Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72558.t1 | XP_013455414.1 | 99.3 | 441 | 3 | 0 | 1 | 441 | 1 | 441 | 6.40E-243 | 849.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72558.t1 | Q9FGN3 | 52.4 | 439 | 202 | 3 | 23 | 460 | 13 | 445 | 6.7e-124 | 445.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72558.t1 | A0A072UUB0 | 99.3 | 441 | 3 | 0 | 1 | 441 | 1 | 441 | 4.6e-243 | 849.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene72558 | 0.804688 | 1.92E-49 | -1.69E-46 |
| MS.gene049153 | MS.gene72558 | 0.800602 | 1.33E-48 | -1.69E-46 |
| MS.gene050226 | MS.gene72558 | 0.81491 | 1.21E-51 | -1.69E-46 |
| MS.gene050227 | MS.gene72558 | 0.809934 | 1.48E-50 | -1.69E-46 |
| MS.gene050228 | MS.gene72558 | 0.806486 | 8.04E-50 | -1.69E-46 |
| MS.gene050438 | MS.gene72558 | 0.814537 | 1.46E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene72558 | 0.808911 | 2.45E-50 | -1.69E-46 |
| MS.gene050623 | MS.gene72558 | -0.807131 | 5.87E-50 | -1.69E-46 |
| MS.gene050719 | MS.gene72558 | 0.802386 | 5.75E-49 | -1.69E-46 |
| MS.gene050724 | MS.gene72558 | 0.818658 | 1.75E-52 | -1.69E-46 |
| MS.gene050787 | MS.gene72558 | 0.822858 | 1.89E-53 | -1.69E-46 |
| MS.gene050959 | MS.gene72558 | 0.803064 | 4.17E-49 | -1.69E-46 |
| MS.gene051265 | MS.gene72558 | 0.805082 | 1.58E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene72558 | 0.838044 | 3.63E-57 | -1.69E-46 |
| MS.gene052020 | MS.gene72558 | 0.826427 | 2.73E-54 | -1.69E-46 |
| MS.gene052665 | MS.gene72558 | 0.802265 | 6.09E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene72558 | 0.812382 | 4.36E-51 | -1.69E-46 |
| MS.gene053221 | MS.gene72558 | 0.800219 | 1.60E-48 | -1.69E-46 |
| MS.gene053836 | MS.gene72558 | 0.816983 | 4.17E-52 | -1.69E-46 |
| MS.gene054379 | MS.gene72558 | 0.803264 | 3.79E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene72558 | 0.809268 | 2.06E-50 | -1.69E-46 |
| MS.gene054473 | MS.gene72558 | 0.806077 | 9.80E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene72558 | 0.800501 | 1.40E-48 | -1.69E-46 |
| MS.gene055356 | MS.gene72558 | 0.808572 | 2.90E-50 | -1.69E-46 |
| MS.gene055358 | MS.gene72558 | 0.829611 | 4.67E-55 | -1.69E-46 |
| MS.gene057469 | MS.gene72558 | 0.819492 | 1.13E-52 | -1.69E-46 |
| MS.gene057750 | MS.gene72558 | 0.817048 | 4.04E-52 | -1.69E-46 |
| MS.gene058168 | MS.gene72558 | 0.810422 | 1.16E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene72558 | 0.806489 | 8.02E-50 | -1.69E-46 |
| MS.gene060404 | MS.gene72558 | 0.801579 | 8.43E-49 | -1.69E-46 |
| MS.gene060683 | MS.gene72558 | 0.801669 | 8.07E-49 | -1.69E-46 |
| MS.gene060802 | MS.gene72558 | 0.825416 | 4.74E-54 | -1.69E-46 |
| MS.gene060803 | MS.gene72558 | 0.81992 | 9.01E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72558.t1 | MTR_4g036815 | 99.320 | 441 | 3 | 0 | 1 | 441 | 1 | 441 | 0.0 | 895 |
| MS.gene72558.t1 | MTR_3g408430 | 62.642 | 439 | 138 | 9 | 10 | 441 | 7 | 426 | 0.0 | 530 |
| MS.gene72558.t1 | MTR_2g021030 | 31.746 | 378 | 231 | 17 | 82 | 440 | 11 | 380 | 3.26e-23 | 102 |
| MS.gene72558.t1 | MTR_2g021030 | 28.774 | 212 | 111 | 9 | 189 | 392 | 256 | 435 | 9.10e-11 | 64.3 |
| MS.gene72558.t1 | MTR_2g021030 | 31.746 | 378 | 231 | 17 | 82 | 440 | 11 | 380 | 9.95e-23 | 101 |
| MS.gene72558.t1 | MTR_2g021030 | 27.848 | 237 | 130 | 10 | 189 | 416 | 256 | 460 | 1.53e-11 | 67.0 |
| MS.gene72558.t1 | MTR_1g114610 | 26.276 | 392 | 247 | 18 | 82 | 451 | 20 | 391 | 7.25e-13 | 70.5 |
| MS.gene72558.t1 | MTR_4g013255 | 27.753 | 227 | 152 | 6 | 216 | 437 | 324 | 543 | 1.30e-12 | 70.5 |
| MS.gene72558.t1 | MTR_1g018790 | 24.331 | 411 | 235 | 15 | 82 | 430 | 64 | 460 | 9.48e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72558.t1 | AT5G07670 | 57.562 | 443 | 166 | 6 | 1 | 441 | 1 | 423 | 2.24e-166 | 478 |
| MS.gene72558.t1 | AT5G51380 | 53.348 | 448 | 202 | 3 | 14 | 460 | 4 | 445 | 2.04e-155 | 450 |
| MS.gene72558.t1 | AT5G51370 | 56.604 | 371 | 160 | 1 | 90 | 460 | 40 | 409 | 4.89e-135 | 397 |
| MS.gene72558.t1 | AT5G51370 | 57.729 | 317 | 133 | 1 | 90 | 406 | 40 | 355 | 8.70e-118 | 350 |
| MS.gene72558.t1 | AT4G15475 | 27.318 | 399 | 251 | 12 | 82 | 455 | 11 | 395 | 1.85e-21 | 97.8 |
| MS.gene72558.t1 | AT4G15475 | 25.526 | 333 | 206 | 12 | 132 | 455 | 199 | 498 | 4.05e-14 | 75.1 |
| MS.gene72558.t1 | AT5G23340 | 25.758 | 396 | 231 | 16 | 82 | 445 | 10 | 374 | 1.15e-14 | 76.3 |
| MS.gene72558.t1 | AT2G25490 | 25.362 | 276 | 172 | 9 | 189 | 430 | 216 | 491 | 1.24e-12 | 70.5 |
Find 100 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTTCTTCAATGGCGAATT+AGG | 0.133712 | 4.1:+62150722 | None:intergenic |
| TCCGGGACTTGATGAGTATT+TGG | 0.154013 | 4.1:-62149751 | MS.gene72558:CDS |
| TTGAATATGTATATTGATTC+TGG | 0.183844 | 4.1:-62150290 | MS.gene72558:CDS |
| GGTTCGGTTGTTTCGGATAT+TGG | 0.212698 | 4.1:-62149996 | MS.gene72558:CDS |
| TATCTGGTAGATTGATTTAT+AGG | 0.219707 | 4.1:-62150397 | MS.gene72558:CDS |
| ACTTGAACCCTTCTCAAATT+AGG | 0.239059 | 4.1:+62150179 | None:intergenic |
| TGCTAGGGAGATTATTATTC+AGG | 0.242284 | 4.1:-62149637 | MS.gene72558:CDS |
| CCTGTTGAGGTTATTGATAA+TGG | 0.245467 | 4.1:-62150227 | MS.gene72558:CDS |
| GAACACGGTGGTCTGATTTA+TGG | 0.249895 | 4.1:-62150697 | MS.gene72558:CDS |
| GTAAAATTGCTTTACTTAGA+AGG | 0.276039 | 4.1:-62148834 | MS.gene72558:CDS |
| GCAACAACGATTTGGTTTAA+AGG | 0.278209 | 4.1:+62150653 | None:intergenic |
| TTCACATTTCTCTGTGAATC+TGG | 0.289076 | 4.1:+62150500 | None:intergenic |
| AATCATGTTGATTTGATTCA+TGG | 0.312777 | 4.1:-62150362 | MS.gene72558:CDS |
| GGCGAATTAGGGTTAGGGTT+AGG | 0.312829 | 4.1:+62150734 | None:intergenic |
| TTTGATGGGATTAAGGCTAT+TGG | 0.316937 | 4.1:-62149906 | MS.gene72558:CDS |
| GCGAATTAGGGTTAGGGTTA+GGG | 0.322778 | 4.1:+62150735 | None:intergenic |
| CTGTTGAGGTTATTGATAAT+GGG | 0.336909 | 4.1:-62150226 | MS.gene72558:CDS |
| TCGGCTTTGCAACTGTTTGC+AGG | 0.351431 | 4.1:-62149587 | MS.gene72558:intron |
| CCGGGACTTGATGAGTATTT+GGG | 0.353254 | 4.1:-62149750 | MS.gene72558:CDS |
| GTGTTCTACATTGCAGGAAT+TGG | 0.354359 | 4.1:-62150114 | MS.gene72558:CDS |
| GTTTCTTCAATGGCGAATTA+GGG | 0.356220 | 4.1:+62150723 | None:intergenic |
| TGAAATGGGTTTGTTAAGTT+TGG | 0.356585 | 4.1:-62150144 | MS.gene72558:CDS |
| GGGTTAGTTGCTTTAGCTAA+TGG | 0.358130 | 4.1:-62150206 | MS.gene72558:CDS |
| GATCGATTCGGATTCGTGAT+TGG | 0.364905 | 4.1:-62150430 | MS.gene72558:CDS |
| TTGCAGCAGCAACAACGATT+TGG | 0.372725 | 4.1:+62150645 | None:intergenic |
| AGATTATTATTCAGGATTGC+TGG | 0.374839 | 4.1:-62149629 | MS.gene72558:CDS |
| GATTGCTGGGGATTTGATAA+TGG | 0.380312 | 4.1:-62149615 | MS.gene72558:CDS |
| TTGTGAAGCTTGAGCTTTGT+GGG | 0.380521 | 4.1:-62149941 | MS.gene72558:CDS |
| TAAGAAGATTGATTTGAATC+CGG | 0.381569 | 4.1:-62149769 | MS.gene72558:CDS |
| ACAGAGAAATGTGAATTCAT+TGG | 0.382696 | 4.1:-62150492 | MS.gene72558:CDS |
| TTCAATGGCGAATTAGGGTT+AGG | 0.387616 | 4.1:+62150728 | None:intergenic |
| ATTCTGGGTCGACGCCGAAT+TGG | 0.388133 | 4.1:-62150274 | MS.gene72558:CDS |
| TTGAGAAGGGTTCAAGTGAT+TGG | 0.391585 | 4.1:-62150173 | MS.gene72558:CDS |
| TTGATGGGATTAAGGCTATT+GGG | 0.396993 | 4.1:-62149905 | MS.gene72558:CDS |
| TTTCTGTTTGCAGGGTTGCT+AGG | 0.398905 | 4.1:-62149653 | MS.gene72558:CDS |
| GTGTAGTGATAATGTGTTAA+GGG | 0.403587 | 4.1:-62150081 | MS.gene72558:CDS |
| TGAAGAGTGTTCTACATTGC+AGG | 0.404045 | 4.1:-62150120 | MS.gene72558:CDS |
| TTGGTTTAAAGGCTTTGATT+TGG | 0.408136 | 4.1:+62150664 | None:intergenic |
| TTTGCAAAAGTGTCAGTTGC+GGG | 0.408350 | 4.1:-62149700 | MS.gene72558:CDS |
| ATTGCTAACAACAGAAGGTT+TGG | 0.408544 | 4.1:-62148805 | MS.gene72558:CDS |
| TGAATATGTATATTGATTCT+GGG | 0.409312 | 4.1:-62150289 | MS.gene72558:CDS |
| TTCTGTTTGCAGGGTTGCTA+GGG | 0.414617 | 4.1:-62149652 | MS.gene72558:CDS |
| GGATTTGATAATGGCATGTT+CGG | 0.419974 | 4.1:-62149606 | MS.gene72558:CDS |
| GTTGAATTTACAAGGTCGTT+TGG | 0.420107 | 4.1:-62150456 | MS.gene72558:CDS |
| CTTGTGAAGCTTGAGCTTTG+TGG | 0.422001 | 4.1:-62149942 | MS.gene72558:CDS |
| CGTGTTCCTAGTTTCTTCAA+TGG | 0.432750 | 4.1:+62150713 | None:intergenic |
| TCCTCACAATTAAACCAATT+CGG | 0.433785 | 4.1:+62150260 | None:intergenic |
| GAATTTCATCAGATAACAAA+AGG | 0.435440 | 4.1:+62150546 | None:intergenic |
| AGTGATTGGTGCTAGTGAAA+TGG | 0.438381 | 4.1:-62150159 | MS.gene72558:CDS |
| GTCGTTTGGTTCGATCGATT+CGG | 0.438610 | 4.1:-62150442 | MS.gene72558:CDS |
| TATCCTTGCTCCAGTTGGTA+TGG | 0.447331 | 4.1:-62147467 | MS.gene72558:intron |
| AGTGTAGTGATAATGTGTTA+AGG | 0.449338 | 4.1:-62150082 | MS.gene72558:CDS |
| CCATTATCAATAACCTCAAC+AGG | 0.455104 | 4.1:+62150227 | None:intergenic |
| AAGAAGATTGATTTGAATCC+GGG | 0.456191 | 4.1:-62149768 | MS.gene72558:CDS |
| TGGAGTCTGTAATACATTCA+TGG | 0.461431 | 4.1:-62148785 | MS.gene72558:CDS |
| GATTATTATTCAGGATTGCT+GGG | 0.464395 | 4.1:-62149628 | MS.gene72558:CDS |
| AAATCAACATGATTAAGATT+AGG | 0.469235 | 4.1:+62150371 | None:intergenic |
| GTGATTGGTGCTAGTGAAAT+GGG | 0.480614 | 4.1:-62150158 | MS.gene72558:CDS |
| GCTTACATGAGACTACTCTA+AGG | 0.483154 | 4.1:+62148748 | None:intergenic |
| ATCATGTTGATTTGATTCAT+GGG | 0.489312 | 4.1:-62150361 | MS.gene72558:CDS |
| TCAATGGCGAATTAGGGTTA+GGG | 0.492554 | 4.1:+62150729 | None:intergenic |
| ATTCATTGGTTTGTAAAAGA+TGG | 0.495844 | 4.1:-62150478 | MS.gene72558:CDS |
| TCTCTGTGAATCTGGAAGCT+TGG | 0.498971 | 4.1:+62150508 | None:intergenic |
| AGTTGACATTGTGTGATCAT+AGG | 0.504164 | 4.1:-62149860 | MS.gene72558:CDS |
| AAAAGATGGTTGAATTTACA+AGG | 0.506141 | 4.1:-62150464 | MS.gene72558:CDS |
| GGAGAATATGCTTCCTGTTG+AGG | 0.516115 | 4.1:-62150240 | MS.gene72558:CDS |
| AAATTGGTTGGGAATGTTGA+GGG | 0.518791 | 4.1:-62150026 | MS.gene72558:CDS |
| GCCGAATTGGTTTAATTGTG+AGG | 0.522553 | 4.1:-62150261 | MS.gene72558:CDS |
| CTTGAGCTTTGTGGGTGTGA+AGG | 0.531367 | 4.1:-62149933 | MS.gene72558:CDS |
| CCCAAATACTCATCAAGTCC+CGG | 0.535072 | 4.1:+62149750 | None:intergenic |
| ATGGTTGTCCTAATTTGAGA+AGG | 0.537606 | 4.1:-62150187 | MS.gene72558:CDS |
| ATCATAGGATGGATGATGGA+TGG | 0.540837 | 4.1:-62149845 | MS.gene72558:CDS |
| TGGGAAGTGTTGTCAGATGT+TGG | 0.541636 | 4.1:-62149886 | MS.gene72558:CDS |
| TGTAGTGATAATGTGTTAAG+GGG | 0.549508 | 4.1:-62150080 | MS.gene72558:CDS |
| TTGAGCTTTGTGGGTGTGAA+GGG | 0.551393 | 4.1:-62149932 | MS.gene72558:CDS |
| TGCTCATTGCTAACAACAGA+AGG | 0.553995 | 4.1:-62148810 | MS.gene72558:CDS |
| AAATGCAGCCTCTCAAGTGC+AGG | 0.555404 | 4.1:+62149720 | None:intergenic |
| GTTCTTGTCCTGCACTTGAG+AGG | 0.559400 | 4.1:-62149728 | MS.gene72558:CDS |
| TGGTTGTCCTAATTTGAGAA+GGG | 0.574459 | 4.1:-62150186 | MS.gene72558:CDS |
| TCGCAATGGTGGTAGAGCTA+TGG | 0.576574 | 4.1:+62147402 | None:intergenic |
| GATTGTTCATTTCGCAATGG+TGG | 0.578252 | 4.1:+62147391 | None:intergenic |
| TGTGATCATAGGATGGATGA+TGG | 0.581367 | 4.1:-62149849 | MS.gene72558:CDS |
| GTGAGAATTTGAAGACGTTG+AGG | 0.581735 | 4.1:-62149803 | MS.gene72558:CDS |
| AATTCGCCATTGAAGAAACT+AGG | 0.585056 | 4.1:-62150719 | MS.gene72558:CDS |
| AATTTCATCAGATAACAAAA+GGG | 0.589426 | 4.1:+62150547 | None:intergenic |
| GTCTGTAATACATTCATGGA+AGG | 0.593439 | 4.1:-62148781 | MS.gene72558:CDS |
| GGATGATGGATGGATGGCTG+CGG | 0.600102 | 4.1:-62149835 | MS.gene72558:CDS |
| TCAGATTGTTCATTTCGCAA+TGG | 0.600330 | 4.1:+62147388 | None:intergenic |
| GAAATTGGTTGGGAATGTTG+AGG | 0.606598 | 4.1:-62150027 | MS.gene72558:CDS |
| TAGGATGGATGATGGATGGA+TGG | 0.622771 | 4.1:-62149841 | MS.gene72558:CDS |
| AAATTAGGGTTTGATTTGCG+AGG | 0.625332 | 4.1:+62150596 | None:intergenic |
| ATTTGCAAAAGTGTCAGTTG+CGG | 0.627786 | 4.1:-62149701 | MS.gene72558:CDS |
| GACATTGTGTGATCATAGGA+TGG | 0.643629 | 4.1:-62149856 | MS.gene72558:CDS |
| ATTATTATTCAGGATTGCTG+GGG | 0.650156 | 4.1:-62149627 | MS.gene72558:CDS |
| GTAGTGATAATGTGTTAAGG+GGG | 0.652549 | 4.1:-62150079 | MS.gene72558:CDS |
| CATTGAAGAAACTAGGAACA+CGG | 0.661833 | 4.1:-62150712 | MS.gene72558:CDS |
| GCGGGATAAGAAGAGTGTGT+CGG | 0.662114 | 4.1:-62149682 | MS.gene72558:CDS |
| GAAGTGTTGTCAGATGTTGG+AGG | 0.680445 | 4.1:-62149883 | MS.gene72558:CDS |
| CAAACTCAATGACTGCACTG+AGG | 0.753963 | 4.1:+62147443 | None:intergenic |
| TGAAGAAACTAGGAACACGG+TGG | 0.807458 | 4.1:-62150709 | MS.gene72558:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAAATAAAAATAATGCT+AGG | - | chr4.1:62150593-62150612 | MS.gene72558:CDS | 15.0% |
| !! | GATTGTTTATTGTAAAATTT+GGG | - | chr4.1:62150524-62150543 | MS.gene72558:CDS | 15.0% |
| !! | TAAAAAAGTGATTATTACAT+TGG | + | chr4.1:62149861-62149880 | None:intergenic | 15.0% |
| !! | TGATTGTTTATTGTAAAATT+TGG | - | chr4.1:62150523-62150542 | MS.gene72558:CDS | 15.0% |
| !!! | ATACTTTTGTATAAAATGTA+TGG | - | chr4.1:62150111-62150130 | MS.gene72558:CDS | 15.0% |
| !!! | TTCAAGATAATTTTACTATT+TGG | - | chr4.1:62150235-62150254 | MS.gene72558:CDS | 15.0% |
| !! | AAATCAACATGATTAAGATT+AGG | + | chr4.1:62147786-62147805 | None:intergenic | 20.0% |
| !! | AATTTCATCAGATAACAAAA+GGG | + | chr4.1:62147610-62147629 | None:intergenic | 20.0% |
| !! | GAAAAATTCTATTGTGTAAT+TGG | - | chr4.1:62148898-62148917 | MS.gene72558:intron | 20.0% |
| !! | TGATCAATGATTGAAAAATT+GGG | + | chr4.1:62147585-62147604 | None:intergenic | 20.0% |
| !! | TTGATCAATGATTGAAAAAT+TGG | + | chr4.1:62147586-62147605 | None:intergenic | 20.0% |
| !! | TTGTTTAAAGACTATTGTAT+AGG | + | chr4.1:62150579-62150598 | None:intergenic | 20.0% |
| !!! | AATAAACAATCATTTGAGTT+CGG | + | chr4.1:62150515-62150534 | None:intergenic | 20.0% |
| !!! | AGTAATTTTTTCTTTCAGTA+TGG | - | chr4.1:62148990-62149009 | MS.gene72558:intron | 20.0% |
| !!! | ATAAATTTTGCATGTAATGT+TGG | - | chr4.1:62150306-62150325 | MS.gene72558:CDS | 20.0% |
| !!! | TGAATATGTATATTGATTCT+GGG | - | chr4.1:62147865-62147884 | MS.gene72558:intron | 20.0% |
| !!! | TTGAATATGTATATTGATTC+TGG | - | chr4.1:62147864-62147883 | MS.gene72558:intron | 20.0% |
| !!! | TTTTACATAATTACATTGCT+AGG | + | chr4.1:62149958-62149977 | None:intergenic | 20.0% |
| !!! | TTTTACTAAATAGCGTATTA+CGG | - | chr4.1:62149694-62149713 | MS.gene72558:CDS | 20.0% |
| !!! | TTTTTTGACAAGAAAAAACT+TGG | - | chr4.1:62150651-62150670 | MS.gene72558:CDS | 20.0% |
| ! | AAAAGATGGTTGAATTTACA+AGG | - | chr4.1:62147690-62147709 | MS.gene72558:intron | 25.0% |
| ! | AATAATGCTAGGCATTATTA+AGG | - | chr4.1:62150604-62150623 | MS.gene72558:CDS | 25.0% |
| ! | ATAGTTGATCACAAAAATAG+CGG | - | chr4.1:62149608-62149627 | MS.gene72558:CDS | 25.0% |
| ! | ATTGAAAAATTGGGGAAATT+AGG | + | chr4.1:62147576-62147595 | None:intergenic | 25.0% |
| ! | CTCTAATCATAGATGTATAT+TGG | - | chr4.1:62148936-62148955 | MS.gene72558:intron | 25.0% |
| ! | GAATTTCATCAGATAACAAA+AGG | + | chr4.1:62147611-62147630 | None:intergenic | 25.0% |
| ! | GATCAATGATTGAAAAATTG+GGG | + | chr4.1:62147584-62147603 | None:intergenic | 25.0% |
| ! | GTAAAATTGCTTTACTTAGA+AGG | - | chr4.1:62149320-62149339 | MS.gene72558:intron | 25.0% |
| ! | GTATAAAGAAAATGCAACAA+GGG | + | chr4.1:62150015-62150034 | None:intergenic | 25.0% |
| ! | GTTACTTCTATATGTCTATA+TGG | + | chr4.1:62149242-62149261 | None:intergenic | 25.0% |
| ! | TATAAAGAAAATGCAACAAG+GGG | + | chr4.1:62150014-62150033 | None:intergenic | 25.0% |
| ! | TGTATAAAGAAAATGCAACA+AGG | + | chr4.1:62150016-62150035 | None:intergenic | 25.0% |
| ! | TTGAAAAATTGGGGAAATTA+GGG | + | chr4.1:62147575-62147594 | None:intergenic | 25.0% |
| !! | AGTAGTTTTCTAATAAACCT+AGG | - | chr4.1:62149783-62149802 | MS.gene72558:CDS | 25.0% |
| !! | ATAAACAATCATTTGAGTTC+GGG | + | chr4.1:62150514-62150533 | None:intergenic | 25.0% |
| !! | CATAACACAAATTAGTTTAG+AGG | - | chr4.1:62148842-62148861 | MS.gene72558:intron | 25.0% |
| !! | TATCTGGTAGATTGATTTAT+AGG | - | chr4.1:62147757-62147776 | MS.gene72558:intron | 25.0% |
| !! | TTCTTTGAGAGTAGTAAATA+AGG | + | chr4.1:62149468-62149487 | None:intergenic | 25.0% |
| !!! | AAGGTGGCAAATTTTTTAAA+AGG | - | chr4.1:62149555-62149574 | MS.gene72558:intron | 25.0% |
| !!! | AATCATGTTGATTTGATTCA+TGG | - | chr4.1:62147792-62147811 | MS.gene72558:intron | 25.0% |
| !!! | ATCATGTTGATTTGATTCAT+GGG | - | chr4.1:62147793-62147812 | MS.gene72558:intron | 25.0% |
| !!! | ATTCATTGGTTTGTAAAAGA+TGG | - | chr4.1:62147676-62147695 | MS.gene72558:intron | 25.0% |
| !!! | ATTTTTTCTTTCAGTATGGT+TGG | - | chr4.1:62148994-62149013 | MS.gene72558:intron | 25.0% |
| !!! | GAATTTGCAGATTTTGAAAT+TGG | - | chr4.1:62148112-62148131 | MS.gene72558:intron | 25.0% |
| !!! | TAAGAAGATTGATTTGAATC+CGG | - | chr4.1:62148385-62148404 | MS.gene72558:intron | 25.0% |
| !!! | TAGTAAAAAGTGTTGTCAAA+TGG | + | chr4.1:62149682-62149701 | None:intergenic | 25.0% |
| !!! | TCATATTTTAACTTACCTCT+CGG | - | chr4.1:62148819-62148838 | MS.gene72558:CDS | 25.0% |
| !!! | TTTTGTGTATTGTTTGAAGT+TGG | - | chr4.1:62149192-62149211 | MS.gene72558:intron | 25.0% |
| AAAATGCTAACAAGTGTTCA+TGG | + | chr4.1:62150277-62150296 | None:intergenic | 30.0% | |
| AAATGCTAACAAGTGTTCAT+GGG | + | chr4.1:62150276-62150295 | None:intergenic | 30.0% | |
| AACCTTAAGTCTTAAGTTAG+AGG | + | chr4.1:62149064-62149083 | None:intergenic | 30.0% | |
| AATTTCCACTATAGTGAACT+GGG | + | chr4.1:62149987-62150006 | None:intergenic | 30.0% | |
| ACAGAGAAATGTGAATTCAT+TGG | - | chr4.1:62147662-62147681 | MS.gene72558:intron | 30.0% | |
| ACTATAACGCTATATCATAG+CGG | + | chr4.1:62149743-62149762 | None:intergenic | 30.0% | |
| AGATTATTATTCAGGATTGC+TGG | - | chr4.1:62148525-62148544 | MS.gene72558:intron | 30.0% | |
| ATAGATGTATATTGGCAATC+TGG | - | chr4.1:62148944-62148963 | MS.gene72558:intron | 30.0% | |
| ATTATTATTCAGGATTGCTG+GGG | - | chr4.1:62148527-62148546 | MS.gene72558:intron | 30.0% | |
| CAAACCAAATTTCAAAACGA+GGG | + | chr4.1:62150349-62150368 | None:intergenic | 30.0% | |
| CTACTCTCAAAGAATTGAAA+TGG | - | chr4.1:62149474-62149493 | MS.gene72558:intron | 30.0% | |
| CTTGTTGCAATATTGGAATA+AGG | + | chr4.1:62149115-62149134 | None:intergenic | 30.0% | |
| GATTAGAGACATTTCAACAT+TGG | + | chr4.1:62148924-62148943 | None:intergenic | 30.0% | |
| GATTATTATTCAGGATTGCT+GGG | - | chr4.1:62148526-62148545 | MS.gene72558:intron | 30.0% | |
| GCAATATTGGAATAAGGAAA+AGG | + | chr4.1:62149109-62149128 | None:intergenic | 30.0% | |
| TCAAACCAAATTTCAAAACG+AGG | + | chr4.1:62150350-62150369 | None:intergenic | 30.0% | |
| TCCTCACAATTAAACCAATT+CGG | + | chr4.1:62147897-62147916 | None:intergenic | 30.0% | |
| ! | ACAGATTATTTTCACTGACA+TGG | - | chr4.1:62149819-62149838 | MS.gene72558:CDS | 30.0% |
| ! | ACCAAATTTAACGCTTTAGA+TGG | + | chr4.1:62148758-62148777 | None:intergenic | 30.0% |
| ! | AGTGTAGTGATAATGTGTTA+AGG | - | chr4.1:62148072-62148091 | MS.gene72558:intron | 30.0% |
| ! | AGTTCACTATAGTGGAAATT+GGG | - | chr4.1:62149987-62150006 | MS.gene72558:CDS | 30.0% |
| ! | ATTGATTGCTGTTCTATTTC+AGG | - | chr4.1:62149294-62149313 | MS.gene72558:intron | 30.0% |
| ! | CTGTTGAGGTTATTGATAAT+GGG | - | chr4.1:62147928-62147947 | MS.gene72558:intron | 30.0% |
| ! | GGACACTTGATAATAATGTT+GGG | - | chr4.1:62150545-62150564 | MS.gene72558:CDS | 30.0% |
| ! | GTGTAGTGATAATGTGTTAA+GGG | - | chr4.1:62148073-62148092 | MS.gene72558:intron | 30.0% |
| ! | TAAACAATCATTTGAGTTCG+GGG | + | chr4.1:62150513-62150532 | None:intergenic | 30.0% |
| ! | TAGTTGCTATTAGACAACAA+TGG | - | chr4.1:62149759-62149778 | MS.gene72558:CDS | 30.0% |
| ! | TCCATCTAAAGCGTTAAATT+TGG | - | chr4.1:62148754-62148773 | MS.gene72558:CDS | 30.0% |
| ! | TCTAAAGCGTTAAATTTGGT+CGG | - | chr4.1:62148758-62148777 | MS.gene72558:CDS | 30.0% |
| ! | TGATAATAATGTTGGGTTGT+GGG | - | chr4.1:62150552-62150571 | MS.gene72558:CDS | 30.0% |
| ! | TGTAGTGATAATGTGTTAAG+GGG | - | chr4.1:62148074-62148093 | MS.gene72558:intron | 30.0% |
| ! | TTCCTTATTAGTCTGACAAA+AGG | + | chr4.1:62149931-62149950 | None:intergenic | 30.0% |
| ! | TTCCTTTTGTCAGACTAATA+AGG | - | chr4.1:62149926-62149945 | MS.gene72558:CDS | 30.0% |
| ! | TTGATAATAATGTTGGGTTG+TGG | - | chr4.1:62150551-62150570 | MS.gene72558:CDS | 30.0% |
| ! | TTGGTTTAAAGGCTTTGATT+TGG | + | chr4.1:62147493-62147512 | None:intergenic | 30.0% |
| ! | TTTACCTTTAGCTTAGATGT+TGG | - | chr4.1:62149877-62149896 | MS.gene72558:CDS | 30.0% |
| !! | AAGAAGATTGATTTGAATCC+GGG | - | chr4.1:62148386-62148405 | MS.gene72558:intron | 30.0% |
| !! | CTATCAACTTGTTGCAATAT+TGG | + | chr4.1:62149122-62149141 | None:intergenic | 30.0% |
| !! | TGAAATGGGTTTGTTAAGTT+TGG | - | chr4.1:62148010-62148029 | MS.gene72558:intron | 30.0% |
| !! | TGAAATTTGGTTTGAATGTG+CGG | - | chr4.1:62150355-62150374 | MS.gene72558:CDS | 30.0% |
| !!! | ATTTTATGGTTCGGTTGTTT+CGG | - | chr4.1:62148151-62148170 | MS.gene72558:intron | 30.0% |
| !!! | GATTGGAACTTTGTTTTATC+TGG | - | chr4.1:62147741-62147760 | MS.gene72558:intron | 30.0% |
| !!! | TGCAGATTTTGAAATTGGTT+GGG | - | chr4.1:62148117-62148136 | MS.gene72558:intron | 30.0% |
| !!! | TTGCAGATTTTGAAATTGGT+TGG | - | chr4.1:62148116-62148135 | MS.gene72558:intron | 30.0% |
| AAATTGGTTGGGAATGTTGA+GGG | - | chr4.1:62148128-62148147 | MS.gene72558:intron | 35.0% | |
| AATAGCGTATTACGGAACAA+TGG | - | chr4.1:62149702-62149721 | MS.gene72558:CDS | 35.0% | |
| AATTCAACACATAGTATCCC+AGG | + | chr4.1:62148876-62148895 | None:intergenic | 35.0% | |
| AATTCGCCATTGAAGAAACT+AGG | - | chr4.1:62147435-62147454 | MS.gene72558:CDS | 35.0% | |
| ACTTGAACCCTTCTCAAATT+AGG | + | chr4.1:62147978-62147997 | None:intergenic | 35.0% | |
| AGTTGACATTGTGTGATCAT+AGG | - | chr4.1:62148294-62148313 | MS.gene72558:intron | 35.0% | |
| AGTTTCTTCAATGGCGAATT+AGG | + | chr4.1:62147435-62147454 | None:intergenic | 35.0% | |
| ATGGTTGTCCTAATTTGAGA+AGG | - | chr4.1:62147967-62147986 | MS.gene72558:intron | 35.0% | |
| ATGTATATTGGCAATCTGGT+CGG | - | chr4.1:62148948-62148967 | MS.gene72558:intron | 35.0% | |
| ATTACGGAACAATGGTGATT+TGG | - | chr4.1:62149710-62149729 | MS.gene72558:CDS | 35.0% | |
| ATTAGTATGGGAAAGAAAGG+TGG | - | chr4.1:62149539-62149558 | MS.gene72558:intron | 35.0% | |
| ATTCAACACATAGTATCCCA+GGG | + | chr4.1:62148875-62148894 | None:intergenic | 35.0% | |
| ATTGCTAACAACAGAAGGTT+TGG | - | chr4.1:62149349-62149368 | MS.gene72558:intron | 35.0% | |
| CAATTTCCACTATAGTGAAC+TGG | + | chr4.1:62149988-62150007 | None:intergenic | 35.0% | |
| CACAAATTAGTTCATCACCA+GGG | + | chr4.1:62148798-62148817 | None:intergenic | 35.0% | |
| CACCTCTAACTTAAGACTTA+AGG | - | chr4.1:62149059-62149078 | MS.gene72558:intron | 35.0% | |
| CATTGAAGAAACTAGGAACA+CGG | - | chr4.1:62147442-62147461 | MS.gene72558:CDS | 35.0% | |
| CCATTATCAATAACCTCAAC+AGG | + | chr4.1:62147930-62147949 | None:intergenic | 35.0% | |
| CCTGTTGAGGTTATTGATAA+TGG | - | chr4.1:62147927-62147946 | MS.gene72558:intron | 35.0% | |
| CTATAGCGTTGTAATGTAGT+AGG | + | chr4.1:62149645-62149664 | None:intergenic | 35.0% | |
| CTCTCAAAGAATTGAAATGG+AGG | - | chr4.1:62149477-62149496 | MS.gene72558:intron | 35.0% | |
| GTAAATAAGGTTGCAAGTGA+AGG | + | chr4.1:62149455-62149474 | None:intergenic | 35.0% | |
| GTCTGTAATACATTCATGGA+AGG | - | chr4.1:62149373-62149392 | MS.gene72558:intron | 35.0% | |
| GTTGAATTTACAAGGTCGTT+TGG | - | chr4.1:62147698-62147717 | MS.gene72558:intron | 35.0% | |
| GTTTCTTCAATGGCGAATTA+GGG | + | chr4.1:62147434-62147453 | None:intergenic | 35.0% | |
| TCAGATTGTTCATTTCGCAA+TGG | + | chr4.1:62150769-62150788 | None:intergenic | 35.0% | |
| TGCTAGGGAGATTATTATTC+AGG | - | chr4.1:62148517-62148536 | MS.gene72558:intron | 35.0% | |
| TGGAGTCTGTAATACATTCA+TGG | - | chr4.1:62149369-62149388 | MS.gene72558:intron | 35.0% | |
| TGGTTGTCCTAATTTGAGAA+GGG | - | chr4.1:62147968-62147987 | MS.gene72558:intron | 35.0% | |
| TTCACATTTCTCTGTGAATC+TGG | + | chr4.1:62147657-62147676 | None:intergenic | 35.0% | |
| TTCTTTCAGTATGGTTGGAA+TGG | - | chr4.1:62148999-62149018 | MS.gene72558:intron | 35.0% | |
| TTGATGGGATTAAGGCTATT+GGG | - | chr4.1:62148249-62148268 | MS.gene72558:intron | 35.0% | |
| TTGTCAAATGGCAACTATAG+CGG | + | chr4.1:62149670-62149689 | None:intergenic | 35.0% | |
| TTTCCTGTTTGATTGACGAT+TGG | - | chr4.1:62148666-62148685 | MS.gene72558:intron | 35.0% | |
| TTTGATACATTCAGAGACGA+TGG | + | chr4.1:62150390-62150409 | None:intergenic | 35.0% | |
| TTTGATGGGATTAAGGCTAT+TGG | - | chr4.1:62148248-62148267 | MS.gene72558:intron | 35.0% | |
| ! | CAGTTCACTATAGTGGAAAT+TGG | - | chr4.1:62149986-62150005 | MS.gene72558:CDS | 35.0% |
| ! | GCTATACTGTCTAGAACTTA+TGG | - | chr4.1:62148637-62148656 | MS.gene72558:intron | 35.0% |
| ! | GGGACACTTGATAATAATGT+TGG | - | chr4.1:62150544-62150563 | MS.gene72558:CDS | 35.0% |
| ! | GTAGTGATAATGTGTTAAGG+GGG | - | chr4.1:62148075-62148094 | MS.gene72558:intron | 35.0% |
| ! | TAAGGTTGTTGACTAGAACA+AGG | - | chr4.1:62149077-62149096 | MS.gene72558:intron | 35.0% |
| ! | TGTTGAGGGATTTTATGGTT+CGG | - | chr4.1:62148142-62148161 | MS.gene72558:intron | 35.0% |
| !! | AAATTAGGGTTTGATTTGCG+AGG | + | chr4.1:62147561-62147580 | None:intergenic | 35.0% |
| !! | AAATTTGGTTTGAATGTGCG+GGG | - | chr4.1:62150357-62150376 | MS.gene72558:CDS | 35.0% |
| !! | ATGGCTTTGTCGACTAAAAT+TGG | + | chr4.1:62149223-62149242 | None:intergenic | 35.0% |
| !! | ATTTGCAAAAGTGTCAGTTG+CGG | - | chr4.1:62148453-62148472 | MS.gene72558:intron | 35.0% |
| !! | CTGTTTTTCAAACAATGCCT+AGG | + | chr4.1:62149803-62149822 | None:intergenic | 35.0% |
| !! | GAAATTTGGTTTGAATGTGC+GGG | - | chr4.1:62150356-62150375 | MS.gene72558:CDS | 35.0% |
| !! | GCAACAACGATTTGGTTTAA+AGG | + | chr4.1:62147504-62147523 | None:intergenic | 35.0% |
| !! | GGATTTGATAATGGCATGTT+CGG | - | chr4.1:62148548-62148567 | MS.gene72558:intron | 35.0% |
| !!! | GTATCCCTCGTTTTGAAATT+TGG | - | chr4.1:62150342-62150361 | MS.gene72558:CDS | 35.0% |
| !!! | TTTTAGCTCAAGGTTGTAAG+AGG | - | chr4.1:62148189-62148208 | MS.gene72558:intron | 35.0% |
| AACTAACGCTCAACACATCA+TGG | + | chr4.1:62148724-62148743 | None:intergenic | 40.0% | |
| ACTTCTTCCATCAAGTCTTG+TGG | - | chr4.1:62149514-62149533 | MS.gene72558:intron | 40.0% | |
| ATTGTTATCCTTGCTCCAGT+TGG | - | chr4.1:62150682-62150701 | MS.gene72558:CDS | 40.0% | |
| CCACAAATTAGTTCATCACC+AGG | + | chr4.1:62148799-62148818 | None:intergenic | 40.0% | |
| CGTGTTCCTAGTTTCTTCAA+TGG | + | chr4.1:62147444-62147463 | None:intergenic | 40.0% | |
| GAAATTGGTTGGGAATGTTG+AGG | - | chr4.1:62148127-62148146 | MS.gene72558:intron | 40.0% | |
| GACATTGTGTGATCATAGGA+TGG | - | chr4.1:62148298-62148317 | MS.gene72558:intron | 40.0% | |
| GATTGCTGGGGATTTGATAA+TGG | - | chr4.1:62148539-62148558 | MS.gene72558:intron | 40.0% | |
| GATTGTTCATTTCGCAATGG+TGG | + | chr4.1:62150766-62150785 | None:intergenic | 40.0% | |
| GCTTACATGAGACTACTCTA+AGG | + | chr4.1:62149409-62149428 | None:intergenic | 40.0% | |
| GGAAGAAGTGATTTCGTATC+TGG | + | chr4.1:62149503-62149522 | None:intergenic | 40.0% | |
| GTGAGAATTTGAAGACGTTG+AGG | - | chr4.1:62148351-62148370 | MS.gene72558:intron | 40.0% | |
| GTGTTCTACATTGCAGGAAT+TGG | - | chr4.1:62148040-62148059 | MS.gene72558:intron | 40.0% | |
| TAATGTGTTAAGGGGGATTG+CGG | - | chr4.1:62148082-62148101 | MS.gene72558:intron | 40.0% | |
| TCAATGGCGAATTAGGGTTA+GGG | + | chr4.1:62147428-62147447 | None:intergenic | 40.0% | |
| TGCTCATTGCTAACAACAGA+AGG | - | chr4.1:62149344-62149363 | MS.gene72558:intron | 40.0% | |
| TGTATATTGGCAATCTGGTC+GGG | - | chr4.1:62148949-62148968 | MS.gene72558:intron | 40.0% | |
| TGTGATCATAGGATGGATGA+TGG | - | chr4.1:62148305-62148324 | MS.gene72558:intron | 40.0% | |
| TTAGCAAGTTCAAGAGCTAC+AGG | + | chr4.1:62150086-62150105 | None:intergenic | 40.0% | |
| TTCAATGGCGAATTAGGGTT+AGG | + | chr4.1:62147429-62147448 | None:intergenic | 40.0% | |
| TTGAGAAGGGTTCAAGTGAT+TGG | - | chr4.1:62147981-62148000 | MS.gene72558:intron | 40.0% | |
| TTGCATGTAATGTTGGATGC+TGG | - | chr4.1:62150313-62150332 | MS.gene72558:CDS | 40.0% | |
| TTGCCAATCGTCAATCAAAC+AGG | + | chr4.1:62148672-62148691 | None:intergenic | 40.0% | |
| ! | AAGTCTTGTGGGGATTAGTA+TGG | - | chr4.1:62149526-62149545 | MS.gene72558:intron | 40.0% |
| ! | ACCTTTAGCTTAGATGTTGG+CGG | - | chr4.1:62149880-62149899 | MS.gene72558:CDS | 40.0% |
| ! | AGTCTTGTGGGGATTAGTAT+GGG | - | chr4.1:62149527-62149546 | MS.gene72558:intron | 40.0% |
| ! | CCTGGTGATGAACTAATTTG+TGG | - | chr4.1:62148796-62148815 | MS.gene72558:CDS | 40.0% |
| ! | CTAATTTGTGTTATGCCGAG+AGG | + | chr4.1:62148837-62148856 | None:intergenic | 40.0% |
| ! | CTTCTTCCATCAAGTCTTGT+GGG | - | chr4.1:62149515-62149534 | MS.gene72558:intron | 40.0% |
| ! | GCCGAATTGGTTTAATTGTG+AGG | - | chr4.1:62147893-62147912 | MS.gene72558:intron | 40.0% |
| ! | GGGAATGTTGAGGGATTTTA+TGG | - | chr4.1:62148137-62148156 | MS.gene72558:intron | 40.0% |
| ! | GGGATTAGTATGGGAAAGAA+AGG | - | chr4.1:62149536-62149555 | MS.gene72558:intron | 40.0% |
| ! | TTCTTCCATCAAGTCTTGTG+GGG | - | chr4.1:62149516-62149535 | MS.gene72558:intron | 40.0% |
| ! | TTGTGAAGCTTGAGCTTTGT+GGG | - | chr4.1:62148213-62148232 | MS.gene72558:intron | 40.0% |
| !! | AGGGAGTTTTGATGGGATTA+AGG | - | chr4.1:62148241-62148260 | MS.gene72558:intron | 40.0% |
| !! | AGTGATTGGTGCTAGTGAAA+TGG | - | chr4.1:62147995-62148014 | MS.gene72558:intron | 40.0% |
| !! | ATCATAGGATGGATGATGGA+TGG | - | chr4.1:62148309-62148328 | MS.gene72558:intron | 40.0% |
| !! | GGGTTAGTTGCTTTAGCTAA+TGG | - | chr4.1:62147948-62147967 | MS.gene72558:intron | 40.0% |
| !! | GTGATTGGTGCTAGTGAAAT+GGG | - | chr4.1:62147996-62148015 | MS.gene72558:intron | 40.0% |
| !! | TGAAGAGTGTTCTACATTGC+AGG | - | chr4.1:62148034-62148053 | MS.gene72558:intron | 40.0% |
| !! | TTTGCAAAAGTGTCAGTTGC+GGG | - | chr4.1:62148454-62148473 | MS.gene72558:intron | 40.0% |
| !!! | GGCTTTGTTTTCTGTTTGCA+GGG | - | chr4.1:62148493-62148512 | MS.gene72558:intron | 40.0% |
| !!! | GGTTTGACGATTTTAGCTCA+AGG | - | chr4.1:62148179-62148198 | MS.gene72558:intron | 40.0% |
| AACCATGTTACCGTTGTCTG+TGG | - | chr4.1:62150059-62150078 | MS.gene72558:CDS | 45.0% | |
| ACACATAGTATCCCAGGGAA+AGG | + | chr4.1:62148870-62148889 | None:intergenic | 45.0% | |
| ACCATGTTACCGTTGTCTGT+GGG | - | chr4.1:62150060-62150079 | MS.gene72558:CDS | 45.0% | |
| ACCGCCAACATCTAAGCTAA+AGG | + | chr4.1:62149884-62149903 | None:intergenic | 45.0% | |
| CAAACTCAATGACTGCACTG+AGG | + | chr4.1:62150714-62150733 | None:intergenic | 45.0% | |
| CACATAGTATCCCAGGGAAA+GGG | + | chr4.1:62148869-62148888 | None:intergenic | 45.0% | |
| CCCAAATACTCATCAAGTCC+CGG | + | chr4.1:62148407-62148426 | None:intergenic | 45.0% | |
| CCGGGACTTGATGAGTATTT+GGG | - | chr4.1:62148404-62148423 | MS.gene72558:intron | 45.0% | |
| CTAATCCCCACAAGACTTGA+TGG | + | chr4.1:62149524-62149543 | None:intergenic | 45.0% | |
| CTTGTGAAGCTTGAGCTTTG+TGG | - | chr4.1:62148212-62148231 | MS.gene72558:intron | 45.0% | |
| GAACACGGTGGTCTGATTTA+TGG | - | chr4.1:62147457-62147476 | MS.gene72558:intron | 45.0% | |
| GCGAATTAGGGTTAGGGTTA+GGG | + | chr4.1:62147422-62147441 | None:intergenic | 45.0% | |
| GGAGAATATGCTTCCTGTTG+AGG | - | chr4.1:62147914-62147933 | MS.gene72558:intron | 45.0% | |
| GTATATTGGCAATCTGGTCG+GGG | - | chr4.1:62148950-62148969 | MS.gene72558:intron | 45.0% | |
| GTATGGCTCATGCTAGTAAC+CGG | - | chr4.1:62150128-62150147 | MS.gene72558:CDS | 45.0% | |
| TATATTGGCAATCTGGTCGG+GGG | - | chr4.1:62148951-62148970 | MS.gene72558:intron | 45.0% | |
| TCCGGGACTTGATGAGTATT+TGG | - | chr4.1:62148403-62148422 | MS.gene72558:intron | 45.0% | |
| TCTCTGTGAATCTGGAAGCT+TGG | + | chr4.1:62147649-62147668 | None:intergenic | 45.0% | |
| TGAAGAAACTAGGAACACGG+TGG | - | chr4.1:62147445-62147464 | MS.gene72558:CDS | 45.0% | |
| TTCTGTTTGCAGGGTTGCTA+GGG | - | chr4.1:62148502-62148521 | MS.gene72558:intron | 45.0% | |
| TTGCAGCAGCAACAACGATT+TGG | + | chr4.1:62147512-62147531 | None:intergenic | 45.0% | |
| TTTCCTTGACAACGTCTCAG+AGG | + | chr4.1:62150156-62150175 | None:intergenic | 45.0% | |
| TTTCTGTTTGCAGGGTTGCT+AGG | - | chr4.1:62148501-62148520 | MS.gene72558:intron | 45.0% | |
| ! | GGTTCGGTTGTTTCGGATAT+TGG | - | chr4.1:62148158-62148177 | MS.gene72558:intron | 45.0% |
| ! | GTCGTTTGGTTCGATCGATT+CGG | - | chr4.1:62147712-62147731 | MS.gene72558:intron | 45.0% |
| ! | TATCCTTGCTCCAGTTGGTA+TGG | - | chr4.1:62150687-62150706 | MS.gene72558:CDS | 45.0% |
| ! | TTGAGCTTTGTGGGTGTGAA+GGG | - | chr4.1:62148222-62148241 | MS.gene72558:intron | 45.0% |
| ! | TTTAGCTTAGATGTTGGCGG+TGG | - | chr4.1:62149883-62149902 | MS.gene72558:CDS | 45.0% |
| !! | GAAGTGTTGTCAGATGTTGG+AGG | - | chr4.1:62148271-62148290 | MS.gene72558:intron | 45.0% |
| !! | GATCGATTCGGATTCGTGAT+TGG | - | chr4.1:62147724-62147743 | MS.gene72558:intron | 45.0% |
| !! | GGTGTGAAGGGAGTTTTGAT+GGG | - | chr4.1:62148234-62148253 | MS.gene72558:intron | 45.0% |
| !! | TAGGATGGATGATGGATGGA+TGG | - | chr4.1:62148313-62148332 | MS.gene72558:intron | 45.0% |
| !! | TGGGAAGTGTTGTCAGATGT+TGG | - | chr4.1:62148268-62148287 | MS.gene72558:intron | 45.0% |
| !!! | CGGCTTTGTTTTCTGTTTGC+AGG | - | chr4.1:62148492-62148511 | MS.gene72558:intron | 45.0% |
| AAATGCAGCCTCTCAAGTGC+AGG | + | chr4.1:62148437-62148456 | None:intergenic | 50.0% | |
| AGTTTAGAGGTCCCTTTCCC+TGG | - | chr4.1:62148855-62148874 | MS.gene72558:intron | 50.0% | |
| ATATTGGCAATCTGGTCGGG+GGG | - | chr4.1:62148952-62148971 | MS.gene72558:intron | 50.0% | |
| CTACGCCCAGTTCACTATAG+TGG | - | chr4.1:62149979-62149998 | MS.gene72558:CDS | 50.0% | |
| GGCGAATTAGGGTTAGGGTT+AGG | + | chr4.1:62147423-62147442 | None:intergenic | 50.0% | |
| GTTCTTGTCCTGCACTTGAG+AGG | - | chr4.1:62148426-62148445 | MS.gene72558:intron | 50.0% | |
| GTTTAGAGGTCCCTTTCCCT+GGG | - | chr4.1:62148856-62148875 | MS.gene72558:intron | 50.0% | |
| TCATCACCAGGGATCGAACT+CGG | + | chr4.1:62148787-62148806 | None:intergenic | 50.0% | |
| TCGCAATGGTGGTAGAGCTA+TGG | + | chr4.1:62150755-62150774 | None:intergenic | 50.0% | |
| TCGGCTTTGCAACTGTTTGC+AGG | - | chr4.1:62148567-62148586 | MS.gene72558:intron | 50.0% | |
| ! | CTTGAGCTTTGTGGGTGTGA+AGG | - | chr4.1:62148221-62148240 | MS.gene72558:intron | 50.0% |
| ! | GCGGGATAAGAAGAGTGTGT+CGG | - | chr4.1:62148472-62148491 | MS.gene72558:intron | 50.0% |
| !! | GGGTGTGAAGGGAGTTTTGA+TGG | - | chr4.1:62148233-62148252 | MS.gene72558:intron | 50.0% |
| AGCTACAGGCCCACAGACAA+CGG | + | chr4.1:62150072-62150091 | None:intergenic | 55.0% | |
| ATTCTGGGTCGACGCCGAAT+TGG | - | chr4.1:62147880-62147899 | MS.gene72558:intron | 55.0% | |
| CATCACCAGGGATCGAACTC+GGG | + | chr4.1:62148786-62148805 | None:intergenic | 55.0% | |
| GCACTGAGGACCATACCAAC+TGG | + | chr4.1:62150700-62150719 | None:intergenic | 55.0% | |
| GCCCACAGACAACGGTAACA+TGG | + | chr4.1:62150064-62150083 | None:intergenic | 55.0% | |
| GGACCATACCAACTGGAGCA+AGG | + | chr4.1:62150693-62150712 | None:intergenic | 55.0% | |
| TATTGGCAATCTGGTCGGGG+GGG | - | chr4.1:62148953-62148972 | MS.gene72558:intron | 55.0% | |
| ! | TGACAACGTCTCAGAGGCAC+CGG | + | chr4.1:62150150-62150169 | None:intergenic | 55.0% |
| !! | GGATGATGGATGGATGGCTG+CGG | - | chr4.1:62148319-62148338 | MS.gene72558:intron | 55.0% |
| !! | GTGCCTCTGAGACGTTGTCA+AGG | - | chr4.1:62150150-62150169 | MS.gene72558:CDS | 55.0% |
| TAAGGGGGATTGCGGCGTGT+GGG | - | chr4.1:62148090-62148109 | MS.gene72558:intron | 60.0% | |
| TTAAGGGGGATTGCGGCGTG+TGG | - | chr4.1:62148089-62148108 | MS.gene72558:intron | 60.0% | |
| CGGTACCCGAGTTCGATCCC+TGG | - | chr4.1:62148778-62148797 | MS.gene72558:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 62147372 | 62150804 | 62147372 | ID=MS.gene72558 |
| chr4.1 | mRNA | 62147372 | 62150804 | 62147372 | ID=MS.gene72558.t1;Parent=MS.gene72558 |
| chr4.1 | exon | 62149588 | 62150804 | 62149588 | ID=MS.gene72558.t1.exon1;Parent=MS.gene72558.t1 |
| chr4.1 | CDS | 62149588 | 62150804 | 62149588 | ID=cds.MS.gene72558.t1;Parent=MS.gene72558.t1 |
| chr4.1 | exon | 62148754 | 62148860 | 62148754 | ID=MS.gene72558.t1.exon2;Parent=MS.gene72558.t1 |
| chr4.1 | CDS | 62148754 | 62148860 | 62148754 | ID=cds.MS.gene72558.t1;Parent=MS.gene72558.t1 |
| chr4.1 | exon | 62147372 | 62147475 | 62147372 | ID=MS.gene72558.t1.exon3;Parent=MS.gene72558.t1 |
| chr4.1 | CDS | 62147372 | 62147475 | 62147372 | ID=cds.MS.gene72558.t1;Parent=MS.gene72558.t1 |
| Gene Sequence |
| Protein sequence |
