Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77397.t1 | RHN46508.1 | 97.2 | 603 | 17 | 0 | 1 | 603 | 1 | 603 | 0.00E+00 | 1196.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77397.t1 | Q9FFT4 | 84.4 | 609 | 87 | 3 | 1 | 603 | 1 | 607 | 1.6e-308 | 1059.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77397.t1 | A0A396H177 | 97.2 | 603 | 17 | 0 | 1 | 603 | 1 | 603 | 0.0e+00 | 1196.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05234 | MS.gene77397 | 0.802922 | 4.46E-49 | -1.69E-46 |
| MS.gene053421 | MS.gene77397 | 0.811889 | 5.58E-51 | -1.69E-46 |
| MS.gene056387 | MS.gene77397 | -0.80909 | 2.25E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene77397 | -0.803214 | 3.88E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene77397 | MS.gene013671 | PPI |
| MS.gene02655 | MS.gene77397 | PPI |
| MS.gene77397 | MS.gene02488 | PPI |
| MS.gene77397 | MS.gene017382 | PPI |
| MS.gene77397 | MS.gene02654 | PPI |
| MS.gene81954 | MS.gene77397 | PPI |
| MS.gene33522 | MS.gene77397 | PPI |
| MS.gene013678 | MS.gene77397 | PPI |
| MS.gene064505 | MS.gene77397 | PPI |
| MS.gene81957 | MS.gene77397 | PPI |
| MS.gene26127 | MS.gene77397 | PPI |
| MS.gene81956 | MS.gene77397 | PPI |
| MS.gene77397 | MS.gene02651 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77397.t1 | MTR_7g069540 | 92.397 | 605 | 44 | 2 | 1 | 603 | 1 | 605 | 0.0 | 1140 |
| MS.gene77397.t1 | MTR_7g069500 | 91.376 | 603 | 24 | 2 | 1 | 603 | 1 | 575 | 0.0 | 1108 |
| MS.gene77397.t1 | MTR_4g017200 | 85.997 | 607 | 81 | 3 | 1 | 603 | 1 | 607 | 0.0 | 1073 |
| MS.gene77397.t1 | MTR_5g046610 | 85.667 | 607 | 83 | 3 | 1 | 603 | 1 | 607 | 0.0 | 1071 |
| MS.gene77397.t1 | MTR_2g015560 | 82.332 | 566 | 100 | 0 | 38 | 603 | 17 | 582 | 0.0 | 989 |
| MS.gene77397.t1 | MTR_2g009330 | 71.914 | 559 | 157 | 0 | 42 | 600 | 51 | 609 | 0.0 | 878 |
| MS.gene77397.t1 | MTR_5g046620 | 50.622 | 241 | 42 | 5 | 233 | 472 | 1 | 165 | 1.16e-64 | 209 |
| MS.gene77397.t1 | MTR_3g099190 | 24.070 | 511 | 338 | 18 | 47 | 531 | 84 | 570 | 2.33e-17 | 86.3 |
| MS.gene77397.t1 | MTR_1g011530 | 46.667 | 75 | 37 | 1 | 349 | 423 | 31 | 102 | 3.01e-16 | 75.1 |
| MS.gene77397.t1 | MTR_2g013120 | 22.426 | 544 | 357 | 17 | 27 | 531 | 57 | 574 | 1.30e-15 | 80.9 |
| MS.gene77397.t1 | MTR_2g027220 | 23.590 | 585 | 363 | 21 | 26 | 558 | 38 | 590 | 4.32e-15 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77397.t1 | AT5G54960 | 84.401 | 609 | 87 | 3 | 1 | 603 | 1 | 607 | 0.0 | 1075 |
| MS.gene77397.t1 | AT4G33070 | 85.173 | 607 | 86 | 1 | 1 | 603 | 1 | 607 | 0.0 | 1074 |
| MS.gene77397.t1 | AT5G01320 | 83.940 | 604 | 95 | 2 | 1 | 603 | 1 | 603 | 0.0 | 1058 |
| MS.gene77397.t1 | AT5G01330 | 82.550 | 596 | 100 | 1 | 8 | 603 | 1 | 592 | 0.0 | 1027 |
| MS.gene77397.t1 | AT5G17380 | 24.351 | 501 | 309 | 18 | 47 | 509 | 18 | 486 | 8.99e-18 | 87.4 |
| MS.gene77397.t1 | AT3G48560 | 22.612 | 513 | 343 | 15 | 47 | 531 | 103 | 589 | 2.03e-13 | 73.9 |
Find 156 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGGTGATGGAAGCTTTC+AGG | 0.099113 | 7.1:-32630916 | MS.gene77397:intron |
| CCCATTTCATTGGAACTTAT+TGG | 0.122987 | 7.1:-32631557 | MS.gene77397:CDS |
| CCATTTCATTGGAACTTATT+GGG | 0.218907 | 7.1:-32631556 | MS.gene77397:CDS |
| TACTTGGGAGCGAGTGAAAA+AGG | 0.254142 | 7.1:+32632148 | None:intergenic |
| GGACCCAATTCTAACGATTA+TGG | 0.256185 | 7.1:-32633539 | MS.gene77397:CDS |
| TCTGAAGTTTACTGAGGATT+TGG | 0.261297 | 7.1:+32630365 | None:intergenic |
| CTAACGATTATGGGACTAAT+AGG | 0.263273 | 7.1:-32633529 | MS.gene77397:CDS |
| AAACATAAGCTATCTTTCTT+TGG | 0.266263 | 7.1:+32630473 | None:intergenic |
| TGTATCCTCCGTTGTTTATC+AGG | 0.267154 | 7.1:+32630742 | None:intergenic |
| CTGAAGTTTACTGAGGATTT+GGG | 0.267884 | 7.1:+32630366 | None:intergenic |
| TTAACTCTCAAAGGTTCTTT+TGG | 0.273563 | 7.1:+32631240 | None:intergenic |
| CCCAATAAGTTCCAATGAAA+TGG | 0.289567 | 7.1:+32631556 | None:intergenic |
| GATCGGGTTGTGGTTGCTAA+TGG | 0.314935 | 7.1:-32631393 | MS.gene77397:CDS |
| AGGATTCTTCATCATACTAT+TGG | 0.323169 | 7.1:-32633509 | MS.gene77397:CDS |
| ATCAAGAACTGGAATTATAC+TGG | 0.339227 | 7.1:-32630681 | MS.gene77397:CDS |
| CAAATGCAATATGGTTCAAT+TGG | 0.346194 | 7.1:-32631002 | MS.gene77397:CDS |
| GTTGCTAATGGACCTGCATT+TGG | 0.356868 | 7.1:-32631381 | MS.gene77397:CDS |
| AACAAAATGTCCACAATGTT+AGG | 0.362479 | 7.1:-32633956 | None:intergenic |
| CAAGCAATCACTCGCTTCTC+GGG | 0.364950 | 7.1:+32630939 | None:intergenic |
| TATGAGTTTCAAATGCAATA+TGG | 0.365373 | 7.1:-32631011 | MS.gene77397:CDS |
| AGTCCCATAATCGTTAGAAT+TGG | 0.366490 | 7.1:+32633535 | None:intergenic |
| ATGAAATGGGGATGGTGCTC+AGG | 0.369145 | 7.1:+32631570 | None:intergenic |
| CATGAAACGACGTCGTTGTT+TGG | 0.370477 | 7.1:+32633911 | None:intergenic |
| CAGCCAATGCTTATATAAAC+AGG | 0.374707 | 7.1:+32632217 | None:intergenic |
| GCTGATGCATACTTGTTTGC+CGG | 0.375814 | 7.1:-32631492 | MS.gene77397:CDS |
| GTGTTGTTACGTTCACTGTT+GGG | 0.380795 | 7.1:-32633631 | MS.gene77397:CDS |
| GACGCTTCGCAAGTGCCTTT+AGG | 0.385948 | 7.1:+32631337 | None:intergenic |
| CAGTTCTTGATAACATTGTA+TGG | 0.391023 | 7.1:+32630693 | None:intergenic |
| CCAATAAGTTCCAATGAAAT+GGG | 0.391316 | 7.1:+32631557 | None:intergenic |
| TTGCCGCTTATTTGTATTGT+TGG | 0.393601 | 7.1:-32633563 | MS.gene77397:CDS |
| GAGCACCATCCCCATTTCAT+TGG | 0.394834 | 7.1:-32631567 | MS.gene77397:CDS |
| GCAAGCAATCACTCGCTTCT+CGG | 0.396937 | 7.1:+32630938 | None:intergenic |
| GAAGCAATTGCCACAGCAAC+AGG | 0.397655 | 7.1:-32630497 | MS.gene77397:CDS |
| ACCGACGTCTTCTCCGTTCC+CGG | 0.411535 | 7.1:-32633782 | MS.gene77397:CDS |
| GACCCAATTCTAACGATTAT+GGG | 0.421284 | 7.1:-32633538 | MS.gene77397:CDS |
| TTTAATGACTACAGCTCTGT+TGG | 0.425890 | 7.1:-32631462 | MS.gene77397:CDS |
| GTCCCATAATCGTTAGAATT+GGG | 0.439562 | 7.1:+32633536 | None:intergenic |
| CATACAATGTTATCAAGAAC+TGG | 0.450936 | 7.1:-32630692 | MS.gene77397:CDS |
| CTCAACTCCTGACTAAAATC+AGG | 0.453988 | 7.1:+32633482 | None:intergenic |
| GTTGTTTATCAGGAAGATGA+TGG | 0.461963 | 7.1:+32630752 | None:intergenic |
| ATCAAAATGCATCCAAATGC+AGG | 0.464273 | 7.1:+32631369 | None:intergenic |
| CATTGAAGTGATTGTTCACA+AGG | 0.466013 | 7.1:-32630450 | MS.gene77397:CDS |
| TGTGTTGTTACGTTCACTGT+TGG | 0.474626 | 7.1:-32633632 | MS.gene77397:CDS |
| CAATCATTGTGCAGCCCGAT+CGG | 0.474852 | 7.1:-32631410 | MS.gene77397:CDS |
| TGGTCTGTTGGTGCAACTCT+TGG | 0.476946 | 7.1:-32630978 | MS.gene77397:CDS |
| CCGTGATGCCATCAGCTAAA+GGG | 0.477384 | 7.1:-32631599 | MS.gene77397:CDS |
| CATTTCATTGGAACTTATTG+GGG | 0.478426 | 7.1:-32631555 | MS.gene77397:CDS |
| TTTGATGAAGGATTTCCTAA+AGG | 0.483996 | 7.1:-32631352 | MS.gene77397:CDS |
| CCGCTTATTTGTATTGTTGG+TGG | 0.484728 | 7.1:-32633560 | MS.gene77397:CDS |
| TTGAAATTGCCTGAGGGATG+TGG | 0.486372 | 7.1:-32631129 | MS.gene77397:CDS |
| TGCAATATGGTTCAATTGGA+TGG | 0.486831 | 7.1:-32630998 | MS.gene77397:CDS |
| TTGGGACCACCTACTAGTAC+AGG | 0.490734 | 7.1:+32631687 | None:intergenic |
| TTAATGACTACAGCTCTGTT+GGG | 0.491232 | 7.1:-32631461 | MS.gene77397:CDS |
| AGGCGATCGCGGTGGATGGT+TGG | 0.491547 | 7.1:+32633861 | None:intergenic |
| ACAACATCTGTTGTATATGT+TGG | 0.492054 | 7.1:+32631208 | None:intergenic |
| GACAGGATCACGACTGAAAG+TGG | 0.492188 | 7.1:+32632171 | None:intergenic |
| GAACCGGAGCTGAACCTCAT+TGG | 0.492362 | 7.1:-32633722 | MS.gene77397:CDS |
| CGACCATCTCGTCAATGAAC+CGG | 0.492546 | 7.1:-32633738 | MS.gene77397:CDS |
| AATCATTGTGCAGCCCGATC+GGG | 0.492725 | 7.1:-32631409 | MS.gene77397:CDS |
| AGTGTTCTTAATGCTATAGC+TGG | 0.494975 | 7.1:-32633602 | MS.gene77397:CDS |
| GCCGTGATGCCATCAGCTAA+AGG | 0.496857 | 7.1:-32631600 | MS.gene77397:CDS |
| ACAGCTGTGATTGCTGAGAC+AGG | 0.499666 | 7.1:-32631177 | MS.gene77397:CDS |
| AGCTGTGATTGCTGAGACAG+GGG | 0.505266 | 7.1:-32631175 | MS.gene77397:CDS |
| GCAGTAAAACCTGTACTAGT+AGG | 0.506078 | 7.1:-32631696 | MS.gene77397:CDS |
| ATTGAGGTTGAAATTCATGA+TGG | 0.507826 | 7.1:-32630717 | MS.gene77397:CDS |
| AGCATTGGCTGTAACTTGCC+TGG | 0.508186 | 7.1:-32632205 | MS.gene77397:CDS |
| AGACGTCGGTGACGCCGACT+TGG | 0.509266 | 7.1:+32633795 | None:intergenic |
| CATAGGATATTTGTCCCAGA+TGG | 0.511574 | 7.1:-32631282 | MS.gene77397:CDS |
| TGCTGTAACGAGCTGAATGC+TGG | 0.511832 | 7.1:-32633698 | MS.gene77397:CDS |
| GCTATTGGCAGCAGAAACTC+TGG | 0.513104 | 7.1:+32630394 | None:intergenic |
| TGTGCAGCCCGATCGGGTTG+TGG | 0.514001 | 7.1:-32631403 | MS.gene77397:CDS |
| GGTTCAATTGGATGGTCTGT+TGG | 0.514958 | 7.1:-32630990 | MS.gene77397:CDS |
| CAGGAGGCGATCGCGGTGGA+TGG | 0.516621 | 7.1:+32633857 | None:intergenic |
| TTAGCAACCACAACCCGATC+GGG | 0.517431 | 7.1:+32631396 | None:intergenic |
| AAGCCTGTTTATATAAGCAT+TGG | 0.517974 | 7.1:-32632220 | MS.gene77397:CDS |
| AACATAACATTAACTCTCAA+AGG | 0.524430 | 7.1:+32631231 | None:intergenic |
| TTGCTGAGACAGGGGACTCA+TGG | 0.524993 | 7.1:-32631167 | MS.gene77397:CDS |
| TTATTGGGGTGCTGTGAGTA+CGG | 0.525149 | 7.1:-32631541 | MS.gene77397:CDS |
| GAGTGTGAGGTTGAAGTCGC+CGG | 0.527382 | 7.1:+32633763 | None:intergenic |
| GGACTAGTCGGCGTGCGAGA+TGG | 0.529848 | 7.1:+32633816 | None:intergenic |
| TGTTGTTACGTTCACTGTTG+GGG | 0.530989 | 7.1:-32633630 | MS.gene77397:CDS |
| AACACTTACCCACATCCCTC+AGG | 0.537513 | 7.1:+32631120 | None:intergenic |
| TTTCTTTGGTCCTGTTGCTG+TGG | 0.540855 | 7.1:+32630487 | None:intergenic |
| CATCTGGGACAAATATCCTA+TGG | 0.541696 | 7.1:+32631283 | None:intergenic |
| TATGCTCGGTCACGTGGTGT+CGG | 0.546337 | 7.1:-32633659 | MS.gene77397:CDS |
| AAGCAAAGAGCTGCTTGAGT+GGG | 0.547778 | 7.1:-32630420 | MS.gene77397:CDS |
| CAAGCAAAGAGCTGCTTGAG+TGG | 0.547979 | 7.1:-32630421 | MS.gene77397:CDS |
| GTGATTGCTTGCATTGGTGA+TGG | 0.552907 | 7.1:-32630927 | MS.gene77397:CDS |
| GCGGCCGAGTGTAGCGTCGC+AGG | 0.553256 | 7.1:+32633838 | None:intergenic |
| ATAGGCTGTGGTGAATAACT+TGG | 0.556113 | 7.1:-32632296 | MS.gene77397:intron |
| GCCTCCTGCGACGCTACACT+CGG | 0.559561 | 7.1:-32633842 | MS.gene77397:CDS |
| TGCTTTACAGGTAACTGCAC+AGG | 0.560389 | 7.1:-32630808 | MS.gene77397:intron |
| TGAAGTTTACTGAGGATTTG+GGG | 0.560721 | 7.1:+32630367 | None:intergenic |
| GAGGTTGAAGTCGCCGGGAA+CGG | 0.560917 | 7.1:+32633769 | None:intergenic |
| AGTGTGAGGTTGAAGTCGCC+GGG | 0.566328 | 7.1:+32633764 | None:intergenic |
| TGAAATGGGGATGGTGCTCA+GGG | 0.568384 | 7.1:+32631571 | None:intergenic |
| ATTAGCAACCACAACCCGAT+CGG | 0.569214 | 7.1:+32631395 | None:intergenic |
| GCCGAGTGTAGCGTCGCAGG+AGG | 0.570351 | 7.1:+32633841 | None:intergenic |
| GGGACCATCCCTTTAGCTGA+TGG | 0.572399 | 7.1:+32631591 | None:intergenic |
| ATTGAGTAACCACATGGGGT+TGG | 0.573467 | 7.1:-32631757 | MS.gene77397:CDS |
| CCCTTTAGCTGATGGCATCA+CGG | 0.575591 | 7.1:+32631599 | None:intergenic |
| CTGCTTATGAAAATTACCAT+AGG | 0.576792 | 7.1:-32631299 | MS.gene77397:CDS |
| GCTCCGGTTCATTGACGAGA+TGG | 0.581139 | 7.1:+32633735 | None:intergenic |
| GATGCAATTCACAATGGTGA+AGG | 0.582372 | 7.1:-32630651 | MS.gene77397:CDS |
| GACGGTTATGCTCGGTCACG+TGG | 0.584252 | 7.1:-32633665 | MS.gene77397:CDS |
| ATCGCGGTGGATGGTTGGAT+CGG | 0.585135 | 7.1:+32633866 | None:intergenic |
| CAGCTGTGATTGCTGAGACA+GGG | 0.585307 | 7.1:-32631176 | MS.gene77397:CDS |
| AAGCGAGTGATTGCTTGCAT+TGG | 0.587132 | 7.1:-32630933 | MS.gene77397:CDS |
| TCACGACTGAAAGTGGGATG+AGG | 0.587384 | 7.1:+32632178 | None:intergenic |
| GCTTCTTCTCAAGAAAGAGA+AGG | 0.590573 | 7.1:-32631433 | MS.gene77397:CDS |
| CTAGTCGGCGTGCGAGATGG+CGG | 0.592292 | 7.1:+32633819 | None:intergenic |
| ATGCGGCTGACGGTTATGCT+CGG | 0.592533 | 7.1:-32633673 | MS.gene77397:CDS |
| AAAGTGGGATGAGGAATACC+AGG | 0.593405 | 7.1:+32632187 | None:intergenic |
| CAACCAATGAGGTTCAGCTC+CGG | 0.593930 | 7.1:+32633719 | None:intergenic |
| ATCTAAAGATCCTAACATTG+TGG | 0.599636 | 7.1:+32633946 | None:intergenic |
| CGAGCTGAATGCTGGTTATG+CGG | 0.602693 | 7.1:-32633690 | MS.gene77397:CDS |
| TTGTAGATTGAGTAACCACA+TGG | 0.603932 | 7.1:-32631763 | MS.gene77397:intron |
| ACAATGGTGAAGGAAAATGT+TGG | 0.606866 | 7.1:-32630641 | MS.gene77397:CDS |
| GTTCATTGACGAGATGGTCG+AGG | 0.607447 | 7.1:+32633741 | None:intergenic |
| AGTAGGTGGTCCCAAACTGA+GGG | 0.612881 | 7.1:-32631679 | MS.gene77397:CDS |
| AATGCTGGTTATGCGGCTGA+CGG | 0.614053 | 7.1:-32633683 | MS.gene77397:CDS |
| GAAGTTTACTGAGGATTTGG+GGG | 0.615619 | 7.1:+32630368 | None:intergenic |
| AGCAAAGAGCTGCTTGAGTG+GGG | 0.619453 | 7.1:-32630419 | MS.gene77397:CDS |
| AAGTTCCAATGAAATGGGGA+TGG | 0.619469 | 7.1:+32631562 | None:intergenic |
| AGCGTCGCAGGAGGCGATCG+CGG | 0.619577 | 7.1:+32633850 | None:intergenic |
| GTTGAACTAGCTGATGCAAG+TGG | 0.620188 | 7.1:-32631633 | MS.gene77397:CDS |
| AGGAAAATGTTGGACAACCA+AGG | 0.622216 | 7.1:-32630631 | MS.gene77397:intron |
| TAGTAGGTGGTCCCAAACTG+AGG | 0.624646 | 7.1:-32631680 | MS.gene77397:CDS |
| CAACGGAGGATACACAATTG+AGG | 0.625719 | 7.1:-32630733 | MS.gene77397:CDS |
| AGGTGGTCCCAAACTGAGGG+TGG | 0.630619 | 7.1:-32631676 | MS.gene77397:CDS |
| TGAAATTGCCTGAGGGATGT+GGG | 0.642606 | 7.1:-32631128 | MS.gene77397:intron |
| TGACGCCGACTTGGACTAGT+CGG | 0.644497 | 7.1:+32633804 | None:intergenic |
| CTGCTGCTTCCAACCCCATG+TGG | 0.646622 | 7.1:+32631748 | None:intergenic |
| GTTGTTACGTTCACTGTTGG+GGG | 0.649005 | 7.1:-32633629 | MS.gene77397:CDS |
| CGAGATGGTCGAGGAGTGTG+AGG | 0.649689 | 7.1:+32633750 | None:intergenic |
| GCTCGTTACAGCAACCAATG+AGG | 0.650504 | 7.1:+32633708 | None:intergenic |
| TGCATCAGCTAGTTCAACAA+AGG | 0.653637 | 7.1:+32631638 | None:intergenic |
| ACAGGATCACGACTGAAAGT+GGG | 0.654306 | 7.1:+32632172 | None:intergenic |
| AAGCAATCACTCGCTTCTCG+GGG | 0.655548 | 7.1:+32630940 | None:intergenic |
| CCACCAACAATACAAATAAG+CGG | 0.658046 | 7.1:+32633560 | None:intergenic |
| GATGCCATCAGCTAAAGGGA+TGG | 0.659243 | 7.1:-32631595 | MS.gene77397:CDS |
| CAATAAGTTCCAATGAAATG+GGG | 0.661557 | 7.1:+32631558 | None:intergenic |
| GGGGTTGGAAGCAGCAGTTG+AGG | 0.663030 | 7.1:-32631742 | MS.gene77397:CDS |
| ATCATCTTCCTGATAAACAA+CGG | 0.665526 | 7.1:-32630750 | MS.gene77397:CDS |
| GTAGATTGAGTAACCACATG+GGG | 0.665962 | 7.1:-32631761 | MS.gene77397:intron |
| TTGTTACGTTCACTGTTGGG+GGG | 0.670836 | 7.1:-32633628 | MS.gene77397:CDS |
| GCACGCCGACTAGTCCAAGT+CGG | 0.675934 | 7.1:-32633809 | MS.gene77397:CDS |
| GTAAAACCTGTACTAGTAGG+TGG | 0.676238 | 7.1:-32631693 | MS.gene77397:CDS |
| ACTGACTCTGAAGTTTACTG+AGG | 0.676440 | 7.1:+32630359 | None:intergenic |
| TTGATTGATGCAATTCACAA+TGG | 0.677426 | 7.1:-32630657 | MS.gene77397:CDS |
| TGTAGATTGAGTAACCACAT+GGG | 0.679957 | 7.1:-32631762 | MS.gene77397:intron |
| GTCGCAGGAGGCGATCGCGG+TGG | 0.694813 | 7.1:+32633853 | None:intergenic |
| AGGATGTATCGACAATGCTG+AGG | 0.697986 | 7.1:-32630788 | MS.gene77397:CDS |
| ATCTTCCTGATAAACAACGG+AGG | 0.706663 | 7.1:-32630747 | MS.gene77397:CDS |
| GTATCGACAATGCTGAGGTG+TGG | 0.717609 | 7.1:-32630783 | MS.gene77397:CDS |
| GCCGGGAACGGAGAAGACGT+CGG | 0.741181 | 7.1:+32633781 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTACATATTTGAATT+GGG | - | chr7.1:32631578-32631597 | MS.gene77397:CDS | 10.0% |
| !! | CATAAATTACATATTTGAAT+TGG | - | chr7.1:32631577-32631596 | MS.gene77397:CDS | 15.0% |
| !! | TAAAATCATGGTAATTTAAT+CGG | - | chr7.1:32631900-32631919 | MS.gene77397:intron | 15.0% |
| !! | TAAATTACATATTTGAATTG+GGG | - | chr7.1:32631579-32631598 | MS.gene77397:CDS | 15.0% |
| !! | TCAAATATGTAATTTATGTT+TGG | + | chr7.1:32631575-32631594 | None:intergenic | 15.0% |
| !! | AAAATCATGGTAATTTAATC+GGG | - | chr7.1:32631901-32631920 | MS.gene77397:intron | 20.0% |
| !! | TATAAAACATTTCATAGTGT+CGG | + | chr7.1:32631690-32631709 | None:intergenic | 20.0% |
| !!! | CACTTTTCGTTTTTAAATTA+CGG | + | chr7.1:32631796-32631815 | None:intergenic | 20.0% |
| !!! | GATTAAATTACCATGATTTT+AGG | + | chr7.1:32631901-32631920 | None:intergenic | 20.0% |
| !!! | GCTAAAATTACTACAATTTT+AGG | + | chr7.1:32631304-32631323 | None:intergenic | 20.0% |
| !!! | TTGCTAAATTTGTCATTTTT+TGG | - | chr7.1:32630901-32630920 | MS.gene77397:intron | 20.0% |
| ! | AAACATAAGCTATCTTTCTT+TGG | + | chr7.1:32633853-32633872 | None:intergenic | 25.0% |
| ! | AAATAGAGAAAGACTTACTT+GGG | + | chr7.1:32632193-32632212 | None:intergenic | 25.0% |
| ! | AACATAACATTAACTCTCAA+AGG | + | chr7.1:32633095-32633114 | None:intergenic | 25.0% |
| ! | AGAGCTTAAAAAAATCACTT+AGG | + | chr7.1:32631864-32631883 | None:intergenic | 25.0% |
| ! | ATACACTACATGTTTGAATT+GGG | - | chr7.1:32631228-32631247 | MS.gene77397:CDS | 25.0% |
| ! | GAGCTTAAAAAAATCACTTA+GGG | + | chr7.1:32631863-32631882 | None:intergenic | 25.0% |
| ! | TATGAGTTTCAAATGCAATA+TGG | - | chr7.1:32633312-32633331 | MS.gene77397:intron | 25.0% |
| ! | TCATCAACATTTCCAATAAT+CGG | + | chr7.1:32632513-32632532 | None:intergenic | 25.0% |
| !!! | AGGCTAGTTTTTGTTAAAAT+CGG | - | chr7.1:32632411-32632430 | MS.gene77397:intron | 25.0% |
| !!! | ATGTGGTTTGATTTGATTAT+AGG | - | chr7.1:32632009-32632028 | MS.gene77397:intron | 25.0% |
| AAGCCTGTTTATATAAGCAT+TGG | - | chr7.1:32632103-32632122 | MS.gene77397:intron | 30.0% | |
| AAGGTTTGTCAGAATTATAG+TGG | - | chr7.1:32631440-32631459 | MS.gene77397:CDS | 30.0% | |
| AAGTTTGGTAGAATCACATT+GGG | + | chr7.1:32632442-32632461 | None:intergenic | 30.0% | |
| ACAACATCTGTTGTATATGT+TGG | + | chr7.1:32633118-32633137 | None:intergenic | 30.0% | |
| ACACTTGGCTATTGTAAAAT+GGG | - | chr7.1:32631355-32631374 | MS.gene77397:CDS | 30.0% | |
| AGAGCTGTAGTCATTAAAAA+TGG | + | chr7.1:32632859-32632878 | None:intergenic | 30.0% | |
| AGGATTCTTCATCATACTAT+TGG | - | chr7.1:32630814-32630833 | MS.gene77397:intron | 30.0% | |
| ATCAAGAACTGGAATTATAC+TGG | - | chr7.1:32633642-32633661 | MS.gene77397:CDS | 30.0% | |
| ATCATCTTCCTGATAAACAA+CGG | - | chr7.1:32633573-32633592 | MS.gene77397:CDS | 30.0% | |
| ATCTAAAGATCCTAACATTG+TGG | + | chr7.1:32630380-32630399 | None:intergenic | 30.0% | |
| ATTGAGGTTGAAATTCATGA+TGG | - | chr7.1:32633606-32633625 | MS.gene77397:CDS | 30.0% | |
| CAAAAATTGAAATTGCCTGA+GGG | - | chr7.1:32633188-32633207 | MS.gene77397:intron | 30.0% | |
| CAAAATCATGGTAAGAACTA+TGG | - | chr7.1:32631527-32631546 | MS.gene77397:CDS | 30.0% | |
| CAAATAGAGAAAGACTTACT+TGG | + | chr7.1:32632194-32632213 | None:intergenic | 30.0% | |
| CAAATGCAATATGGTTCAAT+TGG | - | chr7.1:32633321-32633340 | MS.gene77397:intron | 30.0% | |
| CAATAAGTTCCAATGAAATG+GGG | + | chr7.1:32632768-32632787 | None:intergenic | 30.0% | |
| CAATGAGTTTGACAAAATCA+CGG | + | chr7.1:32631197-32631216 | None:intergenic | 30.0% | |
| CAGCACTTATATTCTTGTTA+TGG | + | chr7.1:32633759-32633778 | None:intergenic | 30.0% | |
| CATACAATGTTATCAAGAAC+TGG | - | chr7.1:32633631-32633650 | MS.gene77397:CDS | 30.0% | |
| CATACACTACATGTTTGAAT+TGG | - | chr7.1:32631227-32631246 | MS.gene77397:CDS | 30.0% | |
| CATTTCATTGGAACTTATTG+GGG | - | chr7.1:32632768-32632787 | MS.gene77397:intron | 30.0% | |
| CCAATAAGTTCCAATGAAAT+GGG | + | chr7.1:32632769-32632788 | None:intergenic | 30.0% | |
| CCATTTCATTGGAACTTATT+GGG | - | chr7.1:32632767-32632786 | MS.gene77397:intron | 30.0% | |
| CTGCTTATGAAAATTACCAT+AGG | - | chr7.1:32633024-32633043 | MS.gene77397:intron | 30.0% | |
| GAGCTGTAGTCATTAAAAAT+GGG | + | chr7.1:32632858-32632877 | None:intergenic | 30.0% | |
| GCACTTAGTTGTTGTAAAAT+GGG | - | chr7.1:32631968-32631987 | MS.gene77397:intron | 30.0% | |
| GTTTATTGTGTTTGTGAAGT+TGG | - | chr7.1:32630957-32630976 | MS.gene77397:CDS | 30.0% | |
| TAAGTTAACAAGTGCATTTC+TGG | + | chr7.1:32632473-32632492 | None:intergenic | 30.0% | |
| TACACTACATGTTTGAATTG+GGG | - | chr7.1:32631229-32631248 | MS.gene77397:CDS | 30.0% | |
| TACACTTGGCTATTGTAAAA+TGG | - | chr7.1:32631354-32631373 | MS.gene77397:CDS | 30.0% | |
| TCAAAAATTGAAATTGCCTG+AGG | - | chr7.1:32633187-32633206 | MS.gene77397:intron | 30.0% | |
| TCAAACATGTAGTGTATGTT+TGG | + | chr7.1:32631225-32631244 | None:intergenic | 30.0% | |
| TGCACTTAGTTGTTGTAAAA+TGG | - | chr7.1:32631967-32631986 | MS.gene77397:intron | 30.0% | |
| TTAACTTATGTGTGTAGAAG+AGG | - | chr7.1:32632485-32632504 | MS.gene77397:intron | 30.0% | |
| TTCAAATCATCCAAAGAATC+TGG | - | chr7.1:32632260-32632279 | MS.gene77397:CDS | 30.0% | |
| TTGATTGATGCAATTCACAA+TGG | - | chr7.1:32633666-32633685 | MS.gene77397:CDS | 30.0% | |
| TTTGATGAAGGATTTCCTAA+AGG | - | chr7.1:32632971-32632990 | MS.gene77397:intron | 30.0% | |
| ! | CAGTTCTTGATAACATTGTA+TGG | + | chr7.1:32633633-32633652 | None:intergenic | 30.0% |
| ! | CTGATAAAAATCTTGTTTGC+AGG | - | chr7.1:32633289-32633308 | MS.gene77397:intron | 30.0% |
| ! | CTTGTTATGGAAGAAATTTG+AGG | + | chr7.1:32633746-32633765 | None:intergenic | 30.0% |
| ! | TAACTTTTACAAAATCCCAG+TGG | + | chr7.1:32631491-32631510 | None:intergenic | 30.0% |
| ! | TTAACTCTCAAAGGTTCTTT+TGG | + | chr7.1:32633086-32633105 | None:intergenic | 30.0% |
| !! | AGTTGTTGTAAAATGGGTTT+TGG | - | chr7.1:32631974-32631993 | MS.gene77397:intron | 30.0% |
| !! | ATTTGGATGCATTTTGATGA+AGG | - | chr7.1:32632959-32632978 | MS.gene77397:intron | 30.0% |
| !! | TTTGATTTGATTATAGGCTG+TGG | - | chr7.1:32632015-32632034 | MS.gene77397:intron | 30.0% |
| !!! | ATGTTGCTTTTGCAAAATCA+TGG | - | chr7.1:32631165-32631184 | MS.gene77397:CDS | 30.0% |
| !!! | GCTAGTTTTTGTTAAAATCG+GGG | - | chr7.1:32632413-32632432 | MS.gene77397:intron | 30.0% |
| !!! | GGCTAGTTTTTGTTAAAATC+GGG | - | chr7.1:32632412-32632431 | MS.gene77397:intron | 30.0% |
| !!! | TTTGGTGATTGTTTTGAATG+TGG | - | chr7.1:32631992-32632011 | MS.gene77397:intron | 30.0% |
| AAAATCACTTAGGGTGTGTT+TGG | + | chr7.1:32631854-32631873 | None:intergenic | 35.0% | |
| AACAAAAGTCGCTATGTATC+TGG | + | chr7.1:32631409-32631428 | None:intergenic | 35.0% | |
| AACACAAAAGCCAGATTCTT+TGG | + | chr7.1:32632273-32632292 | None:intergenic | 35.0% | |
| AATTACTTGAAAGTGGGATG+AGG | + | chr7.1:32632219-32632238 | None:intergenic | 35.0% | |
| ACAATGGTGAAGGAAAATGT+TGG | - | chr7.1:32633682-32633701 | MS.gene77397:CDS | 35.0% | |
| ACACGCTAATTACTTGAAAG+TGG | + | chr7.1:32632226-32632245 | None:intergenic | 35.0% | |
| AGTCCCATAATCGTTAGAAT+TGG | + | chr7.1:32630791-32630810 | None:intergenic | 35.0% | |
| AGTGAGTTTGTCATGTGATT+TGG | - | chr7.1:32631129-32631148 | MS.gene77397:CDS | 35.0% | |
| AGTGTGTAGTGTGTACATTA+CGG | - | chr7.1:32630986-32631005 | MS.gene77397:CDS | 35.0% | |
| AGTGTTCTTAATGCTATAGC+TGG | - | chr7.1:32630721-32630740 | MS.gene77397:CDS | 35.0% | |
| ATCAAAATGCATCCAAATGC+AGG | + | chr7.1:32632957-32632976 | None:intergenic | 35.0% | |
| ATGTTGCTCTTGCAAAATCA+TGG | - | chr7.1:32631515-32631534 | MS.gene77397:CDS | 35.0% | |
| CAAGTTTGGTAGAATCACAT+TGG | + | chr7.1:32632443-32632462 | None:intergenic | 35.0% | |
| CACGCTAATTACTTGAAAGT+GGG | + | chr7.1:32632225-32632244 | None:intergenic | 35.0% | |
| CACTTGGCTATTGTAAAATG+GGG | - | chr7.1:32631356-32631375 | MS.gene77397:CDS | 35.0% | |
| CAGCCAATGCTTATATAAAC+AGG | + | chr7.1:32632109-32632128 | None:intergenic | 35.0% | |
| CATTGAAGTGATTGTTCACA+AGG | - | chr7.1:32633873-32633892 | MS.gene77397:CDS | 35.0% | |
| CCACCAACAATACAAATAAG+CGG | + | chr7.1:32630766-32630785 | None:intergenic | 35.0% | |
| CCCAATAAGTTCCAATGAAA+TGG | + | chr7.1:32632770-32632789 | None:intergenic | 35.0% | |
| CCCATTTCATTGGAACTTAT+TGG | - | chr7.1:32632766-32632785 | MS.gene77397:intron | 35.0% | |
| CTAACGATTATGGGACTAAT+AGG | - | chr7.1:32630794-32630813 | MS.gene77397:CDS | 35.0% | |
| CTTTCTCCTAAATGCTTTAC+AGG | - | chr7.1:32633503-32633522 | MS.gene77397:CDS | 35.0% | |
| GACCCAATTCTAACGATTAT+GGG | - | chr7.1:32630785-32630804 | MS.gene77397:CDS | 35.0% | |
| GGTGAGTTTGAAGAACTTAA+GGG | - | chr7.1:32631600-32631619 | MS.gene77397:CDS | 35.0% | |
| GTAGTCATTAAAAATGGGAC+CGG | + | chr7.1:32632853-32632872 | None:intergenic | 35.0% | |
| GTCCCATAATCGTTAGAATT+GGG | + | chr7.1:32630790-32630809 | None:intergenic | 35.0% | |
| GTTGTTTATCAGGAAGATGA+TGG | + | chr7.1:32633574-32633593 | None:intergenic | 35.0% | |
| GTTTGAATTAGCAGCAAGTT+TGG | - | chr7.1:32632349-32632368 | MS.gene77397:intron | 35.0% | |
| TAATTTAATCGGGCACATTG+TGG | - | chr7.1:32631911-32631930 | MS.gene77397:intron | 35.0% | |
| TGAGATTGTTGAAGCTTCAA+AGG | - | chr7.1:32632391-32632410 | MS.gene77397:intron | 35.0% | |
| TGCAATATGGTTCAATTGGA+TGG | - | chr7.1:32633325-32633344 | MS.gene77397:intron | 35.0% | |
| TGTAGATTGAGTAACCACAT+GGG | - | chr7.1:32632561-32632580 | MS.gene77397:intron | 35.0% | |
| TTAATGACTACAGCTCTGTT+GGG | - | chr7.1:32632862-32632881 | MS.gene77397:intron | 35.0% | |
| TTAGCGTGTCTTCGATATTA+CGG | - | chr7.1:32632237-32632256 | MS.gene77397:CDS | 35.0% | |
| TTGTAGATTGAGTAACCACA+TGG | - | chr7.1:32632560-32632579 | MS.gene77397:intron | 35.0% | |
| TTTAATGACTACAGCTCTGT+TGG | - | chr7.1:32632861-32632880 | MS.gene77397:intron | 35.0% | |
| ! | ACTTCAAAGGTTTTCCATCT+GGG | + | chr7.1:32633058-32633077 | None:intergenic | 35.0% |
| ! | AGTTTTTGTTAAAATCGGGG+TGG | - | chr7.1:32632416-32632435 | MS.gene77397:intron | 35.0% |
| ! | CAGTTACCTGTAAAGCATTT+AGG | + | chr7.1:32633512-32633531 | None:intergenic | 35.0% |
| ! | CATCGTGTTTAAAGCAAGTT+TGG | + | chr7.1:32632313-32632332 | None:intergenic | 35.0% |
| ! | CTGTAAAGCATTTAGGAGAA+AGG | + | chr7.1:32633505-32633524 | None:intergenic | 35.0% |
| ! | GATACATAGCGACTTTTGTT+TGG | - | chr7.1:32631409-32631428 | MS.gene77397:CDS | 35.0% |
| ! | TTCATGCATGCTTCATTTTC+AGG | - | chr7.1:32633780-32633799 | MS.gene77397:CDS | 35.0% |
| ! | TTGCCGCTTATTTGTATTGT+TGG | - | chr7.1:32630760-32630779 | MS.gene77397:CDS | 35.0% |
| !! | CTTTTGTTTGGTATCACAGA+AGG | - | chr7.1:32631421-32631440 | MS.gene77397:CDS | 35.0% |
| !! | TCAGACTGTTACTTGTTTTC+AGG | - | chr7.1:32630870-32630889 | MS.gene77397:intron | 35.0% |
| !! | TGGTATTCCTGATTTTAGTC+AGG | - | chr7.1:32630834-32630853 | MS.gene77397:intron | 35.0% |
| !!! | TTACTTGTTTTCAGGTTCGT+TGG | - | chr7.1:32630878-32630897 | MS.gene77397:intron | 35.0% |
| !!! | TTTTCAGGTATTCTGTGAAG+AGG | - | chr7.1:32633795-32633814 | MS.gene77397:CDS | 35.0% |
| AAGTTCCAATGAAATGGGGA+TGG | + | chr7.1:32632764-32632783 | None:intergenic | 40.0% | |
| AATCAAAGTGAGTTTGCCAC+TGG | - | chr7.1:32631472-32631491 | MS.gene77397:CDS | 40.0% | |
| ACTACATGTTTGAATTGGGG+TGG | - | chr7.1:32631232-32631251 | MS.gene77397:CDS | 40.0% | |
| AGGAAAATGTTGGACAACCA+AGG | - | chr7.1:32633692-32633711 | MS.gene77397:CDS | 40.0% | |
| ATAGGCTGTGGTGAATAACT+TGG | - | chr7.1:32632027-32632046 | MS.gene77397:intron | 40.0% | |
| ATCAAAGTGAGTTTGCCACT+GGG | - | chr7.1:32631473-32631492 | MS.gene77397:CDS | 40.0% | |
| ATCTTCCTGATAAACAACGG+AGG | - | chr7.1:32633576-32633595 | MS.gene77397:CDS | 40.0% | |
| CAACTAAGTGCATGCATGTT+TGG | + | chr7.1:32631959-32631978 | None:intergenic | 40.0% | |
| CAATGTCAAGTAACTCACCT+TGG | + | chr7.1:32633712-32633731 | None:intergenic | 40.0% | |
| CATAGGATATTTGTCCCAGA+TGG | - | chr7.1:32633041-32633060 | MS.gene77397:intron | 40.0% | |
| CCGCTTATTTGTATTGTTGG+TGG | - | chr7.1:32630763-32630782 | MS.gene77397:CDS | 40.0% | |
| CTACATGTTTGAATTGGGGT+GGG | - | chr7.1:32631233-32631252 | MS.gene77397:CDS | 40.0% | |
| CTCAACTCCTGACTAAAATC+AGG | + | chr7.1:32630844-32630863 | None:intergenic | 40.0% | |
| GATGCAATTCACAATGGTGA+AGG | - | chr7.1:32633672-32633691 | MS.gene77397:CDS | 40.0% | |
| GCAGTAAAACCTGTACTAGT+AGG | - | chr7.1:32632627-32632646 | MS.gene77397:intron | 40.0% | |
| GCTTCTTCTCAAGAAAGAGA+AGG | - | chr7.1:32632890-32632909 | MS.gene77397:intron | 40.0% | |
| GGACCCAATTCTAACGATTA+TGG | - | chr7.1:32630784-32630803 | MS.gene77397:CDS | 40.0% | |
| GGGTGAGTTTGAAGAACTTA+AGG | - | chr7.1:32631599-32631618 | MS.gene77397:CDS | 40.0% | |
| GTAAAACCTGTACTAGTAGG+TGG | - | chr7.1:32632630-32632649 | MS.gene77397:intron | 40.0% | |
| GTAGAAGAGGAACCGATTAT+TGG | - | chr7.1:32632498-32632517 | MS.gene77397:intron | 40.0% | |
| GTAGATTGAGTAACCACATG+GGG | - | chr7.1:32632562-32632581 | MS.gene77397:intron | 40.0% | |
| TAGCCAAGTGTATGCATGTT+TGG | + | chr7.1:32631346-32631365 | None:intergenic | 40.0% | |
| TGAATTAGCAGCAAGTTTGG+TGG | - | chr7.1:32632352-32632371 | MS.gene77397:intron | 40.0% | |
| TGCACGTTGTCCTAAAATCA+TGG | - | chr7.1:32631888-32631907 | MS.gene77397:intron | 40.0% | |
| TGCATCAGCTAGTTCAACAA+AGG | + | chr7.1:32632688-32632707 | None:intergenic | 40.0% | |
| TGTATCCTCCGTTGTTTATC+AGG | + | chr7.1:32633584-32633603 | None:intergenic | 40.0% | |
| TGTGATTCTACCAAACTTGC+TGG | - | chr7.1:32632444-32632463 | MS.gene77397:intron | 40.0% | |
| TGTGTTTGGATTGAGGGTTT+AGG | + | chr7.1:32631840-32631859 | None:intergenic | 40.0% | |
| TGTTGTTACGTTCACTGTTG+GGG | - | chr7.1:32630693-32630712 | MS.gene77397:CDS | 40.0% | |
| TTAGGGTGTGTTTGGATTGA+GGG | + | chr7.1:32631846-32631865 | None:intergenic | 40.0% | |
| TTTCTGGATTCCAGCAAGTT+TGG | + | chr7.1:32632457-32632476 | None:intergenic | 40.0% | |
| TTTGGATTGAGGGTTTAGGA+GGG | + | chr7.1:32631836-32631855 | None:intergenic | 40.0% | |
| ! | AACTTAAGGGTGTGTTTGGA+TGG | - | chr7.1:32631613-32631632 | MS.gene77397:CDS | 40.0% |
| ! | CATCTGGGACAAATATCCTA+TGG | + | chr7.1:32633043-32633062 | None:intergenic | 40.0% |
| ! | GAAGAACTTAAGGGTGTGTT+TGG | - | chr7.1:32631609-32631628 | MS.gene77397:CDS | 40.0% |
| ! | GACTTCAAAGGTTTTCCATC+TGG | + | chr7.1:32633059-32633078 | None:intergenic | 40.0% |
| ! | GTGTTGTTACGTTCACTGTT+GGG | - | chr7.1:32630692-32630711 | MS.gene77397:CDS | 40.0% |
| ! | TGTGTTGTTACGTTCACTGT+TGG | - | chr7.1:32630691-32630710 | MS.gene77397:CDS | 40.0% |
| !! | CTGATTTTAGTCAGGAGTTG+AGG | - | chr7.1:32630842-32630861 | MS.gene77397:intron | 40.0% |
| !! | TCTTTTGGTGCAGACTTCAA+AGG | + | chr7.1:32633071-32633090 | None:intergenic | 40.0% |
| AAAGTGGGATGAGGAATACC+AGG | + | chr7.1:32632139-32632158 | None:intergenic | 45.0% | |
| AAGCAAAGAGCTGCTTGAGT+GGG | - | chr7.1:32633903-32633922 | MS.gene77397:CDS | 45.0% | |
| AAGCGAGTGATTGCTTGCAT+TGG | - | chr7.1:32633390-32633409 | MS.gene77397:intron | 45.0% | |
| ACAGGATCACGACTGAAAGT+GGG | + | chr7.1:32632154-32632173 | None:intergenic | 45.0% | |
| ACTTGGGAGCGAGTGAAAAA+GGG | + | chr7.1:32632177-32632196 | None:intergenic | 45.0% | |
| ATTAGCAACCACAACCCGAT+CGG | + | chr7.1:32632931-32632950 | None:intergenic | 45.0% | |
| ATTGAGTAACCACATGGGGT+TGG | - | chr7.1:32632566-32632585 | MS.gene77397:intron | 45.0% | |
| CAACGGAGGATACACAATTG+AGG | - | chr7.1:32633590-32633609 | MS.gene77397:CDS | 45.0% | |
| CATGAAACGACGTCGTTGTT+TGG | + | chr7.1:32630415-32630434 | None:intergenic | 45.0% | |
| CTTAGGGTGTGTTTGGATTG+AGG | + | chr7.1:32631847-32631866 | None:intergenic | 45.0% | |
| GCTGATGCATACTTGTTTGC+CGG | - | chr7.1:32632831-32632850 | MS.gene77397:intron | 45.0% | |
| GGTCCAAACATGCATACACT+TGG | - | chr7.1:32631340-32631359 | MS.gene77397:CDS | 45.0% | |
| GGTTCAATTGGATGGTCTGT+TGG | - | chr7.1:32633333-32633352 | MS.gene77397:intron | 45.0% | |
| GTTGAACTAGCTGATGCAAG+TGG | - | chr7.1:32632690-32632709 | MS.gene77397:intron | 45.0% | |
| GTTGTTACGTTCACTGTTGG+GGG | - | chr7.1:32630694-32630713 | MS.gene77397:CDS | 45.0% | |
| GTTTGGATTGAGGGTTTAGG+AGG | + | chr7.1:32631837-32631856 | None:intergenic | 45.0% | |
| TACTTGGGAGCGAGTGAAAA+AGG | + | chr7.1:32632178-32632197 | None:intergenic | 45.0% | |
| TGAAATTGCCTGAGGGATGT+GGG | - | chr7.1:32633195-32633214 | MS.gene77397:intron | 45.0% | |
| TGCTTTACAGGTAACTGCAC+AGG | - | chr7.1:32633515-32633534 | MS.gene77397:CDS | 45.0% | |
| TGTGTTTGGATGGAGGGTTT+AGG | - | chr7.1:32631623-32631642 | MS.gene77397:CDS | 45.0% | |
| TTAGCTGTCGAACTCACTAG+TGG | - | chr7.1:32631319-32631338 | MS.gene77397:CDS | 45.0% | |
| TTGAAATTGCCTGAGGGATG+TGG | - | chr7.1:32633194-32633213 | MS.gene77397:intron | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | + | chr7.1:32631835-32631854 | None:intergenic | 45.0% | |
| TTGTTACGTTCACTGTTGGG+GGG | - | chr7.1:32630695-32630714 | MS.gene77397:CDS | 45.0% | |
| TTTCTTTGGTCCTGTTGCTG+TGG | + | chr7.1:32633839-32633858 | None:intergenic | 45.0% | |
| TTTGGATGGAGGGTTTAGGA+GGG | - | chr7.1:32631627-32631646 | MS.gene77397:CDS | 45.0% | |
| ! | AGGATGTATCGACAATGCTG+AGG | - | chr7.1:32633535-32633554 | MS.gene77397:CDS | 45.0% |
| ! | CAAGTTTGGTGGAATCATGG+TGG | - | chr7.1:32632363-32632382 | MS.gene77397:intron | 45.0% |
| ! | CAGCAAGTTTGGTGGAATCA+TGG | - | chr7.1:32632360-32632379 | MS.gene77397:intron | 45.0% |
| ! | GTGATTGCTTGCATTGGTGA+TGG | - | chr7.1:32633396-32633415 | MS.gene77397:intron | 45.0% |
| ! | GTTGCTAATGGACCTGCATT+TGG | - | chr7.1:32632942-32632961 | MS.gene77397:intron | 45.0% |
| ! | TAAGGGTGTGTTTGGATGGA+GGG | - | chr7.1:32631617-32631636 | MS.gene77397:CDS | 45.0% |
| ! | TTAAGGGTGTGTTTGGATGG+AGG | - | chr7.1:32631616-32631635 | MS.gene77397:CDS | 45.0% |
| !! | CATTGGTGATGGAAGCTTTC+AGG | - | chr7.1:32633407-32633426 | MS.gene77397:intron | 45.0% |
| !! | TTATTGGGGTGCTGTGAGTA+CGG | - | chr7.1:32632782-32632801 | MS.gene77397:intron | 45.0% |
| AACACTTACCCACATCCCTC+AGG | + | chr7.1:32633206-32633225 | None:intergenic | 50.0% | |
| AAGCAATCACTCGCTTCTCG+GGG | + | chr7.1:32633386-32633405 | None:intergenic | 50.0% | |
| AATCATTGTGCAGCCCGATC+GGG | - | chr7.1:32632914-32632933 | MS.gene77397:intron | 50.0% | |
| ACAGCTGTGATTGCTGAGAC+AGG | - | chr7.1:32633146-32633165 | MS.gene77397:intron | 50.0% | |
| AGCAAAGAGCTGCTTGAGTG+GGG | - | chr7.1:32633904-32633923 | MS.gene77397:CDS | 50.0% | |
| AGCTGTGATTGCTGAGACAG+GGG | - | chr7.1:32633148-32633167 | MS.gene77397:intron | 50.0% | |
| AGTAGGTGGTCCCAAACTGA+GGG | - | chr7.1:32632644-32632663 | MS.gene77397:intron | 50.0% | |
| ATGAAATGGGGATGGTGCTC+AGG | + | chr7.1:32632756-32632775 | None:intergenic | 50.0% | |
| ATTGAGGGTTTAGGAGGGGA+AGG | + | chr7.1:32631831-32631850 | None:intergenic | 50.0% | |
| CAACCAATGAGGTTCAGCTC+CGG | + | chr7.1:32630607-32630626 | None:intergenic | 50.0% | |
| CAAGCAAAGAGCTGCTTGAG+TGG | - | chr7.1:32633902-32633921 | MS.gene77397:CDS | 50.0% | |
| CAAGCAATCACTCGCTTCTC+GGG | + | chr7.1:32633387-32633406 | None:intergenic | 50.0% | |
| CAATCATTGTGCAGCCCGAT+CGG | - | chr7.1:32632913-32632932 | MS.gene77397:intron | 50.0% | |
| CAGCTGTGATTGCTGAGACA+GGG | - | chr7.1:32633147-32633166 | MS.gene77397:intron | 50.0% | |
| CCCTTTAGCTGATGGCATCA+CGG | + | chr7.1:32632727-32632746 | None:intergenic | 50.0% | |
| CCGTGATGCCATCAGCTAAA+GGG | - | chr7.1:32632724-32632743 | MS.gene77397:intron | 50.0% | |
| CGACCATCTCGTCAATGAAC+CGG | - | chr7.1:32630585-32630604 | MS.gene77397:intron | 50.0% | |
| GAAGCAATTGCCACAGCAAC+AGG | - | chr7.1:32633826-32633845 | MS.gene77397:CDS | 50.0% | |
| GACAGGATCACGACTGAAAG+TGG | + | chr7.1:32632155-32632174 | None:intergenic | 50.0% | |
| GAGCACCATCCCCATTTCAT+TGG | - | chr7.1:32632756-32632775 | MS.gene77397:intron | 50.0% | |
| GATGCCATCAGCTAAAGGGA+TGG | - | chr7.1:32632728-32632747 | MS.gene77397:intron | 50.0% | |
| GCAAGCAATCACTCGCTTCT+CGG | + | chr7.1:32633388-32633407 | None:intergenic | 50.0% | |
| GCTATTGGCAGCAGAAACTC+TGG | + | chr7.1:32633932-32633951 | None:intergenic | 50.0% | |
| GCTCGTTACAGCAACCAATG+AGG | + | chr7.1:32630618-32630637 | None:intergenic | 50.0% | |
| GTTCATTGACGAGATGGTCG+AGG | + | chr7.1:32630585-32630604 | None:intergenic | 50.0% | |
| GTTTGGATGGAGGGTTTAGG+AGG | - | chr7.1:32631626-32631645 | MS.gene77397:CDS | 50.0% | |
| TAGTAGGTGGTCCCAAACTG+AGG | - | chr7.1:32632643-32632662 | MS.gene77397:intron | 50.0% | |
| TCACGACTGAAAGTGGGATG+AGG | + | chr7.1:32632148-32632167 | None:intergenic | 50.0% | |
| TGAAATGGGGATGGTGCTCA+GGG | + | chr7.1:32632755-32632774 | None:intergenic | 50.0% | |
| TGCTGTAACGAGCTGAATGC+TGG | - | chr7.1:32630625-32630644 | MS.gene77397:intron | 50.0% | |
| TGGTCTGTTGGTGCAACTCT+TGG | - | chr7.1:32633345-32633364 | MS.gene77397:intron | 50.0% | |
| TTAGCAACCACAACCCGATC+GGG | + | chr7.1:32632930-32632949 | None:intergenic | 50.0% | |
| TTGAGGGTTTAGGAGGGGAA+GGG | + | chr7.1:32631830-32631849 | None:intergenic | 50.0% | |
| TTGGATGGAGGGTTTAGGAG+GGG | - | chr7.1:32631628-32631647 | MS.gene77397:CDS | 50.0% | |
| TTGGGACCACCTACTAGTAC+AGG | + | chr7.1:32632639-32632658 | None:intergenic | 50.0% | |
| ! | AATGCTGGTTATGCGGCTGA+CGG | - | chr7.1:32630640-32630659 | MS.gene77397:CDS | 50.0% |
| ! | CGAGCTGAATGCTGGTTATG+CGG | - | chr7.1:32630633-32630652 | MS.gene77397:CDS | 50.0% |
| ! | GATCGGGTTGTGGTTGCTAA+TGG | - | chr7.1:32632930-32632949 | MS.gene77397:intron | 50.0% |
| ! | GCTTTTGCCACCCTCAGTTT+GGG | + | chr7.1:32632657-32632676 | None:intergenic | 50.0% |
| ! | GTATCGACAATGCTGAGGTG+TGG | - | chr7.1:32633540-32633559 | MS.gene77397:CDS | 50.0% |
| ! | TGCTTTTGCCACCCTCAGTT+TGG | + | chr7.1:32632658-32632677 | None:intergenic | 50.0% |
| !! | AGCATTGGCTGTAACTTGCC+TGG | - | chr7.1:32632118-32632137 | MS.gene77397:intron | 50.0% |
| AGGATTTGGGGGACGGCTAT+TGG | + | chr7.1:32633947-32633966 | None:intergenic | 55.0% | |
| AGTGTGAGGTTGAAGTCGCC+GGG | + | chr7.1:32630562-32630581 | None:intergenic | 55.0% | |
| ATCGCGGTGGATGGTTGGAT+CGG | + | chr7.1:32630460-32630479 | None:intergenic | 55.0% | |
| ATGCGGCTGACGGTTATGCT+CGG | - | chr7.1:32630650-32630669 | MS.gene77397:CDS | 55.0% | |
| ATGGAGGGTTTAGGAGGGGA+AGG | - | chr7.1:32631632-32631651 | MS.gene77397:CDS | 55.0% | |
| GAACCGGAGCTGAACCTCAT+TGG | - | chr7.1:32630601-32630620 | MS.gene77397:intron | 55.0% | |
| GACGCTTCGCAAGTGCCTTT+AGG | + | chr7.1:32632989-32633008 | None:intergenic | 55.0% | |
| GAGTGTGAGGTTGAAGTCGC+CGG | + | chr7.1:32630563-32630582 | None:intergenic | 55.0% | |
| GCCGTGATGCCATCAGCTAA+AGG | - | chr7.1:32632723-32632742 | MS.gene77397:intron | 55.0% | |
| GCTCCGGTTCATTGACGAGA+TGG | + | chr7.1:32630591-32630610 | None:intergenic | 55.0% | |
| GGAGCGAGTGAAAAAGGGAC+AGG | + | chr7.1:32632172-32632191 | None:intergenic | 55.0% | |
| GGGACCATCCCTTTAGCTGA+TGG | + | chr7.1:32632735-32632754 | None:intergenic | 55.0% | |
| TATGCTCGGTCACGTGGTGT+CGG | - | chr7.1:32630664-32630683 | MS.gene77397:CDS | 55.0% | |
| TGGAGGGTTTAGGAGGGGAA+GGG | - | chr7.1:32631633-32631652 | MS.gene77397:CDS | 55.0% | |
| TTGCTGAGACAGGGGACTCA+TGG | - | chr7.1:32633156-32633175 | MS.gene77397:intron | 55.0% | |
| !! | TGACGCCGACTTGGACTAGT+CGG | + | chr7.1:32630522-32630541 | None:intergenic | 55.0% |
| ACCGACGTCTTCTCCGTTCC+CGG | - | chr7.1:32630541-32630560 | MS.gene77397:intron | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | - | chr7.1:32631636-32631655 | MS.gene77397:CDS | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | + | chr7.1:32631655-32631636 | None:intergenic | 60.0% | |
| AGGTGGTCCCAAACTGAGGG+TGG | - | chr7.1:32632647-32632666 | MS.gene77397:intron | 60.0% | |
| GACGGTTATGCTCGGTCACG+TGG | - | chr7.1:32630658-32630677 | MS.gene77397:CDS | 60.0% | |
| GAGGTTGAAGTCGCCGGGAA+CGG | + | chr7.1:32630557-32630576 | None:intergenic | 60.0% | |
| GGGGTTGGAAGCAGCAGTTG+AGG | - | chr7.1:32632581-32632600 | MS.gene77397:intron | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | - | chr7.1:32631637-32631656 | MS.gene77397:CDS | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | + | chr7.1:32631656-32631637 | None:intergenic | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | - | chr7.1:32631638-32631657 | MS.gene77397:CDS | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | + | chr7.1:32631657-32631638 | None:intergenic | 60.0% | |
| ! | CGAGATGGTCGAGGAGTGTG+AGG | + | chr7.1:32630576-32630595 | None:intergenic | 60.0% |
| ! | CTGCTGCTTCCAACCCCATG+TGG | + | chr7.1:32632578-32632597 | None:intergenic | 60.0% |
| ! | GCACGCCGACTAGTCCAAGT+CGG | - | chr7.1:32630514-32630533 | MS.gene77397:CDS | 60.0% |
| AGGCGATCGCGGTGGATGGT+TGG | + | chr7.1:32630465-32630484 | None:intergenic | 65.0% | |
| CTAGTCGGCGTGCGAGATGG+CGG | + | chr7.1:32630507-32630526 | None:intergenic | 65.0% | |
| GCCGGGAACGGAGAAGACGT+CGG | + | chr7.1:32630545-32630564 | None:intergenic | 65.0% | |
| GCCTCCTGCGACGCTACACT+CGG | - | chr7.1:32630481-32630500 | MS.gene77397:CDS | 65.0% | |
| TAGGAGGGGAAGGGAGGGGA+GGG | - | chr7.1:32631642-32631661 | MS.gene77397:CDS | 65.0% | |
| TAGGAGGGGAAGGGAGGGGA+GGG | + | chr7.1:32631661-32631642 | None:intergenic | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | - | chr7.1:32631641-32631660 | MS.gene77397:CDS | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | + | chr7.1:32631660-32631641 | None:intergenic | 65.0% | |
| ! | AGACGTCGGTGACGCCGACT+TGG | + | chr7.1:32630531-32630550 | None:intergenic | 65.0% |
| ! | TGTGCAGCCCGATCGGGTTG+TGG | - | chr7.1:32632920-32632939 | MS.gene77397:intron | 65.0% |
| !! | GGACTAGTCGGCGTGCGAGA+TGG | + | chr7.1:32630510-32630529 | None:intergenic | 65.0% |
| AGCGTCGCAGGAGGCGATCG+CGG | + | chr7.1:32630476-32630495 | None:intergenic | 70.0% | |
| CAGGAGGCGATCGCGGTGGA+TGG | + | chr7.1:32630469-32630488 | None:intergenic | 70.0% | |
| GCCGAGTGTAGCGTCGCAGG+AGG | + | chr7.1:32630485-32630504 | None:intergenic | 70.0% | |
| GCGGCCGAGTGTAGCGTCGC+AGG | + | chr7.1:32630488-32630507 | None:intergenic | 75.0% | |
| GTCGCAGGAGGCGATCGCGG+TGG | + | chr7.1:32630473-32630492 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 32630373 | 32633972 | 32630373 | ID=MS.gene77397 |
| chr7.1 | mRNA | 32630373 | 32633972 | 32630373 | ID=MS.gene77397.t1;Parent=MS.gene77397 |
| chr7.1 | exon | 32633454 | 32633972 | 32633454 | ID=MS.gene77397.t1.exon1;Parent=MS.gene77397.t1 |
| chr7.1 | CDS | 32633454 | 32633972 | 32633454 | ID=cds.MS.gene77397.t1;Parent=MS.gene77397.t1 |
| chr7.1 | exon | 32632151 | 32632314 | 32632151 | ID=MS.gene77397.t1.exon2;Parent=MS.gene77397.t1 |
| chr7.1 | CDS | 32632151 | 32632314 | 32632151 | ID=cds.MS.gene77397.t1;Parent=MS.gene77397.t1 |
| chr7.1 | exon | 32631129 | 32631779 | 32631129 | ID=MS.gene77397.t1.exon3;Parent=MS.gene77397.t1 |
| chr7.1 | CDS | 32631129 | 32631779 | 32631129 | ID=cds.MS.gene77397.t1;Parent=MS.gene77397.t1 |
| chr7.1 | exon | 32630917 | 32631034 | 32630917 | ID=MS.gene77397.t1.exon4;Parent=MS.gene77397.t1 |
| chr7.1 | CDS | 32630917 | 32631034 | 32630917 | ID=cds.MS.gene77397.t1;Parent=MS.gene77397.t1 |
| chr7.1 | exon | 32630632 | 32630820 | 32630632 | ID=MS.gene77397.t1.exon5;Parent=MS.gene77397.t1 |
| chr7.1 | CDS | 32630632 | 32630820 | 32630632 | ID=cds.MS.gene77397.t1;Parent=MS.gene77397.t1 |
| chr7.1 | exon | 32630373 | 32630543 | 32630373 | ID=MS.gene77397.t1.exon6;Parent=MS.gene77397.t1 |
| chr7.1 | CDS | 32630373 | 32630543 | 32630373 | ID=cds.MS.gene77397.t1;Parent=MS.gene77397.t1 |
| Gene Sequence |
| Protein sequence |
