Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68421.t1 | KEH43325.1 | 97.9 | 570 | 12 | 0 | 1 | 570 | 1 | 570 | 0.00E+00 | 1099.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68421.t1 | Q84P21 | 45.6 | 548 | 281 | 8 | 18 | 559 | 1 | 537 | 1.0e-123 | 445.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68421.t1 | A0A072VZ46 | 97.9 | 570 | 12 | 0 | 1 | 570 | 1 | 570 | 0.0e+00 | 1099.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049993 | MS.gene68421 | 0.809465 | 1.87E-50 | -1.69E-46 |
| MS.gene050625 | MS.gene68421 | 0.809293 | 2.03E-50 | -1.69E-46 |
| MS.gene051208 | MS.gene68421 | 0.81281 | 3.52E-51 | -1.69E-46 |
| MS.gene051525 | MS.gene68421 | 0.857855 | 1.23E-62 | -1.69E-46 |
| MS.gene051588 | MS.gene68421 | 0.82524 | 5.22E-54 | -1.69E-46 |
| MS.gene052011 | MS.gene68421 | -0.842392 | 2.66E-58 | -1.69E-46 |
| MS.gene052253 | MS.gene68421 | 0.810134 | 1.34E-50 | -1.69E-46 |
| MS.gene052481 | MS.gene68421 | 0.803983 | 2.69E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene68421 | 0.831481 | 1.63E-55 | -1.69E-46 |
| MS.gene054183 | MS.gene68421 | 0.835729 | 1.42E-56 | -1.69E-46 |
| MS.gene054719 | MS.gene68421 | 0.835163 | 1.97E-56 | -1.69E-46 |
| MS.gene054917 | MS.gene68421 | 0.813425 | 2.58E-51 | -1.69E-46 |
| MS.gene054920 | MS.gene68421 | 0.837355 | 5.46E-57 | -1.69E-46 |
| MS.gene055217 | MS.gene68421 | 0.801638 | 8.19E-49 | -1.69E-46 |
| MS.gene05594 | MS.gene68421 | 0.84032 | 9.34E-58 | -1.69E-46 |
| MS.gene056514 | MS.gene68421 | 0.81484 | 1.25E-51 | -1.69E-46 |
| MS.gene057476 | MS.gene68421 | 0.824693 | 7.03E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene68421 | 0.805324 | 1.41E-49 | -1.69E-46 |
| MS.gene057888 | MS.gene68421 | 0.828938 | 6.81E-55 | -1.69E-46 |
| MS.gene058444 | MS.gene68421 | 0.80476 | 1.85E-49 | -1.69E-46 |
| MS.gene058700 | MS.gene68421 | 0.803575 | 3.27E-49 | -1.69E-46 |
| MS.gene05886 | MS.gene68421 | 0.803421 | 3.51E-49 | -1.69E-46 |
| MS.gene058885 | MS.gene68421 | 0.8265 | 2.62E-54 | -1.69E-46 |
| MS.gene059420 | MS.gene68421 | 0.847114 | 1.42E-59 | -1.69E-46 |
| MS.gene059683 | MS.gene68421 | 0.80577 | 1.14E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene68421 | 0.806103 | 9.68E-50 | -1.69E-46 |
| MS.gene060485 | MS.gene68421 | 0.812402 | 4.32E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68421.t1 | MTR_1g090737 | 97.895 | 570 | 12 | 0 | 1 | 570 | 1 | 570 | 0.0 | 1143 |
| MS.gene68421.t1 | MTR_4g057730 | 43.716 | 549 | 294 | 7 | 24 | 566 | 3 | 542 | 2.65e-152 | 448 |
| MS.gene68421.t1 | MTR_1g026310 | 45.652 | 552 | 279 | 9 | 22 | 559 | 9 | 553 | 1.59e-151 | 447 |
| MS.gene68421.t1 | MTR_2g095510 | 40.585 | 547 | 313 | 6 | 23 | 566 | 2 | 539 | 3.01e-144 | 427 |
| MS.gene68421.t1 | MTR_5g027480 | 45.037 | 544 | 275 | 12 | 25 | 558 | 18 | 547 | 1.84e-142 | 423 |
| MS.gene68421.t1 | MTR_8g039720 | 43.937 | 569 | 280 | 15 | 12 | 559 | 2 | 552 | 2.65e-139 | 416 |
| MS.gene68421.t1 | MTR_5g027500 | 44.585 | 554 | 271 | 12 | 27 | 558 | 21 | 560 | 4.45e-139 | 415 |
| MS.gene68421.t1 | MTR_4g077900 | 47.648 | 489 | 232 | 10 | 95 | 570 | 1 | 478 | 8.72e-136 | 404 |
| MS.gene68421.t1 | MTR_3g088870 | 45.219 | 502 | 255 | 7 | 67 | 559 | 61 | 551 | 2.68e-134 | 403 |
| MS.gene68421.t1 | MTR_1g063110 | 42.966 | 526 | 284 | 10 | 45 | 559 | 21 | 541 | 1.09e-131 | 395 |
| MS.gene68421.t1 | MTR_3g088880 | 43.863 | 497 | 266 | 8 | 67 | 559 | 62 | 549 | 7.91e-127 | 384 |
| MS.gene68421.t1 | MTR_1g063120 | 41.513 | 542 | 294 | 9 | 45 | 570 | 21 | 555 | 1.98e-125 | 380 |
| MS.gene68421.t1 | MTR_4g057730 | 42.469 | 478 | 260 | 7 | 24 | 495 | 3 | 471 | 8.92e-121 | 365 |
| MS.gene68421.t1 | MTR_1g073180 | 40.741 | 540 | 306 | 8 | 21 | 559 | 1 | 527 | 1.20e-115 | 354 |
| MS.gene68421.t1 | MTR_3g460770 | 38.224 | 518 | 305 | 6 | 46 | 556 | 22 | 531 | 1.97e-115 | 354 |
| MS.gene68421.t1 | MTR_2g105570 | 39.575 | 518 | 283 | 9 | 59 | 558 | 36 | 541 | 5.39e-111 | 342 |
| MS.gene68421.t1 | MTR_4g128337 | 39.179 | 536 | 301 | 9 | 45 | 567 | 26 | 549 | 1.65e-110 | 341 |
| MS.gene68421.t1 | MTR_4g057730 | 41.886 | 456 | 250 | 7 | 24 | 473 | 3 | 449 | 1.70e-109 | 335 |
| MS.gene68421.t1 | MTR_5g007640 | 39.448 | 507 | 285 | 7 | 66 | 558 | 81 | 579 | 3.97e-103 | 323 |
| MS.gene68421.t1 | MTR_2g095510 | 38.411 | 453 | 267 | 6 | 24 | 473 | 3 | 446 | 1.73e-102 | 317 |
| MS.gene68421.t1 | MTR_1g073180 | 39.655 | 522 | 299 | 9 | 22 | 542 | 24 | 530 | 3.19e-102 | 319 |
| MS.gene68421.t1 | MTR_4g005750 | 39.558 | 498 | 289 | 6 | 70 | 558 | 40 | 534 | 3.33e-101 | 317 |
| MS.gene68421.t1 | MTR_1g026430 | 39.250 | 400 | 222 | 8 | 22 | 407 | 9 | 401 | 4.02e-76 | 247 |
| MS.gene68421.t1 | MTR_1g026470 | 39.500 | 400 | 221 | 9 | 22 | 407 | 9 | 401 | 1.34e-75 | 246 |
| MS.gene68421.t1 | MTR_1569s0010 | 29.961 | 514 | 314 | 13 | 83 | 558 | 22 | 527 | 4.18e-53 | 189 |
| MS.gene68421.t1 | MTR_3g035130 | 29.592 | 490 | 313 | 15 | 83 | 556 | 32 | 505 | 1.20e-37 | 146 |
| MS.gene68421.t1 | MTR_8g074040 | 25.825 | 515 | 331 | 14 | 84 | 563 | 83 | 581 | 1.20e-36 | 144 |
| MS.gene68421.t1 | MTR_5g076240 | 27.432 | 514 | 314 | 16 | 84 | 555 | 41 | 537 | 2.86e-36 | 143 |
| MS.gene68421.t1 | MTR_2g044180 | 28.093 | 388 | 241 | 11 | 207 | 570 | 99 | 472 | 3.22e-35 | 138 |
| MS.gene68421.t1 | MTR_2g044180 | 28.346 | 381 | 235 | 11 | 207 | 563 | 190 | 556 | 9.28e-35 | 138 |
| MS.gene68421.t1 | MTR_5g008800 | 26.538 | 520 | 335 | 14 | 82 | 570 | 39 | 542 | 1.10e-33 | 135 |
| MS.gene68421.t1 | MTR_0803s0020 | 26.844 | 488 | 321 | 13 | 85 | 552 | 263 | 734 | 2.30e-33 | 136 |
| MS.gene68421.t1 | MTR_3g064420 | 25.660 | 530 | 335 | 16 | 82 | 568 | 43 | 556 | 2.90e-33 | 134 |
| MS.gene68421.t1 | MTR_8g074040 | 25.370 | 473 | 303 | 13 | 126 | 563 | 6 | 463 | 1.63e-31 | 128 |
| MS.gene68421.t1 | MTR_4g121600 | 27.513 | 378 | 242 | 12 | 207 | 563 | 190 | 556 | 8.52e-31 | 127 |
| MS.gene68421.t1 | MTR_5g008820 | 25.819 | 519 | 338 | 18 | 82 | 570 | 39 | 540 | 8.11e-30 | 124 |
| MS.gene68421.t1 | MTR_5g076220 | 25.407 | 492 | 318 | 11 | 105 | 558 | 61 | 541 | 1.20e-29 | 123 |
| MS.gene68421.t1 | MTR_2g030240 | 28.326 | 466 | 262 | 17 | 80 | 498 | 25 | 465 | 6.51e-29 | 121 |
| MS.gene68421.t1 | MTR_4g013210 | 28.158 | 380 | 229 | 11 | 212 | 558 | 70 | 438 | 3.07e-28 | 118 |
| MS.gene68421.t1 | MTR_8g074120 | 25.813 | 492 | 305 | 14 | 111 | 563 | 20 | 490 | 3.25e-28 | 119 |
| MS.gene68421.t1 | MTR_1g026350 | 41.447 | 152 | 80 | 3 | 22 | 170 | 9 | 154 | 3.94e-28 | 110 |
| MS.gene68421.t1 | MTR_3g035130 | 29.977 | 437 | 274 | 15 | 83 | 503 | 32 | 452 | 4.82e-28 | 117 |
| MS.gene68421.t1 | MTR_2g030240 | 28.852 | 305 | 185 | 8 | 216 | 498 | 77 | 371 | 3.01e-26 | 112 |
| MS.gene68421.t1 | MTR_0161s0050 | 25.349 | 501 | 309 | 19 | 105 | 556 | 61 | 545 | 7.88e-26 | 112 |
| MS.gene68421.t1 | MTR_4g011790 | 26.247 | 381 | 231 | 10 | 212 | 558 | 227 | 591 | 1.24e-25 | 111 |
| MS.gene68421.t1 | MTR_4g011790 | 26.064 | 376 | 228 | 10 | 212 | 553 | 227 | 586 | 3.45e-24 | 107 |
| MS.gene68421.t1 | MTR_5g076200 | 23.374 | 492 | 328 | 12 | 105 | 558 | 61 | 541 | 4.65e-24 | 106 |
| MS.gene68421.t1 | MTR_4g013210 | 27.989 | 368 | 204 | 12 | 212 | 558 | 70 | 397 | 1.97e-23 | 103 |
| MS.gene68421.t1 | MTR_4g011790 | 25.641 | 390 | 231 | 11 | 212 | 558 | 227 | 600 | 2.37e-23 | 104 |
| MS.gene68421.t1 | MTR_4g013210 | 27.989 | 368 | 204 | 12 | 212 | 558 | 222 | 549 | 1.13e-22 | 102 |
| MS.gene68421.t1 | MTR_5g023730 | 23.755 | 522 | 328 | 18 | 78 | 555 | 38 | 533 | 1.14e-22 | 102 |
| MS.gene68421.t1 | MTR_4g057755 | 50.562 | 89 | 43 | 1 | 409 | 496 | 32 | 120 | 7.08e-22 | 91.7 |
| MS.gene68421.t1 | MTR_4g013210 | 26.966 | 356 | 216 | 10 | 212 | 534 | 222 | 566 | 2.90e-21 | 98.2 |
| MS.gene68421.t1 | MTR_7g084850 | 23.601 | 572 | 362 | 21 | 53 | 566 | 170 | 724 | 1.59e-19 | 93.2 |
| MS.gene68421.t1 | MTR_1054s0020 | 25.000 | 480 | 327 | 13 | 98 | 565 | 311 | 769 | 2.81e-19 | 92.4 |
| MS.gene68421.t1 | MTR_7g109830 | 26.394 | 538 | 279 | 24 | 47 | 493 | 36 | 547 | 1.69e-18 | 89.7 |
| MS.gene68421.t1 | MTR_1g086600 | 27.933 | 358 | 176 | 13 | 212 | 498 | 243 | 589 | 7.55e-18 | 87.8 |
| MS.gene68421.t1 | MTR_8g099420 | 25.698 | 358 | 192 | 14 | 186 | 484 | 199 | 541 | 1.28e-17 | 87.0 |
| MS.gene68421.t1 | MTR_3g088890 | 52.381 | 63 | 30 | 0 | 468 | 530 | 10 | 72 | 4.77e-15 | 71.2 |
| MS.gene68421.t1 | MTR_2g098490 | 27.326 | 344 | 200 | 14 | 194 | 499 | 633 | 964 | 8.24e-14 | 75.5 |
| MS.gene68421.t1 | MTR_3g084470 | 28.571 | 252 | 130 | 7 | 355 | 566 | 469 | 710 | 1.10e-13 | 74.7 |
| MS.gene68421.t1 | MTR_8g035620 | 22.885 | 520 | 345 | 12 | 82 | 559 | 117 | 622 | 2.83e-13 | 73.6 |
| MS.gene68421.t1 | MTR_3g084450 | 32.609 | 184 | 94 | 5 | 355 | 518 | 265 | 438 | 5.32e-13 | 72.0 |
| MS.gene68421.t1 | MTR_3g084450 | 32.609 | 184 | 94 | 5 | 355 | 518 | 473 | 646 | 7.90e-13 | 71.6 |
| MS.gene68421.t1 | MTR_8g083170 | 29.358 | 218 | 127 | 7 | 334 | 536 | 459 | 664 | 1.39e-12 | 70.9 |
| MS.gene68421.t1 | MTR_4g013210 | 27.208 | 283 | 155 | 10 | 212 | 483 | 222 | 464 | 2.83e-11 | 66.6 |
| MS.gene68421.t1 | MTR_1g030290 | 30.864 | 162 | 100 | 6 | 335 | 488 | 426 | 583 | 7.46e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68421.t1 | AT1G20510 | 45.620 | 548 | 281 | 8 | 18 | 559 | 1 | 537 | 4.21e-156 | 458 |
| MS.gene68421.t1 | AT4G05160 | 43.013 | 551 | 297 | 6 | 24 | 566 | 3 | 544 | 3.04e-147 | 435 |
| MS.gene68421.t1 | AT1G20500 | 43.382 | 544 | 285 | 8 | 28 | 559 | 11 | 543 | 9.16e-147 | 434 |
| MS.gene68421.t1 | AT4G19010 | 43.438 | 541 | 286 | 9 | 27 | 558 | 25 | 554 | 1.22e-140 | 419 |
| MS.gene68421.t1 | AT5G38120 | 42.647 | 544 | 288 | 9 | 28 | 559 | 12 | 543 | 4.42e-138 | 412 |
| MS.gene68421.t1 | AT1G20480 | 42.599 | 554 | 283 | 12 | 22 | 558 | 22 | 557 | 1.80e-135 | 406 |
| MS.gene68421.t1 | AT5G63380 | 43.038 | 553 | 285 | 12 | 22 | 558 | 12 | 550 | 7.44e-135 | 404 |
| MS.gene68421.t1 | AT1G20510 | 43.595 | 484 | 256 | 8 | 18 | 495 | 1 | 473 | 4.41e-123 | 371 |
| MS.gene68421.t1 | AT5G38120 | 41.165 | 515 | 279 | 9 | 28 | 530 | 12 | 514 | 1.23e-120 | 366 |
| MS.gene68421.t1 | AT1G20510 | 41.991 | 462 | 251 | 8 | 18 | 473 | 1 | 451 | 3.35e-110 | 337 |
| MS.gene68421.t1 | AT1G65060 | 41.309 | 489 | 276 | 5 | 78 | 558 | 71 | 556 | 2.12e-108 | 336 |
| MS.gene68421.t1 | AT5G38120 | 40.417 | 480 | 262 | 9 | 28 | 495 | 12 | 479 | 2.39e-107 | 330 |
| MS.gene68421.t1 | AT5G38120 | 40.417 | 480 | 262 | 9 | 28 | 495 | 12 | 479 | 2.39e-107 | 330 |
| MS.gene68421.t1 | AT3G21240 | 39.370 | 508 | 277 | 8 | 70 | 558 | 51 | 546 | 5.13e-107 | 332 |
| MS.gene68421.t1 | AT1G62940 | 40.927 | 496 | 280 | 6 | 71 | 558 | 42 | 532 | 1.19e-104 | 326 |
| MS.gene68421.t1 | AT3G21230 | 40.354 | 508 | 286 | 6 | 65 | 558 | 56 | 560 | 5.53e-104 | 325 |
| MS.gene68421.t1 | AT1G51680 | 39.759 | 498 | 276 | 7 | 79 | 558 | 62 | 553 | 1.24e-97 | 308 |
| MS.gene68421.t1 | AT3G21230 | 39.583 | 480 | 273 | 6 | 65 | 530 | 56 | 532 | 1.12e-91 | 292 |
| MS.gene68421.t1 | AT1G51680 | 38.655 | 476 | 268 | 7 | 73 | 530 | 56 | 525 | 2.47e-85 | 275 |
| MS.gene68421.t1 | AT3G21240 | 38.215 | 437 | 253 | 8 | 70 | 494 | 51 | 482 | 2.67e-80 | 261 |
| MS.gene68421.t1 | AT3G21240 | 38.215 | 437 | 253 | 8 | 70 | 494 | 51 | 482 | 2.67e-80 | 261 |
| MS.gene68421.t1 | AT1G20490 | 37.123 | 431 | 244 | 10 | 28 | 443 | 11 | 429 | 1.26e-79 | 258 |
| MS.gene68421.t1 | AT1G20490 | 37.123 | 431 | 244 | 10 | 28 | 443 | 11 | 429 | 1.26e-79 | 258 |
| MS.gene68421.t1 | AT3G21230 | 39.101 | 445 | 254 | 6 | 64 | 494 | 55 | 496 | 2.00e-79 | 259 |
| MS.gene68421.t1 | AT1G65060 | 38.670 | 406 | 238 | 5 | 78 | 475 | 71 | 473 | 6.91e-74 | 244 |
| MS.gene68421.t1 | AT1G51680 | 37.955 | 440 | 249 | 7 | 73 | 494 | 56 | 489 | 3.11e-72 | 239 |
| MS.gene68421.t1 | AT3G21230 | 34.853 | 373 | 226 | 6 | 65 | 423 | 56 | 425 | 3.07e-44 | 163 |
| MS.gene68421.t1 | AT3G48990 | 30.061 | 489 | 314 | 12 | 82 | 556 | 30 | 504 | 1.86e-41 | 157 |
| MS.gene68421.t1 | AT1G65880 | 27.920 | 548 | 323 | 17 | 82 | 569 | 32 | 567 | 1.02e-39 | 153 |
| MS.gene68421.t1 | AT1G30520 | 27.387 | 555 | 328 | 16 | 71 | 568 | 21 | 557 | 9.11e-39 | 150 |
| MS.gene68421.t1 | AT1G30520 | 27.387 | 555 | 328 | 16 | 71 | 568 | 21 | 557 | 9.11e-39 | 150 |
| MS.gene68421.t1 | AT1G21540 | 27.660 | 517 | 320 | 15 | 79 | 555 | 37 | 539 | 6.11e-38 | 147 |
| MS.gene68421.t1 | AT1G65890 | 27.170 | 530 | 320 | 17 | 82 | 558 | 32 | 548 | 2.69e-37 | 146 |
| MS.gene68421.t1 | AT1G20560 | 26.628 | 522 | 332 | 15 | 84 | 570 | 43 | 548 | 4.32e-35 | 139 |
| MS.gene68421.t1 | AT1G21530 | 25.869 | 518 | 327 | 14 | 78 | 555 | 38 | 538 | 2.70e-34 | 137 |
| MS.gene68421.t1 | AT1G77240 | 25.725 | 517 | 330 | 15 | 77 | 555 | 34 | 534 | 3.08e-34 | 137 |
| MS.gene68421.t1 | AT1G21530 | 26.104 | 521 | 320 | 15 | 78 | 555 | 38 | 536 | 6.85e-34 | 135 |
| MS.gene68421.t1 | AT5G16370 | 25.294 | 510 | 336 | 14 | 79 | 555 | 37 | 534 | 4.68e-33 | 133 |
| MS.gene68421.t1 | AT1G66120 | 27.203 | 522 | 323 | 17 | 82 | 558 | 32 | 541 | 1.98e-32 | 132 |
| MS.gene68421.t1 | AT1G75960 | 25.882 | 510 | 329 | 13 | 84 | 558 | 42 | 537 | 9.84e-31 | 126 |
| MS.gene68421.t1 | AT1G20560 | 26.525 | 377 | 253 | 9 | 207 | 570 | 105 | 470 | 1.31e-30 | 125 |
| MS.gene68421.t1 | AT5G16340 | 24.361 | 509 | 342 | 13 | 79 | 555 | 37 | 534 | 5.08e-30 | 124 |
| MS.gene68421.t1 | AT1G30520 | 27.115 | 461 | 274 | 14 | 71 | 490 | 21 | 460 | 6.70e-30 | 123 |
| MS.gene68421.t1 | AT1G30520 | 27.115 | 461 | 274 | 14 | 71 | 490 | 21 | 460 | 6.70e-30 | 123 |
| MS.gene68421.t1 | AT3G16910 | 28.158 | 380 | 237 | 14 | 207 | 563 | 193 | 559 | 2.05e-29 | 123 |
| MS.gene68421.t1 | AT3G16170 | 26.649 | 379 | 233 | 11 | 212 | 558 | 235 | 600 | 2.33e-27 | 117 |
| MS.gene68421.t1 | AT2G17650 | 25.192 | 520 | 324 | 17 | 84 | 555 | 88 | 590 | 1.42e-24 | 108 |
| MS.gene68421.t1 | AT1G76290 | 24.288 | 527 | 340 | 18 | 73 | 559 | 23 | 530 | 1.95e-24 | 107 |
| MS.gene68421.t1 | AT1G68270 | 25.094 | 530 | 301 | 18 | 82 | 558 | 32 | 518 | 5.22e-24 | 106 |
| MS.gene68421.t1 | AT5G27600 | 25.160 | 469 | 263 | 20 | 83 | 481 | 119 | 569 | 2.69e-20 | 95.5 |
| MS.gene68421.t1 | AT5G36880 | 23.660 | 541 | 351 | 18 | 76 | 566 | 191 | 719 | 1.76e-17 | 86.7 |
| MS.gene68421.t1 | AT5G36880 | 23.660 | 541 | 351 | 18 | 76 | 566 | 141 | 669 | 1.88e-17 | 86.7 |
| MS.gene68421.t1 | AT5G36880 | 23.660 | 541 | 351 | 18 | 76 | 566 | 141 | 669 | 1.88e-17 | 86.7 |
| MS.gene68421.t1 | AT5G36880 | 23.660 | 541 | 351 | 18 | 76 | 566 | 141 | 669 | 1.88e-17 | 86.7 |
| MS.gene68421.t1 | AT5G36880 | 23.660 | 541 | 351 | 18 | 76 | 566 | 141 | 669 | 1.88e-17 | 86.7 |
| MS.gene68421.t1 | AT1G49430 | 26.479 | 355 | 191 | 14 | 196 | 493 | 210 | 551 | 2.05e-17 | 86.3 |
| MS.gene68421.t1 | AT2G47240 | 27.566 | 341 | 184 | 13 | 207 | 493 | 216 | 547 | 1.51e-16 | 83.6 |
| MS.gene68421.t1 | AT2G47240 | 27.566 | 341 | 184 | 13 | 207 | 493 | 216 | 547 | 1.51e-16 | 83.6 |
| MS.gene68421.t1 | AT2G47240 | 27.566 | 341 | 184 | 13 | 207 | 493 | 216 | 547 | 1.51e-16 | 83.6 |
| MS.gene68421.t1 | AT2G47240 | 27.566 | 341 | 184 | 13 | 207 | 493 | 157 | 488 | 1.86e-16 | 83.2 |
| MS.gene68421.t1 | AT1G77590 | 24.363 | 353 | 197 | 12 | 204 | 493 | 93 | 438 | 4.02e-16 | 82.0 |
| MS.gene68421.t1 | AT2G04350 | 24.576 | 354 | 185 | 15 | 204 | 488 | 268 | 608 | 4.61e-15 | 79.0 |
| MS.gene68421.t1 | AT2G04350 | 24.576 | 354 | 185 | 15 | 204 | 488 | 268 | 608 | 4.61e-15 | 79.0 |
| MS.gene68421.t1 | AT5G35930 | 23.495 | 515 | 335 | 16 | 84 | 553 | 59 | 559 | 5.13e-11 | 66.2 |
Find 130 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCAATGTTTCATGTCTA+TGG | 0.176321 | 1.3:+63535264 | MS.gene68421:CDS |
| ACCCTTCTCACTTTCTTATA+TGG | 0.212821 | 1.3:-63536671 | None:intergenic |
| ATCAGCTTTCCACATGCTTC+TGG | 0.219682 | 1.3:-63535630 | None:intergenic |
| GGACTGATGTTCTTTGGATT+TGG | 0.232726 | 1.3:+63535285 | MS.gene68421:CDS |
| GAATGGTAAATTCCTGTTCT+TGG | 0.248189 | 1.3:-63534568 | None:intergenic |
| GTCTATGGACTGATGTTCTT+TGG | 0.250992 | 1.3:+63535279 | MS.gene68421:CDS |
| GTTGAGTACAAGATTGAGTT+TGG | 0.273727 | 1.3:-63534829 | None:intergenic |
| TAACTGCTGCATCAACAATA+AGG | 0.276654 | 1.3:-63536099 | None:intergenic |
| GCCGCTATACTTTACTCTTC+AGG | 0.280862 | 1.3:+63535123 | MS.gene68421:CDS |
| CCAGCAGAGCAGTTTCATTA+TGG | 0.284701 | 1.3:-63535196 | None:intergenic |
| ACCAATTTGTGTAACTCTTC+TGG | 0.296211 | 1.3:-63534970 | None:intergenic |
| GACTGATGTTCTTTGGATTT+GGG | 0.298826 | 1.3:+63535286 | MS.gene68421:CDS |
| CTTTGTTGGGATTTCATGTT+TGG | 0.301287 | 1.3:-63534608 | None:intergenic |
| CTCTGTCTCCATTTGATAAC+AGG | 0.330041 | 1.3:+63534533 | MS.gene68421:CDS |
| CATGTCATTCAATTTGTTGC+AGG | 0.341335 | 1.3:+63536280 | MS.gene68421:CDS |
| AATCAAGCACAAAGGGTATC+AGG | 0.343261 | 1.3:+63535878 | MS.gene68421:CDS |
| AAATGTCAGGAGAGGAGATT+TGG | 0.351734 | 1.3:+63534482 | None:intergenic |
| AAAGTGATAGACATTGAAAC+AGG | 0.356914 | 1.3:+63535669 | MS.gene68421:CDS |
| CTACATAGTTGAACGAATAA+AGG | 0.367598 | 1.3:+63535851 | MS.gene68421:CDS |
| AACTGCTGCATCAACAATAA+GGG | 0.374049 | 1.3:-63536098 | None:intergenic |
| CTTGCAACAGCTTTGTTCCA+TGG | 0.383330 | 1.3:+63534766 | MS.gene68421:CDS |
| TCAGGTAGCTCCTGCAGAAC+TGG | 0.384556 | 1.3:+63536054 | MS.gene68421:intron |
| ACCAGAAGAGTTACACAAAT+TGG | 0.386896 | 1.3:+63534969 | MS.gene68421:CDS |
| TCAGTTGAAGAGTTAATAGA+AGG | 0.392562 | 1.3:+63535048 | MS.gene68421:CDS |
| AGGGTTGAAGATGAAGAAAC+TGG | 0.395025 | 1.3:+63536202 | MS.gene68421:intron |
| CACCTGAGCCAACCCTTCTT+AGG | 0.395579 | 1.3:-63535470 | None:intergenic |
| GCGAAGCAAGTACATGATTC+AGG | 0.402603 | 1.3:+63534925 | MS.gene68421:CDS |
| CTTTACTCTTCAGGGACTAC+TGG | 0.405377 | 1.3:+63535132 | MS.gene68421:CDS |
| TATTTCCTTGGGTTGAACTA+AGG | 0.410515 | 1.3:+63535535 | MS.gene68421:CDS |
| GTTCAGAAAGCTATTTCCTT+GGG | 0.412932 | 1.3:+63535524 | MS.gene68421:CDS |
| TGTTGAGATCTGGCTTTGTT+GGG | 0.419272 | 1.3:-63534621 | None:intergenic |
| CCGCTATACTTTACTCTTCA+GGG | 0.425254 | 1.3:+63535124 | MS.gene68421:CDS |
| GTTGAACTAAGGGCGGGTTA+TGG | 0.435071 | 1.3:+63535546 | MS.gene68421:CDS |
| CCATAATGAAACTGCTCTGC+TGG | 0.435438 | 1.3:+63535196 | MS.gene68421:CDS |
| GTTCCTACAATTCTCACCTC+TGG | 0.439013 | 1.3:+63535003 | MS.gene68421:CDS |
| GTGTTGAGATCTGGCTTTGT+TGG | 0.439500 | 1.3:-63534622 | None:intergenic |
| AGCGGCTACGATCCAAGAAC+AGG | 0.444190 | 1.3:+63534556 | MS.gene68421:CDS |
| CATTCAATTTGTTGCAGGCC+AGG | 0.446682 | 1.3:+63536285 | MS.gene68421:CDS |
| GGATTTGGGTTGTTGTGTGT+TGG | 0.451406 | 1.3:+63535300 | MS.gene68421:CDS |
| TTTCAAGCTTAACAAGAGAA+TGG | 0.452313 | 1.3:-63534585 | None:intergenic |
| TTCACCAATGAGTGGATAAC+TGG | 0.452438 | 1.3:-63535414 | None:intergenic |
| GCTATTATGAAAGAATATCT+AGG | 0.453902 | 1.3:+63535741 | MS.gene68421:CDS |
| GTGATTTGTCTAGCCTAAGA+AGG | 0.457731 | 1.3:+63535457 | MS.gene68421:CDS |
| AGCACAGATTCCAGTTCTGC+AGG | 0.460066 | 1.3:-63536064 | None:intergenic |
| TGGATAACTGGTGGCACTGC+TGG | 0.462633 | 1.3:-63535402 | None:intergenic |
| AGAGTTGCAGTGTTGAGATC+TGG | 0.462977 | 1.3:-63534631 | None:intergenic |
| CTCACCTCTGGGACATCTGA+TGG | 0.463000 | 1.3:+63535015 | MS.gene68421:CDS |
| GTCCCAGAGGTGAGAATTGT+AGG | 0.467301 | 1.3:-63535006 | None:intergenic |
| CATGGACTTGAGATTAGAAA+AGG | 0.469403 | 1.3:+63534784 | MS.gene68421:CDS |
| TTACACAAATTGGTCCCAAC+TGG | 0.471916 | 1.3:+63534979 | MS.gene68421:CDS |
| GCATATGTGGTGAGGGCAGC+TGG | 0.475126 | 1.3:+63536238 | MS.gene68421:CDS |
| CAACAATTGATTCAGAAGGT+TGG | 0.475182 | 1.3:+63535784 | MS.gene68421:CDS |
| TAGCCGCTCCTGTTATCAAA+TGG | 0.484875 | 1.3:-63534541 | None:intergenic |
| TGGTTGAGGACAGGTGATCT+TGG | 0.485306 | 1.3:+63535804 | MS.gene68421:CDS |
| GCAGTGTCTGATTGCTCCAC+AGG | 0.486700 | 1.3:-63535102 | None:intergenic |
| TGATTTAGTATTGAGAGGGT+TGG | 0.488156 | 1.3:-63534896 | None:intergenic |
| GACATGAAACATTGGAATGA+AGG | 0.489639 | 1.3:-63535259 | None:intergenic |
| AGTTCAGAAAGCTATTTCCT+TGG | 0.490058 | 1.3:+63535523 | MS.gene68421:CDS |
| AGGTGCTGCACCTTTGAGTA+AGG | 0.492711 | 1.3:+63535488 | MS.gene68421:CDS |
| ATTTCCTTGGGTTGAACTAA+GGG | 0.492805 | 1.3:+63535536 | MS.gene68421:CDS |
| CCTTCCTTGAGTGGAGGCAA+AGG | 0.493651 | 1.3:-63535696 | None:intergenic |
| CTTGGTTATATCGATGAGAA+TGG | 0.496399 | 1.3:+63535822 | MS.gene68421:CDS |
| TTCACCAGATTCTTCTTCAA+CGG | 0.499514 | 1.3:-63534509 | None:intergenic |
| TAACTCTTCTGGTGCTGAGA+TGG | 0.504393 | 1.3:-63534959 | None:intergenic |
| ATGGACTAACAGAAAGTTGT+GGG | 0.505501 | 1.3:+63535565 | MS.gene68421:CDS |
| AGCCTAAGAAGGGTTGGCTC+AGG | 0.509742 | 1.3:+63535468 | MS.gene68421:CDS |
| AGGAGCTAATCAAGCACAAA+GGG | 0.511589 | 1.3:+63535871 | MS.gene68421:CDS |
| CATCAGCAAGATCTCCTTGT+GGG | 0.511833 | 1.3:-63534669 | None:intergenic |
| CACTCAAGGAAGGAGAGTTA+TGG | 0.515549 | 1.3:+63535706 | MS.gene68421:CDS |
| TCATCCGTTGAAGAAGAATC+TGG | 0.516179 | 1.3:+63534505 | MS.gene68421:CDS |
| GCCACCAGTTATCCACTCAT+TGG | 0.516190 | 1.3:+63535410 | MS.gene68421:CDS |
| TGTTTAGCTGTGTTATCAGT+TGG | 0.521525 | 1.3:+63534856 | MS.gene68421:CDS |
| GTGAAACATGCTAGCAAAGA+TGG | 0.522574 | 1.3:+63535432 | MS.gene68421:CDS |
| TTGATTCAGAAGGTTGGTTG+AGG | 0.524384 | 1.3:+63535790 | MS.gene68421:CDS |
| TCAGAAGGTTGGTTGAGGAC+AGG | 0.530736 | 1.3:+63535795 | MS.gene68421:CDS |
| TTTCTGATTTAGTATTGAGA+GGG | 0.531374 | 1.3:-63534900 | None:intergenic |
| GAAGCCTTTGCCTCCACTCA+AGG | 0.535824 | 1.3:+63535692 | MS.gene68421:CDS |
| TTCCTACAATTCTCACCTCT+GGG | 0.539856 | 1.3:+63535004 | MS.gene68421:CDS |
| ACTAATCATAGTGTAACTTA+CGG | 0.545558 | 1.3:+63534718 | MS.gene68421:CDS |
| CATGGAACAAAGCTGTTGCA+AGG | 0.549110 | 1.3:-63534765 | None:intergenic |
| CCTTGGGTTGAACTAAGGGC+GGG | 0.553742 | 1.3:+63535540 | MS.gene68421:CDS |
| TCCTTGGGTTGAACTAAGGG+CGG | 0.554693 | 1.3:+63535539 | MS.gene68421:CDS |
| AGAATTGTAGGAACTCCAGT+TGG | 0.555282 | 1.3:-63534994 | None:intergenic |
| AGTATACCGAGGTCAGCTGC+TGG | 0.555861 | 1.3:+63536707 | MS.gene68421:CDS |
| CATAACTCTCCTTCCTTGAG+TGG | 0.558671 | 1.3:-63535705 | None:intergenic |
| TTTGAGTAAGGAAATGTCAC+TGG | 0.559342 | 1.3:+63535500 | MS.gene68421:CDS |
| ACCAATGGCATATGTGGTGA+GGG | 0.561041 | 1.3:+63536231 | MS.gene68421:CDS |
| GCCCTCACCACATATGCCAT+TGG | 0.565672 | 1.3:-63536232 | None:intergenic |
| ATTTCTGATTTAGTATTGAG+AGG | 0.569356 | 1.3:-63534901 | None:intergenic |
| TTGTCTAGCCTAAGAAGGGT+TGG | 0.570054 | 1.3:+63535462 | MS.gene68421:CDS |
| GAATTGTAGGAACTCCAGTT+GGG | 0.571691 | 1.3:-63534993 | None:intergenic |
| AGAATATCTAGGAAATATTG+AGG | 0.571721 | 1.3:+63535752 | MS.gene68421:CDS |
| CTCACAACTTAGAAACAAGC+TGG | 0.574328 | 1.3:-63536769 | None:intergenic |
| CCTTTGCCTCCACTCAAGGA+AGG | 0.582843 | 1.3:+63535696 | MS.gene68421:CDS |
| AGTATTGAGAGGGTTGGCTG+TGG | 0.583867 | 1.3:-63534890 | None:intergenic |
| TGATTTGTCTAGCCTAAGAA+GGG | 0.587869 | 1.3:+63535458 | MS.gene68421:CDS |
| ATCTTGCCAGCAGCTGACCT+CGG | 0.591787 | 1.3:-63536713 | None:intergenic |
| TCCATATAAGAAAGTGAGAA+GGG | 0.594862 | 1.3:+63536670 | MS.gene68421:CDS |
| CTCCATATAAGAAAGTGAGA+AGG | 0.595321 | 1.3:+63536669 | MS.gene68421:CDS |
| TACCAATGGCATATGTGGTG+AGG | 0.595660 | 1.3:+63536230 | MS.gene68421:CDS |
| ACTGCAACAATTGATTCAGA+AGG | 0.598082 | 1.3:+63535780 | MS.gene68421:CDS |
| ACTGCTGCATCAACAATAAG+GGG | 0.600356 | 1.3:-63536097 | None:intergenic |
| AGTGACATTTCCTTACTCAA+AGG | 0.602475 | 1.3:-63535498 | None:intergenic |
| AACTCTCCTTCCTTGAGTGG+AGG | 0.608300 | 1.3:-63535702 | None:intergenic |
| GCAGATACCAATGGCATATG+TGG | 0.613364 | 1.3:+63536225 | MS.gene68421:CDS |
| AGTCCATAGACATGAAACAT+TGG | 0.615670 | 1.3:-63535267 | None:intergenic |
| AAGGAGCTAATCAAGCACAA+AGG | 0.617428 | 1.3:+63535870 | MS.gene68421:CDS |
| ATGGAACAAAGCTGTTGCAA+GGG | 0.623142 | 1.3:-63534764 | None:intergenic |
| GATTGCTCCACAGGAACATG+TGG | 0.623243 | 1.3:-63535093 | None:intergenic |
| CCCGCCCTTAGTTCAACCCA+AGG | 0.635164 | 1.3:-63535540 | None:intergenic |
| GGGACTACTGGAGTAAGCAA+AGG | 0.641617 | 1.3:+63535144 | MS.gene68421:CDS |
| GTGCTATCACAGTTCCCACA+AGG | 0.647014 | 1.3:+63534655 | MS.gene68421:CDS |
| CCCTGAAGAGTAAAGTATAG+CGG | 0.649066 | 1.3:-63535124 | None:intergenic |
| ACCAATGAGTGGATAACTGG+TGG | 0.649415 | 1.3:-63535411 | None:intergenic |
| GGGTTGAAGATGAAGAAACT+GGG | 0.650548 | 1.3:+63536203 | MS.gene68421:intron |
| AGAATTGCCACATGTTCCTG+TGG | 0.656792 | 1.3:+63535086 | MS.gene68421:CDS |
| AAAGCTCATCCAGAAGCATG+TGG | 0.657133 | 1.3:+63535621 | MS.gene68421:CDS |
| GAAACATTGGAATGAAGGCG+AGG | 0.657962 | 1.3:-63535254 | None:intergenic |
| AGAAACTGGGCAGATACCAA+TGG | 0.659161 | 1.3:+63536216 | MS.gene68421:CDS |
| TATGGACTAACAGAAAGTTG+TGG | 0.659761 | 1.3:+63535564 | MS.gene68421:CDS |
| CTGCAACAAATTGAATGACA+TGG | 0.661163 | 1.3:-63536279 | None:intergenic |
| TAGCATGTTTCACCAATGAG+TGG | 0.661752 | 1.3:-63535422 | None:intergenic |
| TCTCCATTTGATAACAGGAG+CGG | 0.663420 | 1.3:+63534538 | MS.gene68421:CDS |
| CTTCTCGATAGCGACAAGCA+TGG | 0.668123 | 1.3:-63535361 | None:intergenic |
| GCATCAGCAAGATCTCCTTG+TGG | 0.671856 | 1.3:-63534670 | None:intergenic |
| GGACTAACAGAAAGTTGTGG+GGG | 0.674978 | 1.3:+63535567 | MS.gene68421:CDS |
| TGGACTAACAGAAAGTTGTG+GGG | 0.694783 | 1.3:+63535566 | MS.gene68421:CDS |
| GGAGAGTTATGGTTGAAAAG+CGG | 0.697534 | 1.3:+63535717 | MS.gene68421:CDS |
| AAGTGATAGACATTGAAACA+GGG | 0.705961 | 1.3:+63535670 | MS.gene68421:CDS |
| CTTTCCATCAGATGTCCCAG+AGG | 0.738092 | 1.3:-63535019 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTTAACTTAAATAATC+AGG | - | chr1.3:63536428-63536447 | None:intergenic | 10.0% |
| !!! | AGTTTTTATTAATACATATA+TGG | + | chr1.3:63536021-63536040 | MS.gene68421:intron | 10.0% |
| !! | AGTAAATTACTTTAATTCTA+AGG | + | chr1.3:63535972-63535991 | MS.gene68421:intron | 15.0% |
| !!! | TTTGTATTTTAAACCTAATT+AGG | - | chr1.3:63536471-63536490 | None:intergenic | 15.0% |
| !! | AGAGAAATTAAAATGACTAT+AGG | - | chr1.3:63536605-63536624 | None:intergenic | 20.0% |
| !! | ATAAATAGTTTCAGTTTCAA+TGG | + | chr1.3:63535912-63535931 | MS.gene68421:intron | 20.0% |
| !! | ATGAAAATAAGAGTGAAAAT+AGG | - | chr1.3:63536144-63536163 | None:intergenic | 20.0% |
| !! | ATTGAAACTGAAACTATTTA+TGG | - | chr1.3:63535913-63535932 | None:intergenic | 20.0% |
| !!! | AAATAAATCTGAGAATTTTC+AGG | + | chr1.3:63536643-63536662 | MS.gene68421:intron | 20.0% |
| ! | AAAATAAGAGTGAAAATAGG+CGG | - | chr1.3:63536141-63536160 | None:intergenic | 25.0% |
| ! | ACTAATCATAGTGTAACTTA+CGG | + | chr1.3:63534718-63534737 | MS.gene68421:CDS | 25.0% |
| ! | AGAATATCTAGGAAATATTG+AGG | + | chr1.3:63535752-63535771 | MS.gene68421:CDS | 25.0% |
| ! | GCTATTATGAAAGAATATCT+AGG | + | chr1.3:63535741-63535760 | MS.gene68421:CDS | 25.0% |
| !! | ATTTCTGATTTAGTATTGAG+AGG | - | chr1.3:63534904-63534923 | None:intergenic | 25.0% |
| !! | TTTCTGATTTAGTATTGAGA+GGG | - | chr1.3:63534903-63534922 | None:intergenic | 25.0% |
| !!! | TTATTTTACTGCATGAAATC+AGG | - | chr1.3:63536327-63536346 | None:intergenic | 25.0% |
| AAAGTGATAGACATTGAAAC+AGG | + | chr1.3:63535669-63535688 | MS.gene68421:CDS | 30.0% | |
| AAGTGATAGACATTGAAACA+GGG | + | chr1.3:63535670-63535689 | MS.gene68421:CDS | 30.0% | |
| AGTTATTGCATCTAGATTGT+TGG | - | chr1.3:63536522-63536541 | None:intergenic | 30.0% | |
| ATTCCAATGTTTCATGTCTA+TGG | + | chr1.3:63535264-63535283 | MS.gene68421:CDS | 30.0% | |
| ATTGTTGGATGAATGTCATA+TGG | - | chr1.3:63536507-63536526 | None:intergenic | 30.0% | |
| CTACATAGTTGAACGAATAA+AGG | + | chr1.3:63535851-63535870 | MS.gene68421:CDS | 30.0% | |
| GTATCAAATTGAGTTTGGAA+CGG | + | chr1.3:63535994-63536013 | MS.gene68421:intron | 30.0% | |
| TATTCTGACTTCACCTAATT+AGG | + | chr1.3:63536455-63536474 | MS.gene68421:intron | 30.0% | |
| TCAGTTGAAGAGTTAATAGA+AGG | + | chr1.3:63535048-63535067 | MS.gene68421:CDS | 30.0% | |
| TCCATATAAGAAAGTGAGAA+GGG | + | chr1.3:63536670-63536689 | MS.gene68421:CDS | 30.0% | |
| TTTCAAGCTTAACAAGAGAA+TGG | - | chr1.3:63534588-63534607 | None:intergenic | 30.0% | |
| ! | CTAAGGTATCAAATTGAGTT+TGG | + | chr1.3:63535989-63536008 | MS.gene68421:intron | 30.0% |
| ! | TTGTAATCATTGTTGCTTAG+TGG | + | chr1.3:63536357-63536376 | MS.gene68421:intron | 30.0% |
| !! | ATCACTTTTGCACAAAAAGT+TGG | - | chr1.3:63535657-63535676 | None:intergenic | 30.0% |
| !! | TAAATCTGAGAATTTTCAGG+TGG | + | chr1.3:63536646-63536665 | MS.gene68421:intron | 30.0% |
| AACTGCTGCATCAACAATAA+GGG | - | chr1.3:63536101-63536120 | None:intergenic | 35.0% | |
| ACCAATTTGTGTAACTCTTC+TGG | - | chr1.3:63534973-63534992 | None:intergenic | 35.0% | |
| ACCAGAAGAGTTACACAAAT+TGG | + | chr1.3:63534969-63534988 | MS.gene68421:CDS | 35.0% | |
| ACCCTTCTCACTTTCTTATA+TGG | - | chr1.3:63536674-63536693 | None:intergenic | 35.0% | |
| AGTCCATAGACATGAAACAT+TGG | - | chr1.3:63535270-63535289 | None:intergenic | 35.0% | |
| AGTGACATTTCCTTACTCAA+AGG | - | chr1.3:63535501-63535520 | None:intergenic | 35.0% | |
| ATGTGGACAAAAAATGTTGC+AGG | + | chr1.3:63536182-63536201 | MS.gene68421:intron | 35.0% | |
| CATGGACTTGAGATTAGAAA+AGG | + | chr1.3:63534784-63534803 | MS.gene68421:CDS | 35.0% | |
| CTCCATATAAGAAAGTGAGA+AGG | + | chr1.3:63536669-63536688 | MS.gene68421:CDS | 35.0% | |
| CTGCAACAAATTGAATGACA+TGG | - | chr1.3:63536282-63536301 | None:intergenic | 35.0% | |
| CTTGGTTATATCGATGAGAA+TGG | + | chr1.3:63535822-63535841 | MS.gene68421:CDS | 35.0% | |
| CTTTGTTGGGATTTCATGTT+TGG | - | chr1.3:63534611-63534630 | None:intergenic | 35.0% | |
| GAATGGTAAATTCCTGTTCT+TGG | - | chr1.3:63534571-63534590 | None:intergenic | 35.0% | |
| GACATGAAACATTGGAATGA+AGG | - | chr1.3:63535262-63535281 | None:intergenic | 35.0% | |
| GACTGATGTTCTTTGGATTT+GGG | + | chr1.3:63535286-63535305 | MS.gene68421:CDS | 35.0% | |
| GTTGAGTACAAGATTGAGTT+TGG | - | chr1.3:63534832-63534851 | None:intergenic | 35.0% | |
| TAACTGCTGCATCAACAATA+AGG | - | chr1.3:63536102-63536121 | None:intergenic | 35.0% | |
| TGTGGACAAAAAATGTTGCA+GGG | + | chr1.3:63536183-63536202 | MS.gene68421:intron | 35.0% | |
| TGTTTAGCTGTGTTATCAGT+TGG | + | chr1.3:63534856-63534875 | MS.gene68421:CDS | 35.0% | |
| TTCACCAGATTCTTCTTCAA+CGG | - | chr1.3:63534512-63534531 | None:intergenic | 35.0% | |
| TTTGAGTAAGGAAATGTCAC+TGG | + | chr1.3:63535500-63535519 | MS.gene68421:CDS | 35.0% | |
| ! | AATCATTGTTGCTTAGTGGT+TGG | + | chr1.3:63536361-63536380 | MS.gene68421:intron | 35.0% |
| ! | ACTGCAACAATTGATTCAGA+AGG | + | chr1.3:63535780-63535799 | MS.gene68421:CDS | 35.0% |
| ! | AGTTCAGAAAGCTATTTCCT+TGG | + | chr1.3:63535523-63535542 | MS.gene68421:CDS | 35.0% |
| ! | ATATATGGATTGCTTGTGTC+AGG | + | chr1.3:63536036-63536055 | MS.gene68421:intron | 35.0% |
| ! | ATGGACTAACAGAAAGTTGT+GGG | + | chr1.3:63535565-63535584 | MS.gene68421:CDS | 35.0% |
| ! | CAACAATTGATTCAGAAGGT+TGG | + | chr1.3:63535784-63535803 | MS.gene68421:CDS | 35.0% |
| ! | CTTTTCTAATCTCAAGTCCA+TGG | - | chr1.3:63534786-63534805 | None:intergenic | 35.0% |
| ! | GTTCAGAAAGCTATTTCCTT+GGG | + | chr1.3:63535524-63535543 | MS.gene68421:CDS | 35.0% |
| ! | TATGGACTAACAGAAAGTTG+TGG | + | chr1.3:63535564-63535583 | MS.gene68421:CDS | 35.0% |
| ! | TGATTTAGTATTGAGAGGGT+TGG | - | chr1.3:63534899-63534918 | None:intergenic | 35.0% |
| ! | TGATTTGTCTAGCCTAAGAA+GGG | + | chr1.3:63535458-63535477 | MS.gene68421:CDS | 35.0% |
| !! | ATTTCCTTGGGTTGAACTAA+GGG | + | chr1.3:63535536-63535555 | MS.gene68421:CDS | 35.0% |
| !! | CATGTCATTCAATTTGTTGC+AGG | + | chr1.3:63536280-63536299 | MS.gene68421:CDS | 35.0% |
| !! | GTTTTATTGACAGTATACCG+AGG | + | chr1.3:63536696-63536715 | MS.gene68421:CDS | 35.0% |
| !! | TATTTCCTTGGGTTGAACTA+AGG | + | chr1.3:63535535-63535554 | MS.gene68421:CDS | 35.0% |
| AAGGAGCTAATCAAGCACAA+AGG | + | chr1.3:63535870-63535889 | MS.gene68421:CDS | 40.0% | |
| ACTGCTGCATCAACAATAAG+GGG | - | chr1.3:63536100-63536119 | None:intergenic | 40.0% | |
| AGAATTGTAGGAACTCCAGT+TGG | - | chr1.3:63534997-63535016 | None:intergenic | 40.0% | |
| AGGAGCTAATCAAGCACAAA+GGG | + | chr1.3:63535871-63535890 | MS.gene68421:CDS | 40.0% | |
| AGGGTTGAAGATGAAGAAAC+TGG | + | chr1.3:63536202-63536221 | MS.gene68421:intron | 40.0% | |
| ATAAGAGTGAAAATAGGCGG+AGG | - | chr1.3:63536138-63536157 | None:intergenic | 40.0% | |
| ATGGAACAAAGCTGTTGCAA+GGG | - | chr1.3:63534767-63534786 | None:intergenic | 40.0% | |
| CCCTGAAGAGTAAAGTATAG+CGG | - | chr1.3:63535127-63535146 | None:intergenic | 40.0% | |
| CCGCTATACTTTACTCTTCA+GGG | + | chr1.3:63535124-63535143 | MS.gene68421:CDS | 40.0% | |
| CTATAGGAAAACGAGAAAGC+AGG | - | chr1.3:63536589-63536608 | None:intergenic | 40.0% | |
| CTCTCTGTGACTTTCTTATG+TGG | + | chr1.3:63536165-63536184 | MS.gene68421:intron | 40.0% | |
| GAATTGTAGGAACTCCAGTT+GGG | - | chr1.3:63534996-63535015 | None:intergenic | 40.0% | |
| GGACTGATGTTCTTTGGATT+TGG | + | chr1.3:63535285-63535304 | MS.gene68421:CDS | 40.0% | |
| GGAGAGTTATGGTTGAAAAG+CGG | + | chr1.3:63535717-63535736 | MS.gene68421:CDS | 40.0% | |
| GGGTTGAAGATGAAGAAACT+GGG | + | chr1.3:63536203-63536222 | MS.gene68421:intron | 40.0% | |
| GTGAAACATGCTAGCAAAGA+TGG | + | chr1.3:63535432-63535451 | MS.gene68421:CDS | 40.0% | |
| TAAGAGTGAAAATAGGCGGA+GGG | - | chr1.3:63536137-63536156 | None:intergenic | 40.0% | |
| TAGCATGTTTCACCAATGAG+TGG | - | chr1.3:63535425-63535444 | None:intergenic | 40.0% | |
| TCATCCGTTGAAGAAGAATC+TGG | + | chr1.3:63534505-63534524 | MS.gene68421:CDS | 40.0% | |
| TGGACTAACAGAAAGTTGTG+GGG | + | chr1.3:63535566-63535585 | MS.gene68421:CDS | 40.0% | |
| TTACACAAATTGGTCCCAAC+TGG | + | chr1.3:63534979-63534998 | MS.gene68421:CDS | 40.0% | |
| TTCACCAATGAGTGGATAAC+TGG | - | chr1.3:63535417-63535436 | None:intergenic | 40.0% | |
| TTCCTACAATTCTCACCTCT+GGG | + | chr1.3:63535004-63535023 | MS.gene68421:CDS | 40.0% | |
| ! | CTCTGTCTCCATTTGATAAC+AGG | + | chr1.3:63534533-63534552 | MS.gene68421:CDS | 40.0% |
| ! | GTCTATGGACTGATGTTCTT+TGG | + | chr1.3:63535279-63535298 | MS.gene68421:CDS | 40.0% |
| ! | GTGATTTGTCTAGCCTAAGA+AGG | + | chr1.3:63535457-63535476 | MS.gene68421:CDS | 40.0% |
| ! | TCTCCATTTGATAACAGGAG+CGG | + | chr1.3:63534538-63534557 | MS.gene68421:CDS | 40.0% |
| ! | TTGATTCAGAAGGTTGGTTG+AGG | + | chr1.3:63535790-63535809 | MS.gene68421:CDS | 40.0% |
| !! | AATCAAGCACAAAGGGTATC+AGG | + | chr1.3:63535878-63535897 | MS.gene68421:CDS | 40.0% |
| !! | TGTTGAGATCTGGCTTTGTT+GGG | - | chr1.3:63534624-63534643 | None:intergenic | 40.0% |
| AAGAGTGAAAATAGGCGGAG+GGG | - | chr1.3:63536136-63536155 | None:intergenic | 45.0% | |
| ACCAATGAGTGGATAACTGG+TGG | - | chr1.3:63535414-63535433 | None:intergenic | 45.0% | |
| ACCAATGGCATATGTGGTGA+GGG | + | chr1.3:63536231-63536250 | MS.gene68421:CDS | 45.0% | |
| AGAAACTGGGCAGATACCAA+TGG | + | chr1.3:63536216-63536235 | MS.gene68421:CDS | 45.0% | |
| AGAATTGCCACATGTTCCTG+TGG | + | chr1.3:63535086-63535105 | MS.gene68421:CDS | 45.0% | |
| ATCAGCTTTCCACATGCTTC+TGG | - | chr1.3:63535633-63535652 | None:intergenic | 45.0% | |
| ATGAAATCAGGAGCCAAGAG+TGG | - | chr1.3:63536315-63536334 | None:intergenic | 45.0% | |
| CACTCAAGGAAGGAGAGTTA+TGG | + | chr1.3:63535706-63535725 | MS.gene68421:CDS | 45.0% | |
| CATAACTCTCCTTCCTTGAG+TGG | - | chr1.3:63535708-63535727 | None:intergenic | 45.0% | |
| CATCAGCAAGATCTCCTTGT+GGG | - | chr1.3:63534672-63534691 | None:intergenic | 45.0% | |
| CATGGAACAAAGCTGTTGCA+AGG | - | chr1.3:63534768-63534787 | None:intergenic | 45.0% | |
| CCAGCAGAGCAGTTTCATTA+TGG | - | chr1.3:63535199-63535218 | None:intergenic | 45.0% | |
| CCATAATGAAACTGCTCTGC+TGG | + | chr1.3:63535196-63535215 | MS.gene68421:CDS | 45.0% | |
| CTTTACTCTTCAGGGACTAC+TGG | + | chr1.3:63535132-63535151 | MS.gene68421:CDS | 45.0% | |
| GAAACATTGGAATGAAGGCG+AGG | - | chr1.3:63535257-63535276 | None:intergenic | 45.0% | |
| GCAGATACCAATGGCATATG+TGG | + | chr1.3:63536225-63536244 | MS.gene68421:CDS | 45.0% | |
| GCCGCTATACTTTACTCTTC+AGG | + | chr1.3:63535123-63535142 | MS.gene68421:CDS | 45.0% | |
| GCGAAGCAAGTACATGATTC+AGG | + | chr1.3:63534925-63534944 | MS.gene68421:CDS | 45.0% | |
| GGACTAACAGAAAGTTGTGG+GGG | + | chr1.3:63535567-63535586 | MS.gene68421:CDS | 45.0% | |
| GGAGCTAAGAGAAGCAGAAA+TGG | - | chr1.3:63536568-63536587 | None:intergenic | 45.0% | |
| GTTCCTACAATTCTCACCTC+TGG | + | chr1.3:63535003-63535022 | MS.gene68421:CDS | 45.0% | |
| TACCAATGGCATATGTGGTG+AGG | + | chr1.3:63536230-63536249 | MS.gene68421:CDS | 45.0% | |
| TAGCCGCTCCTGTTATCAAA+TGG | - | chr1.3:63534544-63534563 | None:intergenic | 45.0% | |
| TTGTCTAGCCTAAGAAGGGT+TGG | + | chr1.3:63535462-63535481 | MS.gene68421:CDS | 45.0% | |
| ! | AAAGCTCATCCAGAAGCATG+TGG | + | chr1.3:63535621-63535640 | MS.gene68421:CDS | 45.0% |
| ! | AGAGTTGCAGTGTTGAGATC+TGG | - | chr1.3:63534634-63534653 | None:intergenic | 45.0% |
| ! | TAACTCTTCTGGTGCTGAGA+TGG | - | chr1.3:63534962-63534981 | None:intergenic | 45.0% |
| !! | CATTCAATTTGTTGCAGGCC+AGG | + | chr1.3:63536285-63536304 | MS.gene68421:CDS | 45.0% |
| !! | CTTGCAACAGCTTTGTTCCA+TGG | + | chr1.3:63534766-63534785 | MS.gene68421:CDS | 45.0% |
| !! | GGATTTGGGTTGTTGTGTGT+TGG | + | chr1.3:63535300-63535319 | MS.gene68421:CDS | 45.0% |
| !! | GTGTTGAGATCTGGCTTTGT+TGG | - | chr1.3:63534625-63534644 | None:intergenic | 45.0% |
| AACTCTCCTTCCTTGAGTGG+AGG | - | chr1.3:63535705-63535724 | None:intergenic | 50.0% | |
| AGCACAGATTCCAGTTCTGC+AGG | - | chr1.3:63536067-63536086 | None:intergenic | 50.0% | |
| CTTCTCGATAGCGACAAGCA+TGG | - | chr1.3:63535364-63535383 | None:intergenic | 50.0% | |
| CTTTCCATCAGATGTCCCAG+AGG | - | chr1.3:63535022-63535041 | None:intergenic | 50.0% | |
| GATTGCTCCACAGGAACATG+TGG | - | chr1.3:63535096-63535115 | None:intergenic | 50.0% | |
| GCATCAGCAAGATCTCCTTG+TGG | - | chr1.3:63534673-63534692 | None:intergenic | 50.0% | |
| GCCACCAGTTATCCACTCAT+TGG | + | chr1.3:63535410-63535429 | MS.gene68421:CDS | 50.0% | |
| GGGACTACTGGAGTAAGCAA+AGG | + | chr1.3:63535144-63535163 | MS.gene68421:CDS | 50.0% | |
| GTCCCAGAGGTGAGAATTGT+AGG | - | chr1.3:63535009-63535028 | None:intergenic | 50.0% | |
| GTGCTATCACAGTTCCCACA+AGG | + | chr1.3:63534655-63534674 | MS.gene68421:CDS | 50.0% | |
| TGGTTGAGGACAGGTGATCT+TGG | + | chr1.3:63535804-63535823 | MS.gene68421:CDS | 50.0% | |
| ! | AGGTGCTGCACCTTTGAGTA+AGG | + | chr1.3:63535488-63535507 | MS.gene68421:CDS | 50.0% |
| ! | TCAGAAGGTTGGTTGAGGAC+AGG | + | chr1.3:63535795-63535814 | MS.gene68421:CDS | 50.0% |
| ! | TGTGGGGGAGCTACGTTTTT+CGG | + | chr1.3:63535582-63535601 | MS.gene68421:CDS | 50.0% |
| !! | AGTATTGAGAGGGTTGGCTG+TGG | - | chr1.3:63534893-63534912 | None:intergenic | 50.0% |
| !! | CAATTTGTTGCAGGCCAGGT+AGG | + | chr1.3:63536289-63536308 | MS.gene68421:intron | 50.0% |
| !! | GTTGAACTAAGGGCGGGTTA+TGG | + | chr1.3:63535546-63535565 | MS.gene68421:CDS | 50.0% |
| !! | TCCTTGGGTTGAACTAAGGG+CGG | + | chr1.3:63535539-63535558 | MS.gene68421:CDS | 50.0% |
| AATAGGCGGAGGGGATCGTA+CGG | - | chr1.3:63536127-63536146 | None:intergenic | 55.0% | |
| AGCGGCTACGATCCAAGAAC+AGG | + | chr1.3:63534556-63534575 | MS.gene68421:CDS | 55.0% | |
| AGTATACCGAGGTCAGCTGC+TGG | + | chr1.3:63536707-63536726 | MS.gene68421:CDS | 55.0% | |
| ATCTTGCCAGCAGCTGACCT+CGG | - | chr1.3:63536716-63536735 | None:intergenic | 55.0% | |
| CACCTGAGCCAACCCTTCTT+AGG | - | chr1.3:63535473-63535492 | None:intergenic | 55.0% | |
| CCTTCCTTGAGTGGAGGCAA+AGG | - | chr1.3:63535699-63535718 | None:intergenic | 55.0% | |
| CCTTTGCCTCCACTCAAGGA+AGG | + | chr1.3:63535696-63535715 | MS.gene68421:CDS | 55.0% | |
| GAAGCCTTTGCCTCCACTCA+AGG | + | chr1.3:63535692-63535711 | MS.gene68421:CDS | 55.0% | |
| GCAGTGTCTGATTGCTCCAC+AGG | - | chr1.3:63535105-63535124 | None:intergenic | 55.0% | |
| GCCCTCACCACATATGCCAT+TGG | - | chr1.3:63536235-63536254 | None:intergenic | 55.0% | |
| TCAGGTAGCTCCTGCAGAAC+TGG | + | chr1.3:63536054-63536073 | MS.gene68421:intron | 55.0% | |
| TGGATAACTGGTGGCACTGC+TGG | - | chr1.3:63535405-63535424 | None:intergenic | 55.0% | |
| ! | GTGGGGGAGCTACGTTTTTC+GGG | + | chr1.3:63535583-63535602 | MS.gene68421:CDS | 55.0% |
| !! | AGCCTAAGAAGGGTTGGCTC+AGG | + | chr1.3:63535468-63535487 | MS.gene68421:CDS | 55.0% |
| !! | CCTTGGGTTGAACTAAGGGC+GGG | + | chr1.3:63535540-63535559 | MS.gene68421:CDS | 55.0% |
| !! | CTCACCTCTGGGACATCTGA+TGG | + | chr1.3:63535015-63535034 | MS.gene68421:CDS | 55.0% |
| !!! | GGGAGCTACGTTTTTCGGGT+CGG | + | chr1.3:63535587-63535606 | MS.gene68421:CDS | 55.0% |
| CCCGCCCTTAGTTCAACCCA+AGG | - | chr1.3:63535543-63535562 | None:intergenic | 60.0% | |
| GCATATGTGGTGAGGGCAGC+TGG | + | chr1.3:63536238-63536257 | MS.gene68421:CDS | 60.0% | |
| CAGGCCAGGTAGGCCACTCT+TGG | + | chr1.3:63536299-63536318 | MS.gene68421:intron | 65.0% | |
| GGAGCCAAGAGTGGCCTACC+TGG | - | chr1.3:63536306-63536325 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 63534484 | 63536790 | 63534484 | ID=MS.gene68421 |
| chr1.3 | mRNA | 63534484 | 63536790 | 63534484 | ID=MS.gene68421.t1;Parent=MS.gene68421 |
| chr1.3 | exon | 63534484 | 63535899 | 63534484 | ID=MS.gene68421.t1.exon1;Parent=MS.gene68421.t1 |
| chr1.3 | CDS | 63534484 | 63535899 | 63534484 | ID=cds.MS.gene68421.t1;Parent=MS.gene68421.t1 |
| chr1.3 | exon | 63536058 | 63536125 | 63536058 | ID=MS.gene68421.t1.exon2;Parent=MS.gene68421.t1 |
| chr1.3 | CDS | 63536058 | 63536125 | 63536058 | ID=cds.MS.gene68421.t1;Parent=MS.gene68421.t1 |
| chr1.3 | exon | 63536204 | 63536306 | 63536204 | ID=MS.gene68421.t1.exon3;Parent=MS.gene68421.t1 |
| chr1.3 | CDS | 63536204 | 63536306 | 63536204 | ID=cds.MS.gene68421.t1;Parent=MS.gene68421.t1 |
| chr1.3 | exon | 63536665 | 63536790 | 63536665 | ID=MS.gene68421.t1.exon4;Parent=MS.gene68421.t1 |
| chr1.3 | CDS | 63536665 | 63536790 | 63536665 | ID=cds.MS.gene68421.t1;Parent=MS.gene68421.t1 |
| Gene Sequence |
| Protein sequence |
