Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70325.t1 | RHN42994.1 | 98.3 | 286 | 5 | 0 | 1 | 286 | 1 | 286 | 2.30E-155 | 558.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70325.t1 | Q8GY88 | 67.8 | 214 | 67 | 2 | 71 | 282 | 80 | 293 | 4.6e-80 | 299.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70325.t1 | A0A396GU32 | 98.3 | 286 | 5 | 0 | 1 | 286 | 1 | 286 | 1.7e-155 | 558.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene70325 | 0.843248 | 1.57E-58 | -1.69E-46 |
| MS.gene049178 | MS.gene70325 | 0.807122 | 5.90E-50 | -1.69E-46 |
| MS.gene04917 | MS.gene70325 | 0.841173 | 5.58E-58 | -1.69E-46 |
| MS.gene049208 | MS.gene70325 | 0.811943 | 5.44E-51 | -1.69E-46 |
| MS.gene049322 | MS.gene70325 | 0.801464 | 8.89E-49 | -1.69E-46 |
| MS.gene049822 | MS.gene70325 | 0.826757 | 2.28E-54 | -1.69E-46 |
| MS.gene04991 | MS.gene70325 | -0.816133 | 6.47E-52 | -1.69E-46 |
| MS.gene050114 | MS.gene70325 | 0.832135 | 1.12E-55 | -1.69E-46 |
| MS.gene050317 | MS.gene70325 | 0.822822 | 1.93E-53 | -1.69E-46 |
| MS.gene050762 | MS.gene70325 | 0.805224 | 1.48E-49 | -1.69E-46 |
| MS.gene050763 | MS.gene70325 | 0.805637 | 1.21E-49 | -1.69E-46 |
| MS.gene051748 | MS.gene70325 | 0.802064 | 6.70E-49 | -1.69E-46 |
| MS.gene052434 | MS.gene70325 | 0.813369 | 2.65E-51 | -1.69E-46 |
| MS.gene052527 | MS.gene70325 | 0.803053 | 4.19E-49 | -1.69E-46 |
| MS.gene053677 | MS.gene70325 | 0.808098 | 3.66E-50 | -1.69E-46 |
| MS.gene055311 | MS.gene70325 | 0.815136 | 1.08E-51 | -1.69E-46 |
| MS.gene056752 | MS.gene70325 | 0.812484 | 4.14E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene70325 | -0.816456 | 5.48E-52 | -1.69E-46 |
| MS.gene058182 | MS.gene70325 | 0.81927 | 1.27E-52 | -1.69E-46 |
| MS.gene058638 | MS.gene70325 | 0.811621 | 6.39E-51 | -1.69E-46 |
| MS.gene058639 | MS.gene70325 | 0.824073 | 9.84E-54 | -1.69E-46 |
| MS.gene058758 | MS.gene70325 | 0.827056 | 1.93E-54 | -1.69E-46 |
| MS.gene059719 | MS.gene70325 | 0.928191 | 4.09E-92 | -1.69E-46 |
| MS.gene060084 | MS.gene70325 | 0.805695 | 1.18E-49 | -1.69E-46 |
| MS.gene060869 | MS.gene70325 | 0.83387 | 4.16E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70325.t1 | MTR_6g033510 | 29.915 | 234 | 159 | 2 | 40 | 273 | 49 | 277 | 3.72e-34 | 125 |
| MS.gene70325.t1 | MTR_6g033510 | 33.000 | 200 | 133 | 1 | 74 | 273 | 22 | 220 | 5.63e-34 | 124 |
| MS.gene70325.t1 | MTR_6g033510 | 33.000 | 200 | 133 | 1 | 74 | 273 | 77 | 275 | 2.17e-33 | 124 |
| MS.gene70325.t1 | MTR_6g033510 | 29.487 | 234 | 159 | 2 | 40 | 273 | 49 | 276 | 1.33e-32 | 122 |
| MS.gene70325.t1 | MTR_6g033510 | 30.144 | 209 | 141 | 2 | 40 | 248 | 49 | 252 | 2.87e-28 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70325.t1 | AT2G21940 | 60.769 | 260 | 98 | 3 | 22 | 281 | 40 | 295 | 1.32e-111 | 325 |
| MS.gene70325.t1 | AT2G21940 | 60.769 | 260 | 97 | 3 | 22 | 281 | 40 | 294 | 6.01e-111 | 323 |
| MS.gene70325.t1 | AT2G21940 | 60.769 | 260 | 97 | 3 | 22 | 281 | 40 | 294 | 6.01e-111 | 323 |
| MS.gene70325.t1 | AT2G21940 | 60.769 | 260 | 97 | 3 | 22 | 281 | 40 | 294 | 6.01e-111 | 323 |
| MS.gene70325.t1 | AT4G39540 | 56.089 | 271 | 115 | 3 | 16 | 282 | 23 | 293 | 5.64e-106 | 310 |
| MS.gene70325.t1 | AT4G39540 | 56.089 | 271 | 115 | 3 | 16 | 282 | 23 | 293 | 5.64e-106 | 310 |
| MS.gene70325.t1 | AT4G39540 | 54.122 | 279 | 116 | 4 | 16 | 282 | 23 | 301 | 2.26e-102 | 301 |
| MS.gene70325.t1 | AT2G21940 | 59.910 | 222 | 84 | 3 | 22 | 243 | 40 | 256 | 2.95e-92 | 275 |
| MS.gene70325.t1 | AT2G21940 | 59.910 | 222 | 84 | 3 | 22 | 243 | 40 | 256 | 2.95e-92 | 275 |
| MS.gene70325.t1 | AT2G21940 | 59.910 | 222 | 84 | 3 | 22 | 243 | 40 | 256 | 2.95e-92 | 275 |
| MS.gene70325.t1 | AT3G26900 | 36.000 | 200 | 116 | 2 | 75 | 273 | 75 | 263 | 6.63e-31 | 117 |
| MS.gene70325.t1 | AT3G26900 | 36.000 | 200 | 116 | 2 | 75 | 273 | 75 | 263 | 6.63e-31 | 117 |
| MS.gene70325.t1 | AT3G26900 | 36.000 | 200 | 116 | 2 | 75 | 273 | 75 | 263 | 6.63e-31 | 117 |
Find 68 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCACGGCTGCAATTCTTT+TGG | 0.328611 | 4.1:-9538143 | None:intergenic |
| TGCAGATATAGCAACAAAAC+TGG | 0.355991 | 4.1:+9538964 | MS.gene70325:intron |
| GCTGATATATTCAAGCTCTA+TGG | 0.360240 | 4.1:+9536084 | MS.gene70325:CDS |
| TGTTCTTATAACAATATTCC+AGG | 0.365109 | 4.1:+9533941 | MS.gene70325:CDS |
| CTGTTGTGCGGCCTATTAAT+TGG | 0.372746 | 4.1:+9537958 | MS.gene70325:CDS |
| CGTTATTCTCACACAATTCT+CGG | 0.402884 | 4.1:-9533840 | None:intergenic |
| TTGATTGAGGAAGAGGTTGA+TGG | 0.403718 | 4.1:+9536051 | MS.gene70325:CDS |
| GTAGCTTCAACATTGGAATC+TGG | 0.413868 | 4.1:+9535005 | MS.gene70325:intron |
| AAATGACAAGTTTATGCATC+AGG | 0.414811 | 4.1:-9537920 | None:intergenic |
| TTGCAGGCGCTAGAGCAAAT+TGG | 0.422109 | 4.1:+9539170 | MS.gene70325:intron |
| CATAAACTTGTCATTTCTAC+AGG | 0.428732 | 4.1:+9537927 | MS.gene70325:CDS |
| AAATTGACATGCAGGAATGA+TGG | 0.432438 | 4.1:+9535378 | MS.gene70325:intron |
| TGATACATTGATTGAGGAAG+AGG | 0.440199 | 4.1:+9536044 | MS.gene70325:CDS |
| ACCTCAATTGCAATTTCAGT+TGG | 0.443438 | 4.1:-9539013 | None:intergenic |
| GAGAATTGTGTGAGAATAAC+GGG | 0.444406 | 4.1:+9533842 | MS.gene70325:CDS |
| TACTCTTGTAGCTTCAACAT+TGG | 0.455200 | 4.1:+9534998 | MS.gene70325:intron |
| GGCTCTGGGAAGACAACTGT+GGG | 0.455572 | 4.1:+9535400 | MS.gene70325:CDS |
| TTCTCGGGTCGGGTAAGAAC+CGG | 0.470591 | 4.1:-9533824 | None:intergenic |
| TGTTCAAATGTTGCATCTAC+CGG | 0.470846 | 4.1:+9533805 | MS.gene70325:CDS |
| CATGCAGGAATGATGGGCTC+TGG | 0.472739 | 4.1:+9535385 | MS.gene70325:intron |
| TCCAACTGAAATTGCAATTG+AGG | 0.477103 | 4.1:+9539012 | MS.gene70325:CDS |
| CAGATTCTGCCGTATTTAAG+TGG | 0.478853 | 4.1:+9535256 | MS.gene70325:CDS |
| TCTCACACAATTCTCGGGTC+GGG | 0.489860 | 4.1:-9533834 | None:intergenic |
| CGAGAATTGTGTGAGAATAA+CGG | 0.490051 | 4.1:+9533841 | MS.gene70325:CDS |
| GTTTCCCCTTGAGGAAGAGT+TGG | 0.510532 | 4.1:+9535037 | MS.gene70325:CDS |
| TTCTAATGAGACTCTAGCAT+TGG | 0.514662 | 4.1:-9538591 | None:intergenic |
| TTATAGTGATACATTGATTG+AGG | 0.517101 | 4.1:+9536038 | MS.gene70325:intron |
| TTCTCACACAATTCTCGGGT+CGG | 0.518453 | 4.1:-9533835 | None:intergenic |
| AATTGACATGCAGGAATGAT+GGG | 0.520917 | 4.1:+9535379 | MS.gene70325:intron |
| AGATGTACCAGTGGAAGCAT+TGG | 0.540460 | 4.1:+9538120 | MS.gene70325:CDS |
| CTTGTCATTTCTACAGGTGG+AGG | 0.541169 | 4.1:+9537933 | MS.gene70325:CDS |
| AGAATCTTTCTTTCGCGAGA+AGG | 0.544258 | 4.1:+9536107 | MS.gene70325:CDS |
| TAACGGGTTGTTCTTTGAGT+CGG | 0.545142 | 4.1:+9533858 | MS.gene70325:CDS |
| TGAGGAAGAGTTGGTTCTGA+AGG | 0.546791 | 4.1:+9535046 | MS.gene70325:CDS |
| GGTTGTTCTTTGAGTCGGAC+CGG | 0.550470 | 4.1:+9533863 | MS.gene70325:CDS |
| GTTATTCTCACACAATTCTC+GGG | 0.550567 | 4.1:-9533839 | None:intergenic |
| GGGCGCTGTATATATGTTGT+TGG | 0.552480 | 4.1:+9535277 | MS.gene70325:CDS |
| CCTCTTCTACACGATGAAGC+AGG | 0.557589 | 4.1:+9538178 | MS.gene70325:CDS |
| TCGGTGCAAGAAGGTTTCTA+CGG | 0.564921 | 4.1:+9533910 | MS.gene70325:CDS |
| ATCTTTCTTTCGCGAGAAGG+AGG | 0.565809 | 4.1:+9536110 | MS.gene70325:CDS |
| ATACAGCGCCCACTTAAATA+CGG | 0.566584 | 4.1:-9535265 | None:intergenic |
| GGCCAAAAGAATTGCAGCCG+TGG | 0.570496 | 4.1:+9538141 | MS.gene70325:CDS |
| AAACTTGTCATTTCTACAGG+TGG | 0.573379 | 4.1:+9537930 | MS.gene70325:CDS |
| CTGCTTCATCGTGTAGAAGA+GGG | 0.582100 | 4.1:-9538177 | None:intergenic |
| TCAGAACCAACTCTTCCTCA+AGG | 0.583804 | 4.1:-9535043 | None:intergenic |
| CAGAACCAACTCTTCCTCAA+GGG | 0.586131 | 4.1:-9535042 | None:intergenic |
| ATGCAGGAATGATGGGCTCT+GGG | 0.586330 | 4.1:+9535386 | MS.gene70325:intron |
| CCTGCTTCATCGTGTAGAAG+AGG | 0.594223 | 4.1:-9538178 | None:intergenic |
| GCAGATATAGCAACAAAACT+GGG | 0.598728 | 4.1:+9538965 | MS.gene70325:intron |
| AGATTCTGCCGTATTTAAGT+GGG | 0.599085 | 4.1:+9535257 | MS.gene70325:CDS |
| CCAGGAAATATATGCACAAG+GGG | 0.600293 | 4.1:+9538083 | MS.gene70325:intron |
| GCCAAAAGAATTGCAGCCGT+GGG | 0.601812 | 4.1:+9538142 | MS.gene70325:CDS |
| AATGACAAGTTTATGCATCA+GGG | 0.602843 | 4.1:-9537919 | None:intergenic |
| AGGGCATAAGTTTCCCCTTG+AGG | 0.610167 | 4.1:+9535028 | MS.gene70325:CDS |
| TGAGACTCTAGCATTGGCGT+TGG | 0.610419 | 4.1:-9538585 | None:intergenic |
| GCTTCAACATTGGAATCTGG+AGG | 0.615047 | 4.1:+9535008 | MS.gene70325:intron |
| GGGCTCTGGGAAGACAACTG+TGG | 0.617107 | 4.1:+9535399 | MS.gene70325:CDS |
| AGGGCGAGAATTAGTTCCCA+CGG | 0.618683 | 4.1:-9538158 | None:intergenic |
| AGAACCAACTCTTCCTCAAG+GGG | 0.619441 | 4.1:-9535041 | None:intergenic |
| TCAGACGATTCGGTGCAAGA+AGG | 0.619552 | 4.1:+9533901 | MS.gene70325:CDS |
| TGCCAGGAAATATATGCACA+AGG | 0.620476 | 4.1:+9538081 | MS.gene70325:intron |
| GCCAGGAAATATATGCACAA+GGG | 0.635533 | 4.1:+9538082 | MS.gene70325:intron |
| TGTTTGGTTAGATGTACCAG+TGG | 0.652145 | 4.1:+9538111 | MS.gene70325:CDS |
| CTTCAACATTGGAATCTGGA+GGG | 0.659832 | 4.1:+9535009 | MS.gene70325:CDS |
| CAGGTGGAGGTGCTGTTGTG+CGG | 0.664050 | 4.1:+9537946 | MS.gene70325:CDS |
| CAGGAAATATATGCACAAGG+GGG | 0.768658 | 4.1:+9538084 | MS.gene70325:intron |
| AGCAGGAGATGCATACACTG+CGG | 0.783701 | 4.1:+9538195 | MS.gene70325:CDS |
| GCTCTGGGAAGACAACTGTG+GGG | 0.798287 | 4.1:+9535401 | MS.gene70325:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATGGATAATTAATATA+AGG | - | chr4.1:9538447-9538466 | None:intergenic | 10.0% |
| !! | ATTATGGATAATTAATATAA+GGG | - | chr4.1:9538446-9538465 | None:intergenic | 10.0% |
| !!! | AAGAAAATATTTTGTTTATT+TGG | - | chr4.1:9536579-9536598 | None:intergenic | 10.0% |
| !!! | ATATTAATTATCCATAATTT+TGG | + | chr4.1:9538448-9538467 | MS.gene70325:intron | 10.0% |
| !!! | ATTTTATATTTTTTGATTCA+TGG | + | chr4.1:9535968-9535987 | MS.gene70325:intron | 10.0% |
| !!! | TAATTTTTATACCAATTAAT+AGG | - | chr4.1:9537972-9537991 | None:intergenic | 10.0% |
| !!! | TTATTTTTAATCTCTATAAT+TGG | + | chr4.1:9537365-9537384 | MS.gene70325:intron | 10.0% |
| !! | ATGGTATATATATACTTAAA+AGG | - | chr4.1:9535196-9535215 | None:intergenic | 15.0% |
| !! | ATTCAAGTGATATTAAATTA+AGG | + | chr4.1:9535770-9535789 | MS.gene70325:intron | 15.0% |
| !! | TACATTTAATATTTGATATG+AGG | + | chr4.1:9535731-9535750 | MS.gene70325:intron | 15.0% |
| !! | TAGTACAAAATTTATCAAAT+AGG | + | chr4.1:9537242-9537261 | MS.gene70325:intron | 15.0% |
| !! | TATTATGCAATAGATAAAAA+CGG | + | chr4.1:9535805-9535824 | MS.gene70325:intron | 15.0% |
| !! | TGGTATATATATACTTAAAA+GGG | - | chr4.1:9535195-9535214 | None:intergenic | 15.0% |
| !!! | AAAGGTTTTAAGAAATAATT+AGG | + | chr4.1:9537124-9537143 | MS.gene70325:intron | 15.0% |
| !!! | AAGTAAGTTTTTATGAAATT+CGG | - | chr4.1:9538379-9538398 | None:intergenic | 15.0% |
| !!! | AATTATGTAGCATTTTTTTT+TGG | + | chr4.1:9535644-9535663 | MS.gene70325:intron | 15.0% |
| !!! | TCATAAAAACTTACTTTTAA+AGG | + | chr4.1:9538383-9538402 | MS.gene70325:intron | 15.0% |
| !! | AAATAACATTCAACAGAATT+TGG | - | chr4.1:9534206-9534225 | None:intergenic | 20.0% |
| !! | AATATCAGAAACAAAATGTA+AGG | - | chr4.1:9534979-9534998 | None:intergenic | 20.0% |
| !! | ATATATAGAAGCAGAAAATA+AGG | - | chr4.1:9536244-9536263 | None:intergenic | 20.0% |
| !! | ATCTTTACATGTATTTGTAT+GGG | + | chr4.1:9538051-9538070 | MS.gene70325:intron | 20.0% |
| !! | ATGTTTATTTCAAACAAAGT+TGG | - | chr4.1:9537063-9537082 | None:intergenic | 20.0% |
| !! | ATTATGCAATAGATAAAAAC+GGG | + | chr4.1:9535806-9535825 | MS.gene70325:intron | 20.0% |
| !! | ATTGATTGATTGTACATATA+TGG | + | chr4.1:9536778-9536797 | MS.gene70325:intron | 20.0% |
| !! | CGATTATATCAAATTAATAC+CGG | - | chr4.1:9536321-9536340 | None:intergenic | 20.0% |
| !! | GACAAAGCATATTATATTAA+GGG | + | chr4.1:9538252-9538271 | MS.gene70325:intron | 20.0% |
| !! | TAATAGTCAAACAGAATAAT+AGG | - | chr4.1:9537793-9537812 | None:intergenic | 20.0% |
| !! | TATATAGAAGCAGAAAATAA+GGG | - | chr4.1:9536243-9536262 | None:intergenic | 20.0% |
| !! | TGACAAAGCATATTATATTA+AGG | + | chr4.1:9538251-9538270 | MS.gene70325:intron | 20.0% |
| !! | TGTTTATTTCAAACAAAGTT+GGG | - | chr4.1:9537062-9537081 | None:intergenic | 20.0% |
| !! | TTATTTAATATGCTCATACT+TGG | + | chr4.1:9534910-9534929 | MS.gene70325:intron | 20.0% |
| !!! | AATATTTTTTTACGCAAGTT+TGG | - | chr4.1:9538477-9538496 | None:intergenic | 20.0% |
| !!! | TATTTTGATTGTTATCATCT+AGG | - | chr4.1:9538916-9538935 | None:intergenic | 20.0% |
| !!! | TTTTAATCTCTATAATCGTT+TGG | - | chr4.1:9537543-9537562 | None:intergenic | 20.0% |
| !!! | TTTTTACTAAAGTGGTTTTA+AGG | + | chr4.1:9537425-9537444 | MS.gene70325:intron | 20.0% |
| ! | AAAATGTAAGGATCCAAAAT+GGG | - | chr4.1:9534967-9534986 | None:intergenic | 25.0% |
| ! | AAGAATTATTAGATTCGCAT+CGG | - | chr4.1:9539143-9539162 | None:intergenic | 25.0% |
| ! | ACAAATTGAAATGGAGTTAA+AGG | - | chr4.1:9539061-9539080 | None:intergenic | 25.0% |
| ! | ACTACACTTTCAAAAACAAA+AGG | - | chr4.1:9534055-9534074 | None:intergenic | 25.0% |
| ! | AGTTATCTTAAAGAGCTTAT+TGG | - | chr4.1:9534510-9534529 | None:intergenic | 25.0% |
| ! | ATAACGTGATTAATATGCAA+AGG | + | chr4.1:9534234-9534253 | MS.gene70325:intron | 25.0% |
| ! | ATAGTTTACATTTATAGTCG+AGG | + | chr4.1:9536978-9536997 | MS.gene70325:intron | 25.0% |
| ! | ATCAAATGTACCATTTGAAT+AGG | + | chr4.1:9535560-9535579 | MS.gene70325:intron | 25.0% |
| ! | CAATACAAGTATGATTACTT+TGG | + | chr4.1:9535339-9535358 | MS.gene70325:intron | 25.0% |
| ! | CATCTTTACATGTATTTGTA+TGG | + | chr4.1:9538050-9538069 | MS.gene70325:intron | 25.0% |
| ! | CTACACTTTCAAAAACAAAA+GGG | - | chr4.1:9534054-9534073 | None:intergenic | 25.0% |
| ! | GTGATAGAAAATATATTCTC+AGG | - | chr4.1:9534744-9534763 | None:intergenic | 25.0% |
| ! | GTTTATTTCAAACAAAGTTG+GGG | - | chr4.1:9537061-9537080 | None:intergenic | 25.0% |
| ! | TAACGTGATTAATATGCAAA+GGG | + | chr4.1:9534235-9534254 | MS.gene70325:intron | 25.0% |
| ! | TAAGATATTGTGAATTGTTC+CGG | + | chr4.1:9537819-9537838 | MS.gene70325:intron | 25.0% |
| ! | TACAAATACATGTAAAGATG+AGG | - | chr4.1:9538050-9538069 | None:intergenic | 25.0% |
| ! | TGGGATGTAATTAAAGAAAT+AGG | - | chr4.1:9536217-9536236 | None:intergenic | 25.0% |
| ! | TGTACAATCAATCAATATAG+AGG | - | chr4.1:9536774-9536793 | None:intergenic | 25.0% |
| ! | TGTTCTTATAACAATATTCC+AGG | + | chr4.1:9533941-9533960 | MS.gene70325:CDS | 25.0% |
| ! | TTAAAGAGCTTATTGGATTA+AGG | - | chr4.1:9534503-9534522 | None:intergenic | 25.0% |
| ! | TTATGCAATAGATAAAAACG+GGG | + | chr4.1:9535807-9535826 | MS.gene70325:intron | 25.0% |
| ! | TTCTTTATTGCCTATTCAAA+TGG | - | chr4.1:9535573-9535592 | None:intergenic | 25.0% |
| ! | TTGAATATAATTGCATGTGT+CGG | - | chr4.1:9534387-9534406 | None:intergenic | 25.0% |
| ! | TTGCATATTAATCACGTTAT+AGG | - | chr4.1:9534234-9534253 | None:intergenic | 25.0% |
| ! | TTGTTAAATAACAGCTATAG+CGG | + | chr4.1:9537185-9537204 | MS.gene70325:intron | 25.0% |
| ! | TTTATTTCAAACAAAGTTGG+GGG | - | chr4.1:9537060-9537079 | None:intergenic | 25.0% |
| !! | AAAACAGTTACTTTGATTCA+TGG | + | chr4.1:9535925-9535944 | MS.gene70325:intron | 25.0% |
| !! | ATGTCTTTTTATCTTTTAGC+AGG | - | chr4.1:9537346-9537365 | None:intergenic | 25.0% |
| !! | GATCTATTCTGCAATTTTAT+TGG | - | chr4.1:9535232-9535251 | None:intergenic | 25.0% |
| !! | GATGACAATTTTTACTAAAG+TGG | + | chr4.1:9537417-9537436 | MS.gene70325:intron | 25.0% |
| !! | TGTCTTTTTATCTTTTAGCA+GGG | - | chr4.1:9537345-9537364 | None:intergenic | 25.0% |
| !! | TTAGCTATTCATTTTGTGAT+TGG | + | chr4.1:9535443-9535462 | MS.gene70325:CDS | 25.0% |
| !! | TTATAGTGATACATTGATTG+AGG | + | chr4.1:9536038-9536057 | MS.gene70325:intron | 25.0% |
| !! | TTGTAACAAGCTTTTATTGT+AGG | - | chr4.1:9537683-9537702 | None:intergenic | 25.0% |
| !!! | AAGCTCTTTAAGATAACTTT+TGG | + | chr4.1:9534512-9534531 | MS.gene70325:intron | 25.0% |
| !!! | ACAAGATCACTCTTTTTTAT+TGG | - | chr4.1:9538837-9538856 | None:intergenic | 25.0% |
| !!! | ACTGATTTGAACCATATTAA+TGG | - | chr4.1:9537458-9537477 | None:intergenic | 25.0% |
| !!! | CATTTCAATTTGTTAGCTTT+GGG | + | chr4.1:9539068-9539087 | MS.gene70325:intron | 25.0% |
| !!! | TACAATAAAAGCTTGTTACA+AGG | + | chr4.1:9537682-9537701 | MS.gene70325:intron | 25.0% |
| !!! | TATTGGTTCAAGTAAGAAAA+TGG | - | chr4.1:9535215-9535234 | None:intergenic | 25.0% |
| !!! | TCTTAAAACCTTTTTAAGAG+AGG | - | chr4.1:9537117-9537136 | None:intergenic | 25.0% |
| !!! | TGATGGTTTTGCTTAAAAAA+TGG | - | chr4.1:9535141-9535160 | None:intergenic | 25.0% |
| !!! | TTTTGTCATTATTTAAAGCG+AGG | + | chr4.1:9534077-9534096 | MS.gene70325:intron | 25.0% |
| AAATGACAAGTTTATGCATC+AGG | - | chr4.1:9537923-9537942 | None:intergenic | 30.0% | |
| AACAAAAGATCCGTAAATGT+GGG | - | chr4.1:9536658-9536677 | None:intergenic | 30.0% | |
| AACATTCAACAGAATTTGGA+AGG | - | chr4.1:9534202-9534221 | None:intergenic | 30.0% | |
| AATCAGCAAGACCTATAATA+TGG | - | chr4.1:9535994-9536013 | None:intergenic | 30.0% | |
| AATCAGCAAGACTTGTAATA+TGG | - | chr4.1:9535951-9535970 | None:intergenic | 30.0% | |
| AATGACAAGTTTATGCATCA+GGG | - | chr4.1:9537922-9537941 | None:intergenic | 30.0% | |
| AATTTCTTGTCTTTGTTCAC+AGG | + | chr4.1:9535478-9535497 | MS.gene70325:intron | 30.0% | |
| ACTTGAATATGAACACTAGT+TGG | - | chr4.1:9535758-9535777 | None:intergenic | 30.0% | |
| AGAAATAATTAGGTGCTTAC+TGG | + | chr4.1:9537134-9537153 | MS.gene70325:intron | 30.0% | |
| ATAATTCTTCTGTATCTTGC+AGG | + | chr4.1:9539154-9539173 | MS.gene70325:intron | 30.0% | |
| ATACTTTCAAATTGACATGC+AGG | + | chr4.1:9535370-9535389 | MS.gene70325:intron | 30.0% | |
| ATATATTATAAGCTGCTCCA+AGG | + | chr4.1:9536258-9536277 | MS.gene70325:intron | 30.0% | |
| ATTTCTTGTCTTTGTTCACA+GGG | + | chr4.1:9535479-9535498 | MS.gene70325:intron | 30.0% | |
| CAAAATGTAAGGATCCAAAA+TGG | - | chr4.1:9534968-9534987 | None:intergenic | 30.0% | |
| CAAACAGAATAATAGGAGTT+AGG | - | chr4.1:9537786-9537805 | None:intergenic | 30.0% | |
| CAGATTCTGTAAGAAAAAAC+AGG | + | chr4.1:9538666-9538685 | MS.gene70325:intron | 30.0% | |
| CAGTTAATATGCTTCAATTC+AGG | - | chr4.1:9537604-9537623 | None:intergenic | 30.0% | |
| CCAAAGCTAACAAATTGAAA+TGG | - | chr4.1:9539070-9539089 | None:intergenic | 30.0% | |
| CGACAATGTAAATACATACA+AGG | - | chr4.1:9538698-9538717 | None:intergenic | 30.0% | |
| CTCTCATATTGTTAAAGTAG+AGG | - | chr4.1:9536849-9536868 | None:intergenic | 30.0% | |
| CTGATATTACTATCTGTTGA+TGG | - | chr4.1:9535158-9535177 | None:intergenic | 30.0% | |
| CTGTGAACAGTGTAATTAAT+TGG | - | chr4.1:9534003-9534022 | None:intergenic | 30.0% | |
| GAATATTTCTTCAACCAGTT+AGG | + | chr4.1:9536687-9536706 | MS.gene70325:intron | 30.0% | |
| GATTGATTGTACATATATGG+TGG | + | chr4.1:9536781-9536800 | MS.gene70325:intron | 30.0% | |
| TAAGCAAATTTGTAGATGCT+AGG | + | chr4.1:9534119-9534138 | MS.gene70325:intron | 30.0% | |
| TACATGTATTTGTATGGGAA+TGG | + | chr4.1:9538056-9538075 | MS.gene70325:intron | 30.0% | |
| TATGCAATAGATAAAAACGG+GGG | + | chr4.1:9535808-9535827 | MS.gene70325:intron | 30.0% | |
| TGACATCAACACTAATTAGA+AGG | - | chr4.1:9534427-9534446 | None:intergenic | 30.0% | |
| TGTATGTATTTACATTGTCG+TGG | + | chr4.1:9538698-9538717 | MS.gene70325:intron | 30.0% | |
| TGTTTAATTATAGCAGAACC+TGG | - | chr4.1:9533962-9533981 | None:intergenic | 30.0% | |
| TTAATTACACTGTTCACAGT+TGG | + | chr4.1:9534004-9534023 | MS.gene70325:intron | 30.0% | |
| TTCTACATACCAATTCATGA+TGG | + | chr4.1:9536494-9536513 | MS.gene70325:intron | 30.0% | |
| TTGATTCATGGCCATATTAT+AGG | + | chr4.1:9535980-9535999 | MS.gene70325:intron | 30.0% | |
| ! | AAAATAAGTGCTTCCCATTT+TGG | + | chr4.1:9534951-9534970 | MS.gene70325:intron | 30.0% |
| ! | AAGTTTGGTGACCAAAATTA+TGG | - | chr4.1:9538462-9538481 | None:intergenic | 30.0% |
| ! | ACACTTTTCCTTGAAATATG+CGG | - | chr4.1:9534875-9534894 | None:intergenic | 30.0% |
| ! | ACTAATTGATTCAGAACACT+AGG | - | chr4.1:9538751-9538770 | None:intergenic | 30.0% |
| ! | CAAAGTAACTGTTTTGCAAT+AGG | - | chr4.1:9535920-9535939 | None:intergenic | 30.0% |
| ! | CATAAACTTGTCATTTCTAC+AGG | + | chr4.1:9537927-9537946 | MS.gene70325:CDS | 30.0% |
| ! | CATTTGCTTTCTTGTTATGT+TGG | + | chr4.1:9537009-9537028 | MS.gene70325:intron | 30.0% |
| ! | GCTACACAATTTACATGTTT+TGG | - | chr4.1:9535517-9535536 | None:intergenic | 30.0% |
| ! | GGTTTTGCTTAAAAAATGGA+AGG | - | chr4.1:9535137-9535156 | None:intergenic | 30.0% |
| ! | TTATCAAATAGGTGCTATAG+TGG | + | chr4.1:9537253-9537272 | MS.gene70325:intron | 30.0% |
| !! | AAGCAGAAAATAAGGGTATT+GGG | - | chr4.1:9536236-9536255 | None:intergenic | 30.0% |
| !! | AAGGTACTGAACCATTAATA+TGG | + | chr4.1:9537444-9537463 | MS.gene70325:intron | 30.0% |
| !! | ACTCTATGATTTTGATCTCA+TGG | - | chr4.1:9534150-9534169 | None:intergenic | 30.0% |
| !! | CCATTTCAATTTGTTAGCTT+TGG | + | chr4.1:9539067-9539086 | MS.gene70325:intron | 30.0% |
| !! | TAAAACCTTTTTAAGAGAGG+AGG | - | chr4.1:9537114-9537133 | None:intergenic | 30.0% |
| !!! | AAAGCGAGGTTTTGTTTTTT+TGG | + | chr4.1:9534091-9534110 | MS.gene70325:intron | 30.0% |
| !!! | CTGTTTTTTCTTACAGAATC+TGG | - | chr4.1:9538668-9538687 | None:intergenic | 30.0% |
| !!! | TCACTCTTTTTTATTGGAGA+AGG | - | chr4.1:9538831-9538850 | None:intergenic | 30.0% |
| AAATTGACATGCAGGAATGA+TGG | + | chr4.1:9535378-9535397 | MS.gene70325:intron | 35.0% | |
| AACAGCATAATGTCTGATGA+TGG | + | chr4.1:9537732-9537751 | MS.gene70325:intron | 35.0% | |
| AACATGTTGAGTCACTTGAT+AGG | - | chr4.1:9537512-9537531 | None:intergenic | 35.0% | |
| AATGCTATTCAAGCATCCAA+TGG | - | chr4.1:9534810-9534829 | None:intergenic | 35.0% | |
| AATTGACATGCAGGAATGAT+GGG | + | chr4.1:9535379-9535398 | MS.gene70325:intron | 35.0% | |
| ACATGTTGAGTCACTTGATA+GGG | - | chr4.1:9537511-9537530 | None:intergenic | 35.0% | |
| ACCTCAATTGCAATTTCAGT+TGG | - | chr4.1:9539016-9539035 | None:intergenic | 35.0% | |
| AGATTCTGCCGTATTTAAGT+GGG | + | chr4.1:9535257-9535276 | MS.gene70325:CDS | 35.0% | |
| AGTTTGTAGAGACAGCAAAT+GGG | + | chr4.1:9536732-9536751 | MS.gene70325:intron | 35.0% | |
| ATCATACTTGTATTGCATGC+CGG | - | chr4.1:9535334-9535353 | None:intergenic | 35.0% | |
| ATGCAATAGATAAAAACGGG+GGG | + | chr4.1:9535809-9535828 | MS.gene70325:intron | 35.0% | |
| ATGTTGTTGGTCAGTTTCTT+TGG | + | chr4.1:9535290-9535309 | MS.gene70325:intron | 35.0% | |
| CAAATCCTCCTCTCTTAAAA+AGG | + | chr4.1:9537106-9537125 | MS.gene70325:intron | 35.0% | |
| CAACAAAAGATCCGTAAATG+TGG | - | chr4.1:9536659-9536678 | None:intergenic | 35.0% | |
| CGAGAATTGTGTGAGAATAA+CGG | + | chr4.1:9533841-9533860 | MS.gene70325:CDS | 35.0% | |
| CGTTATTCTCACACAATTCT+CGG | - | chr4.1:9533843-9533862 | None:intergenic | 35.0% | |
| GAGAATTGTGTGAGAATAAC+GGG | + | chr4.1:9533842-9533861 | MS.gene70325:CDS | 35.0% | |
| GCAGATATAGCAACAAAACT+GGG | + | chr4.1:9538965-9538984 | MS.gene70325:intron | 35.0% | |
| GCATATTTCAAGGAAAAGTG+TGG | + | chr4.1:9534874-9534893 | MS.gene70325:intron | 35.0% | |
| GCCAAATGTACCATTTGAAT+AGG | + | chr4.1:9535666-9535685 | MS.gene70325:intron | 35.0% | |
| GCCTATTCAAATGGTACATT+TGG | - | chr4.1:9535564-9535583 | None:intergenic | 35.0% | |
| GCTGAAATACCAATTCATGT+TGG | + | chr4.1:9536448-9536467 | MS.gene70325:intron | 35.0% | |
| GCTGATATATTCAAGCTCTA+TGG | + | chr4.1:9536084-9536103 | MS.gene70325:CDS | 35.0% | |
| GCTTGAATAGCATTTACTTC+TGG | + | chr4.1:9534816-9534835 | MS.gene70325:intron | 35.0% | |
| GGAATTTACCGCATATTTCA+AGG | + | chr4.1:9534864-9534883 | MS.gene70325:intron | 35.0% | |
| GTGATTAATATGCAAAGGGA+GGG | + | chr4.1:9534239-9534258 | MS.gene70325:intron | 35.0% | |
| GTTATTCTCACACAATTCTC+GGG | - | chr4.1:9533842-9533861 | None:intergenic | 35.0% | |
| TACTCTTGTAGCTTCAACAT+TGG | + | chr4.1:9534998-9535017 | MS.gene70325:intron | 35.0% | |
| TCCAACTGAAATTGCAATTG+AGG | + | chr4.1:9539012-9539031 | MS.gene70325:CDS | 35.0% | |
| TGAAAAAGCTTCAGACGATT+CGG | + | chr4.1:9533891-9533910 | MS.gene70325:CDS | 35.0% | |
| TGCAGATATAGCAACAAAAC+TGG | + | chr4.1:9538964-9538983 | MS.gene70325:intron | 35.0% | |
| TGGTACTCTACAATTAACAG+TGG | + | chr4.1:9536468-9536487 | MS.gene70325:intron | 35.0% | |
| TGTCAAGTACCATCATGAAT+TGG | - | chr4.1:9536506-9536525 | None:intergenic | 35.0% | |
| TGTTCAAATGTTGCATCTAC+CGG | + | chr4.1:9533805-9533824 | MS.gene70325:CDS | 35.0% | |
| TTACATTTATAGTCGAGGTC+TGG | + | chr4.1:9536983-9537002 | MS.gene70325:intron | 35.0% | |
| TTACTTGCAGAAATCCTAAC+TGG | - | chr4.1:9536704-9536723 | None:intergenic | 35.0% | |
| TTCATATGATCGTATCAGCT+GGG | + | chr4.1:9536947-9536966 | MS.gene70325:intron | 35.0% | |
| TTCTAATGAGACTCTAGCAT+TGG | - | chr4.1:9538594-9538613 | None:intergenic | 35.0% | |
| TTGTTTACCATTTCAGACTG+AGG | + | chr4.1:9537881-9537900 | MS.gene70325:intron | 35.0% | |
| TTTCATATGATCGTATCAGC+TGG | + | chr4.1:9536946-9536965 | MS.gene70325:intron | 35.0% | |
| ! | AAACTTGTCATTTCTACAGG+TGG | + | chr4.1:9537930-9537949 | MS.gene70325:CDS | 35.0% |
| ! | AAAGCAACATGTCTTTTAGC+AGG | + | chr4.1:9537560-9537579 | MS.gene70325:intron | 35.0% |
| ! | AAGCAACATGTCTTTTAGCA+GGG | + | chr4.1:9537561-9537580 | MS.gene70325:intron | 35.0% |
| ! | ACAAATCAGACGCATCTTTT+CGG | - | chr4.1:9538991-9539010 | None:intergenic | 35.0% |
| ! | ATTAAGCCAGCTTTTACCAT+TGG | + | chr4.1:9534791-9534810 | MS.gene70325:intron | 35.0% |
| ! | CTAGGAAGCATATAACATGA+AGG | - | chr4.1:9538898-9538917 | None:intergenic | 35.0% |
| ! | GAAGCAGAAAATAAGGGTAT+TGG | - | chr4.1:9536237-9536256 | None:intergenic | 35.0% |
| ! | GCAAATTGGCAACTTTTTGA+AGG | + | chr4.1:9539184-9539203 | MS.gene70325:CDS | 35.0% |
| ! | GGTAAAAGCTGGCTTAATAT+TGG | - | chr4.1:9534789-9534808 | None:intergenic | 35.0% |
| ! | TAGTTTGTAGAGACAGCAAA+TGG | + | chr4.1:9536731-9536750 | MS.gene70325:intron | 35.0% |
| ! | TGATACATTGATTGAGGAAG+AGG | + | chr4.1:9536044-9536063 | MS.gene70325:CDS | 35.0% |
| ! | TGTAGAGTACCAACATGAAT+TGG | - | chr4.1:9536460-9536479 | None:intergenic | 35.0% |
| !! | AACTTTTTGAAGGCAGAAGA+TGG | + | chr4.1:9539194-9539213 | MS.gene70325:CDS | 35.0% |
| !! | AAGAGAGGAGGATTTGTTTT+AGG | - | chr4.1:9537102-9537121 | None:intergenic | 35.0% |
| !! | ATTCGGTGTAATCAATGCAT+TGG | - | chr4.1:9538362-9538381 | None:intergenic | 35.0% |
| !! | TCTGATCTTTTTGAAGAGAG+AGG | + | chr4.1:9538551-9538570 | MS.gene70325:CDS | 35.0% |
| !!! | AGAGAGGAGGATTTGTTTTA+GGG | - | chr4.1:9537101-9537120 | None:intergenic | 35.0% |
| !!! | CTGAAGCTTTTTCAGTTTAC+CGG | - | chr4.1:9533885-9533904 | None:intergenic | 35.0% |
| !!! | GTTATGTTGGCTTCTAGTTT+TGG | + | chr4.1:9537022-9537041 | MS.gene70325:intron | 35.0% |
| !!! | TGGGAAGCACTTATTTTAGT+AGG | - | chr4.1:9534948-9534967 | None:intergenic | 35.0% |
| AAAACTAGAGCAAAATCCCC+AGG | - | chr4.1:9535849-9535868 | None:intergenic | 40.0% | |
| AAAGATCCGTAAATGTGGGA+CGG | - | chr4.1:9536654-9536673 | None:intergenic | 40.0% | |
| AAGCATCCAATGGTAAAAGC+TGG | - | chr4.1:9534800-9534819 | None:intergenic | 40.0% | |
| AATAGATAAAAACGGGGGGA+GGG | + | chr4.1:9535813-9535832 | MS.gene70325:intron | 40.0% | |
| ACCAGTTGTAATTCACATGC+AGG | + | chr4.1:9538514-9538533 | MS.gene70325:intron | 40.0% | |
| AGAATCTTTCTTTCGCGAGA+AGG | + | chr4.1:9536107-9536126 | MS.gene70325:CDS | 40.0% | |
| ATACAGCGCCCACTTAAATA+CGG | - | chr4.1:9535268-9535287 | None:intergenic | 40.0% | |
| ATCCAATCACAAGTAGCTCA+TGG | + | chr4.1:9534614-9534633 | MS.gene70325:intron | 40.0% | |
| CAAACCTGTAAAGTTGGACA+GGG | - | chr4.1:9536911-9536930 | None:intergenic | 40.0% | |
| CAATAGAACGTAACAGTGGA+TGG | - | chr4.1:9534544-9534563 | None:intergenic | 40.0% | |
| CAGATTCTGCCGTATTTAAG+TGG | + | chr4.1:9535256-9535275 | MS.gene70325:CDS | 40.0% | |
| CATGTTGAGTCACTTGATAG+GGG | - | chr4.1:9537510-9537529 | None:intergenic | 40.0% | |
| CGTGATTAATATGCAAAGGG+AGG | + | chr4.1:9534238-9534257 | MS.gene70325:intron | 40.0% | |
| CTAGTAACAAGCTGGTAAGA+GGG | - | chr4.1:9536815-9536834 | None:intergenic | 40.0% | |
| CTTCAACATTGGAATCTGGA+GGG | + | chr4.1:9535009-9535028 | MS.gene70325:CDS | 40.0% | |
| GCTACAATAGAACGTAACAG+TGG | - | chr4.1:9534548-9534567 | None:intergenic | 40.0% | |
| GTAGCTTCAACATTGGAATC+TGG | + | chr4.1:9535005-9535024 | MS.gene70325:intron | 40.0% | |
| TAGTAACAAGCTGGTAAGAG+GGG | - | chr4.1:9536814-9536833 | None:intergenic | 40.0% | |
| TCATACTTGTATTGCATGCC+GGG | - | chr4.1:9535333-9535352 | None:intergenic | 40.0% | |
| TGGGCAAACTGGAATATTCA+CGG | + | chr4.1:9539087-9539106 | MS.gene70325:intron | 40.0% | |
| TGTTGCCAAACCTGTAAAGT+TGG | - | chr4.1:9536917-9536936 | None:intergenic | 40.0% | |
| TGTTTGGTTAGATGTACCAG+TGG | + | chr4.1:9538111-9538130 | MS.gene70325:CDS | 40.0% | |
| TTCAATGCCTCAGTCTGAAA+TGG | - | chr4.1:9537891-9537910 | None:intergenic | 40.0% | |
| TTCCATGAGCTACTTGTGAT+TGG | - | chr4.1:9534619-9534638 | None:intergenic | 40.0% | |
| TTCTGATCCAAAGTGTGTTC+AGG | + | chr4.1:9534335-9534354 | MS.gene70325:intron | 40.0% | |
| TTGATTGAGGAAGAGGTTGA+TGG | + | chr4.1:9536051-9536070 | MS.gene70325:CDS | 40.0% | |
| TTGTGTGTGATTAGTGACCA+GGG | + | chr4.1:9537304-9537323 | MS.gene70325:intron | 40.0% | |
| ! | ACTTTGGATCAGAAGTGTGT+CGG | - | chr4.1:9534329-9534348 | None:intergenic | 40.0% |
| ! | AGCAACATGTCTTTTAGCAG+GGG | + | chr4.1:9537562-9537581 | MS.gene70325:intron | 40.0% |
| ! | GAAATGGAGTTAAAGGCATG+AGG | - | chr4.1:9539054-9539073 | None:intergenic | 40.0% |
| ! | GTGACTATTAGGGGAGTTTT+GGG | - | chr4.1:9534709-9534728 | None:intergenic | 40.0% |
| ! | TAGGGGTGTACATCAATACA+TGG | - | chr4.1:9537493-9537512 | None:intergenic | 40.0% |
| ! | TGTGACTATTAGGGGAGTTT+TGG | - | chr4.1:9534710-9534729 | None:intergenic | 40.0% |
| ! | TGTTTTGCAATAGGCAGATG+TGG | - | chr4.1:9535911-9535930 | None:intergenic | 40.0% |
| !! | ATGTCTGATGATGGCATGTA+CGG | + | chr4.1:9537741-9537760 | MS.gene70325:intron | 40.0% |
| !! | TAACGGGTTGTTCTTTGAGT+CGG | + | chr4.1:9533858-9533877 | MS.gene70325:CDS | 40.0% |
| !! | TTTGTTAGCTTTGGGCAAAC+TGG | + | chr4.1:9539076-9539095 | MS.gene70325:intron | 40.0% |
| !! | TTTTTGAAGGCAGAAGATGG+TGG | + | chr4.1:9539197-9539216 | MS.gene70325:CDS | 40.0% |
| AGAACCAACTCTTCCTCAAG+GGG | - | chr4.1:9535044-9535063 | None:intergenic | 45.0% | |
| AGTAACAAGCTGGTAAGAGG+GGG | - | chr4.1:9536813-9536832 | None:intergenic | 45.0% | |
| ATAGATAAAAACGGGGGGAG+GGG | + | chr4.1:9535814-9535833 | MS.gene70325:intron | 45.0% | |
| ATATTGATCTCCCGTCTCCT+TGG | - | chr4.1:9536278-9536297 | None:intergenic | 45.0% | |
| ATCTTTCTTTCGCGAGAAGG+AGG | + | chr4.1:9536110-9536129 | MS.gene70325:CDS | 45.0% | |
| CAAGCTGGTGTGACTATTAG+GGG | - | chr4.1:9534718-9534737 | None:intergenic | 45.0% | |
| CAATAGATAAAAACGGGGGG+AGG | + | chr4.1:9535812-9535831 | MS.gene70325:intron | 45.0% | |
| CAGAACCAACTCTTCCTCAA+GGG | - | chr4.1:9535045-9535064 | None:intergenic | 45.0% | |
| CATTTATAGTCGAGGTCTGG+AGG | + | chr4.1:9536986-9537005 | MS.gene70325:intron | 45.0% | |
| CCAAACCTGTAAAGTTGGAC+AGG | - | chr4.1:9536912-9536931 | None:intergenic | 45.0% | |
| CCAAGCTGGTGTGACTATTA+GGG | - | chr4.1:9534719-9534738 | None:intergenic | 45.0% | |
| CCTAGTAACAAGCTGGTAAG+AGG | - | chr4.1:9536816-9536835 | None:intergenic | 45.0% | |
| CCTGTCCAACTTTACAGGTT+TGG | + | chr4.1:9536909-9536928 | MS.gene70325:intron | 45.0% | |
| CTGCTTCATCGTGTAGAAGA+GGG | - | chr4.1:9538180-9538199 | None:intergenic | 45.0% | |
| CTGTTGTGCGGCCTATTAAT+TGG | + | chr4.1:9537958-9537977 | MS.gene70325:CDS | 45.0% | |
| GAATGTCCGTCCCACATTTA+CGG | + | chr4.1:9536645-9536664 | MS.gene70325:intron | 45.0% | |
| GCCTGCATGTGAATTACAAC+TGG | - | chr4.1:9538518-9538537 | None:intergenic | 45.0% | |
| GCTTCAACATTGGAATCTGG+AGG | + | chr4.1:9535008-9535027 | MS.gene70325:intron | 45.0% | |
| GTCAACACCTGAACACACTT+TGG | - | chr4.1:9534345-9534364 | None:intergenic | 45.0% | |
| GTTGATGTCTCGTGATTACC+CGG | + | chr4.1:9535312-9535331 | MS.gene70325:intron | 45.0% | |
| GTTGTGTGTGATTAGTGACC+AGG | + | chr4.1:9537303-9537322 | MS.gene70325:intron | 45.0% | |
| TATAAGCTGCTCCAAGGAGA+CGG | + | chr4.1:9536264-9536283 | MS.gene70325:intron | 45.0% | |
| TATATTCTCAGGTGCCAAGC+TGG | - | chr4.1:9534733-9534752 | None:intergenic | 45.0% | |
| TCAGAACCAACTCTTCCTCA+AGG | - | chr4.1:9535046-9535065 | None:intergenic | 45.0% | |
| TCGGTGCAAGAAGGTTTCTA+CGG | + | chr4.1:9533910-9533929 | MS.gene70325:CDS | 45.0% | |
| TGACTGTGTGACAGAACCAT+AGG | - | chr4.1:9537849-9537868 | None:intergenic | 45.0% | |
| TGTGACATGGGTGAACAAAC+AGG | - | chr4.1:9536872-9536891 | None:intergenic | 45.0% | |
| TTCTCACACAATTCTCGGGT+CGG | - | chr4.1:9533838-9533857 | None:intergenic | 45.0% | |
| TTGACACTTAGCAGTGTCAC+AGG | + | chr4.1:9536520-9536539 | MS.gene70325:intron | 45.0% | |
| TTGTTCACCCATGTCACAGA+TGG | + | chr4.1:9536874-9536893 | MS.gene70325:intron | 45.0% | |
| ! | AGATGTACCAGTGGAAGCAT+TGG | + | chr4.1:9538120-9538139 | MS.gene70325:CDS | 45.0% |
| ! | AGTTCCTTTTACCGAGTCAG+TGG | + | chr4.1:9536623-9536642 | MS.gene70325:intron | 45.0% |
| ! | ATCTTTTAGCAGGGAGTCCA+TGG | - | chr4.1:9537336-9537355 | None:intergenic | 45.0% |
| ! | CTTGTCATTTCTACAGGTGG+AGG | + | chr4.1:9537933-9537952 | MS.gene70325:CDS | 45.0% |
| ! | GGGCGCTGTATATATGTTGT+TGG | + | chr4.1:9535277-9535296 | MS.gene70325:CDS | 45.0% |
| ! | TCTTTTAGCAGGGGAGTTCA+TGG | + | chr4.1:9537571-9537590 | MS.gene70325:intron | 45.0% |
| !! | CATTCCACTGACTCGGTAAA+AGG | - | chr4.1:9536630-9536649 | None:intergenic | 45.0% |
| !! | CCTCTTACCAGCTTGTTACT+AGG | + | chr4.1:9536813-9536832 | MS.gene70325:intron | 45.0% |
| !! | TCAGAAGTGTGTCGGTGTTA+CGG | - | chr4.1:9534321-9534340 | None:intergenic | 45.0% |
| !! | TGAGGAAGAGTTGGTTCTGA+AGG | + | chr4.1:9535046-9535065 | MS.gene70325:CDS | 45.0% |
| !! | TGTGTTCAGGTGTTGACATG+TGG | + | chr4.1:9534348-9534367 | MS.gene70325:intron | 45.0% |
| !! | TTGTATGGGAATGGATTGCC+AGG | + | chr4.1:9538065-9538084 | MS.gene70325:intron | 45.0% |
| !! | AAAAAATAATTTCTAAATTT+GGG | - | chr4.1:9538316-9538335 | None:intergenic | 5.0% |
| !! | TAAAAAATAATTTCTAAATT+TGG | - | chr4.1:9538317-9538336 | None:intergenic | 5.0% |
| !! | TAATTGAAAAAAAAAAAAAA+AGG | + | chr4.1:9534843-9534862 | MS.gene70325:intron | 5.0% |
| AAATGTTAACGAGTGCCCCC+GGG | - | chr4.1:9538423-9538442 | None:intergenic | 50.0% | |
| ACCTGTAAAGTTGGACAGGG+CGG | - | chr4.1:9536908-9536927 | None:intergenic | 50.0% | |
| ACTCGCTCCTAGTAACAAGC+TGG | - | chr4.1:9536823-9536842 | None:intergenic | 50.0% | |
| AGCAGGAGATGCATACACTG+CGG | + | chr4.1:9538195-9538214 | MS.gene70325:CDS | 50.0% | |
| AGGGCATAAGTTTCCCCTTG+AGG | + | chr4.1:9535028-9535047 | MS.gene70325:CDS | 50.0% | |
| AGGGCGAGAATTAGTTCCCA+CGG | - | chr4.1:9538161-9538180 | None:intergenic | 50.0% | |
| ATAAGCTGCTCCAAGGAGAC+GGG | + | chr4.1:9536265-9536284 | MS.gene70325:intron | 50.0% | |
| CCACTGTCCATCTGTGACAT+GGG | - | chr4.1:9536884-9536903 | None:intergenic | 50.0% | |
| CCCTAATAGTCACACCAGCT+TGG | + | chr4.1:9534716-9534735 | MS.gene70325:intron | 50.0% | |
| CCTCTTCTACACGATGAAGC+AGG | + | chr4.1:9538178-9538197 | MS.gene70325:CDS | 50.0% | |
| CCTGCTTCATCGTGTAGAAG+AGG | - | chr4.1:9538181-9538200 | None:intergenic | 50.0% | |
| GAAATGTTAACGAGTGCCCC+CGG | - | chr4.1:9538424-9538443 | None:intergenic | 50.0% | |
| GAGAAGGAGGTCAGTTGGAA+AGG | + | chr4.1:9536123-9536142 | MS.gene70325:intron | 50.0% | |
| GCCAAAAGAATTGCAGCCGT+GGG | + | chr4.1:9538142-9538161 | MS.gene70325:CDS | 50.0% | |
| GCCAAGCTGGTGTGACTATT+AGG | - | chr4.1:9534720-9534739 | None:intergenic | 50.0% | |
| GGTTGTTCTTTGAGTCGGAC+CGG | + | chr4.1:9533863-9533882 | MS.gene70325:CDS | 50.0% | |
| GTAGAGACAGCAAATGGGCA+TGG | + | chr4.1:9536737-9536756 | MS.gene70325:intron | 50.0% | |
| GTTTCCCCTTGAGGAAGAGT+TGG | + | chr4.1:9535037-9535056 | MS.gene70325:CDS | 50.0% | |
| TAGATAAAAACGGGGGGAGG+GGG | + | chr4.1:9535815-9535834 | MS.gene70325:intron | 50.0% | |
| TCCACTGTCCATCTGTGACA+TGG | - | chr4.1:9536885-9536904 | None:intergenic | 50.0% | |
| TCTCACACAATTCTCGGGTC+GGG | - | chr4.1:9533837-9533856 | None:intergenic | 50.0% | |
| TGACAGAACCATAGGCTAGC+CGG | - | chr4.1:9537841-9537860 | None:intergenic | 50.0% | |
| TTGCAGGCGCTAGAGCAAAT+TGG | + | chr4.1:9539170-9539189 | MS.gene70325:intron | 50.0% | |
| ! | CTTTTGGCCAATGCTTCCAC+TGG | - | chr4.1:9538130-9538149 | None:intergenic | 50.0% |
| ! | GCACTGACACTTCACATCGA+AGG | - | chr4.1:9536415-9536434 | None:intergenic | 50.0% |
| ! | TCCCACGGCTGCAATTCTTT+TGG | - | chr4.1:9538146-9538165 | None:intergenic | 50.0% |
| ! | TGCACAAGGGGGTTAGTGTT+TGG | + | chr4.1:9538095-9538114 | MS.gene70325:CDS | 50.0% |
| !! | AAGGTGCTTAAAGAGTGCCC+CGG | + | chr4.1:9538402-9538421 | MS.gene70325:intron | 50.0% |
| !! | ATGCAGGAATGATGGGCTCT+GGG | + | chr4.1:9535386-9535405 | MS.gene70325:intron | 50.0% |
| !! | CAGAAGTGTGTCGGTGTTAC+GGG | - | chr4.1:9534320-9534339 | None:intergenic | 50.0% |
| !! | GAATTGTTCCGGCTAGCCTA+TGG | + | chr4.1:9537830-9537849 | MS.gene70325:intron | 50.0% |
| !! | TCAGACGATTCGGTGCAAGA+AGG | + | chr4.1:9533901-9533920 | MS.gene70325:CDS | 50.0% |
| !! | TGAGACTCTAGCATTGGCGT+TGG | - | chr4.1:9538588-9538607 | None:intergenic | 50.0% |
| AACAAGCTGGTAAGAGGGGG+TGG | - | chr4.1:9536810-9536829 | None:intergenic | 55.0% | |
| AATGTTAACGAGTGCCCCCG+GGG | - | chr4.1:9538422-9538441 | None:intergenic | 55.0% | |
| ACCGCCCTGTCCAACTTTAC+AGG | + | chr4.1:9536904-9536923 | MS.gene70325:intron | 55.0% | |
| CACTTAGCAGTGTCACAGGC+AGG | + | chr4.1:9536524-9536543 | MS.gene70325:intron | 55.0% | |
| CCCATGTCACAGATGGACAG+TGG | + | chr4.1:9536881-9536900 | MS.gene70325:intron | 55.0% | |
| GCTGTATCGCTACAGCGTAG+CGG | + | chr4.1:9537209-9537228 | MS.gene70325:intron | 55.0% | |
| GGCCAAAAGAATTGCAGCCG+TGG | + | chr4.1:9538141-9538160 | MS.gene70325:CDS | 55.0% | |
| TAGCAGGGAGTCCATGGCAT+AGG | - | chr4.1:9537330-9537349 | None:intergenic | 55.0% | |
| TCTTGTTAACGAGTGCCCCC+GGG | + | chr4.1:9538275-9538294 | MS.gene70325:intron | 55.0% | |
| TTCGCGAGAAGGAGGTCAGT+TGG | + | chr4.1:9536118-9536137 | MS.gene70325:intron | 55.0% | |
| TTCTCGGGTCGGGTAAGAAC+CGG | - | chr4.1:9533827-9533846 | None:intergenic | 55.0% | |
| ! | GGACGGACATTCCACTGACT+CGG | - | chr4.1:9536637-9536656 | None:intergenic | 55.0% |
| ! | GTCTTGTTAACGAGTGCCCC+CGG | + | chr4.1:9538274-9538293 | MS.gene70325:intron | 55.0% |
| !! | AAGCACTGACACGTCGACAC+CGG | + | chr4.1:9536299-9536318 | MS.gene70325:intron | 55.0% |
| !! | AGGTGCTTAAAGAGTGCCCC+GGG | + | chr4.1:9538403-9538422 | MS.gene70325:intron | 55.0% |
| !! | ATGCTTAAAGAGTGCCCCGG+GGG | - | chr4.1:9538293-9538312 | None:intergenic | 55.0% |
| !! | CATGCAGGAATGATGGGCTC+TGG | + | chr4.1:9535385-9535404 | MS.gene70325:intron | 55.0% |
| !! | GATGCTTAAAGAGTGCCCCG+GGG | - | chr4.1:9538294-9538313 | None:intergenic | 55.0% |
| !! | GCTCTGGGAAGACAACTGTG+GGG | + | chr4.1:9535401-9535420 | MS.gene70325:CDS | 55.0% |
| !! | GGATGCTTAAAGAGTGCCCC+GGG | - | chr4.1:9538295-9538314 | None:intergenic | 55.0% |
| !! | GGCTCTGGGAAGACAACTGT+GGG | + | chr4.1:9535400-9535419 | MS.gene70325:CDS | 55.0% |
| !! | GGGATGCTTAAAGAGTGCCC+CGG | - | chr4.1:9538296-9538315 | None:intergenic | 55.0% |
| AGTGACCAGGGCCTATGCCA+TGG | + | chr4.1:9537316-9537335 | MS.gene70325:intron | 60.0% | |
| CTTGTTAACGAGTGCCCCCG+GGG | + | chr4.1:9538276-9538295 | MS.gene70325:intron | 60.0% | |
| GGAGGGGGTCAGTTATCCTG+GGG | + | chr4.1:9535830-9535849 | MS.gene70325:intron | 60.0% | |
| GGGAGGGGGTCAGTTATCCT+GGG | + | chr4.1:9535829-9535848 | MS.gene70325:intron | 60.0% | |
| !! | CAGGTGGAGGTGCTGTTGTG+CGG | + | chr4.1:9537946-9537965 | MS.gene70325:CDS | 60.0% |
| !! | GGGCTCTGGGAAGACAACTG+TGG | + | chr4.1:9535399-9535418 | MS.gene70325:CDS | 60.0% |
| !! | GGTGCTTAAAGAGTGCCCCG+GGG | + | chr4.1:9538404-9538423 | MS.gene70325:intron | 60.0% |
| !! | GTGCTTAAAGAGTGCCCCGG+GGG | + | chr4.1:9538405-9538424 | MS.gene70325:intron | 60.0% |
| GGAGTCCATGGCATAGGCCC+TGG | - | chr4.1:9537324-9537343 | None:intergenic | 65.0% | |
| GGGGAGGGGGTCAGTTATCC+TGG | + | chr4.1:9535828-9535847 | MS.gene70325:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 9533791 | 9539232 | 9533791 | ID=MS.gene70325 |
| chr4.1 | mRNA | 9533791 | 9539232 | 9533791 | ID=MS.gene70325.t1;Parent=MS.gene70325 |
| chr4.1 | exon | 9533791 | 9533962 | 9533791 | ID=MS.gene70325.t1.exon1;Parent=MS.gene70325.t1 |
| chr4.1 | CDS | 9533791 | 9533962 | 9533791 | ID=cds.MS.gene70325.t1;Parent=MS.gene70325.t1 |
| chr4.1 | exon | 9535009 | 9535067 | 9535009 | ID=MS.gene70325.t1.exon2;Parent=MS.gene70325.t1 |
| chr4.1 | CDS | 9535009 | 9535067 | 9535009 | ID=cds.MS.gene70325.t1;Parent=MS.gene70325.t1 |
| chr4.1 | exon | 9535244 | 9535298 | 9535244 | ID=MS.gene70325.t1.exon3;Parent=MS.gene70325.t1 |
| chr4.1 | CDS | 9535244 | 9535298 | 9535244 | ID=cds.MS.gene70325.t1;Parent=MS.gene70325.t1 |
| chr4.1 | exon | 9535392 | 9535464 | 9535392 | ID=MS.gene70325.t1.exon4;Parent=MS.gene70325.t1 |
| chr4.1 | CDS | 9535392 | 9535464 | 9535392 | ID=cds.MS.gene70325.t1;Parent=MS.gene70325.t1 |
| chr4.1 | exon | 9536044 | 9536131 | 9536044 | ID=MS.gene70325.t1.exon5;Parent=MS.gene70325.t1 |
| chr4.1 | CDS | 9536044 | 9536131 | 9536044 | ID=cds.MS.gene70325.t1;Parent=MS.gene70325.t1 |
| chr4.1 | exon | 9537897 | 9537979 | 9537897 | ID=MS.gene70325.t1.exon6;Parent=MS.gene70325.t1 |
| chr4.1 | CDS | 9537897 | 9537979 | 9537897 | ID=cds.MS.gene70325.t1;Parent=MS.gene70325.t1 |
| chr4.1 | exon | 9538087 | 9538216 | 9538087 | ID=MS.gene70325.t1.exon7;Parent=MS.gene70325.t1 |
| chr4.1 | CDS | 9538087 | 9538216 | 9538087 | ID=cds.MS.gene70325.t1;Parent=MS.gene70325.t1 |
| chr4.1 | exon | 9538536 | 9538614 | 9538536 | ID=MS.gene70325.t1.exon8;Parent=MS.gene70325.t1 |
| chr4.1 | CDS | 9538536 | 9538614 | 9538536 | ID=cds.MS.gene70325.t1;Parent=MS.gene70325.t1 |
| chr4.1 | exon | 9538969 | 9539033 | 9538969 | ID=MS.gene70325.t1.exon9;Parent=MS.gene70325.t1 |
| chr4.1 | CDS | 9538969 | 9539033 | 9538969 | ID=cds.MS.gene70325.t1;Parent=MS.gene70325.t1 |
| chr4.1 | exon | 9539176 | 9539232 | 9539176 | ID=MS.gene70325.t1.exon10;Parent=MS.gene70325.t1 |
| chr4.1 | CDS | 9539176 | 9539232 | 9539176 | ID=cds.MS.gene70325.t1;Parent=MS.gene70325.t1 |
| Gene Sequence |
| Protein sequence |
