Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73913.t1 | XP_003601506.1 | 97.1 | 624 | 18 | 0 | 1 | 624 | 1 | 624 | 0.00E+00 | 1257.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73913.t1 | Q7XUK4 | 62.4 | 630 | 224 | 8 | 1 | 624 | 1 | 623 | 2.0e-229 | 796.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73913.t1 | G7J8S6 | 97.1 | 624 | 18 | 0 | 1 | 624 | 1 | 624 | 0.0e+00 | 1257.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049611 | MS.gene73913 | 0.80477 | 1.84E-49 | -1.69E-46 |
MS.gene049634 | MS.gene73913 | 0.803945 | 2.74E-49 | -1.69E-46 |
MS.gene050381 | MS.gene73913 | 0.814798 | 1.28E-51 | -1.69E-46 |
MS.gene050809 | MS.gene73913 | 0.802942 | 4.41E-49 | -1.69E-46 |
MS.gene05104 | MS.gene73913 | 0.805206 | 1.49E-49 | -1.69E-46 |
MS.gene051138 | MS.gene73913 | 0.81864 | 1.76E-52 | -1.69E-46 |
MS.gene053406 | MS.gene73913 | 0.824624 | 7.30E-54 | -1.69E-46 |
MS.gene053488 | MS.gene73913 | 0.808682 | 2.75E-50 | -1.69E-46 |
MS.gene054708 | MS.gene73913 | 0.805461 | 1.32E-49 | -1.69E-46 |
MS.gene054742 | MS.gene73913 | 0.814704 | 1.35E-51 | -1.69E-46 |
MS.gene055124 | MS.gene73913 | 0.81807 | 2.37E-52 | -1.69E-46 |
MS.gene055154 | MS.gene73913 | 0.821406 | 4.11E-53 | -1.69E-46 |
MS.gene056313 | MS.gene73913 | 0.806827 | 6.81E-50 | -1.69E-46 |
MS.gene056590 | MS.gene73913 | 0.805964 | 1.04E-49 | -1.69E-46 |
MS.gene056591 | MS.gene73913 | 0.8084 | 3.16E-50 | -1.69E-46 |
MS.gene058093 | MS.gene73913 | 0.825624 | 4.23E-54 | -1.69E-46 |
MS.gene058099 | MS.gene73913 | 0.827302 | 1.69E-54 | -1.69E-46 |
MS.gene058108 | MS.gene73913 | 0.801704 | 7.94E-49 | -1.69E-46 |
MS.gene058109 | MS.gene73913 | 0.805898 | 1.07E-49 | -1.69E-46 |
MS.gene058171 | MS.gene73913 | 0.813037 | 3.13E-51 | -1.69E-46 |
MS.gene058173 | MS.gene73913 | 0.80727 | 5.49E-50 | -1.69E-46 |
MS.gene058175 | MS.gene73913 | 0.818442 | 1.96E-52 | -1.69E-46 |
MS.gene059037 | MS.gene73913 | 0.819958 | 8.83E-53 | -1.69E-46 |
MS.gene059038 | MS.gene73913 | 0.800234 | 1.59E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73913.t1 | MTR_3g082440 | 97.115 | 624 | 18 | 0 | 1 | 624 | 1 | 624 | 0.0 | 1267 |
MS.gene73913.t1 | MTR_2g028480 | 58.728 | 613 | 239 | 5 | 1 | 608 | 3 | 606 | 0.0 | 701 |
MS.gene73913.t1 | MTR_4g128810 | 53.254 | 507 | 85 | 12 | 118 | 619 | 5 | 364 | 1.04e-158 | 460 |
MS.gene73913.t1 | MTR_3g090540 | 43.038 | 553 | 297 | 11 | 66 | 608 | 57 | 601 | 2.95e-147 | 439 |
MS.gene73913.t1 | MTR_3g113720 | 39.850 | 532 | 276 | 16 | 88 | 597 | 15 | 524 | 1.90e-103 | 324 |
MS.gene73913.t1 | MTR_8g099410 | 40.650 | 492 | 258 | 15 | 116 | 596 | 28 | 496 | 7.13e-97 | 306 |
MS.gene73913.t1 | MTR_8g099410 | 40.854 | 492 | 257 | 16 | 116 | 596 | 28 | 496 | 7.56e-96 | 307 |
MS.gene73913.t1 | MTR_8g075990 | 41.068 | 487 | 253 | 14 | 117 | 593 | 64 | 526 | 5.38e-95 | 302 |
MS.gene73913.t1 | MTR_5g093590 | 39.592 | 490 | 259 | 15 | 116 | 591 | 34 | 500 | 2.35e-93 | 297 |
MS.gene73913.t1 | MTR_4g074960 | 38.945 | 493 | 268 | 14 | 116 | 597 | 28 | 498 | 3.92e-93 | 300 |
MS.gene73913.t1 | MTR_3g080810 | 39.175 | 485 | 254 | 17 | 116 | 588 | 35 | 490 | 4.00e-93 | 296 |
MS.gene73913.t1 | MTR_3g080190 | 39.228 | 492 | 263 | 15 | 110 | 588 | 34 | 502 | 8.69e-93 | 296 |
MS.gene73913.t1 | MTR_5g085730 | 39.014 | 487 | 255 | 17 | 116 | 586 | 31 | 491 | 2.95e-92 | 294 |
MS.gene73913.t1 | MTR_5g009970 | 38.306 | 496 | 257 | 14 | 116 | 598 | 41 | 500 | 4.23e-92 | 293 |
MS.gene73913.t1 | MTR_5g010000 | 38.272 | 486 | 257 | 14 | 116 | 591 | 40 | 492 | 2.98e-88 | 283 |
MS.gene73913.t1 | MTR_3g010330 | 40.535 | 486 | 243 | 19 | 116 | 588 | 25 | 477 | 2.23e-87 | 280 |
MS.gene73913.t1 | MTR_3g117500 | 38.604 | 487 | 256 | 17 | 116 | 588 | 24 | 481 | 1.82e-86 | 278 |
MS.gene73913.t1 | MTR_3g105230 | 36.632 | 475 | 247 | 16 | 116 | 576 | 30 | 464 | 6.97e-85 | 274 |
MS.gene73913.t1 | MTR_3g023740 | 37.832 | 489 | 256 | 15 | 116 | 593 | 30 | 481 | 1.89e-84 | 273 |
MS.gene73913.t1 | MTR_8g104820 | 38.398 | 487 | 257 | 17 | 116 | 588 | 30 | 487 | 6.38e-83 | 269 |
MS.gene73913.t1 | MTR_1g037340 | 37.403 | 516 | 270 | 17 | 87 | 591 | 8 | 481 | 5.18e-81 | 264 |
MS.gene73913.t1 | MTR_4g035955 | 39.220 | 487 | 245 | 18 | 116 | 588 | 14 | 463 | 1.98e-80 | 262 |
MS.gene73913.t1 | MTR_5g009970 | 37.333 | 450 | 235 | 13 | 162 | 598 | 11 | 426 | 1.32e-77 | 253 |
MS.gene73913.t1 | MTR_4g035975 | 35.397 | 517 | 279 | 17 | 98 | 593 | 9 | 491 | 3.37e-76 | 251 |
MS.gene73913.t1 | MTR_4g035930 | 37.681 | 483 | 258 | 17 | 116 | 588 | 15 | 464 | 4.58e-76 | 250 |
MS.gene73913.t1 | MTR_1g088190 | 37.223 | 497 | 246 | 17 | 116 | 597 | 39 | 484 | 7.23e-74 | 245 |
MS.gene73913.t1 | MTR_5g009970 | 35.566 | 433 | 232 | 13 | 179 | 598 | 1 | 399 | 9.20e-67 | 224 |
MS.gene73913.t1 | MTR_3g082460 | 39.418 | 378 | 120 | 11 | 246 | 603 | 3 | 291 | 2.37e-65 | 217 |
MS.gene73913.t1 | MTR_5g009970 | 35.185 | 324 | 176 | 10 | 285 | 598 | 32 | 331 | 3.16e-48 | 172 |
MS.gene73913.t1 | MTR_1g088190 | 39.799 | 299 | 132 | 12 | 103 | 393 | 25 | 283 | 1.56e-39 | 148 |
MS.gene73913.t1 | MTR_7g108925 | 36.257 | 171 | 102 | 3 | 429 | 596 | 37 | 203 | 1.34e-28 | 114 |
MS.gene73913.t1 | MTR_0393s0050 | 37.888 | 161 | 85 | 5 | 423 | 572 | 1 | 157 | 5.58e-25 | 102 |
MS.gene73913.t1 | MTR_1g037320 | 43.605 | 172 | 79 | 6 | 179 | 345 | 1 | 159 | 4.18e-24 | 103 |
MS.gene73913.t1 | MTR_1g037320 | 40.476 | 126 | 70 | 3 | 467 | 588 | 164 | 288 | 1.54e-19 | 89.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73913.t1 | AT1G65610 | 60.925 | 627 | 238 | 5 | 1 | 624 | 1 | 623 | 0.0 | 772 |
MS.gene73913.t1 | AT5G49720 | 58.279 | 616 | 238 | 9 | 1 | 608 | 1 | 605 | 0.0 | 678 |
MS.gene73913.t1 | AT4G24260 | 55.663 | 618 | 256 | 9 | 1 | 611 | 1 | 607 | 0.0 | 619 |
MS.gene73913.t1 | AT4G24260 | 54.016 | 498 | 213 | 7 | 1 | 492 | 1 | 488 | 2.66e-157 | 461 |
MS.gene73913.t1 | AT4G24260 | 52.262 | 442 | 195 | 7 | 1 | 436 | 1 | 432 | 1.65e-132 | 396 |
MS.gene73913.t1 | AT1G75680 | 43.432 | 472 | 237 | 12 | 117 | 582 | 58 | 505 | 4.65e-102 | 320 |
MS.gene73913.t1 | AT1G19940 | 41.752 | 491 | 251 | 13 | 106 | 585 | 33 | 499 | 2.57e-101 | 318 |
MS.gene73913.t1 | AT1G19940 | 41.752 | 491 | 251 | 13 | 106 | 585 | 33 | 499 | 2.57e-101 | 318 |
MS.gene73913.t1 | AT4G11050 | 38.213 | 526 | 279 | 18 | 116 | 624 | 26 | 522 | 4.41e-93 | 297 |
MS.gene73913.t1 | AT1G02800 | 40.562 | 498 | 256 | 16 | 107 | 594 | 34 | 501 | 8.29e-93 | 295 |
MS.gene73913.t1 | AT4G11050 | 38.213 | 526 | 279 | 18 | 116 | 624 | 26 | 522 | 2.35e-92 | 298 |
MS.gene73913.t1 | AT4G11050 | 38.213 | 526 | 279 | 18 | 116 | 624 | 26 | 522 | 2.36e-92 | 298 |
MS.gene73913.t1 | AT4G02290 | 41.649 | 485 | 241 | 16 | 116 | 588 | 52 | 506 | 2.59e-92 | 295 |
MS.gene73913.t1 | AT4G09740 | 36.531 | 490 | 267 | 14 | 116 | 595 | 23 | 478 | 1.35e-90 | 289 |
MS.gene73913.t1 | AT4G23560 | 38.776 | 490 | 256 | 15 | 117 | 596 | 24 | 479 | 4.86e-89 | 285 |
MS.gene73913.t1 | AT2G32990 | 39.095 | 486 | 260 | 16 | 116 | 588 | 39 | 501 | 1.05e-88 | 285 |
MS.gene73913.t1 | AT2G44570 | 37.378 | 511 | 282 | 14 | 92 | 591 | 8 | 491 | 1.74e-88 | 284 |
MS.gene73913.t1 | AT1G64390 | 39.264 | 489 | 263 | 16 | 116 | 593 | 25 | 490 | 1.98e-88 | 287 |
MS.gene73913.t1 | AT4G39000 | 39.069 | 494 | 259 | 17 | 114 | 593 | 23 | 488 | 1.20e-86 | 279 |
MS.gene73913.t1 | AT1G71380 | 40.123 | 486 | 244 | 19 | 116 | 588 | 24 | 475 | 4.13e-86 | 277 |
MS.gene73913.t1 | AT1G22880 | 40.119 | 506 | 248 | 20 | 98 | 588 | 10 | 475 | 3.32e-85 | 275 |
MS.gene73913.t1 | AT1G70710 | 37.945 | 506 | 270 | 17 | 96 | 588 | 8 | 482 | 6.38e-85 | 275 |
MS.gene73913.t1 | AT3G43860 | 38.697 | 491 | 249 | 17 | 116 | 593 | 34 | 485 | 8.54e-85 | 274 |
MS.gene73913.t1 | AT3G43860 | 38.697 | 491 | 249 | 17 | 116 | 593 | 34 | 485 | 8.54e-85 | 274 |
MS.gene73913.t1 | AT4G39010 | 36.290 | 496 | 274 | 18 | 116 | 597 | 29 | 496 | 4.96e-83 | 270 |
MS.gene73913.t1 | AT1G23210 | 38.193 | 487 | 255 | 19 | 116 | 588 | 28 | 482 | 5.26e-83 | 269 |
MS.gene73913.t1 | AT2G44550 | 36.117 | 515 | 278 | 16 | 86 | 588 | 11 | 486 | 6.00e-82 | 266 |
MS.gene73913.t1 | AT1G48930 | 39.085 | 481 | 261 | 13 | 116 | 586 | 30 | 488 | 1.00e-80 | 267 |
MS.gene73913.t1 | AT2G44540 | 36.047 | 516 | 281 | 16 | 86 | 588 | 11 | 490 | 1.76e-80 | 263 |
MS.gene73913.t1 | AT4G38990 | 35.977 | 517 | 275 | 19 | 93 | 588 | 5 | 486 | 2.33e-80 | 263 |
MS.gene73913.t1 | AT2G44560 | 37.372 | 487 | 265 | 16 | 116 | 591 | 33 | 490 | 2.85e-74 | 246 |
MS.gene73913.t1 | AT4G02290 | 39.336 | 422 | 216 | 15 | 179 | 588 | 1 | 394 | 1.82e-68 | 228 |
MS.gene73913.t1 | AT1G19940 | 39.196 | 398 | 208 | 12 | 106 | 492 | 33 | 407 | 3.44e-68 | 228 |
MS.gene73913.t1 | AT1G22880 | 38.353 | 425 | 213 | 18 | 179 | 588 | 1 | 391 | 1.48e-64 | 218 |
MS.gene73913.t1 | AT2G44570 | 34.752 | 423 | 242 | 12 | 92 | 507 | 8 | 403 | 5.50e-56 | 195 |
MS.gene73913.t1 | AT4G39010 | 34.367 | 387 | 219 | 15 | 116 | 493 | 29 | 389 | 2.77e-54 | 190 |
MS.gene73913.t1 | AT1G22880 | 41.194 | 335 | 152 | 15 | 98 | 423 | 10 | 308 | 6.71e-46 | 166 |
MS.gene73913.t1 | AT4G38990 | 33.245 | 379 | 193 | 14 | 93 | 464 | 5 | 330 | 4.62e-44 | 161 |
Find 155 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGGTCTTCTTCTTCATATT+TGG | 0.162977 | 3.3:+69296354 | None:intergenic |
AAGACCAAGTATGTGGATTT+TGG | 0.214969 | 3.3:-69296339 | MS.gene73913:CDS |
CATGAAATTCCATTGCTCTT+TGG | 0.243720 | 3.3:+69293293 | None:intergenic |
ATGCCAGAGAACTCATTAAA+TGG | 0.258995 | 3.3:-69293088 | MS.gene73913:CDS |
TGAAATTGGTCAAAACTATT+TGG | 0.259930 | 3.3:+69291130 | None:intergenic |
ACAGATATTGGAAAGAAATT+AGG | 0.286784 | 3.3:+69291824 | None:intergenic |
CGTGGATAGCTCATGTCTTC+TGG | 0.287615 | 3.3:+69292603 | None:intergenic |
AATGCCTTTAGAACAGATAT+TGG | 0.289238 | 3.3:+69291812 | None:intergenic |
CTGTAATGTTGTTAGGATTT+CGG | 0.297943 | 3.3:+69291170 | None:intergenic |
TGTGCTTGTTAAGGAAATTA+AGG | 0.304790 | 3.3:+69291042 | None:intergenic |
ATTGCTCCTGTAATGTTGTT+AGG | 0.311527 | 3.3:+69291163 | None:intergenic |
TAACCGGATGAGTTATAAAA+AGG | 0.314921 | 3.3:+69292387 | None:intergenic |
ATCAATTCAATGTCTTCAAT+TGG | 0.326835 | 3.3:-69292092 | MS.gene73913:CDS |
TTTGAAGCTATTCCACCATT+TGG | 0.352217 | 3.3:-69290989 | MS.gene73913:CDS |
TTTGAAGGACCTGACCTTGC+AGG | 0.353162 | 3.3:-69292564 | MS.gene73913:CDS |
TTCCAAGGAGGTGGTGGAGG+TGG | 0.363591 | 3.3:+69290956 | None:intergenic |
CGAAATCCTAACAACATTAC+AGG | 0.366600 | 3.3:-69291169 | MS.gene73913:CDS |
GTGGATCACTGAATGGTTCT+AGG | 0.369729 | 3.3:-69292656 | MS.gene73913:CDS |
TAATCCTGGTTACCCTTATG+AGG | 0.370170 | 3.3:-69292169 | MS.gene73913:CDS |
ATGTTGTTAGGATTTCGGTT+AGG | 0.371448 | 3.3:+69291175 | None:intergenic |
TAGCAAAAGACATGGGAAAA+TGG | 0.378035 | 3.3:+69293177 | None:intergenic |
TGTTGTTAGGATTTCGGTTA+GGG | 0.380281 | 3.3:+69291176 | None:intergenic |
TAAAATGCCTTGGCATTCTT+AGG | 0.383795 | 3.3:+69292276 | None:intergenic |
TGCCAACAGTAGTGATCATC+TGG | 0.384464 | 3.3:+69292630 | None:intergenic |
TTGACCAATTTCATGATTCA+AGG | 0.387324 | 3.3:-69291120 | MS.gene73913:CDS |
ATGCAGCATTGACGACATAT+TGG | 0.389652 | 3.3:+69291909 | None:intergenic |
TTGCTATGACAATGCTAAGT+TGG | 0.392718 | 3.3:-69293160 | MS.gene73913:CDS |
ACTATGTAGCTCATGTTCAT+TGG | 0.395336 | 3.3:+69291304 | None:intergenic |
AATGTCTTCAATTGGACTAA+AGG | 0.398254 | 3.3:-69292084 | MS.gene73913:intron |
TGCCAGAGAACTCATTAAAT+GGG | 0.398898 | 3.3:-69293087 | MS.gene73913:CDS |
TGGTAAGACTAGTAACATTA+TGG | 0.398981 | 3.3:+69292130 | None:intergenic |
GCCATTTCTCCTGCAAGGTC+AGG | 0.400536 | 3.3:+69292555 | None:intergenic |
ATGAGCTACATAGTAGGATA+TGG | 0.410733 | 3.3:-69291295 | MS.gene73913:CDS |
TTGGCATTCTTAGGCACATC+AGG | 0.410800 | 3.3:+69292285 | None:intergenic |
CTTTCCAATATCTGTTCTAA+AGG | 0.414260 | 3.3:-69291816 | MS.gene73913:CDS |
TATACTGAACCAACTTTAGC+TGG | 0.415273 | 3.3:-69291085 | MS.gene73913:CDS |
GTTAGGATGTTTCTTAATCC+TGG | 0.415763 | 3.3:-69292183 | MS.gene73913:CDS |
ATACTAAGCATATCCTCATA+AGG | 0.417547 | 3.3:+69292156 | None:intergenic |
ACCTGACCTTGCAGGAGAAA+TGG | 0.419662 | 3.3:-69292556 | MS.gene73913:CDS |
CCATTGATCTCCGGTGCGGC+TGG | 0.426847 | 3.3:+69296455 | None:intergenic |
GGTTTCCAAGGAGGTGGTGG+AGG | 0.427321 | 3.3:+69290953 | None:intergenic |
TTTGCATTTGCAAGAGACTT+TGG | 0.429572 | 3.3:-69292450 | MS.gene73913:CDS |
CAAAGAGCAATGGAATTTCA+TGG | 0.434088 | 3.3:-69293292 | MS.gene73913:CDS |
AATTACTCATCATGCATTCA+AGG | 0.437438 | 3.3:-69296539 | None:intergenic |
ACTACCTGTTGTGCTTGTTA+AGG | 0.440011 | 3.3:+69291033 | None:intergenic |
TGTTGCTTCTAACAAGGGTT+AGG | 0.440413 | 3.3:-69292200 | MS.gene73913:CDS |
ATCCACCTCCACCACCTCCT+TGG | 0.444399 | 3.3:-69290958 | MS.gene73913:CDS |
CCTTCAAATACAGTCGTTGT+TGG | 0.444436 | 3.3:+69292579 | None:intergenic |
CAGCCGCACCGGAGATCAAT+GGG | 0.447656 | 3.3:-69296454 | MS.gene73913:CDS |
AAAACCTTGGCAATGATGAT+AGG | 0.448092 | 3.3:+69296240 | None:intergenic |
CTTCAAATACAGTCGTTGTT+GGG | 0.448957 | 3.3:+69292580 | None:intergenic |
AATACAGTCGTTGTTGGGCG+TGG | 0.450894 | 3.3:+69292585 | None:intergenic |
AAATACTACCTACATTTCCT+TGG | 0.451110 | 3.3:-69292316 | MS.gene73913:CDS |
TCATGCATTCAAGGAATCAA+TGG | 0.452562 | 3.3:-69296530 | MS.gene73913:CDS |
TGGTAATCGACGTGAGGGAT+TGG | 0.455806 | 3.3:-69296409 | MS.gene73913:CDS |
AGAGCAAGGGTGTAATTATC+AGG | 0.456108 | 3.3:+69296189 | None:intergenic |
CAACTCAAAACACTCAAATC+AGG | 0.456687 | 3.3:+69292246 | None:intergenic |
GTAGGTGAAGAATGATGTTT+AGG | 0.458364 | 3.3:+69296216 | None:intergenic |
TGGACGAGACATTTCAAAGC+TGG | 0.461650 | 3.3:-69296389 | MS.gene73913:CDS |
TGCCTTGTCCCATTGATCTC+CGG | 0.462338 | 3.3:+69296446 | None:intergenic |
CCTCTATGATGAACATGTCT+TGG | 0.462506 | 3.3:+69291262 | None:intergenic |
CATGTACTCATCAAAGTAAC+CGG | 0.462682 | 3.3:+69292371 | None:intergenic |
ATTTCCTTAACAAGCACAAC+AGG | 0.462832 | 3.3:-69291037 | MS.gene73913:CDS |
ACCCCATTTAATGAGTTCTC+TGG | 0.464185 | 3.3:+69293085 | None:intergenic |
TGAGTCACAAGGCATTGAAA+TGG | 0.465887 | 3.3:-69296305 | MS.gene73913:CDS |
TATTAACAAAATTTATGCTC+AGG | 0.465959 | 3.3:-69293021 | MS.gene73913:intron |
AAAGGCATTTGCAACCTCTC+AGG | 0.468135 | 3.3:-69291798 | MS.gene73913:intron |
CTGCAATGTTGCTTCTAACA+AGG | 0.469739 | 3.3:-69292206 | MS.gene73913:CDS |
CATGCATTCAAGGAATCAAT+GGG | 0.471241 | 3.3:-69296529 | MS.gene73913:CDS |
AGTACATGTGGGGTGGTGCT+TGG | 0.473838 | 3.3:-69292356 | MS.gene73913:CDS |
ATACCATCCAGGTACACCTT+TGG | 0.474254 | 3.3:+69291853 | None:intergenic |
TAAACAGATGGATTACATCA+TGG | 0.476747 | 3.3:-69291335 | MS.gene73913:intron |
CCAGCCGCACCGGAGATCAA+TGG | 0.478807 | 3.3:-69296455 | MS.gene73913:CDS |
CATGGTTTCCAAGGAGGTGG+TGG | 0.493242 | 3.3:+69290950 | None:intergenic |
GTTGGTGGTTATTATGATGC+AGG | 0.495040 | 3.3:-69293215 | MS.gene73913:CDS |
TACTAAGCATATCCTCATAA+GGG | 0.496207 | 3.3:+69292157 | None:intergenic |
ATGGAAGCCAAAGGTGTACC+TGG | 0.501098 | 3.3:-69291860 | MS.gene73913:CDS |
TTGAATAAGCAGCATCGTCT+AGG | 0.501483 | 3.3:+69292502 | None:intergenic |
CCTGCATTTCCAGCTAAAGT+TGG | 0.502786 | 3.3:+69291076 | None:intergenic |
CCTTCCTATCATCATTGCCA+AGG | 0.506351 | 3.3:-69296244 | MS.gene73913:CDS |
GGCGATGAGACCAGCCGCAC+CGG | 0.506587 | 3.3:-69296465 | MS.gene73913:CDS |
ATTACTCATGTGCTGGTGGT+TGG | 0.507578 | 3.3:-69291213 | MS.gene73913:CDS |
CCAACAACGACTGTATTTGA+AGG | 0.513357 | 3.3:-69292579 | MS.gene73913:CDS |
CCAAGACATGTTCATCATAG+AGG | 0.514706 | 3.3:-69291262 | MS.gene73913:CDS |
TGAAATTCATGTTAGGTTGG+TGG | 0.514876 | 3.3:-69292675 | MS.gene73913:intron |
ATGGGATGCAGAACTGTTGA+AGG | 0.514883 | 3.3:+69293043 | None:intergenic |
CCAACTTTAGCTGGAAATGC+AGG | 0.519047 | 3.3:-69291076 | MS.gene73913:CDS |
CAGCAATAGTGAAGTGCCAT+CGG | 0.520237 | 3.3:-69296487 | MS.gene73913:CDS |
TTCAAAGCTGGATTCTTGAA+AGG | 0.521917 | 3.3:-69296377 | MS.gene73913:CDS |
GTTAGAAGCAACATTGCAGC+AGG | 0.524873 | 3.3:+69292210 | None:intergenic |
ATGAACATGAGCTACATAGT+AGG | 0.525898 | 3.3:-69291301 | MS.gene73913:CDS |
TTGGTGGTTATTATGATGCA+GGG | 0.526131 | 3.3:-69293214 | MS.gene73913:CDS |
GCATCCAAAATCCACATACT+TGG | 0.535254 | 3.3:+69296335 | None:intergenic |
AAGGCAGCGTTGCTTGATCA+TGG | 0.538698 | 3.3:-69296429 | MS.gene73913:CDS |
AGCAATAGTGAAGTGCCATC+GGG | 0.538979 | 3.3:-69296486 | MS.gene73913:CDS |
GGAAACTCAGGTTTACAAGA+TGG | 0.542335 | 3.3:-69293266 | MS.gene73913:CDS |
AGGCTTCATATAAAATGCCT+TGG | 0.543329 | 3.3:+69292266 | None:intergenic |
ATTAGTTGCCAAGGAAATGT+AGG | 0.544392 | 3.3:+69292308 | None:intergenic |
CATGTGCTGGTGGTTGGAAG+TGG | 0.548316 | 3.3:-69291207 | MS.gene73913:CDS |
AAACAGATGGATTACATCAT+GGG | 0.556675 | 3.3:-69291334 | MS.gene73913:intron |
AACATTACAGGAGCAATGGT+TGG | 0.556744 | 3.3:-69291157 | MS.gene73913:CDS |
GAATGATATCATGGTTTCCA+AGG | 0.560598 | 3.3:+69290941 | None:intergenic |
TAGGTTGGTGGATCACTGAA+TGG | 0.562722 | 3.3:-69292663 | MS.gene73913:CDS |
GTGTAATTATCAGGTGGTGT+AGG | 0.566017 | 3.3:+69296198 | None:intergenic |
CACCGGAGATCAATGGGACA+AGG | 0.566153 | 3.3:-69296448 | MS.gene73913:CDS |
TTAACAAGCACAACAGGTAG+TGG | 0.568632 | 3.3:-69291031 | MS.gene73913:CDS |
CGGCTGGTCTCATCGCCCGA+TGG | 0.570578 | 3.3:+69296471 | None:intergenic |
GAAGAAGAAGACCAAGTATG+TGG | 0.572331 | 3.3:-69296346 | MS.gene73913:CDS |
CCTTGGCAATGATGATAGGA+AGG | 0.574607 | 3.3:+69296244 | None:intergenic |
GCTGATTATATGGAAGCCAA+AGG | 0.576136 | 3.3:-69291869 | MS.gene73913:CDS |
GTTACTTTGATGAGTACATG+TGG | 0.577224 | 3.3:-69292368 | MS.gene73913:CDS |
ATTTCATGGAGAGGAAACTC+AGG | 0.579198 | 3.3:-69293278 | MS.gene73913:CDS |
CATTGTCATAGCAAAAGACA+TGG | 0.581404 | 3.3:+69293169 | None:intergenic |
GGGAGATTGCCAAAGAGCAA+TGG | 0.582582 | 3.3:-69293302 | MS.gene73913:CDS |
CACATCAGGATTAGTTGCCA+AGG | 0.583526 | 3.3:+69292299 | None:intergenic |
ATGATGTTTAGGCAAAACCT+TGG | 0.586680 | 3.3:+69296227 | None:intergenic |
CTGCTGCCATTTCTCCTGCA+AGG | 0.587328 | 3.3:+69292550 | None:intergenic |
AAGCCAAAGGTGTACCTGGA+TGG | 0.590814 | 3.3:-69291856 | MS.gene73913:CDS |
TGCAATGTTGCTTCTAACAA+GGG | 0.591784 | 3.3:-69292205 | MS.gene73913:CDS |
CACCAGATGATCACTACTGT+TGG | 0.591909 | 3.3:-69292632 | MS.gene73913:CDS |
TATCATGGTTTCCAAGGAGG+TGG | 0.593765 | 3.3:+69290947 | None:intergenic |
ATTACAGGAGCAATGGTTGG+AGG | 0.593896 | 3.3:-69291154 | MS.gene73913:CDS |
AGCAATGGAATTTCATGGAG+AGG | 0.597124 | 3.3:-69293287 | MS.gene73913:CDS |
ACGACATATTGGAGAGATTG+TGG | 0.598012 | 3.3:+69291920 | None:intergenic |
TAACAACATTACAGGAGCAA+TGG | 0.606000 | 3.3:-69291161 | MS.gene73913:CDS |
ATATCCTCATAAGGGTAACC+AGG | 0.610242 | 3.3:+69292165 | None:intergenic |
TATTCAAAGAAACTCGTCAA+GGG | 0.616213 | 3.3:-69292486 | MS.gene73913:CDS |
AAAGTCTCTTGCAAATGCAA+AGG | 0.621930 | 3.3:+69292452 | None:intergenic |
GTAGCGCTTTGTGAAGAGCA+AGG | 0.623041 | 3.3:+69296175 | None:intergenic |
GGAGAGATTGTGGTTGTCCG+TGG | 0.623521 | 3.3:+69291930 | None:intergenic |
TAGCGCTTTGTGAAGAGCAA+GGG | 0.623820 | 3.3:+69296176 | None:intergenic |
CATTCAAGGAATCAATGGGG+AGG | 0.631381 | 3.3:-69296525 | MS.gene73913:CDS |
GATCATGGTAATCGACGTGA+GGG | 0.635900 | 3.3:-69296414 | MS.gene73913:CDS |
TTAGGACCACAATACCATCC+AGG | 0.636584 | 3.3:+69291842 | None:intergenic |
GGTGTACCTGGATGGTATTG+TGG | 0.638072 | 3.3:-69291848 | MS.gene73913:CDS |
TGATCATGGTAATCGACGTG+AGG | 0.639459 | 3.3:-69296415 | MS.gene73913:CDS |
TGATATCATGGTTTCCAAGG+AGG | 0.640965 | 3.3:+69290944 | None:intergenic |
ATTCAAGGAATCAATGGGGA+GGG | 0.642541 | 3.3:-69296524 | MS.gene73913:CDS |
TTATTCAAAGAAACTCGTCA+AGG | 0.644851 | 3.3:-69292487 | MS.gene73913:CDS |
TTTGATGAGTACATGTGGGG+TGG | 0.652316 | 3.3:-69292363 | MS.gene73913:CDS |
TGATGTGCCTAAGAATGCCA+AGG | 0.657170 | 3.3:-69292283 | MS.gene73913:CDS |
TGACAAATTTGGTACCTGAG+AGG | 0.667859 | 3.3:+69291784 | None:intergenic |
TACTTTGATGAGTACATGTG+GGG | 0.670908 | 3.3:-69292366 | MS.gene73913:CDS |
GCCAGAGAACTCATTAAATG+GGG | 0.671647 | 3.3:-69293086 | MS.gene73913:CDS |
ATTGTCATAGCAAAAGACAT+GGG | 0.674505 | 3.3:+69293170 | None:intergenic |
ATGCATCGTGTTGAGTCACA+AGG | 0.674798 | 3.3:-69296316 | MS.gene73913:CDS |
TTGATGAAGATAAGAGCACA+TGG | 0.677233 | 3.3:+69292110 | None:intergenic |
AAAAGATCAACATACAGTCG+CGG | 0.678960 | 3.3:-69292426 | MS.gene73913:CDS |
GCAAGGGTGTAATTATCAGG+TGG | 0.684686 | 3.3:+69296192 | None:intergenic |
AATGTAGGTAGTATTTCCAG+TGG | 0.704279 | 3.3:+69292323 | None:intergenic |
TTACTTTGATGAGTACATGT+GGG | 0.709906 | 3.3:-69292367 | MS.gene73913:CDS |
TGGTGGTTATTATGATGCAG+GGG | 0.711733 | 3.3:-69293213 | MS.gene73913:CDS |
TGTCCCATTGATCTCCGGTG+CGG | 0.718263 | 3.3:+69296451 | None:intergenic |
GGGTTGATACAATTGAACCA+CGG | 0.746869 | 3.3:-69291947 | MS.gene73913:CDS |
ATGCATTCAAGGAATCAATG+GGG | 0.776623 | 3.3:-69296528 | MS.gene73913:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTATAATAATAAAATAATA+AGG | - | chr3.3:69292518-69292537 | MS.gene73913:CDS | 0.0% |
!! | AATAAATCAAATAAAATCAT+GGG | + | chr3.3:69291467-69291486 | None:intergenic | 10.0% |
!! | TAATAAATCAAATAAAATCA+TGG | + | chr3.3:69291468-69291487 | None:intergenic | 10.0% |
!! | TATTATATATTGTATTTCAT+TGG | + | chr3.3:69292079-69292098 | None:intergenic | 10.0% |
!!! | AATTAAACTTTACTTTTTTT+TGG | - | chr3.3:69291833-69291852 | MS.gene73913:CDS | 10.0% |
!!! | ATATTCATATTTTTTTTTGA+AGG | - | chr3.3:69292225-69292244 | MS.gene73913:CDS | 10.0% |
!!! | GTTTTTCATTTATAATATTA+AGG | + | chr3.3:69292037-69292056 | None:intergenic | 10.0% |
!!! | TAGTTAAAATATGTTTTTTT+GGG | + | chr3.3:69292347-69292366 | None:intergenic | 10.0% |
!!! | TTAGTTAAAATATGTTTTTT+TGG | + | chr3.3:69292348-69292367 | None:intergenic | 10.0% |
!! | AAATAAAAAATGATATCAAC+AGG | - | chr3.3:69292967-69292986 | MS.gene73913:intron | 15.0% |
!! | AAATAAATAAATTCTACAGA+AGG | + | chr3.3:69292127-69292146 | None:intergenic | 15.0% |
!! | AAATTTGCATTATATATTCA+AGG | + | chr3.3:69291930-69291949 | None:intergenic | 15.0% |
!! | AATTTGCATTATATATTCAA+GGG | + | chr3.3:69291929-69291948 | None:intergenic | 15.0% |
!! | CTAGTATAAAAAAAATGAAA+AGG | + | chr3.3:69292805-69292824 | None:intergenic | 15.0% |
!! | TGAATATAAACAAAAATACA+TGG | - | chr3.3:69294348-69294367 | MS.gene73913:intron | 15.0% |
!! | TTATAACCAAAATTAATAGA+AGG | + | chr3.3:69293177-69293196 | None:intergenic | 15.0% |
!! | TTTGAAAGAAAAAAAAAACA+AGG | + | chr3.3:69295447-69295466 | None:intergenic | 15.0% |
!!! | AACCAATTAAATTTGTTATT+TGG | - | chr3.3:69293364-69293383 | MS.gene73913:intron | 15.0% |
!!! | AATTTATCTCTTTTTTTTGT+TGG | - | chr3.3:69293665-69293684 | MS.gene73913:intron | 15.0% |
!!! | AGCATAAATTTTGTTAATAT+GGG | + | chr3.3:69294455-69294474 | None:intergenic | 15.0% |
!!! | AGTTAAAATATGTTTTTTTG+GGG | + | chr3.3:69292346-69292365 | None:intergenic | 15.0% |
!!! | ATACACTCAATATATTTTTT+AGG | - | chr3.3:69291496-69291515 | MS.gene73913:intron | 15.0% |
!!! | ATATTTGTTTTCTTACAAAA+GGG | - | chr3.3:69292260-69292279 | MS.gene73913:CDS | 15.0% |
!!! | ATGATTCAAATTATTTTTGT+AGG | + | chr3.3:69294038-69294057 | None:intergenic | 15.0% |
!!! | CTCTATTTTTATTTATTCTA+AGG | + | chr3.3:69291558-69291577 | None:intergenic | 15.0% |
!!! | TTGTTATTAGCAAAAATTAA+TGG | + | chr3.3:69293254-69293273 | None:intergenic | 15.0% |
!! | AAATAAGAATGGAATGAAAA+CGG | + | chr3.3:69293056-69293075 | None:intergenic | 20.0% |
!! | AATATCATAGATCATCTTAA+AGG | - | chr3.3:69291764-69291783 | MS.gene73913:intron | 20.0% |
!! | AATTCATTTCATGTCATAAA+AGG | + | chr3.3:69293789-69293808 | None:intergenic | 20.0% |
!! | CATTATTGAGATCATAAATT+TGG | - | chr3.3:69294760-69294779 | MS.gene73913:intron | 20.0% |
!! | GATAATAATTTACCTTTATG+GGG | - | chr3.3:69291872-69291891 | MS.gene73913:CDS | 20.0% |
!! | GATTAATTACGTTTAGTAAA+TGG | - | chr3.3:69295828-69295847 | MS.gene73913:intron | 20.0% |
!! | GGATAATAATTTACCTTTAT+GGG | - | chr3.3:69291871-69291890 | MS.gene73913:CDS | 20.0% |
!! | TATGGGATGAAATTATTTAA+AGG | + | chr3.3:69292932-69292951 | None:intergenic | 20.0% |
!! | TATTAACAAAATTTATGCTC+AGG | - | chr3.3:69294456-69294475 | MS.gene73913:intron | 20.0% |
!! | TCAAAATGATATGACAAATT+TGG | + | chr3.3:69295707-69295726 | None:intergenic | 20.0% |
!! | TGCAATTATCATCTTATTAA+AGG | + | chr3.3:69293984-69294003 | None:intergenic | 20.0% |
!! | TGGATAATAATTTACCTTTA+TGG | - | chr3.3:69291870-69291889 | MS.gene73913:CDS | 20.0% |
!! | TTAACATCTTTATTAACTAG+AGG | + | chr3.3:69291674-69291693 | None:intergenic | 20.0% |
!! | TTATAAAAAGGTTCAATGTA+AGG | + | chr3.3:69295081-69295100 | None:intergenic | 20.0% |
!! | TTATATTTCCATTAAACAGA+TGG | - | chr3.3:69296130-69296149 | MS.gene73913:intron | 20.0% |
!!! | ACTATTTTTTGGACAAAATA+AGG | + | chr3.3:69293485-69293504 | None:intergenic | 20.0% |
!!! | ATTAGTCCTTCTATTAATTT+TGG | - | chr3.3:69293168-69293187 | MS.gene73913:CDS | 20.0% |
!!! | ATTATTCACTTGCTATATTA+TGG | - | chr3.3:69291708-69291727 | MS.gene73913:intron | 20.0% |
!!! | CAATTAAATTTGTTATTTGG+CGG | - | chr3.3:69293367-69293386 | MS.gene73913:intron | 20.0% |
!!! | CATATTTGTTTTCTTACAAA+AGG | - | chr3.3:69292259-69292278 | MS.gene73913:CDS | 20.0% |
!!! | CTAGTAAATTTTTAAACATG+TGG | + | chr3.3:69294007-69294026 | None:intergenic | 20.0% |
!!! | CTATTTTTTGGACAAAATAA+GGG | + | chr3.3:69293484-69293503 | None:intergenic | 20.0% |
!!! | GAGCATAAATTTTGTTAATA+TGG | + | chr3.3:69294456-69294475 | None:intergenic | 20.0% |
!!! | TTTAGTTTTCTAGTTATTGT+TGG | - | chr3.3:69293618-69293637 | MS.gene73913:intron | 20.0% |
! | AAAAAATGATATCAACAGGA+CGG | - | chr3.3:69292971-69292990 | MS.gene73913:intron | 25.0% |
! | AAAGACACTGATGATAAAAA+AGG | - | chr3.3:69294235-69294254 | MS.gene73913:intron | 25.0% |
! | AAAGTGTAAGTGGAAAATTA+TGG | - | chr3.3:69294074-69294093 | MS.gene73913:intron | 25.0% |
! | AATAAGAATGGAATGAAAAC+GGG | + | chr3.3:69293055-69293074 | None:intergenic | 25.0% |
! | ACAGATATTGGAAAGAAATT+AGG | + | chr3.3:69295656-69295675 | None:intergenic | 25.0% |
! | AGCATTTGGCAATAATAAAA+TGG | + | chr3.3:69292871-69292890 | None:intergenic | 25.0% |
! | ATAAACAATTTGGATGTGTT+TGG | - | chr3.3:69292433-69292452 | MS.gene73913:CDS | 25.0% |
! | ATCAATTCAATGTCTTCAAT+TGG | - | chr3.3:69295385-69295404 | MS.gene73913:intron | 25.0% |
! | ATCGTGAAACAAAATAAGAA+TGG | + | chr3.3:69293067-69293086 | None:intergenic | 25.0% |
! | CATCATAAACTTAACTCAAT+TGG | + | chr3.3:69291957-69291976 | None:intergenic | 25.0% |
! | CGCCAAATAACAAATTTAAT+TGG | + | chr3.3:69293369-69293388 | None:intergenic | 25.0% |
! | CTAATAACAACAAAATTGAG+AGG | - | chr3.3:69293264-69293283 | MS.gene73913:CDS | 25.0% |
! | GTTAACACAGTTTAAATAAG+TGG | + | chr3.3:69296029-69296048 | None:intergenic | 25.0% |
! | TATACGTGAGATAAACAATT+TGG | - | chr3.3:69292423-69292442 | MS.gene73913:CDS | 25.0% |
! | TATTAAGGGTAATCGTATTT+AGG | + | chr3.3:69292022-69292041 | None:intergenic | 25.0% |
! | TGAAAATGTTCAGATTTAGT+TGG | - | chr3.3:69293228-69293247 | MS.gene73913:CDS | 25.0% |
! | TGAAATTGGTCAAAACTATT+TGG | + | chr3.3:69296350-69296369 | None:intergenic | 25.0% |
!! | AAAGCAAACAACATTTTGAA+AGG | + | chr3.3:69291587-69291606 | None:intergenic | 25.0% |
!! | AACTTCATTAAACAGGATTT+TGG | - | chr3.3:69295894-69295913 | MS.gene73913:intron | 25.0% |
!! | ATACATCTGAAATTCATGTT+AGG | - | chr3.3:69294795-69294814 | MS.gene73913:intron | 25.0% |
!! | ATGCATATATGCTTTTGAAT+AGG | - | chr3.3:69291610-69291629 | MS.gene73913:intron | 25.0% |
!! | ATGTATCGTTCCAATTTTAT+CGG | + | chr3.3:69293562-69293581 | None:intergenic | 25.0% |
!! | GAGTAATTTTTGTGATCATT+TGG | + | chr3.3:69296251-69296270 | None:intergenic | 25.0% |
!! | TTTGTAGGTTTTTGTGTAAT+TGG | - | chr3.3:69291210-69291229 | MS.gene73913:CDS | 25.0% |
!! | TTTTCCTTGAATCATGAAAT+TGG | + | chr3.3:69296364-69296383 | None:intergenic | 25.0% |
!! | TTTTGGATCAAGTAGTTTAA+TGG | - | chr3.3:69291850-69291869 | MS.gene73913:CDS | 25.0% |
!!! | AAGCAAACAACATTTTGAAA+GGG | + | chr3.3:69291586-69291605 | None:intergenic | 25.0% |
!!! | ATTTTTGGTACAATCTTTGT+AGG | - | chr3.3:69291195-69291214 | MS.gene73913:CDS | 25.0% |
!!! | GCGATGTATTAACTATTTTT+TGG | + | chr3.3:69293496-69293515 | None:intergenic | 25.0% |
!!! | TATTTAAGCACTGAGAATTA+TGG | + | chr3.3:69295922-69295941 | None:intergenic | 25.0% |
!!! | TTCTCTTTTTGCTGATTATA+TGG | - | chr3.3:69295598-69295617 | MS.gene73913:intron | 25.0% |
AAAAGACCTTAGATAGCATT+TGG | + | chr3.3:69292885-69292904 | None:intergenic | 30.0% | |
AAAGTGCATTTGTAAGATGA+TGG | + | chr3.3:69292616-69292635 | None:intergenic | 30.0% | |
AAATACTACCTACATTTCCT+TGG | - | chr3.3:69295161-69295180 | MS.gene73913:intron | 30.0% | |
AATGTCTTCAATTGGACTAA+AGG | - | chr3.3:69295393-69295412 | MS.gene73913:intron | 30.0% | |
ATACTAAGCATATCCTCATA+AGG | + | chr3.3:69295324-69295343 | None:intergenic | 30.0% | |
ATGCTAACATGAAAATTTGC+AGG | - | chr3.3:69295506-69295525 | MS.gene73913:intron | 30.0% | |
ATTGTCATAGCAAAAGACAT+GGG | + | chr3.3:69294310-69294329 | None:intergenic | 30.0% | |
ATTTCAGATGTATTGCTCTT+AGG | + | chr3.3:69294788-69294807 | None:intergenic | 30.0% | |
CAAACGTAACTTCATTAAAC+AGG | - | chr3.3:69295887-69295906 | MS.gene73913:intron | 30.0% | |
CATGGATATTTGATATGTTG+TGG | + | chr3.3:69293763-69293782 | None:intergenic | 30.0% | |
CTGTAATGTTGTTAGGATTT+CGG | + | chr3.3:69296310-69296329 | None:intergenic | 30.0% | |
CTTTCCAATATCTGTTCTAA+AGG | - | chr3.3:69295661-69295680 | MS.gene73913:intron | 30.0% | |
GAGGTAATGATGTGTAATTA+AGG | - | chr3.3:69293399-69293418 | MS.gene73913:intron | 30.0% | |
GATGATAAAAAAGGACTTGT+TGG | - | chr3.3:69294244-69294263 | MS.gene73913:intron | 30.0% | |
GATGTAATCCATCTGTTTAA+TGG | + | chr3.3:69296141-69296160 | None:intergenic | 30.0% | |
GCGAAAGTTGGAATATTTAA+GGG | + | chr3.3:69294598-69294617 | None:intergenic | 30.0% | |
GTAATGGCAAAGACTAAAAT+TGG | + | chr3.3:69294677-69294696 | None:intergenic | 30.0% | |
GTTTAATGAAGTTACGTTTG+TGG | + | chr3.3:69295887-69295906 | None:intergenic | 30.0% | |
TAACCGGATGAGTTATAAAA+AGG | + | chr3.3:69295093-69295112 | None:intergenic | 30.0% | |
TACTAAGCATATCCTCATAA+GGG | + | chr3.3:69295323-69295342 | None:intergenic | 30.0% | |
TATTCAAAGAAACTCGTCAA+GGG | - | chr3.3:69294991-69295010 | MS.gene73913:intron | 30.0% | |
TATTTGATATGTTGTGGTGT+AGG | + | chr3.3:69293757-69293776 | None:intergenic | 30.0% | |
TGCATTATATATTCAAGGGT+CGG | + | chr3.3:69291925-69291944 | None:intergenic | 30.0% | |
TGCATTATTCTGTTCTCATT+TGG | - | chr3.3:69291412-69291431 | MS.gene73913:intron | 30.0% | |
TGCGAAAGTTGGAATATTTA+AGG | + | chr3.3:69294599-69294618 | None:intergenic | 30.0% | |
TGCTAACATGAAAATTTGCA+GGG | - | chr3.3:69295507-69295526 | MS.gene73913:intron | 30.0% | |
TGGTAAGACTAGTAACATTA+TGG | + | chr3.3:69295350-69295369 | None:intergenic | 30.0% | |
TTACTTTGATGAGTACATGT+GGG | - | chr3.3:69295110-69295129 | MS.gene73913:intron | 30.0% | |
TTATTCAAAGAAACTCGTCA+AGG | - | chr3.3:69294990-69295009 | MS.gene73913:intron | 30.0% | |
TTATTCTGTTCTCATTTGGT+TGG | - | chr3.3:69291416-69291435 | MS.gene73913:intron | 30.0% | |
TTATTGCCAAATGCTATCTA+AGG | - | chr3.3:69292876-69292895 | MS.gene73913:intron | 30.0% | |
TTGAAAGAGTCAAGAACTAT+GGG | + | chr3.3:69292949-69292968 | None:intergenic | 30.0% | |
TTGACCAATTTCATGATTCA+AGG | - | chr3.3:69296357-69296376 | MS.gene73913:CDS | 30.0% | |
TTTCAGTTTATTCCCCATAA+AGG | + | chr3.3:69291887-69291906 | None:intergenic | 30.0% | |
TTTGAAAGAGTCAAGAACTA+TGG | + | chr3.3:69292950-69292969 | None:intergenic | 30.0% | |
! | AACACACGCTTTATATGTTT+TGG | - | chr3.3:69293087-69293106 | MS.gene73913:CDS | 30.0% |
! | ATCTGAAATTCATGTTAGGT+TGG | - | chr3.3:69294799-69294818 | MS.gene73913:intron | 30.0% |
! | GAACCTTTTTATAACTCATC+CGG | - | chr3.3:69295087-69295106 | MS.gene73913:intron | 30.0% |
! | TGTGCTTGTTAAGGAAATTA+AGG | + | chr3.3:69296438-69296457 | None:intergenic | 30.0% |
! | TTGGTCTTCTTCTTCATATT+TGG | + | chr3.3:69291126-69291145 | None:intergenic | 30.0% |
! | TTTTCCAAAAAAACAGCAGA+AGG | - | chr3.3:69293898-69293917 | MS.gene73913:intron | 30.0% |
!! | AAACAGATGGATTACATCAT+GGG | - | chr3.3:69296143-69296162 | MS.gene73913:intron | 30.0% |
!! | AATGCCTTTAGAACAGATAT+TGG | + | chr3.3:69295668-69295687 | None:intergenic | 30.0% |
!! | ATCCTTTACTTTTCAACACT+TGG | + | chr3.3:69293722-69293741 | None:intergenic | 30.0% |
!! | ATTTGTGACAACTTTTGAAG+CGG | + | chr3.3:69296051-69296070 | None:intergenic | 30.0% |
!! | TAAACAGATGGATTACATCA+TGG | - | chr3.3:69296142-69296161 | MS.gene73913:intron | 30.0% |
!! | TACCAAGTGTTGAAAAGTAA+AGG | - | chr3.3:69293717-69293736 | MS.gene73913:intron | 30.0% |
!! | TTACTTTGATTTGTGAAGCT+GGG | - | chr3.3:69294155-69294174 | MS.gene73913:intron | 30.0% |
!! | TTTAGCAACAACTTTTGAAG+TGG | - | chr3.3:69295785-69295804 | MS.gene73913:intron | 30.0% |
!!! | AAGGCATTGAAATGGATTTT+TGG | - | chr3.3:69291180-69291199 | MS.gene73913:CDS | 30.0% |
AAAAATTACTCATGTGCTGG+TGG | - | chr3.3:69296260-69296279 | MS.gene73913:CDS | 35.0% | |
AAAACCTTGGCAATGATGAT+AGG | + | chr3.3:69291240-69291259 | None:intergenic | 35.0% | |
AAAAGATCAACATACAGTCG+CGG | - | chr3.3:69295051-69295070 | MS.gene73913:intron | 35.0% | |
AAAGTCTCTTGCAAATGCAA+AGG | + | chr3.3:69295028-69295047 | None:intergenic | 35.0% | |
AACTTTCGCATACAATCTCA+AGG | - | chr3.3:69294609-69294628 | MS.gene73913:intron | 35.0% | |
AATACGCGACTTCTTCAATA+GGG | + | chr3.3:69294543-69294562 | None:intergenic | 35.0% | |
AATATACCCCTGAAAATGAG+TGG | + | chr3.3:69295979-69295998 | None:intergenic | 35.0% | |
AATGTAGGTAGTATTTCCAG+TGG | + | chr3.3:69295157-69295176 | None:intergenic | 35.0% | |
ACTATGTAGCTCATGTTCAT+TGG | + | chr3.3:69296176-69296195 | None:intergenic | 35.0% | |
AGGCTTCATATAAAATGCCT+TGG | + | chr3.3:69295214-69295233 | None:intergenic | 35.0% | |
AGTGGTATACCATAATTCTC+AGG | + | chr3.3:69295961-69295980 | None:intergenic | 35.0% | |
AGTTGAACACCTGAGAATTA+TGG | - | chr3.3:69295949-69295968 | MS.gene73913:intron | 35.0% | |
ATGAACATGAGCTACATAGT+AGG | - | chr3.3:69296176-69296195 | MS.gene73913:CDS | 35.0% | |
ATGAGCTACATAGTAGGATA+TGG | - | chr3.3:69296182-69296201 | MS.gene73913:CDS | 35.0% | |
ATGATGTTTAGGCAAAACCT+TGG | + | chr3.3:69291253-69291272 | None:intergenic | 35.0% | |
ATGCATTCAAGGAATCAATG+GGG | - | chr3.3:69290949-69290968 | MS.gene73913:CDS | 35.0% | |
ATGCCAGAGAACTCATTAAA+TGG | - | chr3.3:69294389-69294408 | MS.gene73913:intron | 35.0% | |
ATGTTGTTAGGATTTCGGTT+AGG | + | chr3.3:69296305-69296324 | None:intergenic | 35.0% | |
ATTAGTTGCCAAGGAAATGT+AGG | + | chr3.3:69295172-69295191 | None:intergenic | 35.0% | |
ATTGCTCCTGTAATGTTGTT+AGG | + | chr3.3:69296317-69296336 | None:intergenic | 35.0% | |
ATTTCCTTAACAAGCACAAC+AGG | - | chr3.3:69296440-69296459 | MS.gene73913:CDS | 35.0% | |
CAAAGAGCAATGGAATTTCA+TGG | - | chr3.3:69294185-69294204 | MS.gene73913:intron | 35.0% | |
CACAAAAATTACTCATGTGC+TGG | - | chr3.3:69296257-69296276 | MS.gene73913:CDS | 35.0% | |
CATGAAATTCCATTGCTCTT+TGG | + | chr3.3:69294187-69294206 | None:intergenic | 35.0% | |
CATGTACTCATCAAAGTAAC+CGG | + | chr3.3:69295109-69295128 | None:intergenic | 35.0% | |
CATTGTCATAGCAAAAGACA+TGG | + | chr3.3:69294311-69294330 | None:intergenic | 35.0% | |
CGAAATCCTAACAACATTAC+AGG | - | chr3.3:69296308-69296327 | MS.gene73913:CDS | 35.0% | |
CTAACATGAAAATTTGCAGG+GGG | - | chr3.3:69295509-69295528 | MS.gene73913:intron | 35.0% | |
CTTCAAATACAGTCGTTGTT+GGG | + | chr3.3:69294900-69294919 | None:intergenic | 35.0% | |
GCATTATATATTCAAGGGTC+GGG | + | chr3.3:69291924-69291943 | None:intergenic | 35.0% | |
GCTAACATGAAAATTTGCAG+GGG | - | chr3.3:69295508-69295527 | MS.gene73913:intron | 35.0% | |
GGATAGTTGTATTTGATCGA+AGG | + | chr3.3:69292001-69292020 | None:intergenic | 35.0% | |
GTAGGTGAAGAATGATGTTT+AGG | + | chr3.3:69291264-69291283 | None:intergenic | 35.0% | |
GTTAGGATGTTTCTTAATCC+TGG | - | chr3.3:69295294-69295313 | MS.gene73913:intron | 35.0% | |
TAAAATGCCTTGGCATTCTT+AGG | + | chr3.3:69295204-69295223 | None:intergenic | 35.0% | |
TAACAACATTACAGGAGCAA+TGG | - | chr3.3:69296316-69296335 | MS.gene73913:CDS | 35.0% | |
TAACATGAAAATTTGCAGGG+GGG | - | chr3.3:69295510-69295529 | MS.gene73913:intron | 35.0% | |
TACTTTGATGAGTACATGTG+GGG | - | chr3.3:69295111-69295130 | MS.gene73913:intron | 35.0% | |
TAGACACAAAATCTCCTAAG+CGG | + | chr3.3:69292698-69292717 | None:intergenic | 35.0% | |
TAGCAAAAGACATGGGAAAA+TGG | + | chr3.3:69294303-69294322 | None:intergenic | 35.0% | |
TATACTGAACCAACTTTAGC+TGG | - | chr3.3:69296392-69296411 | MS.gene73913:CDS | 35.0% | |
TCATGTCATAAAAGGTTGCA+TGG | + | chr3.3:69293781-69293800 | None:intergenic | 35.0% | |
TCTTGTGAGTAAAGTGTAAG+TGG | - | chr3.3:69294064-69294083 | MS.gene73913:intron | 35.0% | |
TGCCAGAGAACTCATTAAAT+GGG | - | chr3.3:69294390-69294409 | MS.gene73913:intron | 35.0% | |
TGGTGGAATAGCTTCAAAAA+TGG | + | chr3.3:69296486-69296505 | None:intergenic | 35.0% | |
TGTTGTTAGGATTTCGGTTA+GGG | + | chr3.3:69296304-69296323 | None:intergenic | 35.0% | |
TTCAAAGCTGGATTCTTGAA+AGG | - | chr3.3:69291100-69291119 | MS.gene73913:CDS | 35.0% | |
TTGAGATTGTATGCGAAAGT+TGG | + | chr3.3:69294610-69294629 | None:intergenic | 35.0% | |
TTGCTATGACAATGCTAAGT+TGG | - | chr3.3:69294317-69294336 | MS.gene73913:intron | 35.0% | |
TTGTGTGGCTAGTATTTGAA+TGG | - | chr3.3:69293017-69293036 | MS.gene73913:intron | 35.0% | |
TTTCCATAAGCACAGTTTCA+GGG | + | chr3.3:69292673-69292692 | None:intergenic | 35.0% | |
TTTGCATTTGCAAGAGACTT+TGG | - | chr3.3:69295027-69295046 | MS.gene73913:intron | 35.0% | |
! | AAGACCAAGTATGTGGATTT+TGG | - | chr3.3:69291138-69291157 | MS.gene73913:CDS | 35.0% |
! | ATGGTATACCACTCATTTTC+AGG | - | chr3.3:69295968-69295987 | MS.gene73913:intron | 35.0% |
! | GTTACTTTGATGAGTACATG+TGG | - | chr3.3:69295109-69295128 | MS.gene73913:intron | 35.0% |
! | TATATGCTTTTGAATAGGCG+TGG | - | chr3.3:69291615-69291634 | MS.gene73913:intron | 35.0% |
! | TGCAATGTTGCTTCTAACAA+GGG | - | chr3.3:69295272-69295291 | MS.gene73913:intron | 35.0% |
! | TGGTATACCACTCATTTTCA+GGG | - | chr3.3:69295969-69295988 | MS.gene73913:intron | 35.0% |
! | TGTTATTTGGCGGAAATCAA+GGG | - | chr3.3:69293377-69293396 | MS.gene73913:intron | 35.0% |
! | TTGATGAAGATAAGAGCACA+TGG | + | chr3.3:69295370-69295389 | None:intergenic | 35.0% |
! | TTGGTGGTTATTATGATGCA+GGG | - | chr3.3:69294263-69294282 | MS.gene73913:intron | 35.0% |
! | TTTGAAGCTATTCCACCATT+TGG | - | chr3.3:69296488-69296507 | MS.gene73913:CDS | 35.0% |
! | TTTTCCATAAGCACAGTTTC+AGG | + | chr3.3:69292674-69292693 | None:intergenic | 35.0% |
!! | GATAAAAAAGGACTTGTTGG+TGG | - | chr3.3:69294247-69294266 | MS.gene73913:intron | 35.0% |
!! | GTTACTTTGATTTGTGAAGC+TGG | - | chr3.3:69294154-69294173 | MS.gene73913:intron | 35.0% |
!! | TGAAATTCATGTTAGGTTGG+TGG | - | chr3.3:69294802-69294821 | MS.gene73913:intron | 35.0% |
!! | TTGTTATTTGGCGGAAATCA+AGG | - | chr3.3:69293376-69293395 | MS.gene73913:intron | 35.0% |
!! | TTGTTGGTTGATGAGTTTAG+TGG | - | chr3.3:69293681-69293700 | MS.gene73913:intron | 35.0% |
!!! | GTATCCTTCTGCTGTTTTTT+TGG | + | chr3.3:69293905-69293924 | None:intergenic | 35.0% |
AACATTACAGGAGCAATGGT+TGG | - | chr3.3:69296320-69296339 | MS.gene73913:CDS | 40.0% | |
ACCCCATTTAATGAGTTCTC+TGG | + | chr3.3:69294395-69294414 | None:intergenic | 40.0% | |
ACGAATGTGTTTGTCTTGTG+TGG | - | chr3.3:69293002-69293021 | MS.gene73913:intron | 40.0% | |
ACGACATATTGGAGAGATTG+TGG | + | chr3.3:69295560-69295579 | None:intergenic | 40.0% | |
AGCAATGGAATTTCATGGAG+AGG | - | chr3.3:69294190-69294209 | MS.gene73913:intron | 40.0% | |
AGGAATTCAAAGCAGCTTGT+TGG | + | chr3.3:69292912-69292931 | None:intergenic | 40.0% | |
ATATCCTCATAAGGGTAACC+AGG | + | chr3.3:69295315-69295334 | None:intergenic | 40.0% | |
ATTCAAGGAATCAATGGGGA+GGG | - | chr3.3:69290953-69290972 | MS.gene73913:CDS | 40.0% | |
ATTTCATGGAGAGGAAACTC+AGG | - | chr3.3:69294199-69294218 | MS.gene73913:intron | 40.0% | |
CCAACAACGACTGTATTTGA+AGG | - | chr3.3:69294898-69294917 | MS.gene73913:intron | 40.0% | |
CCAAGACATGTTCATCATAG+AGG | - | chr3.3:69296215-69296234 | MS.gene73913:CDS | 40.0% | |
CCTCTATGATGAACATGTCT+TGG | + | chr3.3:69296218-69296237 | None:intergenic | 40.0% | |
CCTTCAAATACAGTCGTTGT+TGG | + | chr3.3:69294901-69294920 | None:intergenic | 40.0% | |
GAAGAAGAAGACCAAGTATG+TGG | - | chr3.3:69291131-69291150 | MS.gene73913:CDS | 40.0% | |
GAATACGCGACTTCTTCAAT+AGG | + | chr3.3:69294544-69294563 | None:intergenic | 40.0% | |
GACAGATGTCACTGTAGTAA+TGG | + | chr3.3:69294693-69294712 | None:intergenic | 40.0% | |
GCATCCAAAATCCACATACT+TGG | + | chr3.3:69291145-69291164 | None:intergenic | 40.0% | |
GCCAGAGAACTCATTAAATG+GGG | - | chr3.3:69294391-69294410 | MS.gene73913:intron | 40.0% | |
GCTGATTATATGGAAGCCAA+AGG | - | chr3.3:69295608-69295627 | MS.gene73913:intron | 40.0% | |
GGAAACTCAGGTTTACAAGA+TGG | - | chr3.3:69294211-69294230 | MS.gene73913:intron | 40.0% | |
GTGTAATTATCAGGTGGTGT+AGG | + | chr3.3:69291282-69291301 | None:intergenic | 40.0% | |
TAATCCTGGTTACCCTTATG+AGG | - | chr3.3:69295308-69295327 | MS.gene73913:intron | 40.0% | |
TCAGGGACTTCCGATAAAAT+TGG | - | chr3.3:69293549-69293568 | MS.gene73913:intron | 40.0% | |
TGACAAATTTGGTACCTGAG+AGG | + | chr3.3:69295696-69295715 | None:intergenic | 40.0% | |
TGCTTATGGAAAATCCGCTT+AGG | - | chr3.3:69292681-69292700 | MS.gene73913:intron | 40.0% | |
TGGTGGTTATTATGATGCAG+GGG | - | chr3.3:69294264-69294283 | MS.gene73913:intron | 40.0% | |
TTAACAAGCACAACAGGTAG+TGG | - | chr3.3:69296446-69296465 | MS.gene73913:CDS | 40.0% | |
TTATTGAACCAGCCTTTGGA+AGG | + | chr3.3:69292322-69292341 | None:intergenic | 40.0% | |
TTCCATAAGCACAGTTTCAG+GGG | + | chr3.3:69292672-69292691 | None:intergenic | 40.0% | |
TTGAATAAGCAGCATCGTCT+AGG | + | chr3.3:69294978-69294997 | None:intergenic | 40.0% | |
! | ACTACCTGTTGTGCTTGTTA+AGG | + | chr3.3:69296447-69296466 | None:intergenic | 40.0% |
! | AGAGCAAGGGTGTAATTATC+AGG | + | chr3.3:69291291-69291310 | None:intergenic | 40.0% |
! | ATTTTATCGGAAGTCCCTGA+AGG | + | chr3.3:69293549-69293568 | None:intergenic | 40.0% |
! | CTGCAATGTTGCTTCTAACA+AGG | - | chr3.3:69295271-69295290 | MS.gene73913:intron | 40.0% |
! | CTTTTGAATAGGCGTGGTTT+TGG | - | chr3.3:69291621-69291640 | MS.gene73913:intron | 40.0% |
! | GGTATACCACTCATTTTCAG+GGG | - | chr3.3:69295970-69295989 | MS.gene73913:intron | 40.0% |
! | TGTCGTCAATGCTGCATTTT+TGG | - | chr3.3:69295574-69295593 | MS.gene73913:intron | 40.0% |
! | TGTTGCTTCTAACAAGGGTT+AGG | - | chr3.3:69295277-69295296 | MS.gene73913:intron | 40.0% |
! | TTTTATCGGAAGTCCCTGAA+GGG | + | chr3.3:69293548-69293567 | None:intergenic | 40.0% |
!! | ATGCAGCATTGACGACATAT+TGG | + | chr3.3:69295571-69295590 | None:intergenic | 40.0% |
!! | GGGTTGATACAATTGAACCA+CGG | - | chr3.3:69295530-69295549 | MS.gene73913:intron | 40.0% |
!! | GTTGGTGGTTATTATGATGC+AGG | - | chr3.3:69294262-69294281 | MS.gene73913:intron | 40.0% |
!! | TGAGTCACAAGGCATTGAAA+TGG | - | chr3.3:69291172-69291191 | MS.gene73913:CDS | 40.0% |
ACATAACAAGTGTCCCCTTC+AGG | - | chr3.3:69293531-69293550 | MS.gene73913:intron | 45.0% | |
ATACCATCCAGGTACACCTT+TGG | + | chr3.3:69295627-69295646 | None:intergenic | 45.0% | |
ATCCCCTGAAACTGTGCTTA+TGG | - | chr3.3:69292667-69292686 | MS.gene73913:intron | 45.0% | |
ATGCATCGTGTTGAGTCACA+AGG | - | chr3.3:69291161-69291180 | MS.gene73913:CDS | 45.0% | |
ATGGGATGCAGAACTGTTGA+AGG | + | chr3.3:69294437-69294456 | None:intergenic | 45.0% | |
ATTACAGGAGCAATGGTTGG+AGG | - | chr3.3:69296323-69296342 | MS.gene73913:CDS | 45.0% | |
CACCAGATGATCACTACTGT+TGG | - | chr3.3:69294845-69294864 | MS.gene73913:intron | 45.0% | |
CATAACAAGTGTCCCCTTCA+GGG | - | chr3.3:69293532-69293551 | MS.gene73913:intron | 45.0% | |
CATTCAAGGAATCAATGGGG+AGG | - | chr3.3:69290952-69290971 | MS.gene73913:CDS | 45.0% | |
CCAACTTTAGCTGGAAATGC+AGG | - | chr3.3:69296401-69296420 | MS.gene73913:CDS | 45.0% | |
CCTGCATTTCCAGCTAAAGT+TGG | + | chr3.3:69296404-69296423 | None:intergenic | 45.0% | |
CCTTCCTATCATCATTGCCA+AGG | - | chr3.3:69291233-69291252 | MS.gene73913:CDS | 45.0% | |
CCTTGGCAATGATGATAGGA+AGG | + | chr3.3:69291236-69291255 | None:intergenic | 45.0% | |
GATCATGGTAATCGACGTGA+GGG | - | chr3.3:69291063-69291082 | MS.gene73913:CDS | 45.0% | |
GTGGATCACTGAATGGTTCT+AGG | - | chr3.3:69294821-69294840 | MS.gene73913:intron | 45.0% | |
GTTAGAAGCAACATTGCAGC+AGG | + | chr3.3:69295270-69295289 | None:intergenic | 45.0% | |
TACACATTCGTACACACACG+TGG | - | chr3.3:69292580-69292599 | MS.gene73913:CDS | 45.0% | |
TAGCGCTTTGTGAAGAGCAA+GGG | + | chr3.3:69291304-69291323 | None:intergenic | 45.0% | |
TATTTGGCGGAAATCAAGGG+AGG | - | chr3.3:69293380-69293399 | MS.gene73913:intron | 45.0% | |
TGATCATGGTAATCGACGTG+AGG | - | chr3.3:69291062-69291081 | MS.gene73913:CDS | 45.0% | |
TGATGTGCCTAAGAATGCCA+AGG | - | chr3.3:69295194-69295213 | MS.gene73913:intron | 45.0% | |
TGCCAACAGTAGTGATCATC+TGG | + | chr3.3:69294850-69294869 | None:intergenic | 45.0% | |
TGGACGAGACATTTCAAAGC+TGG | - | chr3.3:69291088-69291107 | MS.gene73913:CDS | 45.0% | |
TTAGGACCACAATACCATCC+AGG | + | chr3.3:69295638-69295657 | None:intergenic | 45.0% | |
TTGGCATTCTTAGGCACATC+AGG | + | chr3.3:69295195-69295214 | None:intergenic | 45.0% | |
TTTATCGGAAGTCCCTGAAG+GGG | + | chr3.3:69293547-69293566 | None:intergenic | 45.0% | |
TTTGATGAGTACATGTGGGG+TGG | - | chr3.3:69295114-69295133 | MS.gene73913:intron | 45.0% | |
! | AAGGAGTTGACGGGTAAAAG+GGG | + | chr3.3:69292303-69292322 | None:intergenic | 45.0% |
! | AGCAATAGTGAAGTGCCATC+GGG | - | chr3.3:69290991-69291010 | MS.gene73913:CDS | 45.0% |
! | ATTACTCATGTGCTGGTGGT+TGG | - | chr3.3:69296264-69296283 | MS.gene73913:CDS | 45.0% |
! | CAGCAATAGTGAAGTGCCAT+CGG | - | chr3.3:69290990-69291009 | MS.gene73913:CDS | 45.0% |
! | GAAGGAGTTGACGGGTAAAA+GGG | + | chr3.3:69292304-69292323 | None:intergenic | 45.0% |
! | GCAAGGGTGTAATTATCAGG+TGG | + | chr3.3:69291288-69291307 | None:intergenic | 45.0% |
! | GCTTGGTTGTATTTTGCCAC+TGG | - | chr3.3:69295138-69295157 | MS.gene73913:intron | 45.0% |
!! | AAAGGCATTTGCAACCTCTC+AGG | - | chr3.3:69295679-69295698 | MS.gene73913:intron | 45.0% |
!! | CACATCAGGATTAGTTGCCA+AGG | + | chr3.3:69295181-69295200 | None:intergenic | 45.0% |
!! | GGATTTTCTGGTCCAAATGG+TGG | + | chr3.3:69296503-69296522 | None:intergenic | 45.0% |
!! | GGTGGATTTTCTGGTCCAAA+TGG | + | chr3.3:69296506-69296525 | None:intergenic | 45.0% |
!! | TAGGTTGGTGGATCACTGAA+TGG | - | chr3.3:69294814-69294833 | MS.gene73913:intron | 45.0% |
!!! | ATTAATATATTTTTATACAA+CGG | - | chr3.3:69293141-69293160 | MS.gene73913:CDS | 5.0% |
!!! | TTTTTCATTTATAATATTAA+GGG | + | chr3.3:69292036-69292055 | None:intergenic | 5.0% |
AAGGCAGCGTTGCTTGATCA+TGG | - | chr3.3:69291048-69291067 | MS.gene73913:CDS | 50.0% | |
AATACAGTCGTTGTTGGGCG+TGG | + | chr3.3:69294895-69294914 | None:intergenic | 50.0% | |
ACCTGACCTTGCAGGAGAAA+TGG | - | chr3.3:69294921-69294940 | MS.gene73913:intron | 50.0% | |
CAAGGGTCGGGTTTAAACTC+TGG | + | chr3.3:69291912-69291931 | None:intergenic | 50.0% | |
CGTGGATAGCTCATGTCTTC+TGG | + | chr3.3:69294877-69294896 | None:intergenic | 50.0% | |
GGGAGATTGCCAAAGAGCAA+TGG | - | chr3.3:69294175-69294194 | MS.gene73913:intron | 50.0% | |
GGGCTTATTGAACCAGCCTT+TGG | + | chr3.3:69292326-69292345 | None:intergenic | 50.0% | |
GGTGTACCTGGATGGTATTG+TGG | - | chr3.3:69295629-69295648 | MS.gene73913:intron | 50.0% | |
GTAGCGCTTTGTGAAGAGCA+AGG | + | chr3.3:69291305-69291324 | None:intergenic | 50.0% | |
TACCCGTCAACTCCTTCCAA+AGG | - | chr3.3:69292307-69292326 | MS.gene73913:CDS | 50.0% | |
TGCCTTGTCCCATTGATCTC+CGG | + | chr3.3:69291034-69291053 | None:intergenic | 50.0% | |
TGGTAATCGACGTGAGGGAT+TGG | - | chr3.3:69291068-69291087 | MS.gene73913:CDS | 50.0% | |
TTTGAAGGACCTGACCTTGC+AGG | - | chr3.3:69294913-69294932 | MS.gene73913:intron | 50.0% | |
! | AAGCCAAAGGTGTACCTGGA+TGG | - | chr3.3:69295621-69295640 | MS.gene73913:intron | 50.0% |
! | AGCCTTTGGAAGGAGTTGAC+GGG | + | chr3.3:69292312-69292331 | None:intergenic | 50.0% |
! | ATGGAAGCCAAAGGTGTACC+TGG | - | chr3.3:69295617-69295636 | MS.gene73913:intron | 50.0% |
! | CAGCCTTTGGAAGGAGTTGA+CGG | + | chr3.3:69292313-69292332 | None:intergenic | 50.0% |
! | GGAAGGAGTTGACGGGTAAA+AGG | + | chr3.3:69292305-69292324 | None:intergenic | 50.0% |
AGTACATGTGGGGTGGTGCT+TGG | - | chr3.3:69295121-69295140 | MS.gene73913:intron | 55.0% | |
CACCGGAGATCAATGGGACA+AGG | - | chr3.3:69291029-69291048 | MS.gene73913:CDS | 55.0% | |
CATGGTTTCCAAGGAGGTGG+TGG | + | chr3.3:69296530-69296549 | None:intergenic | 55.0% | |
CGTCAACTCCTTCCAAAGGC+TGG | - | chr3.3:69292311-69292330 | MS.gene73913:CDS | 55.0% | |
GCCATTTCTCCTGCAAGGTC+AGG | + | chr3.3:69294925-69294944 | None:intergenic | 55.0% | |
GGAGAGATTGTGGTTGTCCG+TGG | + | chr3.3:69295550-69295569 | None:intergenic | 55.0% | |
TGTCCCATTGATCTCCGGTG+CGG | + | chr3.3:69291029-69291048 | None:intergenic | 55.0% | |
! | CATGTGCTGGTGGTTGGAAG+TGG | - | chr3.3:69296270-69296289 | MS.gene73913:CDS | 55.0% |
! | CTGCTGCCATTTCTCCTGCA+AGG | + | chr3.3:69294930-69294949 | None:intergenic | 55.0% |
!!! | GGTGGTGGAGGTGGATTTTC+TGG | + | chr3.3:69296515-69296534 | None:intergenic | 55.0% |
ATCCACCTCCACCACCTCCT+TGG | - | chr3.3:69296519-69296538 | MS.gene73913:CDS | 60.0% | |
CAGCCGCACCGGAGATCAAT+GGG | - | chr3.3:69291023-69291042 | MS.gene73913:CDS | 60.0% | |
! | GGTTTCCAAGGAGGTGGTGG+AGG | + | chr3.3:69296527-69296546 | None:intergenic | 60.0% |
!! | TTCCAAGGAGGTGGTGGAGG+TGG | + | chr3.3:69296524-69296543 | None:intergenic | 60.0% |
CCAGCCGCACCGGAGATCAA+TGG | - | chr3.3:69291022-69291041 | MS.gene73913:CDS | 65.0% | |
CCATTGATCTCCGGTGCGGC+TGG | + | chr3.3:69291025-69291044 | None:intergenic | 65.0% | |
GGCGATGAGACCAGCCGCAC+CGG | - | chr3.3:69291012-69291031 | MS.gene73913:CDS | 70.0% | |
!! | CGGCTGGTCTCATCGCCCGA+TGG | + | chr3.3:69291009-69291028 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 69290949 | 69296550 | 69290949 | ID=MS.gene73913 |
chr3.3 | mRNA | 69290949 | 69296550 | 69290949 | ID=MS.gene73913.t1;Parent=MS.gene73913 |
chr3.3 | exon | 69296154 | 69296550 | 69296154 | ID=MS.gene73913.t1.exon1;Parent=MS.gene73913.t1 |
chr3.3 | CDS | 69296154 | 69296550 | 69296154 | ID=cds.MS.gene73913.t1;Parent=MS.gene73913.t1 |
chr3.3 | exon | 69293022 | 69293326 | 69293022 | ID=MS.gene73913.t1.exon2;Parent=MS.gene73913.t1 |
chr3.3 | CDS | 69293022 | 69293326 | 69293022 | ID=cds.MS.gene73913.t1;Parent=MS.gene73913.t1 |
chr3.3 | exon | 69292085 | 69292682 | 69292085 | ID=MS.gene73913.t1.exon3;Parent=MS.gene73913.t1 |
chr3.3 | CDS | 69292085 | 69292682 | 69292085 | ID=cds.MS.gene73913.t1;Parent=MS.gene73913.t1 |
chr3.3 | exon | 69291799 | 69291971 | 69291799 | ID=MS.gene73913.t1.exon4;Parent=MS.gene73913.t1 |
chr3.3 | CDS | 69291799 | 69291971 | 69291799 | ID=cds.MS.gene73913.t1;Parent=MS.gene73913.t1 |
chr3.3 | exon | 69290949 | 69291350 | 69290949 | ID=MS.gene73913.t1.exon5;Parent=MS.gene73913.t1 |
chr3.3 | CDS | 69290949 | 69291350 | 69290949 | ID=cds.MS.gene73913.t1;Parent=MS.gene73913.t1 |
Gene Sequence |
Protein sequence |