748 | 0.80171 | 7.92E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene72986 | 0.801457 | 8.92E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene73245 | 0.809999 | 1.43E-50 | -1.69E-46 |
| MS.gene053786 | MS.gene73345 | 0.802719 | 4.91E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene73825 | 0.827549 | 1.47E-54 | -1.69E-46 |
| MS.gene053786 | MS.gene74606 | 0.815596 | 8.52E-52 | -1.69E-46 |
| MS.gene053786 | MS.gene74972 | 0.802159 | 6.40E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene75412 | 0.8028 | 4.72E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene75413 | 0.815033 | 1.14E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene76248 | 0.81209 | 5.05E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene76440 | 0.81443 | 1.55E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene77361 | 0.812073 | 5.09E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene77759 | 0.820289 | 7.42E-53 | -1.69E-46 |
| MS.gene053786 | MS.gene79120 | 0.805012 | 1.64E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene79200 | 0.824955 | 6.10E-54 | -1.69E-46 |
| MS.gene053786 | MS.gene80205 | 0.80486 | 1.76E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene81288 | 0.802695 | 4.97E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene82828 | 0.809093 | 2.24E-50 | -1.69E-46 |
| MS.gene053786 | MS.gene83022 | 0.805642 | 1.21E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene85519 | 0.803716 | 3.05E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene85610 | 0.835623 | 1.51E-56 | -1.69E-46 |
| MS.gene053786 | MS.gene85978 | 0.802486 | 5.48E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene86061 | 0.825112 | 5.60E-54 | -1.69E-46 |
| MS.gene053786 | MS.gene86919 | 0.816371 | 5.72E-52 | -1.69E-46 |
| MS.gene053786 | MS.gene87622 | 0.80617 | 9.37E-50 | -1.69E-46 |
| MS.gene053786 | MS.gene87972 | 0.803333 | 3.67E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene88041 | 0.825731 | 4.00E-54 | -1.69E-46 |
| MS.gene053786 | MS.gene88859 | 0.802544 | 5.33E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene89378 | 0.807591 | 4.69E-50 | -1.69E-46 |
| MS.gene053786 | MS.gene89663 | 0.804734 | 1.87E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene89712 | 0.82074 | 5.85E-53 | -1.69E-46 |
| MS.gene053786 | MS.gene91307 | 0.803185 | 3.93E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene92390 | 0.811723 | 6.07E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene92572 | 0.805255 | 1.46E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene93155 | 0.815285 | 1.00E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene94068 | 0.88253 | 9.64E-71 | -1.69E-46 |
| MS.gene053786 | MS.gene94183 | 0.804276 | 2.33E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene94674 | 0.803474 | 3.43E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene95049 | 0.828644 | 8.02E-55 | -1.69E-46 |
| MS.gene053786 | MS.gene96690 | 0.826029 | 3.39E-54 | -1.69E-46 |
| MS.gene053786 | MS.gene98889 | 0.800441 | 1.44E-48 | -1.69E-46 |
| MS.gene053786 | MS.gene99942 | 0.832603 | 8.60E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053786.t1 | MTR_5g058140 | 91.038 | 212 | 18 | 1 | 1 | 211 | 1 | 212 | 5.75e-135 | 377 |
| MS.gene053786.t1 | MTR_3g072600 | 73.709 | 213 | 49 | 3 | 5 | 211 | 6 | 217 | 6.84e-111 | 316 |
| MS.gene053786.t1 | MTR_2g007210 | 66.832 | 202 | 65 | 2 | 12 | 211 | 5 | 206 | 1.61e-96 | 280 |
| MS.gene053786.t1 | MTR_8g088940 | 65.072 | 209 | 68 | 3 | 8 | 211 | 3 | 211 | 6.26e-88 | 258 |
| MS.gene053786.t1 | MTR_8g088980 | 71.528 | 144 | 40 | 1 | 69 | 211 | 19 | 162 | 3.88e-74 | 221 |
| MS.gene053786.t1 | MTR_4g082315 | 44.560 | 193 | 101 | 2 | 25 | 211 | 24 | 216 | 1.34e-60 | 189 |
| MS.gene053786.t1 | MTR_6g012770 | 41.758 | 182 | 99 | 3 | 37 | 211 | 31 | 212 | 9.87e-52 | 166 |
| MS.gene053786.t1 | MTR_7g011490 | 34.450 | 209 | 130 | 3 | 10 | 211 | 4 | 212 | 6.38e-47 | 154 |
| MS.gene053786.t1 | MTR_5g042260 | 34.762 | 210 | 128 | 5 | 11 | 211 | 10 | 219 | 2.45e-42 | 142 |
| MS.gene053786.t1 | MTR_5g042270 | 34.857 | 175 | 113 | 1 | 38 | 211 | 11 | 185 | 1.35e-38 | 132 |
| MS.gene053786.t1 | MTR_5g042320 | 33.175 | 211 | 131 | 5 | 11 | 211 | 13 | 223 | 2.91e-31 | 114 |
| MS.gene053786.t1 | MTR_5g042320 | 32.934 | 167 | 102 | 5 | 11 | 167 | 13 | 179 | 9.06e-21 | 86.3 |
| MS.gene053786.t1 | MTR_7g095690 | 28.502 | 207 | 135 | 4 | 7 | 207 | 5 | 204 | 1.11e-14 | 70.1 |
| MS.gene053786.t1 | MTR_1g102720 | 27.451 | 204 | 135 | 6 | 11 | 207 | 9 | 206 | 1.30e-14 | 70.1 |
| MS.gene053786.t1 | MTR_5g042300 | 30.328 | 122 | 71 | 2 | 90 | 211 | 41 | 148 | 7.33e-14 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053786.t1 | AT1G09580 | 61.951 | 205 | 75 | 2 | 10 | 211 | 13 | 217 | 1.53e-93 | 273 |
| MS.gene053786.t1 | AT1G21900 | 63.107 | 206 | 68 | 4 | 14 | 211 | 11 | 216 | 1.39e-90 | 265 |
| MS.gene053786.t1 | AT1G57620 | 60.000 | 205 | 79 | 2 | 10 | 211 | 8 | 212 | 6.53e-89 | 261 |
| MS.gene053786.t1 | AT3G10780 | 52.657 | 207 | 91 | 2 | 12 | 211 | 11 | 217 | 1.82e-67 | 206 |
| MS.gene053786.t1 | AT1G26690 | 40.191 | 209 | 114 | 2 | 14 | 211 | 6 | 214 | 3.10e-56 | 177 |
| MS.gene053786.t1 | AT1G14010 | 39.512 | 205 | 118 | 2 | 13 | 211 | 8 | 212 | 3.34e-54 | 172 |
| MS.gene053786.t1 | AT1G69460 | 38.942 | 208 | 118 | 3 | 10 | 211 | 10 | 214 | 1.61e-52 | 168 |
| MS.gene053786.t1 | AT2G03290 | 38.462 | 195 | 113 | 1 | 24 | 211 | 19 | 213 | 3.86e-49 | 159 |
| MS.gene053786.t1 | AT3G29070 | 38.144 | 194 | 114 | 2 | 24 | 211 | 32 | 225 | 1.78e-47 | 155 |
| MS.gene053786.t1 | AT2G03040 | 35.135 | 148 | 89 | 1 | 24 | 164 | 19 | 166 | 7.23e-30 | 108 |
| MS.gene053786.t1 | AT3G22845 | 25.854 | 205 | 139 | 5 | 9 | 207 | 10 | 207 | 1.39e-12 | 64.7 |
Find 37 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATTATGTGGCATGCTTT+TGG | 0.304500 | 5.1:-45183743 | MS.gene053786:CDS |
| GTCAGCCTTGATTGGAAAAC+TGG | 0.328485 | 5.1:-45183687 | MS.gene053786:CDS |
| TTGCAGGTAACATCTCCTTT+TGG | 0.356646 | 5.1:-45183831 | MS.gene053786:intron |
| CTGACACTTACACTACCTTC+TGG | 0.357413 | 5.1:+45183705 | None:intergenic |
| CGATTATCTAATTTATTTGA+AGG | 0.366207 | 5.1:-45183457 | MS.gene053786:CDS |
| TAGTTTCTGGATTGCAACTT+TGG | 0.395311 | 5.1:-45182704 | MS.gene053786:CDS |
| TGGAATTTCAGCAAAGGATT+GGG | 0.395382 | 5.1:-45183667 | MS.gene053786:CDS |
| CTGGAATTTCAGCAAAGGAT+TGG | 0.405549 | 5.1:-45183668 | MS.gene053786:CDS |
| TGGTTGACCATTCCAAGTTC+AGG | 0.407339 | 5.1:-45186292 | MS.gene053786:CDS |
| AGGGTGTTGAACTTGAAATC+AGG | 0.420862 | 5.1:-45183509 | MS.gene053786:CDS |
| ACACATTTAGTTCCTGAACT+TGG | 0.421337 | 5.1:+45186280 | None:intergenic |
| TGGTGAACGTTGTTTCCAAA+AGG | 0.464734 | 5.1:+45183816 | None:intergenic |
| CAGGAAGCTCGAAGGAATAG+TGG | 0.469265 | 5.1:-45183490 | MS.gene053786:CDS |
| GTGTAAGTGTCAGCCTTGAT+TGG | 0.480040 | 5.1:-45183695 | MS.gene053786:CDS |
| TGGTTTAGTATCATGTCCCT+TGG | 0.503070 | 5.1:-45182738 | MS.gene053786:CDS |
| TACTATGTTGTAACTGATGA+AGG | 0.503160 | 5.1:-45186217 | MS.gene053786:CDS |
| TGACACTTACACTACCTTCT+GGG | 0.510439 | 5.1:+45183706 | None:intergenic |
| AAACAAATGCTCGAGTCGCT+TGG | 0.510777 | 5.1:-45182758 | MS.gene053786:CDS |
| TTTAGTTCCTGAACTTGGAA+TGG | 0.516063 | 5.1:+45186285 | None:intergenic |
| TGCCACATAATTTCCACTCT+CGG | 0.522318 | 5.1:+45183752 | None:intergenic |
| CAAGCTATGAAGTTAAAAGA+TGG | 0.535888 | 5.1:-45186382 | None:intergenic |
| AAACTAAAACGCAGAGACCA+AGG | 0.543213 | 5.1:+45182721 | None:intergenic |
| GAAAACTGGAATTTCAGCAA+AGG | 0.546642 | 5.1:-45183673 | MS.gene053786:CDS |
| GCATTTACAACTACCGAGAG+TGG | 0.562957 | 5.1:-45183765 | MS.gene053786:CDS |
| TCAAATAAATTAGATAATCG+TGG | 0.574741 | 5.1:+45183460 | None:intergenic |
| ATAAATTAGATAATCGTGGA+TGG | 0.583572 | 5.1:+45183464 | None:intergenic |
| TACCGAGAGTGGAAATTATG+TGG | 0.589093 | 5.1:-45183754 | MS.gene053786:CDS |
| AACTAAAACGCAGAGACCAA+GGG | 0.592971 | 5.1:+45182722 | None:intergenic |
| GATTAGGGAACATACCTTCG+CGG | 0.602938 | 5.1:+45186180 | None:intergenic |
| TCTTCACACTATTTCCGCGA+AGG | 0.616024 | 5.1:-45186194 | MS.gene053786:intron |
| CTTGAAATCAGGAAGCTCGA+AGG | 0.630601 | 5.1:-45183498 | MS.gene053786:CDS |
| CATAATGAAAATGTTACACA+AGG | 0.640271 | 5.1:-45183795 | MS.gene053786:CDS |
| TGCAAAGAAAGAAAAGATTG+AGG | 0.640940 | 5.1:-45183637 | MS.gene053786:intron |
| GCTACAGGGAAGCAACGATG+AGG | 0.655281 | 5.1:-45182794 | MS.gene053786:intron |
| CTACAGGGAAGCAACGATGA+GGG | 0.656889 | 5.1:-45182793 | MS.gene053786:intron |
| ATGGAAGGAAAACACCCAGA+AGG | 0.668528 | 5.1:-45183720 | MS.gene053786:CDS |
| TGAAGATATTCAAACACATG+TGG | 0.711422 | 5.1:-45186254 | MS.gene053786:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAACATAAAACATTTAAAA+TGG | + | chr5.1:45184320-45184339 | None:intergenic | 10.0% |
| !!! | ATAATTTTTTTTTACAATGA+TGG | + | chr5.1:45185023-45185042 | None:intergenic | 10.0% |
| !!! | CAATTAAATTGATAATTTAA+TGG | - | chr5.1:45185149-45185168 | MS.gene053786:intron | 10.0% |
| !!! | TATTTAATTTATATTTTTGC+AGG | - | chr5.1:45185194-45185213 | MS.gene053786:intron | 10.0% |
| !!! | TTTAAAATCACATATATAAT+TGG | - | chr5.1:45185075-45185094 | MS.gene053786:intron | 10.0% |
| !! | AATTAAAACTATCAAATTCA+AGG | + | chr5.1:45184072-45184091 | None:intergenic | 15.0% |
| !! | ATATAAGCAAAACATTAATA+TGG | + | chr5.1:45185492-45185511 | None:intergenic | 15.0% |
| !! | ATATAATTTCAACAAACAAA+AGG | + | chr5.1:45184227-45184246 | None:intergenic | 15.0% |
| !! | ATTGTTATGTTAATGAAATT+TGG | - | chr5.1:45184100-45184119 | MS.gene053786:intron | 15.0% |
| !! | TTGTTATGTTAATGAAATTT+GGG | - | chr5.1:45184101-45184120 | MS.gene053786:intron | 15.0% |
| !!! | GTAATTTTCTTTCAAATTTT+TGG | - | chr5.1:45183111-45183130 | MS.gene053786:intron | 15.0% |
| !!! | TAAATGTTTTATGTTTATCT+TGG | - | chr5.1:45184323-45184342 | MS.gene053786:intron | 15.0% |
| !!! | TTATTAGTTTTCAATTTTCA+TGG | - | chr5.1:45184383-45184402 | MS.gene053786:intron | 15.0% |
| !!! | TTTGTTTGTTGAAATTATAT+GGG | - | chr5.1:45184227-45184246 | MS.gene053786:intron | 15.0% |
| !!! | TTTTGTTTGTTGAAATTATA+TGG | - | chr5.1:45184226-45184245 | MS.gene053786:intron | 15.0% |
| !! | AAATCACATATATAATTGGT+TGG | - | chr5.1:45185079-45185098 | MS.gene053786:intron | 20.0% |
| !! | AACATTATACACTAAGAAAA+GGG | + | chr5.1:45183190-45183209 | None:intergenic | 20.0% |
| !! | CGATTATCTAATTTATTTGA+AGG | - | chr5.1:45185584-45185603 | MS.gene053786:intron | 20.0% |
| !! | GAACTTAAAAAATGTATTAG+AGG | + | chr5.1:45185731-45185750 | None:intergenic | 20.0% |
| !! | GAGAATTTAATTAATACATG+CGG | + | chr5.1:45185948-45185967 | None:intergenic | 20.0% |
| !! | TACTATTCAATTCAATATGT+AGG | - | chr5.1:45184356-45184375 | MS.gene053786:intron | 20.0% |
| !! | TCAAATAAATTAGATAATCG+TGG | + | chr5.1:45185584-45185603 | None:intergenic | 20.0% |
| !!! | TAAAATGGTTGTTCTAAATT+CGG | + | chr5.1:45184305-45184324 | None:intergenic | 20.0% |
| !!! | TAAATAGACATTTTGATAGA+GGG | - | chr5.1:45184414-45184433 | MS.gene053786:intron | 20.0% |
| !!! | TAAATATTTACTCTTTTGTC+CGG | + | chr5.1:45183060-45183079 | None:intergenic | 20.0% |
| !!! | TTTTAAGTTCTTCCAAATTA+GGG | - | chr5.1:45185741-45185760 | MS.gene053786:intron | 20.0% |
| !!! | TTTTTAAGTTCTTCCAAATT+AGG | - | chr5.1:45185740-45185759 | MS.gene053786:intron | 20.0% |
| ! | AAAAATGGGTGAACTAAAAT+TGG | - | chr5.1:45183454-45183473 | MS.gene053786:CDS | 25.0% |
| ! | AATACAAAATTCCCCTAATT+TGG | + | chr5.1:45185756-45185775 | None:intergenic | 25.0% |
| ! | AATCAAAAGTTTACCAACAA+TGG | - | chr5.1:45183248-45183267 | MS.gene053786:intron | 25.0% |
| ! | ATAAATTAGATAATCGTGGA+TGG | + | chr5.1:45185580-45185599 | None:intergenic | 25.0% |
| ! | ATAACATGGTAACAATAACA+TGG | - | chr5.1:45183906-45183925 | MS.gene053786:intron | 25.0% |
| ! | ATAGGTATTCTTAGAAATTG+TGG | + | chr5.1:45183888-45183907 | None:intergenic | 25.0% |
| ! | ATCTAAACTAAGCAATGATT+AGG | + | chr5.1:45182880-45182899 | None:intergenic | 25.0% |
| ! | CAAATCTTCATTGATGTTAT+AGG | + | chr5.1:45183729-45183748 | None:intergenic | 25.0% |
| ! | CAACATTATACACTAAGAAA+AGG | + | chr5.1:45183191-45183210 | None:intergenic | 25.0% |
| ! | CATAATGAAAATGTTACACA+AGG | - | chr5.1:45185246-45185265 | MS.gene053786:intron | 25.0% |
| ! | GGTGTATCATTAATTTCATA+CGG | - | chr5.1:45185652-45185671 | MS.gene053786:intron | 25.0% |
| ! | GTATGTTTGGAAATTTAAGA+GGG | + | chr5.1:45185817-45185836 | None:intergenic | 25.0% |
| ! | GTGTATAATGTTGTTAAAAC+AGG | - | chr5.1:45183198-45183217 | MS.gene053786:intron | 25.0% |
| ! | TACGTGCATTCTTTAATTAA+AGG | - | chr5.1:45184445-45184464 | MS.gene053786:intron | 25.0% |
| ! | TATGTTTGGAAATTTAAGAG+GGG | + | chr5.1:45185816-45185835 | None:intergenic | 25.0% |
| ! | TATTCTTAGAAATTGTGGTT+GGG | + | chr5.1:45183883-45183902 | None:intergenic | 25.0% |
| ! | TCACAAGACAATCTAAAAAT+GGG | - | chr5.1:45183440-45183459 | MS.gene053786:intron | 25.0% |
| ! | TCCTAAACTTAAAAAAATCG+CGG | + | chr5.1:45183545-45183564 | None:intergenic | 25.0% |
| ! | TCTAAACTAAGCAATGATTA+GGG | + | chr5.1:45182879-45182898 | None:intergenic | 25.0% |
| ! | TGAAGATCTATACAAAGTTA+GGG | - | chr5.1:45183163-45183182 | MS.gene053786:intron | 25.0% |
| ! | TGGAATTCATAAGCTTATTA+GGG | - | chr5.1:45184585-45184604 | MS.gene053786:intron | 25.0% |
| ! | TGGTTTATTAAGGAATCATT+TGG | + | chr5.1:45184708-45184727 | None:intergenic | 25.0% |
| ! | TGTTATTGTTACCATGTTAT+AGG | + | chr5.1:45183906-45183925 | None:intergenic | 25.0% |
| ! | TTGAAGATCTATACAAAGTT+AGG | - | chr5.1:45183162-45183181 | MS.gene053786:intron | 25.0% |
| ! | TTGGAATTCATAAGCTTATT+AGG | - | chr5.1:45184584-45184603 | MS.gene053786:intron | 25.0% |
| ! | TTTGTTGAAATTATATGGGT+TGG | - | chr5.1:45184231-45184250 | MS.gene053786:intron | 25.0% |
| !! | AAATATTTACTCTTTTGTCC+GGG | + | chr5.1:45183059-45183078 | None:intergenic | 25.0% |
| !! | AATGTATTAGAGGAGAATTT+TGG | + | chr5.1:45185721-45185740 | None:intergenic | 25.0% |
| !! | CTTGTGTAACATTTTCATTA+TGG | + | chr5.1:45185248-45185267 | None:intergenic | 25.0% |
| !! | GATAGAGAAAATAAGCATTT+TGG | + | chr5.1:45184533-45184552 | None:intergenic | 25.0% |
| !! | GGATATTATTAGTTTAGTGT+TGG | - | chr5.1:45183219-45183238 | MS.gene053786:intron | 25.0% |
| !! | TGATAGTTTTCAATTTTCAC+TGG | - | chr5.1:45184149-45184168 | MS.gene053786:intron | 25.0% |
| !! | TTCAAGTTAACTATTGTGAT+CGG | - | chr5.1:45182948-45182967 | MS.gene053786:intron | 25.0% |
| !! | TTCTAAAAACAGAAGCTATA+TGG | - | chr5.1:45182729-45182748 | MS.gene053786:CDS | 25.0% |
| !! | TTCTAAGAATACCTATAACA+TGG | - | chr5.1:45183892-45183911 | MS.gene053786:intron | 25.0% |
| !! | TTCTTTTTGTGATGTATGAA+TGG | - | chr5.1:45185458-45185477 | MS.gene053786:intron | 25.0% |
| !! | TTTAAAGTGTGATTAGATCA+AGG | - | chr5.1:45185631-45185650 | MS.gene053786:intron | 25.0% |
| !! | TTTAAGTTCTTCCAAATTAG+GGG | - | chr5.1:45185742-45185761 | MS.gene053786:intron | 25.0% |
| !!! | AATCATTTTTTGTTTCCTAG+AGG | + | chr5.1:45186153-45186172 | None:intergenic | 25.0% |
| !!! | CTAAATAGACATTTTGATAG+AGG | - | chr5.1:45184413-45184432 | MS.gene053786:intron | 25.0% |
| !!! | CTATTTGGATTGGTTTATTA+AGG | + | chr5.1:45184718-45184737 | None:intergenic | 25.0% |
| !!! | CTTATATGATTTGTTTGCTT+TGG | - | chr5.1:45185505-45185524 | MS.gene053786:intron | 25.0% |
| !!! | GAAGATTTGTTATAGCTAAA+CGG | - | chr5.1:45183740-45183759 | MS.gene053786:CDS | 25.0% |
| !!! | TTTTGGTTCAGAAAAATCTA+TGG | + | chr5.1:45184516-45184535 | None:intergenic | 25.0% |
| !!! | TTTTTTAAGTTTAGGAGGTT+CGG | - | chr5.1:45183549-45183568 | MS.gene053786:intron | 25.0% |
| AAAATCACACACAAAGATCA+AGG | + | chr5.1:45184968-45184987 | None:intergenic | 30.0% | |
| AAAGTTTACCAACAATGGAT+TGG | - | chr5.1:45183253-45183272 | MS.gene053786:intron | 30.0% | |
| AAATCACACACAAAGATCAA+GGG | + | chr5.1:45184967-45184986 | None:intergenic | 30.0% | |
| AACTTAAACAACTTGATGTC+TGG | + | chr5.1:45184992-45185011 | None:intergenic | 30.0% | |
| AATTTCAACAAACAAAAGGC+TGG | + | chr5.1:45184223-45184242 | None:intergenic | 30.0% | |
| ACTAGTGTGATCTATATAGA+AGG | - | chr5.1:45183088-45183107 | MS.gene053786:intron | 30.0% | |
| ACTTGACCATTACTGAAATT+CGG | + | chr5.1:45186012-45186031 | None:intergenic | 30.0% | |
| ACTTTGTATAGATCTTCAAC+AGG | + | chr5.1:45183161-45183180 | None:intergenic | 30.0% | |
| CAAACTGAAAGCAAACTTAA+GGG | + | chr5.1:45185839-45185858 | None:intergenic | 30.0% | |
| CTAGTGTGATCTATATAGAA+GGG | - | chr5.1:45183089-45183108 | MS.gene053786:intron | 30.0% | |
| CTGACAATGTGTTTATAAGT+GGG | - | chr5.1:45183813-45183832 | MS.gene053786:CDS | 30.0% | |
| CTTTGTATAGATCTTCAACA+GGG | + | chr5.1:45183160-45183179 | None:intergenic | 30.0% | |
| GGAATTCATAAGCTTATTAG+GGG | - | chr5.1:45184586-45184605 | MS.gene053786:intron | 30.0% | |
| GGTATGTTTGGAAATTTAAG+AGG | + | chr5.1:45185818-45185837 | None:intergenic | 30.0% | |
| GTATGGAGAAAAATTTGACT+AGG | - | chr5.1:45183624-45183643 | MS.gene053786:intron | 30.0% | |
| GTATTCTTAGAAATTGTGGT+TGG | + | chr5.1:45183884-45183903 | None:intergenic | 30.0% | |
| GTCACAAGACAATCTAAAAA+TGG | - | chr5.1:45183439-45183458 | MS.gene053786:intron | 30.0% | |
| TACTATGTTGTAACTGATGA+AGG | - | chr5.1:45182824-45182843 | MS.gene053786:intron | 30.0% | |
| TACTTCACTAAATCGATAGT+TGG | - | chr5.1:45186049-45186068 | MS.gene053786:intron | 30.0% | |
| TCAAGTTAACTATTGTGATC+GGG | - | chr5.1:45182949-45182968 | MS.gene053786:intron | 30.0% | |
| TGAAGATATTCAAACACATG+TGG | - | chr5.1:45182787-45182806 | MS.gene053786:CDS | 30.0% | |
| TGACAATGTGTTTATAAGTG+GGG | - | chr5.1:45183814-45183833 | MS.gene053786:CDS | 30.0% | |
| TGCAAAGAAAGAAAAGATTG+AGG | - | chr5.1:45185404-45185423 | MS.gene053786:intron | 30.0% | |
| TTAAAGAATGCACGTAAACT+AGG | + | chr5.1:45184441-45184460 | None:intergenic | 30.0% | |
| TTCAGAAAAATCTATGGATC+CGG | + | chr5.1:45184510-45184529 | None:intergenic | 30.0% | |
| ! | AAATTCCAGTTTTCCAATCA+AGG | + | chr5.1:45185362-45185381 | None:intergenic | 30.0% |
| ! | ATTTGTTTGCTTTGGTTCAA+GGG | - | chr5.1:45185513-45185532 | MS.gene053786:intron | 30.0% |
| ! | CTTCTTATAACCTTTGAGTT+TGG | - | chr5.1:45184807-45184826 | MS.gene053786:intron | 30.0% |
| ! | GTTGTTCTAAATTCGGAAAT+AGG | + | chr5.1:45184298-45184317 | None:intergenic | 30.0% |
| !! | AAAATTGGTTTGAACCTCTT+TGG | - | chr5.1:45183469-45183488 | MS.gene053786:CDS | 30.0% |
| !! | AAATTGGTTTGAACCTCTTT+GGG | - | chr5.1:45183470-45183489 | MS.gene053786:CDS | 30.0% |
| !! | AATGCTTATTTTCTCTATCC+AGG | - | chr5.1:45184534-45184553 | MS.gene053786:intron | 30.0% |
| !! | ATGCTTATTTTCTCTATCCA+GGG | - | chr5.1:45184535-45184554 | MS.gene053786:intron | 30.0% |
| !!! | GCGATTTTTTTAAGTTTAGG+AGG | - | chr5.1:45183544-45183563 | MS.gene053786:intron | 30.0% |
| !!! | TCCGCGATTTTTTTAAGTTT+AGG | - | chr5.1:45183541-45183560 | MS.gene053786:intron | 30.0% |
| AACCACTAACCACTTACTTA+AGG | + | chr5.1:45183303-45183322 | None:intergenic | 35.0% | |
| AATATTTAAGCTAGCCCAGT+TGG | - | chr5.1:45183005-45183024 | MS.gene053786:intron | 35.0% | |
| AATCTGATGACCAAACTCAA+AGG | + | chr5.1:45184820-45184839 | None:intergenic | 35.0% | |
| ACCACTAACCACTTACTTAA+GGG | + | chr5.1:45183302-45183321 | None:intergenic | 35.0% | |
| ACTTGAATCCCTTAAGTAAG+TGG | - | chr5.1:45183291-45183310 | MS.gene053786:intron | 35.0% | |
| AGCTTACTGAAAACAGCTTA+TGG | - | chr5.1:45184609-45184628 | MS.gene053786:intron | 35.0% | |
| CAAGTTAACTATTGTGATCG+GGG | - | chr5.1:45182950-45182969 | MS.gene053786:intron | 35.0% | |
| CCAAACTGAAAGCAAACTTA+AGG | + | chr5.1:45185840-45185859 | None:intergenic | 35.0% | |
| CCACTTATAAACACATTGTC+AGG | + | chr5.1:45183815-45183834 | None:intergenic | 35.0% | |
| CCTGACAATGTGTTTATAAG+TGG | - | chr5.1:45183812-45183831 | MS.gene053786:CDS | 35.0% | |
| GAAAACTGGAATTTCAGCAA+AGG | - | chr5.1:45185368-45185387 | MS.gene053786:intron | 35.0% | |
| GAAGATTTGTCATCGCTAAA+CGG | - | chr5.1:45183687-45183706 | MS.gene053786:CDS | 35.0% | |
| GACAATGTGTTTATAAGTGG+GGG | - | chr5.1:45183815-45183834 | MS.gene053786:CDS | 35.0% | |
| GCTTACTGAAAACAGCTTAT+GGG | - | chr5.1:45184610-45184629 | MS.gene053786:intron | 35.0% | |
| TAGCGATGACAAATCTTCAT+CGG | + | chr5.1:45183685-45183704 | None:intergenic | 35.0% | |
| TATGACTTATGAGCCTGTTT+GGG | + | chr5.1:45184663-45184682 | None:intergenic | 35.0% | |
| TGGAATTTCAGCAAAGGATT+GGG | - | chr5.1:45185374-45185393 | MS.gene053786:intron | 35.0% | |
| TGGAGAAAAATTTGACTAGG+AGG | - | chr5.1:45183627-45183646 | MS.gene053786:intron | 35.0% | |
| TTATGACTTATGAGCCTGTT+TGG | + | chr5.1:45184664-45184683 | None:intergenic | 35.0% | |
| TTCCATCCGAATTTCAGTAA+TGG | - | chr5.1:45186003-45186022 | MS.gene053786:intron | 35.0% | |
| TTGTTATAGCTAAACGGTTG+TGG | - | chr5.1:45183746-45183765 | MS.gene053786:CDS | 35.0% | |
| ! | ACACATTTAGTTCCTGAACT+TGG | + | chr5.1:45182764-45182783 | None:intergenic | 35.0% |
| ! | AGCAAACTTAAGGGTATGTT+TGG | + | chr5.1:45185830-45185849 | None:intergenic | 35.0% |
| ! | ATTTCTCTTTTGCGAGTTTG+AGG | - | chr5.1:45184474-45184493 | MS.gene053786:intron | 35.0% |
| ! | CCTTAAGTTTGCTTTCAGTT+TGG | - | chr5.1:45185837-45185856 | MS.gene053786:intron | 35.0% |
| ! | GAAATTATGTGGCATGCTTT+TGG | - | chr5.1:45185298-45185317 | MS.gene053786:intron | 35.0% |
| ! | GATTTGTTTGCTTTGGTTCA+AGG | - | chr5.1:45185512-45185531 | MS.gene053786:intron | 35.0% |
| ! | TAGTTTCTGGATTGCAACTT+TGG | - | chr5.1:45186337-45186356 | MS.gene053786:CDS | 35.0% |
| ! | TGTACTATTTTCTCCCAAAC+AGG | - | chr5.1:45184647-45184666 | MS.gene053786:intron | 35.0% |
| ! | TTTAGTTCCTGAACTTGGAA+TGG | + | chr5.1:45182759-45182778 | None:intergenic | 35.0% |
| ! | TTTCCTAGAGGAAGTATAAC+AGG | + | chr5.1:45186141-45186160 | None:intergenic | 35.0% |
| ! | TTTCTCTTTTGCGAGTTTGA+GGG | - | chr5.1:45184475-45184494 | MS.gene053786:intron | 35.0% |
| ! | TTTTCCTTGACATTGCTACA+GGG | - | chr5.1:45186233-45186252 | MS.gene053786:CDS | 35.0% |
| ! | TTTTTCCTTGACATTGCTAC+AGG | - | chr5.1:45186232-45186251 | MS.gene053786:CDS | 35.0% |
| !! | AATGGATTGGTCCAAGTAAT+TGG | - | chr5.1:45183266-45183285 | MS.gene053786:intron | 35.0% |
| !! | ATGGATTGGTCCAAGTAATT+GGG | - | chr5.1:45183267-45183286 | MS.gene053786:intron | 35.0% |
| !! | TGCTTATTTTCTCTATCCAG+GGG | - | chr5.1:45184536-45184555 | MS.gene053786:intron | 35.0% |
| AAACTAAAACGCAGAGACCA+AGG | + | chr5.1:45186323-45186342 | None:intergenic | 40.0% | |
| AACATGTGGGACACACAATA+TGG | + | chr5.1:45183660-45183679 | None:intergenic | 40.0% | |
| AACTAAAACGCAGAGACCAA+GGG | + | chr5.1:45186322-45186341 | None:intergenic | 40.0% | |
| AAGTGGTTAGTGGTTCAATC+TGG | - | chr5.1:45183308-45183327 | MS.gene053786:intron | 40.0% | |
| ACCATCTCTTAGAGGCTATT+TGG | + | chr5.1:45184733-45184752 | None:intergenic | 40.0% | |
| AGACCTGTTATACTTCCTCT+AGG | - | chr5.1:45186135-45186154 | MS.gene053786:intron | 40.0% | |
| AGCGATGACAAATCTTCATC+GGG | + | chr5.1:45183684-45183703 | None:intergenic | 40.0% | |
| AGTTTGAGGGATTAGATTGC+CGG | - | chr5.1:45184488-45184507 | MS.gene053786:intron | 40.0% | |
| ATCCAACTCCTTAACCAACT+GGG | + | chr5.1:45183022-45183041 | None:intergenic | 40.0% | |
| ATTTAAGAGGGGAAGAATCG+AGG | + | chr5.1:45185805-45185824 | None:intergenic | 40.0% | |
| CATGTGAACAGCAACAAGTA+AGG | + | chr5.1:45183137-45183156 | None:intergenic | 40.0% | |
| CTAACACAACCTCACAAAAC+CGG | + | chr5.1:45183859-45183878 | None:intergenic | 40.0% | |
| CTCTTAGAGGCTATTTGGAT+TGG | + | chr5.1:45184728-45184747 | None:intergenic | 40.0% | |
| CTGGAATTTCAGCAAAGGAT+TGG | - | chr5.1:45185373-45185392 | MS.gene053786:intron | 40.0% | |
| GACCATTACTGAAATTCGGA+TGG | + | chr5.1:45186008-45186027 | None:intergenic | 40.0% | |
| GATTCAAGTCCCCAATTACT+TGG | + | chr5.1:45183280-45183299 | None:intergenic | 40.0% | |
| GTATTTGACCATGTGATGCT+CGG | - | chr5.1:45185866-45185885 | MS.gene053786:intron | 40.0% | |
| GTTAAGGAGTTGGATGTAGT+GGG | - | chr5.1:45183027-45183046 | MS.gene053786:intron | 40.0% | |
| GTTGAACCACACAATAGTGA+CGG | + | chr5.1:45183582-45183601 | None:intergenic | 40.0% | |
| TAACTATTGTGATCGGGGTT+CGG | - | chr5.1:45182955-45182974 | MS.gene053786:intron | 40.0% | |
| TACCGAGAGTGGAAATTATG+TGG | - | chr5.1:45185287-45185306 | MS.gene053786:intron | 40.0% | |
| TACTTGGACCAATCCATTGT+TGG | + | chr5.1:45183264-45183283 | None:intergenic | 40.0% | |
| TCCCTTAAGTAAGTGGTTAG+TGG | - | chr5.1:45183298-45183317 | MS.gene053786:intron | 40.0% | |
| TCGTGTAATGAAGACACTCA+AGG | + | chr5.1:45186112-45186131 | None:intergenic | 40.0% | |
| TGAAGAGTGGATAAGCTTCT+TGG | - | chr5.1:45184565-45184584 | MS.gene053786:intron | 40.0% | |
| TGACACTTACACTACCTTCT+GGG | + | chr5.1:45185338-45185357 | None:intergenic | 40.0% | |
| TGCCACATAATTTCCACTCT+CGG | + | chr5.1:45185292-45185311 | None:intergenic | 40.0% | |
| TGGTTTAGTATCATGTCCCT+TGG | - | chr5.1:45186303-45186322 | MS.gene053786:CDS | 40.0% | |
| TTGAACCACACAATAGTGAC+GGG | + | chr5.1:45183581-45183600 | None:intergenic | 40.0% | |
| TTTAAGAGGGGAAGAATCGA+GGG | + | chr5.1:45185804-45185823 | None:intergenic | 40.0% | |
| TTTCTCCATACACAAGAGTC+CGG | + | chr5.1:45183615-45183634 | None:intergenic | 40.0% | |
| ! | AATAGCCTCTAAGAGATGGT+AGG | - | chr5.1:45184733-45184752 | MS.gene053786:intron | 40.0% |
| ! | TCCAAATAGCCTCTAAGAGA+TGG | - | chr5.1:45184729-45184748 | MS.gene053786:intron | 40.0% |
| ! | TGGTGAACGTTGTTTCCAAA+AGG | + | chr5.1:45185228-45185247 | None:intergenic | 40.0% |
| ! | TTATGTGGCATGCTTTTGGA+TGG | - | chr5.1:45185302-45185321 | MS.gene053786:intron | 40.0% |
| ! | TTGCAGGTAACATCTCCTTT+TGG | - | chr5.1:45185210-45185229 | MS.gene053786:intron | 40.0% |
| !! | AGGGTGTTGAACTTGAAATC+AGG | - | chr5.1:45185532-45185551 | MS.gene053786:intron | 40.0% |
| !! | ATTTTCTTGAGTGTTGTCGC+GGG | - | chr5.1:45184916-45184935 | MS.gene053786:intron | 40.0% |
| !! | CATTTTCTTGAGTGTTGTCG+CGG | - | chr5.1:45184915-45184934 | MS.gene053786:intron | 40.0% |
| !! | TGGATTGGTCCAAGTAATTG+GGG | - | chr5.1:45183268-45183287 | MS.gene053786:intron | 40.0% |
| AAACAAATGCTCGAGTCGCT+TGG | - | chr5.1:45186283-45186302 | MS.gene053786:CDS | 45.0% | |
| AATCTTCATCGGGGAACATG+TGG | + | chr5.1:45183674-45183693 | None:intergenic | 45.0% | |
| ACCTGTTAAGAGTCCCACAT+CGG | - | chr5.1:45183778-45183797 | MS.gene053786:CDS | 45.0% | |
| ATCTTCATCGGGGAACATGT+GGG | + | chr5.1:45183673-45183692 | None:intergenic | 45.0% | |
| ATGGAAGGAAAACACCCAGA+AGG | - | chr5.1:45185321-45185340 | MS.gene053786:intron | 45.0% | |
| CATCCAACTCCTTAACCAAC+TGG | + | chr5.1:45183023-45183042 | None:intergenic | 45.0% | |
| CTGACACTTACACTACCTTC+TGG | + | chr5.1:45185339-45185358 | None:intergenic | 45.0% | |
| CTTGAAATCAGGAAGCTCGA+AGG | - | chr5.1:45185543-45185562 | MS.gene053786:intron | 45.0% | |
| GATTAGGGAACATACCTTCG+CGG | + | chr5.1:45182864-45182883 | None:intergenic | 45.0% | |
| GATTTGTCATCGCTAAACGG+CGG | - | chr5.1:45183690-45183709 | MS.gene053786:CDS | 45.0% | |
| GCATTTACAACTACCGAGAG+TGG | - | chr5.1:45185276-45185295 | MS.gene053786:intron | 45.0% | |
| GCGATGACAAATCTTCATCG+GGG | + | chr5.1:45183683-45183702 | None:intergenic | 45.0% | |
| GGTGAGAACACTCATCCAAT+AGG | + | chr5.1:45184946-45184965 | None:intergenic | 45.0% | |
| GGTTAAGGAGTTGGATGTAG+TGG | - | chr5.1:45183026-45183045 | MS.gene053786:intron | 45.0% | |
| GTCAGCCTTGATTGGAAAAC+TGG | - | chr5.1:45185354-45185373 | MS.gene053786:intron | 45.0% | |
| GTGTAAGTGTCAGCCTTGAT+TGG | - | chr5.1:45185346-45185365 | MS.gene053786:intron | 45.0% | |
| TAAGCTAGCCCAGTTGGTTA+AGG | - | chr5.1:45183011-45183030 | MS.gene053786:intron | 45.0% | |
| TCAATCCGGACTCTTGTGTA+TGG | - | chr5.1:45183607-45183626 | MS.gene053786:intron | 45.0% | |
| TCTTCACACTATTTCCGCGA+AGG | - | chr5.1:45182847-45182866 | MS.gene053786:intron | 45.0% | |
| TGAACCACACAATAGTGACG+GGG | + | chr5.1:45183580-45183599 | None:intergenic | 45.0% | |
| TGGTTAGTGGTTCAATCTGG+TGG | - | chr5.1:45183311-45183330 | MS.gene053786:intron | 45.0% | |
| TGGTTCAACCACTGTCAATC+CGG | - | chr5.1:45183593-45183612 | MS.gene053786:intron | 45.0% | |
| TGGTTGACCATTCCAAGTTC+AGG | - | chr5.1:45182749-45182768 | MS.gene053786:CDS | 45.0% | |
| !! | CGGTTTTGTGAGGTTGTGTT+AGG | - | chr5.1:45183857-45183876 | MS.gene053786:intron | 45.0% |
| !!! | GGTCTCTGCGTTTTAGTTTC+TGG | - | chr5.1:45186324-45186343 | MS.gene053786:CDS | 45.0% |
| ACAAGAGTCCGGATTGACAG+TGG | + | chr5.1:45183604-45183623 | None:intergenic | 50.0% | |
| AGCCCAGTTGGTTAAGGAGT+TGG | - | chr5.1:45183017-45183036 | MS.gene053786:intron | 50.0% | |
| AGGCCAACTCATATCCGATG+TGG | + | chr5.1:45183795-45183814 | None:intergenic | 50.0% | |
| ATCCCGAAGCTGTGCATCAA+CGG | + | chr5.1:45184849-45184868 | None:intergenic | 50.0% | |
| ATCTCGAACCGAGCATCACA+TGG | + | chr5.1:45185877-45185896 | None:intergenic | 50.0% | |
| CAGGAAGCTCGAAGGAATAG+TGG | - | chr5.1:45185551-45185570 | MS.gene053786:intron | 50.0% | |
| CGACACCTACCATCTCTTAG+AGG | + | chr5.1:45184741-45184760 | None:intergenic | 50.0% | |
| CTACAGGGAAGCAACGATGA+GGG | - | chr5.1:45186248-45186267 | MS.gene053786:CDS | 50.0% | |
| GCTTCCCTGTAGCAATGTCA+AGG | + | chr5.1:45186240-45186259 | None:intergenic | 50.0% | |
| GGCCAACTCATATCCGATGT+GGG | + | chr5.1:45183794-45183813 | None:intergenic | 50.0% | |
| GTCCCACATCGGATATGAGT+TGG | - | chr5.1:45183789-45183808 | MS.gene053786:CDS | 50.0% | |
| TCCGATGTGGGACTCTTAAC+AGG | + | chr5.1:45183782-45183801 | None:intergenic | 50.0% | |
| TGAACCCCGTCACTATTGTG+TGG | - | chr5.1:45183573-45183592 | MS.gene053786:intron | 50.0% | |
| TGTCCGTTGATGCACAGCTT+CGG | - | chr5.1:45184843-45184862 | MS.gene053786:intron | 50.0% | |
| TTTGAACCTCTTTGGGCCAG+TGG | - | chr5.1:45183477-45183496 | MS.gene053786:CDS | 50.0% | |
| ! | AATCTGGTGGCGTTGTTGCT+AGG | - | chr5.1:45183324-45183343 | MS.gene053786:intron | 50.0% |
| ! | GGGAAGAATCGAGGGTTTTG+AGG | + | chr5.1:45185796-45185815 | None:intergenic | 50.0% |
| ! | GTGGCATGCTTTTGGATGGA+AGG | - | chr5.1:45185306-45185325 | MS.gene053786:intron | 50.0% |
| ! | TGTGATGCTCGGTTCGAGAT+TGG | - | chr5.1:45185877-45185896 | MS.gene053786:intron | 50.0% |
| !! | GGATGTAGTGGGTTCAAACC+CGG | - | chr5.1:45183038-45183057 | MS.gene053786:intron | 50.0% |
| ACCCCCAAGTTTAGCACCAC+TGG | + | chr5.1:45183496-45183515 | None:intergenic | 55.0% | |
| CCACTCTTCATAAGCTCCCC+TGG | + | chr5.1:45184555-45184574 | None:intergenic | 55.0% | |
| CCAGGGGAGCTTATGAAGAG+TGG | - | chr5.1:45184552-45184571 | MS.gene053786:intron | 55.0% | |
| GCTACAGGGAAGCAACGATG+AGG | - | chr5.1:45186247-45186266 | MS.gene053786:CDS | 55.0% | |
| GTCCGTTGATGCACAGCTTC+GGG | - | chr5.1:45184844-45184863 | MS.gene053786:intron | 55.0% | |
| GTTGATGCACAGCTTCGGGA+TGG | - | chr5.1:45184848-45184867 | MS.gene053786:intron | 55.0% | |
| TTAGCACCACTGGCCCAAAG+AGG | + | chr5.1:45183486-45183505 | None:intergenic | 55.0% | |
| TTGTCATCGCTAAACGGCGG+TGG | - | chr5.1:45183693-45183712 | MS.gene053786:CDS | 55.0% | |
| ! | GCCAGTGGTGCTAAACTTGG+GGG | - | chr5.1:45183492-45183511 | MS.gene053786:CDS | 55.0% |
| ! | GGCCAGTGGTGCTAAACTTG+GGG | - | chr5.1:45183491-45183510 | MS.gene053786:CDS | 55.0% |
| ! | GGGCCAGTGGTGCTAAACTT+GGG | - | chr5.1:45183490-45183509 | MS.gene053786:CDS | 55.0% |
| ! | TGGGCCAGTGGTGCTAAACT+TGG | - | chr5.1:45183489-45183508 | MS.gene053786:CDS | 55.0% |
| !! | CCTCACAAAACCGGCTTGTG+CGG | + | chr5.1:45183850-45183869 | None:intergenic | 55.0% |
| GCAATCCTCACCGCACAAGC+CGG | - | chr5.1:45183837-45183856 | MS.gene053786:intron | 60.0% | |
| GGCGTTGTTGCTAGGACGCT+GGG | - | chr5.1:45183332-45183351 | MS.gene053786:intron | 60.0% | |
| GTTGTCGCGGGTGAGCCTAT+TGG | - | chr5.1:45184928-45184947 | MS.gene053786:intron | 60.0% | |
| TGGCGTTGTTGCTAGGACGC+TGG | - | chr5.1:45183331-45183350 | MS.gene053786:intron | 60.0% | |
| !! | CAAAACCGGCTTGTGCGGTG+AGG | + | chr5.1:45183845-45183864 | None:intergenic | 60.0% |
| !! | CCGCACAAGCCGGTTTTGTG+AGG | - | chr5.1:45183847-45183866 | MS.gene053786:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 45182665 | 45186398 | 45182665 | ID=MS.gene053786 |
| chr5.1 | mRNA | 45182665 | 45186398 | 45182665 | ID=MS.gene053786.t1;Parent=MS.gene053786 |
| chr5.1 | exon | 45186195 | 45186398 | 45186195 | ID=MS.gene053786.t1.exon1;Parent=MS.gene053786.t1 |
| chr5.1 | CDS | 45186195 | 45186398 | 45186195 | ID=cds.MS.gene053786.t1;Parent=MS.gene053786.t1 |
| chr5.1 | exon | 45183638 | 45183847 | 45183638 | ID=MS.gene053786.t1.exon2;Parent=MS.gene053786.t1 |
| chr5.1 | CDS | 45183638 | 45183847 | 45183638 | ID=cds.MS.gene053786.t1;Parent=MS.gene053786.t1 |
| chr5.1 | exon | 45183453 | 45183529 | 45183453 | ID=MS.gene053786.t1.exon3;Parent=MS.gene053786.t1 |
| chr5.1 | CDS | 45183453 | 45183529 | 45183453 | ID=cds.MS.gene053786.t1;Parent=MS.gene053786.t1 |
| chr5.1 | exon | 45182665 | 45182809 | 45182665 | ID=MS.gene053786.t1.exon4;Parent=MS.gene053786.t1 |
| chr5.1 | CDS | 45182665 | 45182809 | 45182665 | ID=cds.MS.gene053786.t1;Parent=MS.gene053786.t1 |
| Gene Sequence |
| Protein sequence |
