AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene77800


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene77800.t1 MTR_8g044210 98.554 1176 17 0 1 1176 1 1176 0.0 2407
MS.gene77800.t1 MTR_3g007240 77.481 1159 237 7 21 1175 73 1211 0.0 1830
MS.gene77800.t1 MTR_3g007240 76.659 874 180 7 21 890 73 926 0.0 1346
MS.gene77800.t1 MTR_7g073480 58.311 1137 429 10 64 1159 137 1269 0.0 1310
MS.gene77800.t1 MTR_5g037210 36.796 1136 639 19 70 1157 24 1128 0.0 705
MS.gene77800.t1 MTR_6g006910 37.413 1144 646 23 69 1156 37 1166 0.0 691
MS.gene77800.t1 MTR_8g069920 36.446 1103 642 19 86 1143 67 1155 0.0 681
MS.gene77800.t1 MTR_4g112430 37.209 1075 615 20 69 1100 38 1095 0.0 679
MS.gene77800.t1 MTR_2g099690 36.222 1154 649 25 69 1156 40 1172 0.0 678
MS.gene77800.t1 MTR_3g037330 36.511 1112 642 23 78 1143 41 1134 0.0 657
MS.gene77800.t1 MTR_0021s0360 35.619 1123 629 24 69 1130 33 1122 0.0 632
MS.gene77800.t1 MTR_3g037330 35.821 1072 629 22 114 1143 10 1064 0.0 610
MS.gene77800.t1 MTR_2g090610 33.010 1133 655 24 70 1175 3 1058 0.0 562
MS.gene77800.t1 MTR_2g090610 34.821 1008 569 22 70 1060 3 939 1.85e-172 534
MS.gene77800.t1 MTR_2g099690 38.079 885 476 20 69 900 40 905 2.78e-170 527
MS.gene77800.t1 MTR_8g018290 35.749 828 455 17 393 1157 14 827 2.34e-155 487
MS.gene77800.t1 MTR_8g018290 35.422 830 462 17 393 1157 14 834 2.18e-154 484
MS.gene77800.t1 MTR_2g099690 36.588 850 467 20 69 865 40 870 1.43e-151 477
MS.gene77800.t1 MTR_8g062150 34.364 582 337 12 52 610 26 585 4.36e-95 316
MS.gene77800.t1 MTR_8g005730 38.596 171 82 4 552 722 16 163 2.72e-24 101
MS.gene77800.t1 MTR_8g005740 31.984 247 85 6 616 837 1 189 1.22e-19 88.6
MS.gene77800.t1 MTR_4g008650 21.928 529 256 17 386 899 389 775 6.67e-16 83.6
MS.gene77800.t1 MTR_4g008650 21.970 528 255 17 387 899 390 775 7.54e-16 83.2
MS.gene77800.t1 MTR_2g056040 55.172 58 26 0 702 759 1 58 3.95e-15 72.4
MS.gene77800.t1 MTR_8g027160 26.531 343 211 11 441 766 352 670 3.52e-11 68.2
MS.gene77800.t1 MTR_8g027160 25.714 350 205 11 441 766 352 670 3.69e-11 68.2
MS.gene77800.t1 MTR_8g027160 25.714 350 205 11 441 766 352 670 4.55e-11 67.8
MS.gene77800.t1 MTR_8g027160 25.714 350 205 11 441 766 352 670 5.61e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene77800.t1 AT5G04930 69.576 1157 332 7 21 1176 20 1157 0.0 1700
MS.gene77800.t1 AT3G27870 38.488 1151 617 27 69 1157 37 1158 0.0 716
MS.gene77800.t1 AT1G59820 35.906 1192 676 21 22 1175 11 1152 0.0 711
MS.gene77800.t1 AT3G13900 36.915 1154 640 21 70 1155 41 1174 0.0 696
MS.gene77800.t1 AT3G25610 37.288 1121 639 24 69 1143 39 1141 0.0 689
MS.gene77800.t1 AT1G17500 36.924 1151 641 30 69 1160 40 1164 0.0 688
MS.gene77800.t1 AT1G17500 36.924 1151 641 30 69 1160 40 1164 0.0 688
MS.gene77800.t1 AT1G54280 36.810 1160 635 26 70 1155 41 1176 0.0 686
MS.gene77800.t1 AT1G54280 36.810 1160 635 26 70 1155 41 1176 0.0 686
MS.gene77800.t1 AT1G54280 36.810 1160 635 26 70 1155 41 1176 0.0 686
MS.gene77800.t1 AT1G68710 35.893 1120 659 20 69 1143 41 1146 0.0 686
MS.gene77800.t1 AT1G68710 35.893 1120 659 20 69 1143 41 1146 0.0 686
MS.gene77800.t1 AT1G72700 36.606 1161 646 30 69 1164 40 1175 0.0 682
MS.gene77800.t1 AT1G72700 36.606 1161 646 30 69 1164 40 1175 0.0 682
MS.gene77800.t1 AT1G72700 36.606 1161 646 30 69 1164 40 1175 0.0 682
MS.gene77800.t1 AT1G26130 36.428 1131 634 24 69 1143 41 1142 0.0 681
MS.gene77800.t1 AT1G26130 36.396 1132 634 25 69 1143 41 1143 0.0 677
MS.gene77800.t1 AT1G26130 36.396 1132 634 25 69 1143 41 1143 0.0 677
MS.gene77800.t1 AT1G26130 36.396 1132 634 25 69 1143 41 1143 0.0 677
MS.gene77800.t1 AT1G68710 35.166 1146 658 21 69 1143 41 1172 0.0 674
MS.gene77800.t1 AT3G27870 40.452 974 513 20 69 999 37 986 0.0 661
MS.gene77800.t1 AT1G13210 35.911 1125 652 25 69 1143 37 1142 0.0 659
MS.gene77800.t1 AT3G27870 38.004 992 533 24 223 1157 1 967 0.0 595
MS.gene77800.t1 AT3G13900 38.519 932 500 16 70 944 41 956 0.0 593
MS.gene77800.t1 AT5G44240 33.455 1094 650 18 70 1154 3 1027 0.0 571
MS.gene77800.t1 AT5G44240 33.455 1094 650 18 70 1154 35 1059 0.0 571
MS.gene77800.t1 AT3G13900 36.797 924 504 17 70 940 41 937 3.08e-175 543

Find 236 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAATATCAATGAAGATTT+AGG 0.134302 8.1:-60603031 MS.gene77800:CDS
GACTATTTCGATAGTTATTT+TGG 0.183975 8.1:-60600323 MS.gene77800:CDS
CTACAGAGTCCTCAGCTTTA+TGG 0.189123 8.1:-60600493 MS.gene77800:CDS
AGTTTCAATGCGCTAGTATT+TGG 0.205298 8.1:-60602952 MS.gene77800:CDS
TGTTCCTCTCTTTGCATATT+GGG 0.205345 8.1:-60600383 MS.gene77800:CDS
CCCTTTGATCCATATCTTAC+AGG 0.214010 8.1:+60604231 None:intergenic
ATTACCTTATTATAGGAAAT+TGG 0.214718 8.1:-60603269 MS.gene77800:CDS
TGAATCGATTACCTTATTAT+AGG 0.220322 8.1:-60603276 MS.gene77800:CDS
GATTTCTCATGCATCCATTT+GGG 0.234204 8.1:-60600260 MS.gene77800:CDS
GAAAAGAATGTCTGTTATAT+TGG 0.236706 8.1:-60602102 MS.gene77800:CDS
GTTTCAATGCGCTAGTATTT+GGG 0.239935 8.1:-60602951 MS.gene77800:CDS
GATATCCTTGTACATTTCTA+TGG 0.241630 8.1:-60603143 MS.gene77800:CDS
AATCTCTCATTTGTTCTATC+AGG 0.248475 8.1:+60604129 None:intergenic
CACTGTAGATATAGCAAGTA+TGG 0.259906 8.1:-60600356 MS.gene77800:CDS
GAGGAAAGTTATCAATATTA+TGG 0.260563 8.1:-60603229 MS.gene77800:CDS
TTGTTCCTCTCTTTGCATAT+TGG 0.261562 8.1:-60600384 MS.gene77800:CDS
TTGACAAGGATCTTAGTAAA+AGG 0.262036 8.1:-60600522 MS.gene77800:CDS
AGAAAATAACCTATGCATAT+TGG 0.269137 8.1:-60601814 MS.gene77800:CDS
TAGGAATATATATGGATTTC+AGG 0.274349 8.1:-60603578 MS.gene77800:CDS
GGAAAGCCGGTATTAAAGTA+TGG 0.277372 8.1:-60601731 MS.gene77800:CDS
CTATGCAGGTTCAATGTCTT+GGG 0.277909 8.1:-60602149 MS.gene77800:intron
AATGAGAGATTTGAATTTGC+AGG 0.278596 8.1:-60604117 MS.gene77800:CDS
TCTTTGTGCTAATTCTGTTT+TGG 0.290282 8.1:-60600840 MS.gene77800:intron
AAATCCAATTTCCTATAATA+AGG 0.292418 8.1:+60603265 None:intergenic
TACAGAGTCCTCAGCTTTAT+GGG 0.300068 8.1:-60600492 MS.gene77800:CDS
AAAAGAATGTCTGTTATATT+GGG 0.301829 8.1:-60602101 MS.gene77800:CDS
GGATTTCTCATGCATCCATT+TGG 0.302390 8.1:-60600261 MS.gene77800:CDS
CACATAATGATTGATATTCT+TGG 0.309887 8.1:-60602429 MS.gene77800:CDS
TCAACTAGGGAAGTCACTTT+TGG 0.326432 8.1:-60604270 MS.gene77800:CDS
TGAATATCAATGAAGATTTA+GGG 0.327800 8.1:-60603030 MS.gene77800:CDS
CAATAGGTTAGGATTGGTTT+TGG 0.334033 8.1:-60603854 MS.gene77800:CDS
TGGCAAGCACCACATTATTC+TGG 0.338022 8.1:-60599346 MS.gene77800:CDS
GAAAATAACCTATGCATATT+GGG 0.338089 8.1:-60601813 MS.gene77800:CDS
TACCATCACTTCATGGTTAC+TGG 0.339835 8.1:-60600192 MS.gene77800:intron
TCGAGAAGTTTGAGAATAGA+AGG 0.341274 8.1:-60599220 MS.gene77800:CDS
GGTTTGAGGACGCTTGTTAT+TGG 0.342303 8.1:-60601948 MS.gene77800:CDS
TTATTCTGGTTATGTTTGTT+TGG 0.343657 8.1:-60599332 MS.gene77800:CDS
AAACCGAATAGGAATATATA+TGG 0.343990 8.1:-60603586 MS.gene77800:CDS
GATTAAGTATAGCAATTATA+AGG 0.352400 8.1:+60604004 None:intergenic
ATAGAAATGTACAAGGATAT+CGG 0.355230 8.1:+60603145 None:intergenic
GTCATTTCATAGAGAAGAAA+TGG 0.355531 8.1:-60603825 MS.gene77800:CDS
CCTATGGCGTTGATTATTGA+TGG 0.358296 8.1:-60601495 MS.gene77800:CDS
CAGATAAAGTTGAGAACAAT+AGG 0.358646 8.1:-60603870 MS.gene77800:CDS
AATCCATATATATTCCTATT+CGG 0.359921 8.1:+60603583 None:intergenic
CTTAGAGACTCAATAGCTTC+TGG 0.360179 8.1:+60601753 None:intergenic
TCCTCGAATATTGTACTTAG+AGG 0.362052 8.1:-60603517 MS.gene77800:CDS
GTTTGAGGACGCTTGTTATT+GGG 0.362402 8.1:-60601947 MS.gene77800:CDS
CAACACTAGTGTTATCTTTG+TGG 0.362784 8.1:+60599155 None:intergenic
GTCGTGTAGAAGACGTTTAC+AGG 0.364160 8.1:-60601604 MS.gene77800:CDS
GCTATGCAGGTTCAATGTCT+TGG 0.366620 8.1:-60602150 MS.gene77800:intron
CTTCAGTTTGTGCTGCTGTT+TGG 0.377271 8.1:-60603321 MS.gene77800:CDS
TGACGAGTAGCCAATTGATA+TGG 0.383546 8.1:+60601680 None:intergenic
ATTTGAATTTGCAGGGAATT+CGG 0.386310 8.1:-60604109 MS.gene77800:CDS
TATGTCAACGCTTGTTCATC+TGG 0.387878 8.1:+60602498 None:intergenic
CTTATTCTTCTGTGGGTTTG+AGG 0.389069 8.1:-60601962 MS.gene77800:CDS
CACGAAAAGGAGAGGTTTAG+TGG 0.390088 8.1:-60603625 MS.gene77800:CDS
TGATCCATATCTTACAGGTT+TGG 0.394759 8.1:+60604236 None:intergenic
TAAATCTTCATTGATATTCA+AGG 0.394762 8.1:+60603033 None:intergenic
GATGCTATACCATCACTTCA+TGG 0.395891 8.1:-60600199 MS.gene77800:CDS
GAGTCCAAACCTGTAAGATA+TGG 0.399018 8.1:-60604240 MS.gene77800:CDS
TGGGGTTGGCATCAGTGGTC+AGG 0.401702 8.1:-60601001 MS.gene77800:CDS
CAGAAGCTATTGAGTCTCTA+AGG 0.403410 8.1:-60601752 MS.gene77800:CDS
CTTCACTCTTATTCTTCTGT+GGG 0.407311 8.1:-60601969 MS.gene77800:CDS
CAAGAAACTGCCATATCAAT+TGG 0.409612 8.1:-60601690 MS.gene77800:CDS
AACTTGCTCATTCTCAAGGC+TGG 0.412722 8.1:+60602904 None:intergenic
TCATCATCAAGAAGAAGTTC+TGG 0.413308 8.1:-60604300 MS.gene77800:CDS
TGACGATAGCCGATACGTTA+TGG 0.415621 8.1:-60600426 MS.gene77800:CDS
CAGAAGAATAAGAGTGAAGA+TGG 0.418864 8.1:+60601973 None:intergenic
GGAGCTTGTTCGTGTTGGTC+AGG 0.421237 8.1:-60603122 MS.gene77800:CDS
GTTCAAACTCTTAATCTAGA+TGG 0.424791 8.1:-60603700 MS.gene77800:CDS
CATGTCGGTTATAGTTTACC+AGG 0.432869 8.1:-60603176 MS.gene77800:CDS
CAAGTACTTCTATGATTGGT+AGG 0.433645 8.1:-60601869 MS.gene77800:CDS
CAAGTTGAATACTCTCTTCA+AGG 0.436098 8.1:-60602887 MS.gene77800:intron
TCAATTTAAGTTTCACGAAA+AGG 0.436590 8.1:-60603638 MS.gene77800:CDS
TTTGAGAATAGAAGGGTCAA+TGG 0.436649 8.1:-60599212 MS.gene77800:CDS
AGTGGATTTGCAAGCAAAGA+TGG 0.436723 8.1:-60602633 MS.gene77800:CDS
ACATATGCTGCCGCTGCCTA+TGG 0.439035 8.1:-60602480 MS.gene77800:CDS
CAACCCCAACATCAGCCATT+TGG 0.441854 8.1:+60601016 None:intergenic
CAGGCTACAATGGAGGTTGA+TGG 0.445940 8.1:-60603559 MS.gene77800:CDS
ATTGGGGTGCAATGACAATT+CGG 0.449050 8.1:-60602084 MS.gene77800:CDS
TCTTCACTCTTATTCTTCTG+TGG 0.450704 8.1:-60601970 MS.gene77800:CDS
AAAGTTGAGAACAATAGGTT+AGG 0.450930 8.1:-60603865 MS.gene77800:CDS
ATGCTTCAGAATTTGATCAA+TGG 0.454118 8.1:-60601911 MS.gene77800:CDS
ATTAAAGTATGGGTGTTGAC+TGG 0.454694 8.1:-60601720 MS.gene77800:CDS
TGGATGTAATCAGGTGGACT+TGG 0.459902 8.1:-60600282 MS.gene77800:CDS
CGATGTATCAATGATCCAAA+TGG 0.463472 8.1:-60601031 MS.gene77800:CDS
CCTGTAAGATATGGATCAAA+GGG 0.464998 8.1:-60604231 MS.gene77800:CDS
GGAGGGTAGGCAAGCTGTAA+TGG 0.466999 8.1:-60600980 MS.gene77800:CDS
TCAATATAGTTGCCAACCTC+AGG 0.470528 8.1:+60601546 None:intergenic
ATATATTCTTGATAGTGAAC+TGG 0.471039 8.1:-60601460 MS.gene77800:CDS
GTAGCTCCGTTGCAAAAGGC+TGG 0.475516 8.1:-60601295 MS.gene77800:CDS
TGATCCAAATGGCTGATGTT+GGG 0.475834 8.1:-60601020 MS.gene77800:CDS
GCAGCAAGTACTTCTATGAT+TGG 0.480124 8.1:-60601873 MS.gene77800:CDS
TGAGAACAATAGGTTAGGAT+TGG 0.482905 8.1:-60603860 MS.gene77800:CDS
TGGAGTTGTTTCAACTCCTA+TGG 0.484075 8.1:-60601511 MS.gene77800:CDS
TTGTCTCTCTCGTAAAGAAT+AGG 0.484493 8.1:-60601270 MS.gene77800:CDS
GATGTTGGGGTTGGCATCAG+TGG 0.487356 8.1:-60601006 MS.gene77800:CDS
AGTCCTCAGCTTTATGGGGC+TGG 0.487402 8.1:-60600487 MS.gene77800:CDS
GCAGGGAATTCGGTTCGGAC+CGG 0.488633 8.1:-60604099 MS.gene77800:CDS
GGTCAATTTGCACTTGGCCA+TGG 0.490285 8.1:-60600302 MS.gene77800:CDS
GACGCTTGTTATTGGGATGC+GGG 0.490460 8.1:-60601940 MS.gene77800:CDS
TTGCAAGCAAAGATGGAAAA+CGG 0.491112 8.1:-60602626 MS.gene77800:CDS
TCCTCTAAGTACAATATTCG+AGG 0.493160 8.1:+60603516 None:intergenic
AAAGTTATCAATATTATGGA+TGG 0.497507 8.1:-60603225 MS.gene77800:CDS
GAGGTTGGCAACTATATTGA+AGG 0.497643 8.1:-60601543 MS.gene77800:CDS
AAGATGCATATGAGGATTGG+AGG 0.498020 8.1:-60603903 MS.gene77800:CDS
TAGAAATGTACAAGGATATC+GGG 0.498250 8.1:+60603146 None:intergenic
TTACGATTTCTTTCTTGCAC+TGG 0.499106 8.1:-60602601 MS.gene77800:CDS
AAAATGGCAACAACAATAGT+TGG 0.499937 8.1:+60600544 None:intergenic
GTTCCTCTCTTTGCATATTG+GGG 0.500684 8.1:-60600382 MS.gene77800:CDS
AATCTATCAGCTTGACTGTA+GGG 0.500945 8.1:+60602535 None:intergenic
CGAATTCAAGATTTCAGTGT+AGG 0.501122 8.1:-60603057 MS.gene77800:CDS
GGACGCTTGTTATTGGGATG+CGG 0.502399 8.1:-60601941 MS.gene77800:CDS
GGTTGGCATCAGTGGTCAGG+AGG 0.503044 8.1:-60600998 MS.gene77800:CDS
TCTTATTTGTACACGGACAC+TGG 0.506057 8.1:-60600915 MS.gene77800:CDS
AGAATCTTTGATCATGAAGT+AGG 0.508208 8.1:+60603099 None:intergenic
CGCAACTTTCATATGTGTCA+TGG 0.509300 8.1:-60600227 MS.gene77800:CDS
AATTTGCAGGGAATTCGGTT+CGG 0.509635 8.1:-60604104 MS.gene77800:CDS
CAACACCCATACTTTAATAC+CGG 0.510191 8.1:+60601725 None:intergenic
TCGAGTAGCTCCGTTGCAAA+AGG 0.511123 8.1:-60601299 MS.gene77800:CDS
ACTTGGCCATGGATGTAATC+AGG 0.511345 8.1:-60600291 MS.gene77800:CDS
TTAAAGTATGGGTGTTGACT+GGG 0.511818 8.1:-60601719 MS.gene77800:CDS
AACTTTGAAGAATTCTCAGA+TGG 0.512471 8.1:+60604342 None:intergenic
CCGACATGAGGAATGTGAAA+AGG 0.513314 8.1:+60603191 None:intergenic
ACCTGTAAGATATGGATCAA+AGG 0.514913 8.1:-60604232 MS.gene77800:CDS
ATTTCTCATGCATCCATTTG+GGG 0.515709 8.1:-60600259 MS.gene77800:CDS
ATGAGAGATTTGAATTTGCA+GGG 0.516205 8.1:-60604116 MS.gene77800:CDS
CTTGAAATCTGAATATCGTC+GGG 0.518724 8.1:+60599248 None:intergenic
TATATTGAAGGAAGTTCTGA+TGG 0.519157 8.1:-60601531 MS.gene77800:CDS
ATGCTTATAGAGCGAACCTC+AGG 0.520554 8.1:-60602453 MS.gene77800:CDS
TGCTGTGAAAGATGCATATG+AGG 0.524329 8.1:-60603911 MS.gene77800:CDS
AAAACAAAATCACAAGGAAT+CGG 0.524501 8.1:+60603757 None:intergenic
TGACAACAGCTATAAATGAA+TGG 0.524690 8.1:-60600603 MS.gene77800:CDS
ACTCAGGAGCTCCGTCTAAG+AGG 0.525510 8.1:-60603417 MS.gene77800:CDS
TGCATGAATTTGATAGTGAT+CGG 0.526715 8.1:-60602124 MS.gene77800:CDS
AATGTAGCTGCACCTGAGGT+TGG 0.530978 8.1:-60601558 MS.gene77800:CDS
TCTTGAAATCTGAATATCGT+CGG 0.531604 8.1:+60599247 None:intergenic
TGAAAGATGCATATGAGGAT+TGG 0.536868 8.1:-60603906 MS.gene77800:CDS
TTAAGTGCGAGAAACCGAAT+AGG 0.537373 8.1:-60603597 MS.gene77800:CDS
TCTATGGAGCTTGTTCGTGT+TGG 0.538618 8.1:-60603127 MS.gene77800:CDS
GTCAAGCTGATAGATTATCA+AGG 0.540142 8.1:-60602528 MS.gene77800:CDS
ATTGAATACAGACATAATAC+AGG 0.540454 8.1:-60602006 MS.gene77800:CDS
CACTATCAAGAATATATACA+AGG 0.541563 8.1:+60601466 None:intergenic
AAATGGAAAGATATTAGAGT+TGG 0.541680 8.1:-60603808 MS.gene77800:CDS
AACTGTTCAAACAAATTCCT+AGG 0.542452 8.1:+60604051 None:intergenic
AGAAGTACTTGCTGCCTCAA+AGG 0.546382 8.1:+60601881 None:intergenic
GTTGGCATCAGTGGTCAGGA+GGG 0.546555 8.1:-60600997 MS.gene77800:CDS
TAGGGCTGCTTTGCTTCGCA+AGG 0.549839 8.1:-60601850 MS.gene77800:CDS
ATCAAGAATATATACAAGGC+TGG 0.550049 8.1:+60601470 None:intergenic
GTGAGTCTAATTTGAAGACT+AGG 0.551484 8.1:-60603678 MS.gene77800:CDS
AAGTTATCAATATTATGGAT+GGG 0.551657 8.1:-60603224 MS.gene77800:CDS
GAAAGCCGGTATTAAAGTAT+GGG 0.552040 8.1:-60601730 MS.gene77800:CDS
ACAGAGTCCTCAGCTTTATG+GGG 0.554892 8.1:-60600491 MS.gene77800:CDS
ATTCAACTTGCTCATTCTCA+AGG 0.555225 8.1:+60602900 None:intergenic
GCATCAGTGGTCAGGAGGGT+AGG 0.555914 8.1:-60600993 MS.gene77800:CDS
GTTGGTGTTGCTGTGTATTG+TGG 0.557525 8.1:-60603466 MS.gene77800:CDS
CACTCTGACTGAGAACAAGA+TGG 0.558857 8.1:-60602975 MS.gene77800:CDS
ATGATCCAAATGGCTGATGT+TGG 0.559216 8.1:-60601021 MS.gene77800:CDS
TCAATATTATGGATGGGGAG+TGG 0.560880 8.1:-60603218 MS.gene77800:CDS
ACTGTAGATATAGCAAGTAT+GGG 0.561451 8.1:-60600355 MS.gene77800:CDS
TAATCTATCAGCTTGACTGT+AGG 0.565808 8.1:+60602534 None:intergenic
AAGAATACTAATTGTGTGGT+TGG 0.566670 8.1:-60603484 MS.gene77800:CDS
ATATGGATTTCAGGCTACAA+TGG 0.568671 8.1:-60603569 MS.gene77800:CDS
TCAAGCTGATAGATTATCAA+GGG 0.569002 8.1:-60602527 MS.gene77800:CDS
ATGACTCTAGCCATCGGAGA+TGG 0.569025 8.1:-60601238 MS.gene77800:intron
TTACCAACGACTAGGCTACA+TGG 0.572195 8.1:-60600890 MS.gene77800:CDS
TTGCAGGGCTATCTTTGATG+TGG 0.575261 8.1:-60599366 MS.gene77800:intron
TATGCAGGTTCAATGTCTTG+GGG 0.575323 8.1:-60602148 MS.gene77800:intron
TGATAGTGAACTGGAAGAAG+AGG 0.576970 8.1:-60601451 MS.gene77800:intron
AGTCCACCTGATTACATCCA+TGG 0.578614 8.1:+60600285 None:intergenic
ATTGAGTCTCTAAGGAAAGC+CGG 0.578620 8.1:-60601744 MS.gene77800:CDS
AAATCAGTGATGAAGATGCT+AGG 0.579456 8.1:-60604170 MS.gene77800:CDS
AGTTATCAATATTATGGATG+GGG 0.580201 8.1:-60603223 MS.gene77800:CDS
CTCTATAAGCATAAAACCAT+AGG 0.580922 8.1:+60602464 None:intergenic
CTGTAGATATAGCAAGTATG+GGG 0.581531 8.1:-60600354 MS.gene77800:CDS
TAGCTCCGTTGCAAAAGGCT+GGG 0.582525 8.1:-60601294 MS.gene77800:CDS
TCAAGACGGCTCCTCTTAGA+CGG 0.582988 8.1:+60603406 None:intergenic
AACGCTTTGCCATAACGTAT+CGG 0.583942 8.1:+60600417 None:intergenic
TATAGCTGTTGTCAAAGTGA+AGG 0.584322 8.1:+60600612 None:intergenic
CAAATGGCTGATGTTGGGGT+TGG 0.584450 8.1:-60601015 MS.gene77800:CDS
TTCTGGTAGAAATTCAACTA+GGG 0.587363 8.1:-60604283 MS.gene77800:CDS
GAATTCAAGATTTCAGTGTA+GGG 0.587595 8.1:-60603056 MS.gene77800:CDS
GTTCCTCTCTTATTTGTACA+CGG 0.589784 8.1:-60600922 MS.gene77800:CDS
AAAGCTATGCTCAATAACTC+AGG 0.590314 8.1:-60603433 MS.gene77800:CDS
GTTCTGGTAGAAATTCAACT+AGG 0.591194 8.1:-60604284 MS.gene77800:CDS
AGTTCATTTGTGTCTCAAGA+CGG 0.592225 8.1:+60603392 None:intergenic
TTAAGTTTCACGAAAAGGAG+AGG 0.592804 8.1:-60603633 MS.gene77800:CDS
TATCAGCTTGACTGTAGGGT+CGG 0.595910 8.1:+60602539 None:intergenic
TTTCAATGCGCTAGTATTTG+GGG 0.596349 8.1:-60602950 MS.gene77800:CDS
TTTCTCATGCATCCATTTGG+GGG 0.597711 8.1:-60600258 MS.gene77800:CDS
CGGTAGCGCCCAATATGCAT+AGG 0.597956 8.1:+60601805 None:intergenic
CACTGGAATTACCAACGACT+AGG 0.598882 8.1:-60600898 MS.gene77800:CDS
AAGTACTTCTATGATTGGTA+GGG 0.600513 8.1:-60601868 MS.gene77800:CDS
GATCCAAATGGCTGATGTTG+GGG 0.600913 8.1:-60601019 MS.gene77800:CDS
AAAGAATGTCTGTTATATTG+GGG 0.603285 8.1:-60602100 MS.gene77800:CDS
AGGATATCGGGATCATAACC+TGG 0.604549 8.1:+60603158 None:intergenic
AAGCATAAAACCATAGGCAG+CGG 0.609256 8.1:+60602470 None:intergenic
ACTTTGAAGAATTCTCAGAT+GGG 0.609588 8.1:+60604343 None:intergenic
CCATCAATAATCAACGCCAT+AGG 0.614847 8.1:+60601495 None:intergenic
CGAGAAGTTTGAGAATAGAA+GGG 0.615333 8.1:-60599219 MS.gene77800:CDS
GCACCATGTAGCCTAGTCGT+TGG 0.617009 8.1:+60600887 None:intergenic
TCGGATGTGTCAACAACAAG+AGG 0.617316 8.1:+60602558 None:intergenic
TACCAGTAACCATGAAGTGA+TGG 0.617533 8.1:+60600190 None:intergenic
ACAAGAAGAACAAAAGCCAA+TGG 0.621288 8.1:+60603937 None:intergenic
TCGTCAAAGCTACTAACAAG+TGG 0.621738 8.1:-60601663 MS.gene77800:CDS
TGGATTTCAGGCTACAATGG+AGG 0.622974 8.1:-60603566 MS.gene77800:CDS
AAGCTCCATAGAAATGTACA+AGG 0.624504 8.1:+60603138 None:intergenic
TGAACATACGCAACACCGGT+AGG 0.626091 8.1:+60603718 None:intergenic
TTTGGTCTCAGTGAATGGAA+AGG 0.626806 8.1:-60602712 MS.gene77800:intron
AGAAGAATAAGAGTGAAGAT+GGG 0.633351 8.1:+60601974 None:intergenic
TCCGATGGCTAGAGTCATGT+CGG 0.637075 8.1:+60601243 None:intergenic
GATGGAAAGAGATTGTCACT+TGG 0.637955 8.1:-60603541 MS.gene77800:CDS
CTTCCCCAATATGCAAAGAG+AGG 0.638044 8.1:+60600379 None:intergenic
ATCAATCATTATGTGACCTG+AGG 0.639691 8.1:+60602437 None:intergenic
CTGCAGTTTATCTTCAATAG+CGG 0.645080 8.1:+60601785 None:intergenic
AGATACCATACCATCTCCGA+TGG 0.645447 8.1:+60601228 None:intergenic
AGATTCTAGATTGTATGATG+AGG 0.647520 8.1:-60603083 MS.gene77800:CDS
CAAACATAACCAGAATAATG+TGG 0.654557 8.1:+60599337 None:intergenic
CTCTCTCGTAAAGAATAGGA+CGG 0.658957 8.1:-60601266 MS.gene77800:CDS
GCCGACATGACTCTAGCCAT+CGG 0.659172 8.1:-60601244 MS.gene77800:CDS
ATATTCTTGGAGAACAACAA+AGG 0.660993 8.1:-60602416 MS.gene77800:intron
TGGCCATGGATGTAATCAGG+TGG 0.664998 8.1:-60600288 MS.gene77800:CDS
TTGTCGACGAGTGATCCTAC+CGG 0.666383 8.1:-60603733 MS.gene77800:CDS
TGTCCAGCCCCATAAAGCTG+AGG 0.666629 8.1:+60600484 None:intergenic
TAAAGTATGGGTGTTGACTG+GGG 0.668570 8.1:-60601718 MS.gene77800:CDS
TACTCGACAACAAAGAACAA+CGG 0.673269 8.1:+60601315 None:intergenic
AGTTTGAACATACGCAACAC+CGG 0.674253 8.1:+60603714 None:intergenic
ACTTAAGAATACTAATTGTG+TGG 0.675064 8.1:-60603488 MS.gene77800:CDS
TGTCCGTGTACAAATAAGAG+AGG 0.679867 8.1:+60600919 None:intergenic
ACAAACTTTACAACAAAACG+TGG 0.683285 8.1:+60599287 None:intergenic
TGGGGCTGGACAAAGACAAG+AGG 0.684412 8.1:-60600473 MS.gene77800:CDS
ATTGAAGATAAACTGCAGCA+AGG 0.685229 8.1:-60601780 MS.gene77800:CDS
GACAACAAAACAAAATCACA+AGG 0.688219 8.1:+60603751 None:intergenic
CAAGCTGATAGATTATCAAG+GGG 0.688461 8.1:-60602526 MS.gene77800:CDS
GGTAAACTATAACCGACATG+AGG 0.690892 8.1:+60603179 None:intergenic
TGTAGATATAGCAAGTATGG+GGG 0.698937 8.1:-60600353 MS.gene77800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATTTTATTATGTTTTAAAA+TGG - chr8.1:60603492-60603511 MS.gene77800:CDS 10.0%
!! TATAACATGGTTATAAAAAA+CGG - chr8.1:60603704-60603723 MS.gene77800:CDS 15.0%
!! AAAAGAATGTCTGTTATATT+GGG - chr8.1:60601422-60601441 MS.gene77800:intron 20.0%
!! AAAGTTATCAATATTATGGA+TGG - chr8.1:60600298-60600317 MS.gene77800:CDS 20.0%
!! AAATCCAATTTCCTATAATA+AGG + chr8.1:60600261-60600280 None:intergenic 20.0%
!! AAATGTAATTTATACGTAGA+TGG - chr8.1:60603769-60603788 MS.gene77800:CDS 20.0%
!! AACATAAAAATATCTGTTTG+GGG + chr8.1:60601176-60601195 None:intergenic 20.0%
!! AAGTTATCAATATTATGGAT+GGG - chr8.1:60600299-60600318 MS.gene77800:CDS 20.0%
!! AATAATGAGAACAAAATACA+AGG - chr8.1:60602353-60602372 MS.gene77800:intron 20.0%
!! AATCCATATATATTCCTATT+CGG + chr8.1:60599943-60599962 None:intergenic 20.0%
!! ATTACCTTATTATAGGAAAT+TGG - chr8.1:60600254-60600273 MS.gene77800:CDS 20.0%
!! CAACATAAAAATATCTGTTT+GGG + chr8.1:60601177-60601196 None:intergenic 20.0%
!! GATTAAGTATAGCAATTATA+AGG + chr8.1:60599522-60599541 None:intergenic 20.0%
!! TAAATCTTCATTGATATTCA+AGG + chr8.1:60600493-60600512 None:intergenic 20.0%
!! TCAACATAAAAATATCTGTT+TGG + chr8.1:60601178-60601197 None:intergenic 20.0%
!! TGAATATCAATGAAGATTTA+GGG - chr8.1:60600493-60600512 MS.gene77800:CDS 20.0%
!! TTGAATATCAATGAAGATTT+AGG - chr8.1:60600492-60600511 MS.gene77800:CDS 20.0%
!!! AGTTATAAAAGAGTATTTTC+CGG + chr8.1:60599446-60599465 None:intergenic 20.0%
!!! ATTTTGTTCTCATTATTTGA+AGG + chr8.1:60602350-60602369 None:intergenic 20.0%
!!! CATATTTTTGTGTTGTTATT+TGG - chr8.1:60600793-60600812 MS.gene77800:intron 20.0%
!!! GTTTTTTATAACCATGTTAT+AGG + chr8.1:60603705-60603724 None:intergenic 20.0%
!!! TTTTGTTCTCATTATTTGAA+GGG + chr8.1:60602349-60602368 None:intergenic 20.0%
! AAAACAAAATCACAAGGAAT+CGG + chr8.1:60599769-60599788 None:intergenic 25.0%
! AAACCGAATAGGAATATATA+TGG - chr8.1:60599937-60599956 MS.gene77800:intron 25.0%
! AAAGAATGTCTGTTATATTG+GGG - chr8.1:60601423-60601442 MS.gene77800:intron 25.0%
! AAATGGAAAGATATTAGAGT+TGG - chr8.1:60599715-60599734 MS.gene77800:intron 25.0%
! ACTTAAGAATACTAATTGTG+TGG - chr8.1:60600035-60600054 MS.gene77800:intron 25.0%
! AGAAAATAACCTATGCATAT+TGG - chr8.1:60601709-60601728 MS.gene77800:CDS 25.0%
! AGTTATCAATATTATGGATG+GGG - chr8.1:60600300-60600319 MS.gene77800:CDS 25.0%
! ATAGAAATGTACAAGGATAT+CGG + chr8.1:60600381-60600400 None:intergenic 25.0%
! ATAGATTAGTACTCGTTAAT+TGG - chr8.1:60603658-60603677 MS.gene77800:CDS 25.0%
! ATTGAATACAGACATAATAC+AGG - chr8.1:60601517-60601536 MS.gene77800:CDS 25.0%
! CACATAATGATTGATATTCT+TGG - chr8.1:60601094-60601113 MS.gene77800:intron 25.0%
! CACTATCAAGAATATATACA+AGG + chr8.1:60602060-60602079 None:intergenic 25.0%
! CATAAAAAAAGGACTACTTT+GGG + chr8.1:60601337-60601356 None:intergenic 25.0%
! GAAAAGAATGTCTGTTATAT+TGG - chr8.1:60601421-60601440 MS.gene77800:intron 25.0%
! GAAAATAACCTATGCATATT+GGG - chr8.1:60601710-60601729 MS.gene77800:CDS 25.0%
! GAGGAAAGTTATCAATATTA+TGG - chr8.1:60600294-60600313 MS.gene77800:CDS 25.0%
! TAGGAATATATATGGATTTC+AGG - chr8.1:60599945-60599964 MS.gene77800:intron 25.0%
! TCATAAAAAAAGGACTACTT+TGG + chr8.1:60601338-60601357 None:intergenic 25.0%
! TGAATCGATTACCTTATTAT+AGG - chr8.1:60600247-60600266 MS.gene77800:CDS 25.0%
!! CCTACAACAAAAAATTGTTT+TGG - chr8.1:60603073-60603092 MS.gene77800:CDS 25.0%
!! CTTTTATAACTTTTCTTCCT+AGG - chr8.1:60599455-60599474 MS.gene77800:intron 25.0%
!! GACTATTTCGATAGTTATTT+TGG - chr8.1:60603200-60603219 MS.gene77800:CDS 25.0%
!! TCAATTTAAGTTTCACGAAA+AGG - chr8.1:60599885-60599904 MS.gene77800:intron 25.0%
!! TTATTCTGGTTATGTTTGTT+TGG - chr8.1:60604191-60604210 MS.gene77800:CDS 25.0%
!! TTTATGAATGCTCTCATTTT+GGG - chr8.1:60601351-60601370 MS.gene77800:intron 25.0%
!! TTTTATGAATGCTCTCATTT+TGG - chr8.1:60601350-60601369 MS.gene77800:intron 25.0%
!!! AGGAAATTGGATTTTTCAAA+GGG - chr8.1:60600267-60600286 MS.gene77800:CDS 25.0%
!!! ATATATTCTTGATAGTGAAC+TGG - chr8.1:60602063-60602082 MS.gene77800:CDS 25.0%
!!! ATGAGAGCATTCATAAAAAA+AGG + chr8.1:60601348-60601367 None:intergenic 25.0%
!!! ATTGATTTTTCCATCCATAA+AGG + chr8.1:60603827-60603846 None:intergenic 25.0%
!!! CCAAAACAATTTTTTGTTGT+AGG + chr8.1:60603076-60603095 None:intergenic 25.0%
!!! CTGTTAATGGTTTTGTATTA+AGG - chr8.1:60601222-60601241 MS.gene77800:intron 25.0%
!!! TAGGAAATTGGATTTTTCAA+AGG - chr8.1:60600266-60600285 MS.gene77800:CDS 25.0%
!!! TTAGAATGATTTGCTGTTAA+TGG - chr8.1:60601209-60601228 MS.gene77800:intron 25.0%
AAAATGGCAACAACAATAGT+TGG + chr8.1:60602982-60603001 None:intergenic 30.0%
AAAGTTGAGAACAATAGGTT+AGG - chr8.1:60599658-60599677 MS.gene77800:intron 30.0%
AAATACAAGGACAGAGAAAA+TGG - chr8.1:60602366-60602385 MS.gene77800:intron 30.0%
AACTGTTCAAACAAATTCCT+AGG + chr8.1:60599475-60599494 None:intergenic 30.0%
AAGAATACTAATTGTGTGGT+TGG - chr8.1:60600039-60600058 MS.gene77800:intron 30.0%
AAGTACTTCTATGATTGGTA+GGG - chr8.1:60601655-60601674 MS.gene77800:CDS 30.0%
AATCTCTCATTTGTTCTATC+AGG + chr8.1:60599397-60599416 None:intergenic 30.0%
AATGAGAGATTTGAATTTGC+AGG - chr8.1:60599406-60599425 MS.gene77800:intron 30.0%
ACAAACTTTACAACAAAACG+TGG + chr8.1:60604239-60604258 None:intergenic 30.0%
ACTAAGATCCTTGTCAAAAA+TGG + chr8.1:60602998-60603017 None:intergenic 30.0%
ACTGTAGATATAGCAAGTAT+GGG - chr8.1:60603168-60603187 MS.gene77800:CDS 30.0%
AGAAGAATAAGAGTGAAGAT+GGG + chr8.1:60601552-60601571 None:intergenic 30.0%
AGAATCTTTGATCATGAAGT+AGG + chr8.1:60600427-60600446 None:intergenic 30.0%
AGATTCTAGATTGTATGATG+AGG - chr8.1:60600440-60600459 MS.gene77800:CDS 30.0%
ATATTCTTGGAGAACAACAA+AGG - chr8.1:60601107-60601126 MS.gene77800:intron 30.0%
ATCAAGAATATATACAAGGC+TGG + chr8.1:60602056-60602075 None:intergenic 30.0%
ATCTTACAAGTCAACTTTGT+AGG - chr8.1:60603916-60603935 MS.gene77800:CDS 30.0%
ATGAGAGATTTGAATTTGCA+GGG - chr8.1:60599407-60599426 MS.gene77800:intron 30.0%
ATGCTTCAGAATTTGATCAA+TGG - chr8.1:60601612-60601631 MS.gene77800:CDS 30.0%
ATTTGAATTTGCAGGGAATT+CGG - chr8.1:60599414-60599433 MS.gene77800:intron 30.0%
CAAACATAACCAGAATAATG+TGG + chr8.1:60604189-60604208 None:intergenic 30.0%
CAGATAAAGTTGAGAACAAT+AGG - chr8.1:60599653-60599672 MS.gene77800:intron 30.0%
CTCTATAAGCATAAAACCAT+AGG + chr8.1:60601062-60601081 None:intergenic 30.0%
GAATTCAAGATTTCAGTGTA+GGG - chr8.1:60600467-60600486 MS.gene77800:CDS 30.0%
GACAACAAAACAAAATCACA+AGG + chr8.1:60599775-60599794 None:intergenic 30.0%
GATATCCTTGTACATTTCTA+TGG - chr8.1:60600380-60600399 MS.gene77800:CDS 30.0%
GTAATTTATACGTAGATGGA+AGG - chr8.1:60603773-60603792 MS.gene77800:CDS 30.0%
GTCATTTCATAGAGAAGAAA+TGG - chr8.1:60599698-60599717 MS.gene77800:intron 30.0%
GTTCAAACTCTTAATCTAGA+TGG - chr8.1:60599823-60599842 MS.gene77800:intron 30.0%
TAACGAGTACTAATCTATGT+CGG + chr8.1:60603656-60603675 None:intergenic 30.0%
TAGAAATGTACAAGGATATC+GGG + chr8.1:60600380-60600399 None:intergenic 30.0%
TCAAGCTGATAGATTATCAA+GGG - chr8.1:60600996-60601015 MS.gene77800:CDS 30.0%
TCTTACAAGTCAACTTTGTA+GGG - chr8.1:60603917-60603936 MS.gene77800:CDS 30.0%
TCTTGAAATCTGAATATCGT+CGG + chr8.1:60604279-60604298 None:intergenic 30.0%
TGACAACAGCTATAAATGAA+TGG - chr8.1:60602920-60602939 MS.gene77800:CDS 30.0%
TTCAATTCCTAACTCATGTA+TGG - chr8.1:60603573-60603592 MS.gene77800:CDS 30.0%
TTCTGGTAGAAATTCAACTA+GGG - chr8.1:60599240-60599259 MS.gene77800:CDS 30.0%
TTGACAAGGATCTTAGTAAA+AGG - chr8.1:60603001-60603020 MS.gene77800:CDS 30.0%
! AACTTTGAAGAATTCTCAGA+TGG + chr8.1:60599184-60599203 None:intergenic 30.0%
! ACTTTGAAGAATTCTCAGAT+GGG + chr8.1:60599183-60599202 None:intergenic 30.0%
! TATATTGAAGGAAGTTCTGA+TGG - chr8.1:60601992-60602011 MS.gene77800:CDS 30.0%
! TATGTCTTTTCAGACAAAAC+TGG - chr8.1:60600525-60600544 MS.gene77800:CDS 30.0%
! TCTTTGTGCTAATTCTGTTT+TGG - chr8.1:60602683-60602702 MS.gene77800:CDS 30.0%
! TTAACTTTCACCCTCATTTT+TGG + chr8.1:60600845-60600864 None:intergenic 30.0%
!! CAAAGTTGACTTGTAAGATA+AGG + chr8.1:60603915-60603934 None:intergenic 30.0%
!! TGCATGAATTTGATAGTGAT+CGG - chr8.1:60601399-60601418 MS.gene77800:intron 30.0%
!! TGTTTCTATCCTAGTCTTAT+TGG - chr8.1:60603976-60603995 MS.gene77800:CDS 30.0%
!!! TATTTTGGTCAATTTGCACT+TGG - chr8.1:60603215-60603234 MS.gene77800:CDS 30.0%
!!! TTAGGATTGGTTTTGGTTAA+TGG - chr8.1:60599676-60599695 MS.gene77800:intron 30.0%
AAAGCTATGCTCAATAACTC+AGG - chr8.1:60600090-60600109 MS.gene77800:intron 35.0%
AAATCAGTGATGAAGATGCT+AGG - chr8.1:60599353-60599372 MS.gene77800:CDS 35.0%
AACGAGTACTAATCTATGTC+GGG + chr8.1:60603655-60603674 None:intergenic 35.0%
AAGCTCCATAGAAATGTACA+AGG + chr8.1:60600388-60600407 None:intergenic 35.0%
AATAAGTCTACGTTGGATAG+TGG - chr8.1:60603854-60603873 MS.gene77800:CDS 35.0%
AATCTATCAGCTTGACTGTA+GGG + chr8.1:60600991-60601010 None:intergenic 35.0%
ACAAGAAGAACAAAAGCCAA+TGG + chr8.1:60599589-60599608 None:intergenic 35.0%
ACATGTGTACAAAACTTTGC+AGG - chr8.1:60604141-60604160 MS.gene77800:CDS 35.0%
ACCTGTAAGATATGGATCAA+AGG - chr8.1:60599291-60599310 MS.gene77800:CDS 35.0%
ACTATTTAAGCCATCCAATG+TGG + chr8.1:60604062-60604081 None:intergenic 35.0%
AGTTCATTTGTGTCTCAAGA+CGG + chr8.1:60600134-60600153 None:intergenic 35.0%
AGTTTCAATGCGCTAGTATT+TGG - chr8.1:60600571-60600590 MS.gene77800:CDS 35.0%
ATATGGATTTCAGGCTACAA+TGG - chr8.1:60599954-60599973 MS.gene77800:intron 35.0%
ATCAATCATTATGTGACCTG+AGG + chr8.1:60601089-60601108 None:intergenic 35.0%
ATGTATGGAGAAAACTCTGT+TGG - chr8.1:60603588-60603607 MS.gene77800:CDS 35.0%
ATTGAAGATAAACTGCAGCA+AGG - chr8.1:60601743-60601762 MS.gene77800:CDS 35.0%
ATTTCTCATGCATCCATTTG+GGG - chr8.1:60603264-60603283 MS.gene77800:CDS 35.0%
CAACACCCATACTTTAATAC+CGG + chr8.1:60601801-60601820 None:intergenic 35.0%
CAAGAAACTGCCATATCAAT+TGG - chr8.1:60601833-60601852 MS.gene77800:CDS 35.0%
CAAGCTGATAGATTATCAAG+GGG - chr8.1:60600997-60601016 MS.gene77800:CDS 35.0%
CAAGTACTTCTATGATTGGT+AGG - chr8.1:60601654-60601673 MS.gene77800:CDS 35.0%
CACTGTAGATATAGCAAGTA+TGG - chr8.1:60603167-60603186 MS.gene77800:CDS 35.0%
CAGAAGAATAAGAGTGAAGA+TGG + chr8.1:60601553-60601572 None:intergenic 35.0%
CATGTGTACAAAACTTTGCA+GGG - chr8.1:60604142-60604161 MS.gene77800:CDS 35.0%
CCAACGTAGACTTATTTAAG+AGG + chr8.1:60603850-60603869 None:intergenic 35.0%
CCTCTTAAATAAGTCTACGT+TGG - chr8.1:60603847-60603866 MS.gene77800:CDS 35.0%
CCTGTAAGATATGGATCAAA+GGG - chr8.1:60599292-60599311 MS.gene77800:CDS 35.0%
CGAATTCAAGATTTCAGTGT+AGG - chr8.1:60600466-60600485 MS.gene77800:CDS 35.0%
CGAGAAGTTTGAGAATAGAA+GGG - chr8.1:60604304-60604323 MS.gene77800:CDS 35.0%
CGATGTATCAATGATCCAAA+TGG - chr8.1:60602492-60602511 MS.gene77800:CDS 35.0%
CTGCAGTTTATCTTCAATAG+CGG + chr8.1:60601741-60601760 None:intergenic 35.0%
CTGTAGATATAGCAAGTATG+GGG - chr8.1:60603169-60603188 MS.gene77800:CDS 35.0%
CTTATGCGATTAGCAAAAAG+TGG - chr8.1:60600872-60600891 MS.gene77800:CDS 35.0%
CTTCACTCTTATTCTTCTGT+GGG - chr8.1:60601554-60601573 MS.gene77800:CDS 35.0%
CTTGAAATCTGAATATCGTC+GGG + chr8.1:60604278-60604297 None:intergenic 35.0%
CTTTCTCCTTCATGTGTTAT+AGG - chr8.1:60602463-60602482 MS.gene77800:CDS 35.0%
GAAAGCCGGTATTAAAGTAT+GGG - chr8.1:60601793-60601812 MS.gene77800:CDS 35.0%
GATACTTCGTACCTATAACA+TGG - chr8.1:60603691-60603710 MS.gene77800:CDS 35.0%
GATTTCTCATGCATCCATTT+GGG - chr8.1:60603263-60603282 MS.gene77800:CDS 35.0%
GTCAAGCTGATAGATTATCA+AGG - chr8.1:60600995-60601014 MS.gene77800:CDS 35.0%
GTGAGTCTAATTTGAAGACT+AGG - chr8.1:60599845-60599864 MS.gene77800:intron 35.0%
GTTCTGGTAGAAATTCAACT+AGG - chr8.1:60599239-60599258 MS.gene77800:CDS 35.0%
GTTTCAATGCGCTAGTATTT+GGG - chr8.1:60600572-60600591 MS.gene77800:CDS 35.0%
TAAAGCAGTTGAAGGAGTTA+AGG + chr8.1:60601299-60601318 None:intergenic 35.0%
TAATCTATCAGCTTGACTGT+AGG + chr8.1:60600992-60601011 None:intergenic 35.0%
TACTCGACAACAAAGAACAA+CGG + chr8.1:60602211-60602230 None:intergenic 35.0%
TATAGCTGTTGTCAAAGTGA+AGG + chr8.1:60602914-60602933 None:intergenic 35.0%
TCATCATCAAGAAGAAGTTC+TGG - chr8.1:60599223-60599242 MS.gene77800:CDS 35.0%
TCCTCGAATATTGTACTTAG+AGG - chr8.1:60600006-60600025 MS.gene77800:intron 35.0%
TCCTCTAAGTACAATATTCG+AGG + chr8.1:60600010-60600029 None:intergenic 35.0%
TCGAGAAGTTTGAGAATAGA+AGG - chr8.1:60604303-60604322 MS.gene77800:CDS 35.0%
TCTTCACTCTTATTCTTCTG+TGG - chr8.1:60601553-60601572 MS.gene77800:CDS 35.0%
TGAAAGATGCATATGAGGAT+TGG - chr8.1:60599617-60599636 MS.gene77800:intron 35.0%
TGAGAACAATAGGTTAGGAT+TGG - chr8.1:60599663-60599682 MS.gene77800:intron 35.0%
TGATCCATATCTTACAGGTT+TGG + chr8.1:60599290-60599309 None:intergenic 35.0%
TGTAGATATAGCAAGTATGG+GGG - chr8.1:60603170-60603189 MS.gene77800:CDS 35.0%
TGTATGGAGAAAACTCTGTT+GGG - chr8.1:60603589-60603608 MS.gene77800:CDS 35.0%
TGTTCCAAATGTTCAATCCT+AGG - chr8.1:60604012-60604031 MS.gene77800:CDS 35.0%
TGTTCCTCTCTTTGCATATT+GGG - chr8.1:60603140-60603159 MS.gene77800:CDS 35.0%
TTAAGTTTCACGAAAAGGAG+AGG - chr8.1:60599890-60599909 MS.gene77800:intron 35.0%
TTACGATTTCTTTCTTGCAC+TGG - chr8.1:60600922-60600941 MS.gene77800:CDS 35.0%
TTAGCACCTATAACACATGA+AGG + chr8.1:60602472-60602491 None:intergenic 35.0%
TTAGTACTCGTTAATTGGTG+TGG - chr8.1:60603663-60603682 MS.gene77800:CDS 35.0%
TTGCAAGCAAAGATGGAAAA+CGG - chr8.1:60600897-60600916 MS.gene77800:CDS 35.0%
TTGTCTCTCTCGTAAAGAAT+AGG - chr8.1:60602253-60602272 MS.gene77800:intron 35.0%
TTGTTCCTCTCTTTGCATAT+TGG - chr8.1:60603139-60603158 MS.gene77800:CDS 35.0%
TTTCAATGCGCTAGTATTTG+GGG - chr8.1:60600573-60600592 MS.gene77800:CDS 35.0%
TTTGAGAATAGAAGGGTCAA+TGG - chr8.1:60604311-60604330 MS.gene77800:CDS 35.0%
! AATGGCTTCAGATTTTGCAA+TGG - chr8.1:60602561-60602580 MS.gene77800:CDS 35.0%
! AGGTGTATCAATTTTGCCAT+TGG - chr8.1:60599570-60599589 MS.gene77800:intron 35.0%
! ATGGCTTCAGATTTTGCAAT+GGG - chr8.1:60602562-60602581 MS.gene77800:CDS 35.0%
! ATGTGTTGATAGATCTCAGA+TGG - chr8.1:60602096-60602115 MS.gene77800:CDS 35.0%
! ATTCAACTTGCTCATTCTCA+AGG + chr8.1:60600626-60600645 None:intergenic 35.0%
! CAAGTTGAATACTCTCTTCA+AGG - chr8.1:60600636-60600655 MS.gene77800:intron 35.0%
! GGAAAAGAGAGAAAAAGCAT+CGG - chr8.1:60602387-60602406 MS.gene77800:intron 35.0%
! GTTCCTCTCTTATTTGTACA+CGG - chr8.1:60602601-60602620 MS.gene77800:CDS 35.0%
! GTTTTCTCCATACATGAGTT+AGG + chr8.1:60603583-60603602 None:intergenic 35.0%
! TGTTATTTGGTCTCAGTGAA+TGG - chr8.1:60600806-60600825 MS.gene77800:intron 35.0%
!! ATTAAAGTATGGGTGTTGAC+TGG - chr8.1:60601803-60601822 MS.gene77800:CDS 35.0%
!! GGATTTTTCAAAGGGAAAAG+AGG - chr8.1:60600275-60600294 MS.gene77800:CDS 35.0%
!! TACTTTGGGACCTAATTCAA+GGG + chr8.1:60601323-60601342 None:intergenic 35.0%
!! TTAAAGTATGGGTGTTGACT+GGG - chr8.1:60601804-60601823 MS.gene77800:CDS 35.0%
!! TTACCTCAACTAGCTGTTTT+TGG - chr8.1:60599544-60599563 MS.gene77800:intron 35.0%
!!! CAATAGGTTAGGATTGGTTT+TGG - chr8.1:60599669-60599688 MS.gene77800:intron 35.0%
!!! TGTTGTTGCCATTTTTGACA+AGG - chr8.1:60602987-60603006 MS.gene77800:CDS 35.0%
!!! TTTGTGGCTTTTAAGATGCA+TGG - chr8.1:60602822-60602841 MS.gene77800:intron 35.0%
AAAAAATGTAGCTGCACCTG+AGG - chr8.1:60601961-60601980 MS.gene77800:CDS 40.0%
AACGCTTTGCCATAACGTAT+CGG + chr8.1:60603109-60603128 None:intergenic 40.0%
AAGATGCATATGAGGATTGG+AGG - chr8.1:60599620-60599639 MS.gene77800:intron 40.0%
AAGCATAAAACCATAGGCAG+CGG + chr8.1:60601056-60601075 None:intergenic 40.0%
AATTTGCAGGGAATTCGGTT+CGG - chr8.1:60599419-60599438 MS.gene77800:intron 40.0%
ACGAGTACTAATCTATGTCG+GGG + chr8.1:60603654-60603673 None:intergenic 40.0%
ACTGCTTTAGCCCTTGAATT+AGG - chr8.1:60601310-60601329 MS.gene77800:CDS 40.0%
AGGTCTTGAAGCCAAAAATG+AGG - chr8.1:60600831-60600850 MS.gene77800:intron 40.0%
AGTTTGAACATACGCAACAC+CGG + chr8.1:60599812-60599831 None:intergenic 40.0%
ATCCAACGCTGTAAAACACA+AGG - chr8.1:60603378-60603397 MS.gene77800:CDS 40.0%
ATGATCCAAATGGCTGATGT+TGG - chr8.1:60602502-60602521 MS.gene77800:CDS 40.0%
ATTGGGGTGCAATGACAATT+CGG - chr8.1:60601439-60601458 MS.gene77800:intron 40.0%
CAAGCCTAGGATTGAACATT+TGG + chr8.1:60604019-60604038 None:intergenic 40.0%
CACTGCTAATCCTTTATGGA+TGG - chr8.1:60603814-60603833 MS.gene77800:CDS 40.0%
CAGAAGCTATTGAGTCTCTA+AGG - chr8.1:60601771-60601790 MS.gene77800:CDS 40.0%
CCATCAATAATCAACGCCAT+AGG + chr8.1:60602031-60602050 None:intergenic 40.0%
CCCTTTGATCCATATCTTAC+AGG + chr8.1:60599295-60599314 None:intergenic 40.0%
CGCAACTTTCATATGTGTCA+TGG - chr8.1:60603296-60603315 MS.gene77800:CDS 40.0%
CTACCAAAAACAGCTAGTTG+AGG + chr8.1:60599550-60599569 None:intergenic 40.0%
CTATGCAGGTTCAATGTCTT+GGG - chr8.1:60601374-60601393 MS.gene77800:intron 40.0%
CTCTCTCGTAAAGAATAGGA+CGG - chr8.1:60602257-60602276 MS.gene77800:intron 40.0%
CTTAGAGACTCAATAGCTTC+TGG + chr8.1:60601773-60601792 None:intergenic 40.0%
CTTATTCTTCTGTGGGTTTG+AGG - chr8.1:60601561-60601580 MS.gene77800:CDS 40.0%
GAGGTTGGCAACTATATTGA+AGG - chr8.1:60601980-60601999 MS.gene77800:CDS 40.0%
GAGTCCAAACCTGTAAGATA+TGG - chr8.1:60599283-60599302 MS.gene77800:CDS 40.0%
GATGCACTGCTAATCCTTTA+TGG - chr8.1:60603810-60603829 MS.gene77800:CDS 40.0%
GATGCTATACCATCACTTCA+TGG - chr8.1:60603324-60603343 MS.gene77800:CDS 40.0%
GATGGAAAGAGATTGTCACT+TGG - chr8.1:60599982-60600001 MS.gene77800:intron 40.0%
GCAGCAAGTACTTCTATGAT+TGG - chr8.1:60601650-60601669 MS.gene77800:CDS 40.0%
GCATGCATGACATGACTAAT+TGG + chr8.1:60603432-60603451 None:intergenic 40.0%
GGAAAGCCGGTATTAAAGTA+TGG - chr8.1:60601792-60601811 MS.gene77800:CDS 40.0%
GGATTTCTCATGCATCCATT+TGG - chr8.1:60603262-60603281 MS.gene77800:CDS 40.0%
GGTAAACTATAACCGACATG+AGG + chr8.1:60600347-60600366 None:intergenic 40.0%
GGTCTTGAAGCCAAAAATGA+GGG - chr8.1:60600832-60600851 MS.gene77800:intron 40.0%
GTATGGAGAAAACTCTGTTG+GGG - chr8.1:60603590-60603609 MS.gene77800:CDS 40.0%
GTTCCTCTCTTTGCATATTG+GGG - chr8.1:60603141-60603160 MS.gene77800:CDS 40.0%
TACCAGTAACCATGAAGTGA+TGG + chr8.1:60603336-60603355 None:intergenic 40.0%
TACCATCACTTCATGGTTAC+TGG - chr8.1:60603331-60603350 MS.gene77800:CDS 40.0%
TATGCAGGTTCAATGTCTTG+GGG - chr8.1:60601375-60601394 MS.gene77800:intron 40.0%
TATGTCAACGCTTGTTCATC+TGG + chr8.1:60601028-60601047 None:intergenic 40.0%
TCAATATAGTTGCCAACCTC+AGG + chr8.1:60601980-60601999 None:intergenic 40.0%
TCAATATTATGGATGGGGAG+TGG - chr8.1:60600305-60600324 MS.gene77800:CDS 40.0%
TCGTCAAAGCTACTAACAAG+TGG - chr8.1:60601860-60601879 MS.gene77800:CDS 40.0%
TGACGAGTAGCCAATTGATA+TGG + chr8.1:60601846-60601865 None:intergenic 40.0%
TGATCCAAATGGCTGATGTT+GGG - chr8.1:60602503-60602522 MS.gene77800:CDS 40.0%
TGCTGTGAAAGATGCATATG+AGG - chr8.1:60599612-60599631 MS.gene77800:intron 40.0%
TGTCCGTGTACAAATAAGAG+AGG + chr8.1:60602607-60602626 None:intergenic 40.0%
TTAAAAGCCACAAAGAGCGA+TGG + chr8.1:60602816-60602835 None:intergenic 40.0%
TTAAGTGCGAGAAACCGAAT+AGG - chr8.1:60599926-60599945 MS.gene77800:intron 40.0%
TTCAATCCTAGGCTTGAGAA+GGG - chr8.1:60604023-60604042 MS.gene77800:CDS 40.0%
TTTCTCATGCATCCATTTGG+GGG - chr8.1:60603265-60603284 MS.gene77800:CDS 40.0%
TTTGGTCTCAGTGAATGGAA+AGG - chr8.1:60600811-60600830 MS.gene77800:intron 40.0%
! AGTGGATTTGCAAGCAAAGA+TGG - chr8.1:60600890-60600909 MS.gene77800:CDS 40.0%
! ATTGAGTCTCTAAGGAAAGC+CGG - chr8.1:60601779-60601798 MS.gene77800:CDS 40.0%
! ATTTTGCAATGGGGCAGTTT+CGG - chr8.1:60602572-60602591 MS.gene77800:CDS 40.0%
! CATGTCGGTTATAGTTTACC+AGG - chr8.1:60600347-60600366 MS.gene77800:CDS 40.0%
! CCTTTTCACATTCCTCATGT+CGG - chr8.1:60600332-60600351 MS.gene77800:CDS 40.0%
! CGGTGAAACTTTTCGTCAAA+GGG - chr8.1:60601459-60601478 MS.gene77800:CDS 40.0%
! GAACATTTGGAACATGACCT+AGG + chr8.1:60604006-60604025 None:intergenic 40.0%
! GGTGAAACTTTTCGTCAAAG+GGG - chr8.1:60601460-60601479 MS.gene77800:CDS 40.0%
! TACAGAGTCCTCAGCTTTAT+GGG - chr8.1:60603031-60603050 MS.gene77800:CDS 40.0%
! TCAATGGCATTTTGCCTTTG+AGG - chr8.1:60601628-60601647 MS.gene77800:CDS 40.0%
! TCGGTGAAACTTTTCGTCAA+AGG - chr8.1:60601458-60601477 MS.gene77800:CDS 40.0%
! TCTTATTTGTACACGGACAC+TGG - chr8.1:60602608-60602627 MS.gene77800:CDS 40.0%
! TGAGCATAGCTTTTGTCTCA+CGG + chr8.1:60600083-60600102 None:intergenic 40.0%
! TGATAGTGAACTGGAAGAAG+AGG - chr8.1:60602072-60602091 MS.gene77800:CDS 40.0%
! TGGAGTTGTTTCAACTCCTA+TGG - chr8.1:60602012-60602031 MS.gene77800:CDS 40.0%
! TGGCTTCAGATTTTGCAATG+GGG - chr8.1:60602563-60602582 MS.gene77800:CDS 40.0%
! TTCCTTGTGTTTTACAGCGT+TGG + chr8.1:60603383-60603402 None:intergenic 40.0%
!! CCTATGGCGTTGATTATTGA+TGG - chr8.1:60602028-60602047 MS.gene77800:CDS 40.0%
!! CTACTTTGGGACCTAATTCA+AGG + chr8.1:60601324-60601343 None:intergenic 40.0%
!! GTTTGAGGACGCTTGTTATT+GGG - chr8.1:60601576-60601595 MS.gene77800:CDS 40.0%
!! TAAAGTATGGGTGTTGACTG+GGG - chr8.1:60601805-60601824 MS.gene77800:CDS 40.0%
!! TCAACTAGGGAAGTCACTTT+TGG - chr8.1:60599253-60599272 MS.gene77800:CDS 40.0%
!!! CAACTAGCTGTTTTTGGTAG+AGG - chr8.1:60599550-60599569 MS.gene77800:intron 40.0%
ACTATGACCATCGCTCTTTG+TGG - chr8.1:60602806-60602825 MS.gene77800:intron 45.0%
ACTTGGCCATGGATGTAATC+AGG - chr8.1:60603232-60603251 MS.gene77800:CDS 45.0%
AGAAAACTCTGTTGGGGTGA+GGG - chr8.1:60603596-60603615 MS.gene77800:CDS 45.0%
AGAGCTGGAATCAACAGCAT+TGG + chr8.1:60602167-60602186 None:intergenic 45.0%
AGATACCATACCATCTCCGA+TGG + chr8.1:60602298-60602317 None:intergenic 45.0%
AGGATATCGGGATCATAACC+TGG + chr8.1:60600368-60600387 None:intergenic 45.0%
AGTCCACCTGATTACATCCA+TGG + chr8.1:60603241-60603260 None:intergenic 45.0%
AGTTGAAGGAGTTAAGGAGC+TGG + chr8.1:60601293-60601312 None:intergenic 45.0%
ATACGTAGATGGAAGGCAAG+CGG - chr8.1:60603780-60603799 MS.gene77800:CDS 45.0%
ATGCTTATAGAGCGAACCTC+AGG - chr8.1:60601070-60601089 MS.gene77800:intron 45.0%
CAACATGTGATAGGTCAGAG+TGG - chr8.1:60603526-60603545 MS.gene77800:CDS 45.0%
CACGAAAAGGAGAGGTTTAG+TGG - chr8.1:60599898-60599917 MS.gene77800:intron 45.0%
CACTCTGACCTATCACATGT+TGG + chr8.1:60603528-60603547 None:intergenic 45.0%
CACTCTGACTGAGAACAAGA+TGG - chr8.1:60600548-60600567 MS.gene77800:CDS 45.0%
CACTGGAATTACCAACGACT+AGG - chr8.1:60602625-60602644 MS.gene77800:CDS 45.0%
CAGAGTCACCAACATGTGAT+AGG - chr8.1:60603517-60603536 MS.gene77800:CDS 45.0%
CCGACATGAGGAATGTGAAA+AGG + chr8.1:60600335-60600354 None:intergenic 45.0%
CTACAGAGTCCTCAGCTTTA+TGG - chr8.1:60603030-60603049 MS.gene77800:CDS 45.0%
CTAGGTGGTCCAATAAGACT+AGG + chr8.1:60603988-60604007 None:intergenic 45.0%
CTTCCCCAATATGCAAAGAG+AGG + chr8.1:60603147-60603166 None:intergenic 45.0%
GATCCAAATGGCTGATGTTG+GGG - chr8.1:60602504-60602523 MS.gene77800:CDS 45.0%
GCTATGCAGGTTCAATGTCT+TGG - chr8.1:60601373-60601392 MS.gene77800:intron 45.0%
GTCGTGTAGAAGACGTTTAC+AGG - chr8.1:60601919-60601938 MS.gene77800:CDS 45.0%
GTGATAGGTCAGAGTGGTAA+CGG - chr8.1:60603532-60603551 MS.gene77800:CDS 45.0%
GTTCAATCCTAGGCTTGAGA+AGG - chr8.1:60604022-60604041 MS.gene77800:CDS 45.0%
GTTGAAGGAGTTAAGGAGCT+GGG + chr8.1:60601292-60601311 None:intergenic 45.0%
GTTGAGAGTTCCACATTGGA+TGG - chr8.1:60604049-60604068 MS.gene77800:CDS 45.0%
TAGCAAGTATGGGGGATCTT+TGG - chr8.1:60603178-60603197 MS.gene77800:CDS 45.0%
TATCAGCTTGACTGTAGGGT+CGG + chr8.1:60600987-60601006 None:intergenic 45.0%
TCAAGGGCTAAAGCAGTTGA+AGG + chr8.1:60601307-60601326 None:intergenic 45.0%
TCGGATGTGTCAACAACAAG+AGG + chr8.1:60600968-60600987 None:intergenic 45.0%
TGACGATAGCCGATACGTTA+TGG - chr8.1:60603097-60603116 MS.gene77800:CDS 45.0%
TGATAGGTCAGAGTGGTAAC+GGG - chr8.1:60603533-60603552 MS.gene77800:CDS 45.0%
TGGATTTCAGGCTACAATGG+AGG - chr8.1:60599957-60599976 MS.gene77800:intron 45.0%
TGGCAAGCACCACATTATTC+TGG - chr8.1:60604177-60604196 MS.gene77800:CDS 45.0%
TTACCAACGACTAGGCTACA+TGG - chr8.1:60602633-60602652 MS.gene77800:CDS 45.0%
TTCGTGCAAGTTCAAAGAGC+TGG + chr8.1:60602182-60602201 None:intergenic 45.0%
TTGAAGGAGTTAAGGAGCTG+GGG + chr8.1:60601291-60601310 None:intergenic 45.0%
TTGCAGGGCTATCTTTGATG+TGG - chr8.1:60604157-60604176 MS.gene77800:CDS 45.0%
! AACTTGCTCATTCTCAAGGC+TGG + chr8.1:60600622-60600641 None:intergenic 45.0%
! ACAATCCCAGCCTTTTGCAA+CGG + chr8.1:60602237-60602256 None:intergenic 45.0%
! ACAGAGTCCTCAGCTTTATG+GGG - chr8.1:60603032-60603051 MS.gene77800:CDS 45.0%
! CATTTGGAACATGACCTAGG+TGG + chr8.1:60604003-60604022 None:intergenic 45.0%
! CTTCAGTTTGTGCTGCTGTT+TGG - chr8.1:60600202-60600221 MS.gene77800:CDS 45.0%
! GAAACTTTTCGTCAAAGGGG+CGG - chr8.1:60601463-60601482 MS.gene77800:CDS 45.0%
! TCTATGGAGCTTGTTCGTGT+TGG - chr8.1:60600396-60600415 MS.gene77800:CDS 45.0%
! TGGATGTAATCAGGTGGACT+TGG - chr8.1:60603241-60603260 MS.gene77800:CDS 45.0%
!! AGAAGTACTTGCTGCCTCAA+AGG + chr8.1:60601645-60601664 None:intergenic 45.0%
!! CTAGTCTTATTGGACCACCT+AGG - chr8.1:60603986-60604005 MS.gene77800:CDS 45.0%
!! GGTTTGAGGACGCTTGTTAT+TGG - chr8.1:60601575-60601594 MS.gene77800:CDS 45.0%
!! GTTGGTGTTGCTGTGTATTG+TGG - chr8.1:60600057-60600076 MS.gene77800:intron 45.0%
AACCTGTTGGATGCACAAGG+TGG + chr8.1:60603631-60603650 None:intergenic 50.0%
AATGTAGCTGCACCTGAGGT+TGG - chr8.1:60601965-60601984 MS.gene77800:CDS 50.0%
ACCTGTTGGATGCACAAGGT+GGG + chr8.1:60603630-60603649 None:intergenic 50.0%
ATCTATGTCGGGGAACCTGT+TGG + chr8.1:60603644-60603663 None:intergenic 50.0%
ATGACTCTAGCCATCGGAGA+TGG - chr8.1:60602285-60602304 MS.gene77800:intron 50.0%
CAAATGGCTGATGTTGGGGT+TGG - chr8.1:60602508-60602527 MS.gene77800:CDS 50.0%
CAACCCCAACATCAGCCATT+TGG + chr8.1:60602510-60602529 None:intergenic 50.0%
CAGGCTACAATGGAGGTTGA+TGG - chr8.1:60599964-60599983 MS.gene77800:intron 50.0%
CTCGTTAATTGGTGTGGCAG+TGG - chr8.1:60603669-60603688 MS.gene77800:CDS 50.0%
GAGAAAACTCTGTTGGGGTG+AGG - chr8.1:60603595-60603614 MS.gene77800:CDS 50.0%
GCGTGTTGAGAGTTCCACAT+TGG - chr8.1:60604045-60604064 MS.gene77800:CDS 50.0%
GGCAGTGAAGAGAACATACC+TGG + chr8.1:60602893-60602912 None:intergenic 50.0%
GGTCAATTTGCACTTGGCCA+TGG - chr8.1:60603221-60603240 MS.gene77800:CDS 50.0%
GTTGTGTGTCTTTGTCTGCC+AGG - chr8.1:60602872-60602891 MS.gene77800:intron 50.0%
TAGCTCCGTTGCAAAAGGCT+GGG - chr8.1:60602229-60602248 MS.gene77800:intron 50.0%
TCAAGACGGCTCCTCTTAGA+CGG + chr8.1:60600120-60600139 None:intergenic 50.0%
TCCGATGGCTAGAGTCATGT+CGG + chr8.1:60602283-60602302 None:intergenic 50.0%
TCGAGTAGCTCCGTTGCAAA+AGG - chr8.1:60602224-60602243 MS.gene77800:intron 50.0%
TCTAGCCATCGGAGATGGTA+TGG - chr8.1:60602290-60602309 MS.gene77800:intron 50.0%
TGAACATACGCAACACCGGT+AGG + chr8.1:60599808-60599827 None:intergenic 50.0%
TGCGATGATAGACCCCCAAA+TGG + chr8.1:60603280-60603299 None:intergenic 50.0%
TGGCCATGGATGTAATCAGG+TGG - chr8.1:60603235-60603254 MS.gene77800:CDS 50.0%
TTGTCGACGAGTGATCCTAC+CGG - chr8.1:60599790-60599809 MS.gene77800:intron 50.0%
! GCTCTCATTTTGGGCTATGC+AGG - chr8.1:60601360-60601379 MS.gene77800:intron 50.0%
!! GACGCTTGTTATTGGGATGC+GGG - chr8.1:60601583-60601602 MS.gene77800:CDS 50.0%
!! GGACGCTTGTTATTGGGATG+CGG - chr8.1:60601582-60601601 MS.gene77800:CDS 50.0%
AAACTCTGTTGGGGTGAGGG+TGG - chr8.1:60603599-60603618 MS.gene77800:CDS 55.0%
AACACGCCCTTCTCAAGCCT+AGG + chr8.1:60604032-60604051 None:intergenic 55.0%
AACTCTGTTGGGGTGAGGGT+GGG - chr8.1:60603600-60603619 MS.gene77800:CDS 55.0%
ACATATGCTGCCGCTGCCTA+TGG - chr8.1:60601043-60601062 MS.gene77800:intron 55.0%
ACCCACCTTGTGCATCCAAC+AGG - chr8.1:60603626-60603645 MS.gene77800:CDS 55.0%
ACTCAGGAGCTCCGTCTAAG+AGG - chr8.1:60600106-60600125 MS.gene77800:intron 55.0%
CGGTAGCGCCCAATATGCAT+AGG + chr8.1:60601721-60601740 None:intergenic 55.0%
GCACCATGTAGCCTAGTCGT+TGG + chr8.1:60602639-60602658 None:intergenic 55.0%
GCCGACATGACTCTAGCCAT+CGG - chr8.1:60602279-60602298 MS.gene77800:intron 55.0%
GGAGGGTAGGCAAGCTGTAA+TGG - chr8.1:60602543-60602562 MS.gene77800:CDS 55.0%
GGGAACCTGTTGGATGCACA+AGG + chr8.1:60603634-60603653 None:intergenic 55.0%
GTAGCTCCGTTGCAAAAGGC+TGG - chr8.1:60602228-60602247 MS.gene77800:intron 55.0%
GTTGGCATCAGTGGTCAGGA+GGG - chr8.1:60602526-60602545 MS.gene77800:CDS 55.0%
TGGGGCTGGACAAAGACAAG+AGG - chr8.1:60603050-60603069 MS.gene77800:CDS 55.0%
TGTCCAGCCCCATAAAGCTG+AGG + chr8.1:60603042-60603061 None:intergenic 55.0%
! AGTCCTCAGCTTTATGGGGC+TGG - chr8.1:60603036-60603055 MS.gene77800:CDS 55.0%
! GATGTTGGGGTTGGCATCAG+TGG - chr8.1:60602517-60602536 MS.gene77800:CDS 55.0%
! GGAGCTTGTTCGTGTTGGTC+AGG - chr8.1:60600401-60600420 MS.gene77800:CDS 55.0%
! TAGGGCTGCTTTGCTTCGCA+AGG - chr8.1:60601673-60601692 MS.gene77800:CDS 55.0%
!! GAGTGGTAACGGGAAGCAAG+TGG - chr8.1:60603543-60603562 MS.gene77800:CDS 55.0%
GCATCAGTGGTCAGGAGGGT+AGG - chr8.1:60602530-60602549 MS.gene77800:CDS 60.0%
GGTTGGCATCAGTGGTCAGG+AGG - chr8.1:60602525-60602544 MS.gene77800:CDS 60.0%
! TGGGGTTGGCATCAGTGGTC+AGG - chr8.1:60602522-60602541 MS.gene77800:CDS 60.0%
!! GCAGGGAATTCGGTTCGGAC+CGG - chr8.1:60599424-60599443 MS.gene77800:intron 60.0%
TCTGTTGGGGTGAGGGTGGG+AGG - chr8.1:60603603-60603622 MS.gene77800:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 60599166 60604379 60599166 ID=MS.gene77800
chr8.1 mRNA 60599166 60604379 60599166 ID=MS.gene77800.t1;Parent=MS.gene77800
chr8.1 exon 60602888 60604379 60602888 ID=MS.gene77800.t1.exon1;Parent=MS.gene77800.t1
chr8.1 CDS 60602888 60604379 60602888 ID=cds.MS.gene77800.t1;Parent=MS.gene77800.t1
chr8.1 exon 60602417 60602723 60602417 ID=MS.gene77800.t1.exon2;Parent=MS.gene77800.t1
chr8.1 CDS 60602417 60602723 60602417 ID=cds.MS.gene77800.t1;Parent=MS.gene77800.t1
chr8.1 exon 60601452 60602163 60601452 ID=MS.gene77800.t1.exon3;Parent=MS.gene77800.t1
chr8.1 CDS 60601452 60602163 60601452 ID=cds.MS.gene77800.t1;Parent=MS.gene77800.t1
chr8.1 exon 60601239 60601362 60601239 ID=MS.gene77800.t1.exon4;Parent=MS.gene77800.t1
chr8.1 CDS 60601239 60601362 60601239 ID=cds.MS.gene77800.t1;Parent=MS.gene77800.t1
chr8.1 exon 60600841 60601060 60600841 ID=MS.gene77800.t1.exon5;Parent=MS.gene77800.t1
chr8.1 CDS 60600841 60601060 60600841 ID=cds.MS.gene77800.t1;Parent=MS.gene77800.t1
chr8.1 exon 60600193 60600651 60600193 ID=MS.gene77800.t1.exon6;Parent=MS.gene77800.t1
chr8.1 CDS 60600193 60600651 60600193 ID=cds.MS.gene77800.t1;Parent=MS.gene77800.t1
chr8.1 exon 60599166 60599382 60599166 ID=MS.gene77800.t1.exon7;Parent=MS.gene77800.t1
chr8.1 CDS 60599166 60599382 60599166 ID=cds.MS.gene77800.t1;Parent=MS.gene77800.t1
Gene Sequence

>MS.gene77800

ATGGATACAAAAAACCCATCTGAGAATTCTTCAAAGTTTGAAACTTTCATGCATAATTCATCATCAAGAAGAAGTTCTGGTAGAAATTCAACTAGGGAAGTCACTTTTGGTCACTCTGAGTCCAAACCTGTAAGATATGGATCAAAGGGTGCTGTTGATTCTGAAGCATTCAGCATGTCTCAGAAAGAAATCAGTGATGAAGATGCTAGGTTGATTTATGTTGATGATCCTGATAGAACAAATGAGAGATTTGAATTTGCAGGGAATTCGGTTCGGACCGGAAAATACTCTTTTATAACTTTTCTTCCTAGGAATTTGTTTGAACAGTTTCATAGAGTTGCTTATATTTATTTCCTTATAATTGCTATACTTAATCAGTTACCTCAACTAGCTGTTTTTGGTAGAGGTGTATCAATTTTGCCATTGGCTTTTGTTCTTCTTGTTACTGCTGTGAAAGATGCATATGAGGATTGGAGGAGACATAGATCAGATAAAGTTGAGAACAATAGGTTAGGATTGGTTTTGGTTAATGGTCATTTCATAGAGAAGAAATGGAAAGATATTAGAGTTGGTGAGATCATTAAAATCAATGCAAATGAACCGATTCCTTGTGATTTTGTTTTGTTGTCGACGAGTGATCCTACCGGTGTTGCGTATGTTCAAACTCTTAATCTAGATGGTGAGTCTAATTTGAAGACTAGGTATGCAAAACAAGAGACTCAATTTAAGTTTCACGAAAAGGAGAGGTTTAGTGGTTTGATTAAGTGCGAGAAACCGAATAGGAATATATATGGATTTCAGGCTACAATGGAGGTTGATGGAAAGAGATTGTCACTTGGTTCCTCGAATATTGTACTTAGAGGATGTGAACTTAAGAATACTAATTGTGTGGTTGGTGTTGCTGTGTATTGTGGCCGTGAGACAAAAGCTATGCTCAATAACTCAGGAGCTCCGTCTAAGAGGAGCCGTCTTGAGACACAAATGAACTCTGAGATCATCATGCTTTCGTTCTTTCTTGTAGTTTTGTGTTCAGTTACTTCAGTTTGTGCTGCTGTTTGGTTAAAGCGAAACAAGAATGAATTGAATCGATTACCTTATTATAGGAAATTGGATTTTTCAAAGGGAAAAGAGGAAAGTTATCAATATTATGGATGGGGAGTGGAAATCCTTTTCACATTCCTCATGTCGGTTATAGTTTACCAGGTTATGATCCCGATATCCTTGTACATTTCTATGGAGCTTGTTCGTGTTGGTCAGGCCTACTTCATGATCAAAGATTCTAGATTGTATGATGAGGCAACGAATTCAAGATTTCAGTGTAGGGCCTTGAATATCAATGAAGATTTAGGGCAAATTAAATATGTCTTTTCAGACAAAACTGGCACTCTGACTGAGAACAAGATGGAGTTTCAATGCGCTAGTATTTGGGGTGTCGATTACAGTTCTGCAAAAGCCAGCCTTGAGAATGAGCAAGTTGAATACTCTCTTCAAGGTGCAATTTCTTCGTCAAATATGCTTGTCTGTTGTTCTAACATACTTTTAGCTTTAAGTTTATTGCATTTGTTCTTTTTTACTTCGTCAAATATGCATTTGTTCTAACATACTTTTATGCTTGCATTTGTTCTAACATATTTTTGTGTTGTTATTTGGTCTCAGTGAATGGAAAGGTCTTGAAGCCAAAAATGAGGGTGAAAGTTAATCAAGAGCTTATGCGATTAGCAAAAAGTGGATTTGCAAGCAAAGATGGAAAACGGATTTACGATTTCTTTCTTGCACTGGCAGCATGCAATACTATTGTGCCTCTTGTTGTTGACACATCCGACCCTACAGTCAAGCTGATAGATTATCAAGGGGAATCACCAGATGAACAAGCGTTGACATATGCTGCCGCTGCCTATGGTTTTATGCTTATAGAGCGAACCTCAGGTCACATAATGATTGATATTCTTGGAGAACAACAAAGGTAAATTAATTTTTTTAATAAATTACTTTTTACTTCTTTTTCTTCCCCAAACAGATATTTTTATGTTGAAAATTGACAATTTAGAATGATTTGCTGTTAATGGTTTTGTATTAAGGATGTTTAAGCAGTTTGTAAGAGTATTTGCAAATATTATTTGAACCCCAGCTCCTTAACTCCTTCAACTGCTTTAGCCCTTGAATTAGGTCCCAAAGTAGTCCTTTTTTTATGAATGCTCTCATTTTGGGCTATGCAGGTTCAATGTCTTGGGGTTGCATGAATTTGATAGTGATCGGAAAAGAATGTCTGTTATATTGGGGTGCAATGACAATTCGGTGAAACTTTTCGTCAAAGGGGCGGATACATCAATGTTCAGTGTGATCAATAAATCATTGAATACAGACATAATACAGGATACTGAAACCCATCTTCACTCTTATTCTTCTGTGGGTTTGAGGACGCTTGTTATTGGGATGCGGGACTTAAATGCTTCAGAATTTGATCAATGGCATTTTGCCTTTGAGGCAGCAAGTACTTCTATGATTGGTAGGGCTGCTTTGCTTCGCAAGGTTGCTGCAAATGTAGAAAATAACCTATGCATATTGGGCGCTACCGCTATTGAAGATAAACTGCAGCAAGGTGTACCAGAAGCTATTGAGTCTCTAAGGAAAGCCGGTATTAAAGTATGGGTGTTGACTGGGGACAAACAAGAAACTGCCATATCAATTGGCTACTCGTCAAAGCTACTAACAAGTGGCATGACTCAGTTTAGAATTAAGAGCAATAATCGAGAGTCGTGTAGAAGACGTTTACAGGATGCACTTCTCATGTCTAGAAAAAATGTAGCTGCACCTGAGGTTGGCAACTATATTGAAGGAAGTTCTGATGGAGTTGTTTCAACTCCTATGGCGTTGATTATTGATGGTACCAGCCTTGTATATATTCTTGATAGTGAACTGGAAGAAGAGGTATGTGTTGATAGATCTCAGATGGTGTTTACAATGCATTTCATGCTTATTTGTTATGTGCTGACTTTGACCAATGCTGTTGATTCCAGCTCTTTGAACTTGCACGAAGATGTTCCGTTGTTCTTTGTTGTCGAGTAGCTCCGTTGCAAAAGGCTGGGATTGTCTCTCTCGTAAAGAATAGGACGGCCGACATGACTCTAGCCATCGGAGATGGTATGGTATCTTCATTTTACTTGTTTCAGATTATCATTTCCCTTCAAATAATGAGAACAAAATACAAGGACAGAGAAAATGGAAAAGAGAGAAAAAGCATCGGTTAAAAATAGAAGATAAAAAATTCTATACATGATTTATTGTTGTTTAAATGATCTTTCTCCTTCATGTGTTATAGGTGCTAACGATGTATCAATGATCCAAATGGCTGATGTTGGGGTTGGCATCAGTGGTCAGGAGGGTAGGCAAGCTGTAATGGCTTCAGATTTTGCAATGGGGCAGTTTCGGTTTTTAGTTCCTCTCTTATTTGTACACGGACACTGGAATTACCAACGACTAGGCTACATGGTGCTATACAATTTTTATAGAAATGCTGTCTTTGTGCTAATTCTGTTTTGGTAAGTTAAAATTCAGCTTATGTTTATATGTAGATGTTGTCTTCATGCAGTTTGTCATTGAGTATGCTACAAACATCATGTATAGAAACTCTTATGCGAAAACTATGACCATCGCTCTTTGTGGCTTTTAAGATGCATGGTTTCAAATTTTGATATCTTACTATCTTGTTGTGTGTCTTTGTCTGCCAGGTATGTTCTCTTCACTGCCTTCACTTTGACAACAGCTATAAATGAATGGAGCAGCATGTTGTATTCAATAATCTACACTGCAGTGCCAACTATTGTTGTTGCCATTTTTGACAAGGATCTTAGTAAAAGGACTCTTCTACAGAGTCCTCAGCTTTATGGGGCTGGACAAAGACAAGAGGCCTACAACAAAAAATTGTTTTGGTTGACGATAGCCGATACGTTATGGCAAAGCGTTGTTGTCTTTTTTGTTCCTCTCTTTGCATATTGGGGAAGCACTGTAGATATAGCAAGTATGGGGGATCTTTGGACTATTTCGATAGTTATTTTGGTCAATTTGCACTTGGCCATGGATGTAATCAGGTGGACTTGGATTTCTCATGCATCCATTTGGGGGTCTATCATCGCAACTTTCATATGTGTCATGGTTGTTGATGCTATACCATCACTTCATGGTTACTGGTACGTTCTATCTTTATGCAAATGAATCCAACGCTGTAAAACACAAGGAAATGATATGTTTATTTTTAAAACATTGCCAATTAGTCATGTCATGCATGCATGCGAATATGTTTATTTTTATAGTCATTATAAAATAAGTCATTTTATTATGTTTTAAAATGGCTCAGAGTCACCAACATGTGATAGGTCAGAGTGGTAACGGGAAGCAAGTGGTCAAAGTTTCAATTCCTAACTCATGTATGGAGAAAACTCTGTTGGGGTGAGGGTGGGAGGACCCACCTTGTGCATCCAACAGGTTCCCCGACATAGATTAGTACTCGTTAATTGGTGTGGCAGTGGATACTTCGTACCTATAACATGGTTATAAAAAACGGTTTGAGTGTTCTACTTTAAAATAAAAGAAGCAATCTATATAGAAATGTAATTTATACGTAGATGGAAGGCAAGCGGACAACAAGATGCACTGCTAATCCTTTATGGATGGAAAAATCAATCCTCTTAAATAAGTCTACGTTGGATAGTGGTATACTCTGAATTCGAGTTATAAGTTGAGAAAAATCCTTATCTTACAAGTCAACTTTGTAGGGTTGAGTTAGACTCAACTCAAATTCTAAGATGATATTTGTTTCTATCCTAGTCTTATTGGACCACCTAGGTCATGTTCCAAATGTTCAATCCTAGGCTTGAGAAGGGCGTGTTGAGAGTTCCACATTGGATGGCTTAAATAGTTTTTATATGCGAGAATTTCTACATTATTTTGTAATCGTGTAACATAAAATCTGACTATTACATGTGTACAAAACTTTGCAGGGCTATCTTTGATGTGGCAAGCACCACATTATTCTGGTTATGTTTGTTTGGAATACTGATAGCAGCATTGCTTCCACGTTTTGTTGTAAAGTTTGTTTATCAATATTACTGTCCCGACGATATTCAGATTTCAAGAGAAATCGAGAAGTTTGAGAATAGAAGGGTCAATGGAGATAGACAGATAGAAATGCTTCACATCTCAAATCCACAAAGATAA

Protein sequence

>MS.gene77800.t1

MDTKNPSENSSKFETFMHNSSSRRSSGRNSTREVTFGHSESKPVRYGSKGAVDSEAFSMSQKEISDEDARLIYVDDPDRTNERFEFAGNSVRTGKYSFITFLPRNLFEQFHRVAYIYFLIIAILNQLPQLAVFGRGVSILPLAFVLLVTAVKDAYEDWRRHRSDKVENNRLGLVLVNGHFIEKKWKDIRVGEIIKINANEPIPCDFVLLSTSDPTGVAYVQTLNLDGESNLKTRYAKQETQFKFHEKERFSGLIKCEKPNRNIYGFQATMEVDGKRLSLGSSNIVLRGCELKNTNCVVGVAVYCGRETKAMLNNSGAPSKRSRLETQMNSEIIMLSFFLVVLCSVTSVCAAVWLKRNKNELNRLPYYRKLDFSKGKEESYQYYGWGVEILFTFLMSVIVYQVMIPISLYISMELVRVGQAYFMIKDSRLYDEATNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSAKASLENEQVEYSLQVNGKVLKPKMRVKVNQELMRLAKSGFASKDGKRIYDFFLALAACNTIVPLVVDTSDPTVKLIDYQGESPDEQALTYAAAAYGFMLIERTSGHIMIDILGEQQRFNVLGLHEFDSDRKRMSVILGCNDNSVKLFVKGADTSMFSVINKSLNTDIIQDTETHLHSYSSVGLRTLVIGMRDLNASEFDQWHFAFEAASTSMIGRAALLRKVAANVENNLCILGATAIEDKLQQGVPEAIESLRKAGIKVWVLTGDKQETAISIGYSSKLLTSGMTQFRIKSNNRESCRRRLQDALLMSRKNVAAPEVGNYIEGSSDGVVSTPMALIIDGTSLVYILDSELEEELFELARRCSVVLCCRVAPLQKAGIVSLVKNRTADMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLFVHGHWNYQRLGYMVLYNFYRNAVFVLILFWYVLFTAFTLTTAINEWSSMLYSIIYTAVPTIVVAIFDKDLSKRTLLQSPQLYGAGQRQEAYNKKLFWLTIADTLWQSVVVFFVPLFAYWGSTVDIASMGDLWTISIVILVNLHLAMDVIRWTWISHASIWGSIIATFICVMVVDAIPSLHGYWAIFDVASTTLFWLCLFGILIAALLPRFVVKFVYQYYCPDDIQISREIEKFENRRVNGDRQIEMLHISNPQR