AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene82912

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82912.t1 MTR_6g006910 96.976 893 27 0 11 903 104 996 0.0 1796
MS.gene82912.t1 MTR_8g069920 67.303 890 281 4 16 904 121 1001 0.0 1283
MS.gene82912.t1 MTR_3g037330 65.517 899 290 6 9 904 29 910 0.0 1246
MS.gene82912.t1 MTR_3g037330 65.517 899 290 6 9 904 99 980 0.0 1246
MS.gene82912.t1 MTR_0021s0360 65.376 904 287 5 9 904 96 981 0.0 1243
MS.gene82912.t1 MTR_4g112430 65.324 894 290 6 16 904 110 988 0.0 1240
MS.gene82912.t1 MTR_2g099690 57.634 930 350 6 11 916 107 1016 0.0 1106
MS.gene82912.t1 MTR_2g099690 56.235 818 315 5 11 804 107 905 0.0 934
MS.gene82912.t1 MTR_2g099690 54.604 782 312 5 11 768 107 869 0.0 868
MS.gene82912.t1 MTR_5g037210 47.427 894 437 8 16 903 93 959 0.0 850
MS.gene82912.t1 MTR_8g018290 56.808 683 256 4 258 916 3 670 0.0 794
MS.gene82912.t1 MTR_8g018290 56.808 683 263 4 258 916 3 677 0.0 791
MS.gene82912.t1 MTR_7g073480 38.126 939 503 18 7 899 199 1105 0.0 603
MS.gene82912.t1 MTR_8g044210 39.608 919 492 18 1 899 120 995 0.0 602
MS.gene82912.t1 MTR_3g007240 37.897 913 496 15 1 897 171 1028 0.0 591
MS.gene82912.t1 MTR_2g090610 34.783 897 476 27 12 897 68 866 5.35e-154 479
MS.gene82912.t1 MTR_2g090610 34.783 897 476 27 12 897 68 866 3.98e-152 478
MS.gene82912.t1 MTR_8g062150 49.380 484 217 8 27 504 124 585 3.99e-146 446
MS.gene82912.t1 MTR_3g007240 35.830 801 443 15 1 785 171 916 1.04e-143 451
MS.gene82912.t1 MTR_2g056040 67.213 61 20 0 599 659 4 64 7.46e-22 91.3
MS.gene82912.t1 MTR_2g105830 23.887 494 255 16 364 836 480 873 8.92e-16 82.8
MS.gene82912.t1 MTR_4g008170 22.442 557 279 18 364 889 498 932 1.24e-13 75.9
MS.gene82912.t1 MTR_4g008170 22.442 557 279 18 364 889 491 925 1.63e-13 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82912.t1 AT3G27870 73.796 893 224 4 12 904 105 987 0.0 1399
MS.gene82912.t1 AT3G27870 73.879 892 223 4 12 903 105 986 0.0 1399
MS.gene82912.t1 AT1G68710 66.443 894 289 4 12 904 109 992 0.0 1264
MS.gene82912.t1 AT1G68710 66.443 894 289 4 12 904 109 992 0.0 1262
MS.gene82912.t1 AT1G68710 66.443 894 289 4 12 904 109 992 0.0 1262
MS.gene82912.t1 AT3G27870 73.540 805 203 4 99 903 1 795 0.0 1256
MS.gene82912.t1 AT3G25610 65.813 898 289 4 10 904 105 987 0.0 1245
MS.gene82912.t1 AT1G26130 65.475 895 295 4 11 904 108 989 0.0 1241
MS.gene82912.t1 AT1G26130 65.475 895 295 4 11 904 108 989 0.0 1241
MS.gene82912.t1 AT1G26130 65.475 895 295 4 11 904 108 989 0.0 1241
MS.gene82912.t1 AT1G26130 65.475 895 294 5 11 904 108 988 0.0 1237
MS.gene82912.t1 AT1G13210 64.174 896 308 4 11 904 104 988 0.0 1219
MS.gene82912.t1 AT3G13900 57.556 933 347 8 12 916 108 1019 0.0 1091
MS.gene82912.t1 AT1G54280 58.262 932 343 10 12 916 109 1021 0.0 1091
MS.gene82912.t1 AT1G54280 58.262 932 343 10 12 916 109 1021 0.0 1091
MS.gene82912.t1 AT1G54280 58.262 932 343 10 12 916 109 1021 0.0 1091
MS.gene82912.t1 AT1G72700 58.333 912 337 7 12 901 108 998 0.0 1087
MS.gene82912.t1 AT1G72700 58.333 912 337 7 12 901 108 998 0.0 1087
MS.gene82912.t1 AT1G72700 58.333 912 337 7 12 901 108 998 0.0 1087
MS.gene82912.t1 AT1G17500 59.354 898 338 7 12 901 108 986 0.0 1086
MS.gene82912.t1 AT1G17500 59.354 898 338 7 12 901 108 986 0.0 1086
MS.gene82912.t1 AT3G13900 57.176 857 319 7 12 840 108 944 0.0 992
MS.gene82912.t1 AT3G13900 56.121 825 314 7 12 808 108 912 0.0 929
MS.gene82912.t1 AT1G59820 47.315 894 437 10 14 903 103 966 0.0 850
MS.gene82912.t1 AT5G04930 38.689 915 483 13 1 896 118 973 0.0 597
MS.gene82912.t1 AT5G44240 34.783 897 476 26 12 897 68 866 3.60e-152 479
MS.gene82912.t1 AT5G44240 34.783 897 476 26 12 897 100 898 1.02e-151 478
MS.gene82912.t1 AT3G21180 23.448 580 275 18 323 889 484 907 1.81e-14 78.6

Find 195 sgRNAs with CRISPR-Local

Find 398 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAATCTTTACTCATTTAT+TGG 0.111248 6.1:+2379959 MS.gene82912:CDS
CATTTGGATTTACCCTATTT+TGG 0.181690 6.1:+2384304 MS.gene82912:CDS
CATATGCTTCAAACCAAAAT+AGG 0.183722 6.1:-2384317 None:intergenic
CCGTATATTACGATCCTAAA+AGG 0.197963 6.1:+2380302 MS.gene82912:CDS
TCAGCTTAGAATCTCTTAAA+AGG 0.228754 6.1:-2380030 None:intergenic
AAATATGCAGGTTACAAAAT+TGG 0.259678 6.1:+2383229 MS.gene82912:intron
GAAAGAGATTTGATACTTCT+TGG 0.266465 6.1:+2381809 MS.gene82912:CDS
CTTACGCGAGCTTTCTGTTT+TGG 0.284482 6.1:-2383131 None:intergenic
GTCTGCTGCTAAAGAGGTTT+TGG 0.285898 6.1:-2381750 None:intergenic
TTGATTAGCACAAGGTTTCT+TGG 0.290392 6.1:-2385047 None:intergenic
CATAATACATTTCTTGATCT+TGG 0.290925 6.1:-2380444 None:intergenic
AAGACGAGTTGTCGCTTCTA+AGG 0.302864 6.1:-2379879 None:intergenic
GGTATTGACTGGGGACAAAA+TGG 0.309305 6.1:+2382407 MS.gene82912:CDS
AACAGAAAGGTTCAGGTATA+TGG 0.323042 6.1:+2379674 MS.gene82912:CDS
AAAATCTCTGCAAAGGTTTA+GGG 0.323414 6.1:+2379910 MS.gene82912:CDS
GCACCTTTGGTGGCTGTGAT+TGG 0.324884 6.1:+2378630 MS.gene82912:CDS
ATCGACACATAAAGTGATAT+TGG 0.327451 6.1:-2380385 None:intergenic
GGCTGTGATTGGTGCTACTA+TGG 0.329930 6.1:+2378641 MS.gene82912:CDS
TTTAAGTATTGCTGCACCTT+TGG 0.333710 6.1:+2378617 MS.gene82912:CDS
GAGTTTGTCAAATGTTCAAT+AGG 0.333869 6.1:+2380577 MS.gene82912:CDS
ATGCTTCAGGAGGCTGATAT+TGG 0.337876 6.1:+2383311 MS.gene82912:CDS
ACCGGTCTTGTCAGACAATA+TGG 0.338776 6.1:-2380533 None:intergenic
GTTGAGGATAGACTTCAAAA+AGG 0.342658 6.1:+2381842 MS.gene82912:CDS
TCATTTGGCTTGATAATTGA+TGG 0.351837 6.1:+2383014 MS.gene82912:CDS
GTTGAAACAATGAATCTTGA+TGG 0.354343 6.1:+2379830 MS.gene82912:CDS
GTATTCTCTCGACAACTCTA+TGG 0.359733 6.1:+2383049 MS.gene82912:CDS
GAATGATGTCGGTATGCTTC+AGG 0.361534 6.1:+2383298 MS.gene82912:CDS
AATAGATAAAGTTGTCTTCC+CGG 0.362703 6.1:-2383264 None:intergenic
TTCAGCTGGACTCGGATTAT+CGG 0.364241 6.1:+2385126 MS.gene82912:CDS
TATTAAGTTTCGTGATTACT+TGG 0.366882 6.1:+2385021 MS.gene82912:CDS
GGGAAGACAACTTTATCTAT+TGG 0.366898 6.1:+2383266 MS.gene82912:CDS
TGTGGTGTTGTCATCTTTAC+CGG 0.373998 6.1:+2380070 MS.gene82912:CDS
TTGACTGCCCTTATGTTGTA+TGG 0.380516 6.1:+2380352 MS.gene82912:CDS
TTTGATATGATTATTAGTTT+CGG 0.384412 6.1:-2381633 None:intergenic
GTGCTTCTGTCATATGTTGC+CGG 0.385686 6.1:+2383102 MS.gene82912:CDS
AGTTTGTCAAATGTTCAATA+GGG 0.387467 6.1:+2380578 MS.gene82912:CDS
GGAGAGGATAGTTCTTCATT+TGG 0.390404 6.1:+2382999 MS.gene82912:CDS
TCAGATATCCATACAACATA+AGG 0.391153 6.1:-2380360 None:intergenic
GGAAAAGTCATTCTTTAAGT+TGG 0.391160 6.1:+2383070 MS.gene82912:CDS
ATCCGGTGACTCGGCTTCAT+AGG 0.400901 6.1:-2380887 None:intergenic
CTGTTGATCCTCCATCAAAA+AGG 0.401018 6.1:+2380119 MS.gene82912:CDS
GGCGAACAACAGAAAGGTTC+AGG 0.403431 6.1:+2379667 MS.gene82912:CDS
CTAAAGAAGCTGTGGAAGAT+TGG 0.409619 6.1:+2378664 MS.gene82912:CDS
GGTTACAAAATTGGTGAAGT+TGG 0.416390 6.1:+2383238 MS.gene82912:intron
GAAGCATATGCTTCATTCTC+CGG 0.421961 6.1:+2384330 MS.gene82912:CDS
CTAAGGCGGGAATCAAGTTA+TGG 0.422480 6.1:+2382385 MS.gene82912:CDS
GACAACACCACATATATATT+CGG 0.429734 6.1:-2380059 None:intergenic
GATAATTGATGGGAGGTCAT+TGG 0.434044 6.1:+2383025 MS.gene82912:CDS
AGAACTATCCTCTCCTGTAT+TGG 0.437928 6.1:-2382991 None:intergenic
ATCTTGTCTCCACAAATGTA+TGG 0.439622 6.1:-2379703 None:intergenic
AAATTGGTGAAGTTGGAAAC+CGG 0.439819 6.1:+2383245 MS.gene82912:CDS
AAGTATTGCTGCACCTTTGG+TGG 0.442950 6.1:+2378620 MS.gene82912:CDS
GACTCTCAGAAGACAGTTAA+GGG 0.444056 6.1:+2380724 MS.gene82912:CDS
ACTCTTCTTCGCCAACTTCA+CGG 0.446311 6.1:-2381697 None:intergenic
GAGCGTTTGTTGTTGGTACA+TGG 0.448456 6.1:+2384106 MS.gene82912:CDS
CACCCGTTTCTATATCTAGA+AGG 0.455286 6.1:+2385087 MS.gene82912:CDS
ATGACAAATGCGGCTTCATC+CGG 0.457982 6.1:-2380904 None:intergenic
TAAAATATTGCTCCTATGCA+AGG 0.462582 6.1:+2381298 MS.gene82912:CDS
GATATTGGAGTTGGAATTAG+TGG 0.463107 6.1:+2383326 MS.gene82912:CDS
ATATGCTTCAAACCAAAATA+GGG 0.463544 6.1:-2384316 None:intergenic
GGACTCTCAGAAGACAGTTA+AGG 0.465480 6.1:+2380723 MS.gene82912:CDS
AAAGATGAACGCATAATGAA+TGG 0.467223 6.1:+2380757 MS.gene82912:CDS
ATCAAAAGATATTCCGAGGC+AGG 0.467347 6.1:+2381650 MS.gene82912:CDS
TTACATTCTCTTTAGTACCT+TGG 0.467428 6.1:+2380174 MS.gene82912:CDS
AAGAATTTCTCTATGATGTC+CGG 0.469049 6.1:-2380802 None:intergenic
ATCAAGTTATGGGTATTGAC+TGG 0.475457 6.1:+2382396 MS.gene82912:CDS
ATGGCAAGTGATTATTCAAT+CGG 0.478262 6.1:+2384067 MS.gene82912:CDS
TAATATACGGTTGTTTCGTC+CGG 0.478371 6.1:-2380289 None:intergenic
ATCGTTGTAAGCGGCTTGAC+CGG 0.480348 6.1:-2384349 None:intergenic
GAAAATGATATTAATAATGA+TGG 0.483676 6.1:+2380241 MS.gene82912:CDS
CGCCTTCTAGATATAGAAAC+GGG 0.483687 6.1:-2385089 None:intergenic
ACAACAAACGCTCCAGAAAA+CGG 0.485211 6.1:-2384096 None:intergenic
CCGGACGCTTTATCTACATC+AGG 0.485733 6.1:-2380856 None:intergenic
TTCTCTATGATGTCCGGATG+TGG 0.487215 6.1:-2380796 None:intergenic
TCAGTATGGCCGTGGTATTA+CGG 0.489050 6.1:+2380606 MS.gene82912:CDS
CATTTGGCTTGATAATTGAT+GGG 0.489518 6.1:+2383015 MS.gene82912:CDS
CAGGAGGCTGATATTGGAGT+TGG 0.491676 6.1:+2383317 MS.gene82912:CDS
ATGATGGAAGTTACAGAAGA+TGG 0.496815 6.1:+2380257 MS.gene82912:CDS
CATGCAGTGTGATGTTTGAA+AGG 0.497284 6.1:+2381582 MS.gene82912:intron
TCTGCAAAGGTTTAGGGCTA+TGG 0.502294 6.1:+2379916 MS.gene82912:CDS
GTCATAGCTGCAAGGGAACT+CGG 0.503538 6.1:+2380922 MS.gene82912:CDS
CTTCTCGATGCTTTCACGAG+AGG 0.504872 6.1:-2382922 None:intergenic
ATGGATTAATGAACCACATC+CGG 0.505526 6.1:+2380783 MS.gene82912:CDS
TAAGGCGGGAATCAAGTTAT+GGG 0.505530 6.1:+2382386 MS.gene82912:CDS
ATGGAAACTGCAGTCAACAT+AGG 0.505992 6.1:+2382426 MS.gene82912:CDS
AAAACACCTAGAGCGATTAC+CGG 0.506036 6.1:-2384411 None:intergenic
TAGTGGTGCTGAAGGGATGC+AGG 0.506181 6.1:+2383343 MS.gene82912:CDS
TTGGTGTCTACAGGCTGTAA+TGG 0.509264 6.1:+2384048 MS.gene82912:intron
GTAATCACGTACCGTGAAGT+TGG 0.509466 6.1:+2381686 MS.gene82912:CDS
GTCAAGCCGCTTACAACGAT+TGG 0.511005 6.1:+2384352 MS.gene82912:CDS
TGTTGTTGGTACATGGCCAT+TGG 0.514056 6.1:+2384113 MS.gene82912:CDS
ATCGAAAAGCTTGCTAAGGC+GGG 0.515228 6.1:+2382372 MS.gene82912:CDS
CGTATATTACGATCCTAAAA+GGG 0.515360 6.1:+2380303 MS.gene82912:CDS
GAAAGCAGAAGAAGATCAGA+AGG 0.516551 6.1:-2379779 None:intergenic
TGTATTATGAAGAATCAGAT+AGG 0.516787 6.1:+2380458 MS.gene82912:CDS
TGTGTTCTTTACTTCGCTAC+CGG 0.517097 6.1:+2384392 MS.gene82912:CDS
TAGAGTTCTTAAACCTGCCT+CGG 0.517462 6.1:-2381663 None:intergenic
TCGCTACCGGTAATCGCTCT+AGG 0.518174 6.1:+2384405 MS.gene82912:CDS
CAGAAGATGGTATCTTCATC+CGG 0.520128 6.1:+2380270 MS.gene82912:CDS
CATCGAGAAGCAAATTAATG+AGG 0.521931 6.1:+2382935 MS.gene82912:CDS
TTAGATGTGTGCGCATGAGC+CGG 0.522245 6.1:-2380481 None:intergenic
TAGAGAACACCCTCTTCAGC+TGG 0.524088 6.1:+2385112 MS.gene82912:CDS
TGGCCGTGGTATTACGGAAG+TGG 0.525702 6.1:+2380612 MS.gene82912:CDS
TTCCTATGAAGCCGAGTCAC+CGG 0.526450 6.1:+2380885 MS.gene82912:CDS
AAGCTGTGGAAGATTGGAGA+AGG 0.527140 6.1:+2378670 MS.gene82912:CDS
CTGCATCCACAAGTGCATCT+CGG 0.530590 6.1:-2381772 None:intergenic
ACAAAAGAGAGTTCCAATAC+AGG 0.533909 6.1:+2382978 MS.gene82912:CDS
CAGATATCCATACAACATAA+GGG 0.534041 6.1:-2380359 None:intergenic
TCCTATGCAAGGGTGCAGAC+AGG 0.535799 6.1:+2381309 MS.gene82912:CDS
TTGCTAGGAGAGCAAAGGAC+AGG 0.536005 6.1:+2380644 MS.gene82912:CDS
ATCTCGGTCTGCTGCTAAAG+AGG 0.537657 6.1:-2381756 None:intergenic
CCGGTTTCTTCAGGATATAG+AGG 0.538313 6.1:+2379646 MS.gene82912:intron
TCTGCTTTCGTCAAGCTATG+AGG 0.538712 6.1:+2379793 MS.gene82912:CDS
CATCACTTTCGTGTCATGAC+CGG 0.539072 6.1:-2380089 None:intergenic
TTTGAAAGGCTCTCACAATA+CGG 0.540284 6.1:+2381596 MS.gene82912:CDS
TCTAATTTGAATGAAGAACT+TGG 0.541056 6.1:+2380499 MS.gene82912:CDS
GCTGGACTCGGATTATCGGC+TGG 0.541793 6.1:+2385130 MS.gene82912:CDS
TACTTTGACATGCAACTCCA+TGG 0.543193 6.1:+2380555 MS.gene82912:CDS
ACGCCTTCTAGATATAGAAA+CGG 0.549654 6.1:-2385090 None:intergenic
GGCTTCATAGGAAATTTCTC+CGG 0.553124 6.1:-2380875 None:intergenic
GTCTTGTCTAAGTAAACTAC+AGG 0.553290 6.1:-2382744 None:intergenic
TCTTGGCGCTACAGCAGTTG+AGG 0.553646 6.1:+2381826 MS.gene82912:CDS
TGGTATTACGGAAGTGGAGA+AGG 0.553661 6.1:+2380618 MS.gene82912:CDS
AGGATCTGTTGCAACGAAAG+AGG 0.554186 6.1:-2380010 None:intergenic
TGCGGCTTCATCCGGTGACT+CGG 0.555455 6.1:-2380896 None:intergenic
TGGAAACTGCAGTCAACATA+GGG 0.557559 6.1:+2382427 MS.gene82912:CDS
ACAACTTTATCTATTGGTGA+TGG 0.559855 6.1:+2383272 MS.gene82912:CDS
ACACCCTCTTCAGCTGGACT+CGG 0.560106 6.1:+2385118 MS.gene82912:CDS
TTATGAAGAATCAGATAGGC+CGG 0.560725 6.1:+2380462 MS.gene82912:CDS
AAGTGGAGAAGGCACTTGCT+AGG 0.566705 6.1:+2380629 MS.gene82912:CDS
GAGTCAGAGTAGCGATGTTG+TGG 0.568196 6.1:+2380702 MS.gene82912:CDS
TATTACGATCCTAAAAGGGC+AGG 0.568556 6.1:+2380307 MS.gene82912:CDS
TGAACATTTGACAAACTCCA+TGG 0.568987 6.1:-2380572 None:intergenic
CCTGATGTAGATAAAGCGTC+CGG 0.571937 6.1:+2380856 MS.gene82912:CDS
TATCGAAAAGCTTGCTAAGG+CGG 0.574722 6.1:+2382371 MS.gene82912:CDS
AATAGAGAAACAAGGGGACA+AGG 0.576206 6.1:+2382811 MS.gene82912:CDS
TCAAGTTATGGGTATTGACT+GGG 0.576707 6.1:+2382397 MS.gene82912:CDS
ATATTCTTCTATAACACCAA+TGG 0.576784 6.1:-2384129 None:intergenic
ACCATATTGTCTGACAAGAC+CGG 0.580377 6.1:+2380532 MS.gene82912:CDS
CGCATTTGTCATAGCTGCAA+GGG 0.580801 6.1:+2380915 MS.gene82912:CDS
TTCAGCCAGACTATGCCAAA+AGG 0.582138 6.1:+2384446 MS.gene82912:CDS
ACCTGTCTGCACCCTTGCAT+AGG 0.582339 6.1:-2381310 None:intergenic
GGAGTTGCATGTCAAAGTAC+CGG 0.583936 6.1:-2380551 None:intergenic
TTATAGAAGAATATCAATGA+TGG 0.584565 6.1:+2384138 MS.gene82912:CDS
ATACATTTGTGGAGACAAGA+TGG 0.585382 6.1:+2379705 MS.gene82912:CDS
TAATCCGAGTCCAGCTGAAG+AGG 0.588505 6.1:-2385122 None:intergenic
CCGCATTTGTCATAGCTGCA+AGG 0.591830 6.1:+2380914 MS.gene82912:CDS
ATCGAGAAGCAAATTAATGA+GGG 0.592066 6.1:+2382936 MS.gene82912:CDS
ATGTATCGAAAAGCTTGCTA+AGG 0.595722 6.1:+2382368 MS.gene82912:CDS
AGAGTATAAGCAGTGGGACA+AGG 0.596446 6.1:+2381715 MS.gene82912:CDS
GTTTGTCAAATGTTCAATAG+GGG 0.596677 6.1:+2380579 MS.gene82912:CDS
GGACAAGGAGGCTCTAATGA+AGG 0.601203 6.1:+2382826 MS.gene82912:CDS
AAAATATTGCTCCTATGCAA+GGG 0.601599 6.1:+2381299 MS.gene82912:CDS
TGCTAGGAGAGCAAAGGACA+GGG 0.602114 6.1:+2380645 MS.gene82912:CDS
AGAAATACCGAATATATATG+TGG 0.605220 6.1:+2380052 MS.gene82912:CDS
TATAGAGGCGAACAACAGAA+AGG 0.606510 6.1:+2379661 MS.gene82912:CDS
GCGAAGAAGAGTATAAGCAG+TGG 0.606726 6.1:+2381708 MS.gene82912:CDS
AATTGGTGAAGTTGGAAACC+GGG 0.607524 6.1:+2383246 MS.gene82912:CDS
TACTATGGCTAAAGAAGCTG+TGG 0.610973 6.1:+2378656 MS.gene82912:CDS
GGATGCAGCAGCTGACAAGA+TGG 0.612373 6.1:+2381787 MS.gene82912:CDS
AGCAGACCGAGATGCACTTG+TGG 0.614290 6.1:+2381766 MS.gene82912:CDS
CGAAGAAGAGTATAAGCAGT+GGG 0.616116 6.1:+2381709 MS.gene82912:CDS
AATCCGAGTCCAGCTGAAGA+GGG 0.622661 6.1:-2385121 None:intergenic
AACGCATAATGAATGGACAA+TGG 0.624312 6.1:+2380764 MS.gene82912:CDS
CCTTGCAGCTATGACAAATG+CGG 0.624318 6.1:-2380914 None:intergenic
TCATATCAATAGAGAAACAA+GGG 0.624609 6.1:+2382804 MS.gene82912:CDS
TTGGCTTGATAATTGATGGG+AGG 0.626792 6.1:+2383018 MS.gene82912:CDS
GCAAAGGACAGGGAATCTGA+AGG 0.627375 6.1:+2380655 MS.gene82912:CDS
CATATACCAATCGTTGTAAG+CGG 0.630846 6.1:-2384358 None:intergenic
CATGAGTTGAATCATGAAAG+CGG 0.634666 6.1:+2380985 MS.gene82912:CDS
AGAGAGTTCCAATACAGGAG+AGG 0.635392 6.1:+2382983 MS.gene82912:CDS
GGCACTTGCTAGGAGAGCAA+AGG 0.636441 6.1:+2380639 MS.gene82912:CDS
TTTGTCAAATGTTCAATAGG+GGG 0.637077 6.1:+2380580 MS.gene82912:CDS
ATCATATCAATAGAGAAACA+AGG 0.642078 6.1:+2382803 MS.gene82912:CDS
GTGGGACAAGGAGTTCTCAA+AGG 0.642224 6.1:+2381727 MS.gene82912:CDS
GGTGATGGTGCGAATGATGT+CGG 0.644692 6.1:+2383287 MS.gene82912:CDS
ATTATCGGCTGGATGTTGAA+CGG 0.645393 6.1:+2385141 MS.gene82912:CDS
CTTTCGTCAAGCTATGAGGA+CGG 0.647046 6.1:+2379797 MS.gene82912:CDS
ATGATAGTTTGATTAGCACA+AGG 0.649484 6.1:-2385055 None:intergenic
TTGGAATTAGTGGTGCTGAA+GGG 0.650775 6.1:+2383336 MS.gene82912:CDS
TGATGTGATTAAAGTGTACA+AGG 0.654144 6.1:+2379745 MS.gene82912:CDS
TAGGGCTATGGTCAAATGTG+AGG 0.655790 6.1:+2379928 MS.gene82912:CDS
GTTGGAATTAGTGGTGCTGA+AGG 0.660354 6.1:+2383335 MS.gene82912:CDS
TCATATCAAAAGATATTCCG+AGG 0.661085 6.1:+2381646 MS.gene82912:CDS
AAAGAATGTCAGTGATAGTG+CGG 0.661878 6.1:+2381264 MS.gene82912:CDS
GATAAAGGATATCAAAACCA+AGG 0.665429 6.1:-2380191 None:intergenic
GTCAGTGATAGTGCGGACTG+AGG 0.665447 6.1:+2381271 MS.gene82912:CDS
TGATGTCGGTATGCTTCAGG+AGG 0.667840 6.1:+2383301 MS.gene82912:CDS
AGAGAAACAAGGGGACAAGG+AGG 0.681878 6.1:+2382814 MS.gene82912:CDS
CAAGTTATGGGTATTGACTG+GGG 0.687652 6.1:+2382398 MS.gene82912:CDS
GCACCAATCACAGCCACCAA+AGG 0.687747 6.1:-2378633 None:intergenic
AGATGGAAGAAACTTCGTGT+CGG 0.688799 6.1:+2379722 MS.gene82912:CDS
CATATCAATAGAGAAACAAG+GGG 0.692560 6.1:+2382805 MS.gene82912:CDS
AGATTGGAGAAGGAGAACTC+AGG 0.704946 6.1:+2378680 MS.gene82912:CDS
TCTCCACTTCCGTAATACCA+CGG 0.743567 6.1:-2380615 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAGAATTAAAACTTTA+GGG - chr6.1:2381383-2381402 None:intergenic 10.0%
!!! ATCATTATTAATATCATTTT+CGG - chr6.1:2380242-2380261 None:intergenic 10.0%
!!! ATTTTGAAAAAAATACTATT+TGG + chr6.1:2384029-2384048 MS.gene82912:intron 10.0%
!!! TAAAAACATTTTTAATTACA+TGG - chr6.1:2381103-2381122 None:intergenic 10.0%
!!! TAAACCATTTTTTTATATAA+CGG + chr6.1:2381512-2381531 MS.gene82912:intron 10.0%
!! AATGTAAAAAAGTTATATAC+AGG - chr6.1:2384988-2385007 None:intergenic 15.0%
!! GAAAATGATATTAATAATGA+TGG + chr6.1:2380241-2380260 MS.gene82912:CDS 15.0%
!! GTTAATAGAATTAAAACTTT+AGG - chr6.1:2381384-2381403 None:intergenic 15.0%
!! TAAACTCTTATTATAAAGTA+TGG + chr6.1:2383897-2383916 MS.gene82912:intron 15.0%
!! TCATTCCTTAATTATTATTA+AGG + chr6.1:2384479-2384498 MS.gene82912:intron 15.0%
!!! AGTATATACTACAATTTTAT+AGG - chr6.1:2379020-2379039 None:intergenic 15.0%
!!! ATTTTCAACAATTTTTTTGT+AGG + chr6.1:2381475-2381494 MS.gene82912:intron 15.0%
!!! TCAATGTTAATTATTTTGTA+TGG + chr6.1:2379149-2379168 MS.gene82912:intron 15.0%
!!! TTTGATATGATTATTAGTTT+CGG - chr6.1:2381636-2381655 None:intergenic 15.0%
!!! TTTTCAACAATTTTTTTGTA+GGG + chr6.1:2381476-2381495 MS.gene82912:intron 15.0%
!! AAAAAATTGTTGAAAATGCT+TGG - chr6.1:2381472-2381491 None:intergenic 20.0%
!! AAAAGTTCAAAAATGATTCT+AGG + chr6.1:2379276-2379295 MS.gene82912:intron 20.0%
!! AAAATTAAATGCTGTATACT+TGG - chr6.1:2378499-2378518 None:intergenic 20.0%
!! AACAAAAATGCACATAAAAA+TGG - chr6.1:2379345-2379364 None:intergenic 20.0%
!! AATTATTATTAAGGAACTCT+TGG + chr6.1:2384488-2384507 MS.gene82912:intron 20.0%
!! ATAATATACATGCTATGTTA+AGG - chr6.1:2384011-2384030 None:intergenic 20.0%
!! ATGTCATTAAATGATGATAT+AGG + chr6.1:2384562-2384581 MS.gene82912:intron 20.0%
!! ATTAAGTAGAAAACAACTTA+TGG - chr6.1:2384713-2384732 None:intergenic 20.0%
!! ATTTATATGTATCATCAAGA+TGG - chr6.1:2383828-2383847 None:intergenic 20.0%
!! CATGATTTATTAGAAATAGA+AGG - chr6.1:2382475-2382494 None:intergenic 20.0%
!! GAAAATCTTTACTCATTTAT+TGG + chr6.1:2379959-2379978 MS.gene82912:CDS 20.0%
!! GAGTTCCTTAATAATAATTA+AGG - chr6.1:2384487-2384506 None:intergenic 20.0%
!! TAATAAATCATGTCAAATAG+AGG + chr6.1:2382483-2382502 MS.gene82912:intron 20.0%
!! TTATAGAAGAATATCAATGA+TGG + chr6.1:2384138-2384157 MS.gene82912:CDS 20.0%
!! TTCTATAAAAACATTGCATT+TGG + chr6.1:2384288-2384307 MS.gene82912:CDS 20.0%
!!! AAAACATTTGATGATTTAGA+TGG - chr6.1:2383953-2383972 None:intergenic 20.0%
!!! AATGAAAATTTAGTACCTTT+TGG - chr6.1:2384464-2384483 None:intergenic 20.0%
!!! AATGAGTAAAGATTTTCATT+AGG - chr6.1:2379956-2379975 None:intergenic 20.0%
!!! ATGACATTTTTAGTACTAAA+TGG - chr6.1:2384549-2384568 None:intergenic 20.0%
!!! ATGTTAATTATTTTGTATGG+TGG + chr6.1:2379152-2379171 MS.gene82912:intron 20.0%
!!! CTTTGTTTACTTAAAAATAC+AGG + chr6.1:2382338-2382357 MS.gene82912:intron 20.0%
!!! TCTTTTGTATGTGTATATAT+AGG - chr6.1:2382013-2382032 None:intergenic 20.0%
!!! TGTATCCATATTGTAATTTT+CGG + chr6.1:2381134-2381153 MS.gene82912:intron 20.0%
!!! TTGTTTGATTTCTTTAGAAT+CGG - chr6.1:2382085-2382104 None:intergenic 20.0%
! AAACAAATAAATTGCACAGA+AGG + chr6.1:2382099-2382118 MS.gene82912:intron 25.0%
! AAATATGCAGGTTACAAAAT+TGG + chr6.1:2383229-2383248 MS.gene82912:intron 25.0%
! AACTAAAGATTGAAAGATAC+CGG - chr6.1:2379586-2379605 None:intergenic 25.0%
! AATTGTTCAAACAAAGACTT+TGG - chr6.1:2378525-2378544 None:intergenic 25.0%
! ACTTTGTCTCTGATATTTAA+CGG + chr6.1:2383498-2383517 MS.gene82912:intron 25.0%
! AGAAATACCGAATATATATG+TGG + chr6.1:2380052-2380071 MS.gene82912:CDS 25.0%
! AGTTTGTCAAATGTTCAATA+GGG + chr6.1:2380578-2380597 MS.gene82912:CDS 25.0%
! ATATGCTTCAAACCAAAATA+GGG - chr6.1:2384319-2384338 None:intergenic 25.0%
! ATATTCTTCTATAACACCAA+TGG - chr6.1:2384132-2384151 None:intergenic 25.0%
! ATCATATCAATAGAGAAACA+AGG + chr6.1:2382803-2382822 MS.gene82912:CDS 25.0%
! ATTTGAGTAAATAGTCGTTT+AGG + chr6.1:2383404-2383423 MS.gene82912:intron 25.0%
! CACTCCGTTATATAAAAAAA+TGG - chr6.1:2381519-2381538 None:intergenic 25.0%
! CATAATACATTTCTTGATCT+TGG - chr6.1:2380447-2380466 None:intergenic 25.0%
! CGAAAATAATGAGAGAAAAT+TGG - chr6.1:2382877-2382896 None:intergenic 25.0%
! GGTAAAATTTAAGTCATGTT+TGG - chr6.1:2384886-2384905 None:intergenic 25.0%
! TATAAGCACATATCATGTAA+GGG - chr6.1:2384835-2384854 None:intergenic 25.0%
! TATCCTGTATGTTATTACTT+AGG + chr6.1:2384197-2384216 MS.gene82912:intron 25.0%
! TATTAAGTTTCGTGATTACT+TGG + chr6.1:2385021-2385040 MS.gene82912:CDS 25.0%
! TATTCACAAACACAGTTATT+TGG - chr6.1:2384177-2384196 None:intergenic 25.0%
! TCATATCAATAGAGAAACAA+GGG + chr6.1:2382804-2382823 MS.gene82912:CDS 25.0%
! TCTAATTTGAATGAAGAACT+TGG + chr6.1:2380499-2380518 MS.gene82912:CDS 25.0%
! TGGAATATAATTGTTTGTAG+TGG + chr6.1:2383917-2383936 MS.gene82912:intron 25.0%
! TGTATGTGTATATATAGGTA+AGG - chr6.1:2382008-2382027 None:intergenic 25.0%
! TGTATTATGAAGAATCAGAT+AGG + chr6.1:2380458-2380477 MS.gene82912:CDS 25.0%
! TTACTACTTGTGAAATTGTT+TGG - chr6.1:2378892-2378911 None:intergenic 25.0%
! TTGATTTCATAAACTATCCT+AGG - chr6.1:2384747-2384766 None:intergenic 25.0%
! TTTCCTAAGTAATAACATAC+AGG - chr6.1:2384203-2384222 None:intergenic 25.0%
! TTTGTTTGAACAATTCAGAA+GGG + chr6.1:2378530-2378549 MS.gene82912:intron 25.0%
!! ACATGACTTAAATTTTACCA+TGG + chr6.1:2384887-2384906 MS.gene82912:intron 25.0%
!! CTTAATTTGATAAGTTTCCT+AGG + chr6.1:2384727-2384746 MS.gene82912:intron 25.0%
!! TTAGTGGTGTTAAGTAATAA+TGG - chr6.1:2382289-2382308 None:intergenic 25.0%
!! TTCAATCGTATGTATCTTTT+AGG - chr6.1:2384962-2384981 None:intergenic 25.0%
!! TTTACGGACTAATACATATA+GGG - chr6.1:2381425-2381444 None:intergenic 25.0%
!! TTTATCGGATCTATGTTTTT+CGG + chr6.1:2380208-2380227 MS.gene82912:CDS 25.0%
!!! ACACATATTTGCTATTAAGT+AGG - chr6.1:2382248-2382267 None:intergenic 25.0%
!!! CATTTTTTTATATAACGGAG+TGG + chr6.1:2381517-2381536 MS.gene82912:intron 25.0%
!!! CTAAAAGTACTCTTTCTTTA+CGG - chr6.1:2381441-2381460 None:intergenic 25.0%
!!! TCCATCGACAATTTTTTATT+GGG + chr6.1:2381340-2381359 MS.gene82912:intron 25.0%
!!! TTCCATCGACAATTTTTTAT+TGG + chr6.1:2381339-2381358 MS.gene82912:intron 25.0%
!!! TTGGTTTTGATATCCTTTAT+CGG + chr6.1:2380193-2380212 MS.gene82912:CDS 25.0%
!!! TTGTAACCTGCATATTTTTT+TGG - chr6.1:2383226-2383245 None:intergenic 25.0%
AAAAATCTCTGCAAAGGTTT+AGG + chr6.1:2379909-2379928 MS.gene82912:CDS 30.0%
AAAAATGAAGAATCGAAGCA+AGG - chr6.1:2380333-2380352 None:intergenic 30.0%
AAAATATTGCTCCTATGCAA+GGG + chr6.1:2381299-2381318 MS.gene82912:CDS 30.0%
AAAATCTCTGCAAAGGTTTA+GGG + chr6.1:2379910-2379929 MS.gene82912:CDS 30.0%
AAAGATGAACGCATAATGAA+TGG + chr6.1:2380757-2380776 MS.gene82912:CDS 30.0%
AACTTAGATCAGTTCAATGT+CGG + chr6.1:2383724-2383743 MS.gene82912:intron 30.0%
AAGAATTTCTCTATGATGTC+CGG - chr6.1:2380805-2380824 None:intergenic 30.0%
AATAGATAAAGTTGTCTTCC+CGG - chr6.1:2383267-2383286 None:intergenic 30.0%
ACAACTTTATCTATTGGTGA+TGG + chr6.1:2383272-2383291 MS.gene82912:CDS 30.0%
ACTTGTGAAATTGTTTGGAA+GGG - chr6.1:2378887-2378906 None:intergenic 30.0%
AGCTACAAACTAAATCGTAA+AGG - chr6.1:2379060-2379079 None:intergenic 30.0%
ATCGACACATAAAGTGATAT+TGG - chr6.1:2380388-2380407 None:intergenic 30.0%
ATCGAGAAGCAAATTAATGA+GGG + chr6.1:2382936-2382955 MS.gene82912:CDS 30.0%
ATGATAGTTTGATTAGCACA+AGG - chr6.1:2385058-2385077 None:intergenic 30.0%
ATGATCTTGATGCTTCTTAT+GGG + chr6.1:2379203-2379222 MS.gene82912:intron 30.0%
ATGCTTCTTATGGGAATATT+AGG + chr6.1:2379212-2379231 MS.gene82912:intron 30.0%
ATGGCAAGTGATTATTCAAT+CGG + chr6.1:2384067-2384086 MS.gene82912:CDS 30.0%
ATGTGCCGAAAATTACAATA+TGG - chr6.1:2381142-2381161 None:intergenic 30.0%
CAGATATCCATACAACATAA+GGG - chr6.1:2380362-2380381 None:intergenic 30.0%
CATATCAATAGAGAAACAAG+GGG + chr6.1:2382805-2382824 MS.gene82912:CDS 30.0%
CATATGCTTCAAACCAAAAT+AGG - chr6.1:2384320-2384339 None:intergenic 30.0%
CGTATATTACGATCCTAAAA+GGG + chr6.1:2380303-2380322 MS.gene82912:CDS 30.0%
CTAATCAAGCACATAATTAG+TGG - chr6.1:2382305-2382324 None:intergenic 30.0%
CTATAAGCACATATCATGTA+AGG - chr6.1:2384836-2384855 None:intergenic 30.0%
CTTAACTTACTATCGACATT+GGG - chr6.1:2383548-2383567 None:intergenic 30.0%
CTTTGATACAATGATTGCTT+AGG + chr6.1:2382899-2382918 MS.gene82912:intron 30.0%
GAAAAACATAGATCCGATAA+AGG - chr6.1:2380209-2380228 None:intergenic 30.0%
GAAAGAGATTTGATACTTCT+TGG + chr6.1:2381809-2381828 MS.gene82912:CDS 30.0%
GACAACACCACATATATATT+CGG - chr6.1:2380062-2380081 None:intergenic 30.0%
GAGCAAAATTGAGAGAAAAA+TGG + chr6.1:2380141-2380160 MS.gene82912:CDS 30.0%
GAGTTTGTCAAATGTTCAAT+AGG + chr6.1:2380577-2380596 MS.gene82912:CDS 30.0%
GATAAAGGATATCAAAACCA+AGG - chr6.1:2380194-2380213 None:intergenic 30.0%
GCAATACTTAAAGCTGTATA+AGG - chr6.1:2378609-2378628 None:intergenic 30.0%
GGAAAAGTCATTCTTTAAGT+TGG + chr6.1:2383070-2383089 MS.gene82912:CDS 30.0%
GTTAAGCAAGTTTAAACTGT+CGG + chr6.1:2383863-2383882 MS.gene82912:intron 30.0%
GTTGAAACAATGAATCTTGA+TGG + chr6.1:2379830-2379849 MS.gene82912:CDS 30.0%
GTTTGTCAAATGTTCAATAG+GGG + chr6.1:2380579-2380598 MS.gene82912:CDS 30.0%
TAAAATATTGCTCCTATGCA+AGG + chr6.1:2381298-2381317 MS.gene82912:CDS 30.0%
TACAAAAGAACTGAAGATTC+AGG + chr6.1:2382024-2382043 MS.gene82912:intron 30.0%
TACTTGTGAAATTGTTTGGA+AGG - chr6.1:2378888-2378907 None:intergenic 30.0%
TATATGTATCATCAAGATGG+TGG - chr6.1:2383825-2383844 None:intergenic 30.0%
TATGATCTTGATGCTTCTTA+TGG + chr6.1:2379202-2379221 MS.gene82912:intron 30.0%
TCAGATATCCATACAACATA+AGG - chr6.1:2380363-2380382 None:intergenic 30.0%
TCAGCTTAGAATCTCTTAAA+AGG - chr6.1:2380033-2380052 None:intergenic 30.0%
TCATATCAAAAGATATTCCG+AGG + chr6.1:2381646-2381665 MS.gene82912:CDS 30.0%
TCTTAACTTACTATCGACAT+TGG - chr6.1:2383549-2383568 None:intergenic 30.0%
TGATGTGATTAAAGTGTACA+AGG + chr6.1:2379745-2379764 MS.gene82912:CDS 30.0%
TGGTAAAAACCATACATTTG+TGG + chr6.1:2379694-2379713 MS.gene82912:CDS 30.0%
TTAACTTACTATCGACATTG+GGG - chr6.1:2383547-2383566 None:intergenic 30.0%
TTACATTCTCTTTAGTACCT+TGG + chr6.1:2380174-2380193 MS.gene82912:CDS 30.0%
TTCAGTGTAATTACAAGTGT+CGG - chr6.1:2379487-2379506 None:intergenic 30.0%
TTCTTATGGGAATATTAGGT+TGG + chr6.1:2379216-2379235 MS.gene82912:intron 30.0%
TTGAGGATAGACTTCAAAAA+GGG + chr6.1:2381843-2381862 MS.gene82912:CDS 30.0%
TTTGTCAAATGTTCAATAGG+GGG + chr6.1:2380580-2380599 MS.gene82912:CDS 30.0%
! ACAGTTTAAACTTGCTTAAC+TGG - chr6.1:2383863-2383882 None:intergenic 30.0%
! CATTTGGATTTACCCTATTT+TGG + chr6.1:2384304-2384323 MS.gene82912:CDS 30.0%
! CTTTACGGACTAATACATAT+AGG - chr6.1:2381426-2381445 None:intergenic 30.0%
! CTTTGTTTGAACAATTCAGA+AGG + chr6.1:2378529-2378548 MS.gene82912:intron 30.0%
! GTATTGCTGATGTAATTTGT+TGG + chr6.1:2379112-2379131 MS.gene82912:intron 30.0%
! TACGAGTCACAATTTTTAAC+CGG + chr6.1:2379564-2379583 MS.gene82912:intron 30.0%
! TACTAAATGGTCTTGACTTA+TGG - chr6.1:2384536-2384555 None:intergenic 30.0%
! TCAATTTTGCTCCTTTTTGA+TGG - chr6.1:2380133-2380152 None:intergenic 30.0%
! TTCTTTTCTTTAATGCCCTT+AGG + chr6.1:2378717-2378736 MS.gene82912:intron 30.0%
! TTGTGTTTCTTTTAGTCCTT+TGG + chr6.1:2378581-2378600 MS.gene82912:intron 30.0%
! TTTAGCTTAGTTTCATCGAT+TGG + chr6.1:2381072-2381091 MS.gene82912:intron 30.0%
!! AAATACTATTTGGTGTCTAC+AGG + chr6.1:2384039-2384058 MS.gene82912:intron 30.0%
!! ATTGGAACTTTTGAGTATGA+AGG + chr6.1:2379977-2379996 MS.gene82912:CDS 30.0%
!! CATTTGGCTTGATAATTGAT+GGG + chr6.1:2383015-2383034 MS.gene82912:CDS 30.0%
!! TCATTTGGCTTGATAATTGA+TGG + chr6.1:2383014-2383033 MS.gene82912:CDS 30.0%
!!! CCTTTTAGGATCGTAATATA+CGG - chr6.1:2380305-2380324 None:intergenic 30.0%
!!! TCGGTTTTGAGTTTTTCATT+AGG + chr6.1:2380941-2380960 MS.gene82912:CDS 30.0%
!!! TGATAAATGCTTTTTTCGAC+CGG + chr6.1:2379627-2379646 MS.gene82912:intron 30.0%
AAATTGGTGAAGTTGGAAAC+CGG + chr6.1:2383245-2383264 MS.gene82912:CDS 35.0%
AACAGAAAGGTTCAGGTATA+TGG + chr6.1:2379674-2379693 MS.gene82912:CDS 35.0%
AACGCATAATGAATGGACAA+TGG + chr6.1:2380764-2380783 MS.gene82912:CDS 35.0%
AACTTGATCCACAAGAAACT+TGG + chr6.1:2384221-2384240 MS.gene82912:intron 35.0%
ACAAAAGAGAGTTCCAATAC+AGG + chr6.1:2382978-2382997 MS.gene82912:CDS 35.0%
ACGCCTTCTAGATATAGAAA+CGG - chr6.1:2385093-2385112 None:intergenic 35.0%
ATACATTTGTGGAGACAAGA+TGG + chr6.1:2379705-2379724 MS.gene82912:CDS 35.0%
ATCTTGTCTCCACAAATGTA+TGG - chr6.1:2379706-2379725 None:intergenic 35.0%
ATGGTATGCATAAGTTGCTT+CGG - chr6.1:2379326-2379345 None:intergenic 35.0%
CATATACCAATCGTTGTAAG+CGG - chr6.1:2384361-2384380 None:intergenic 35.0%
CATCAGCCAAAAAAATATGC+AGG + chr6.1:2383217-2383236 MS.gene82912:intron 35.0%
CATCGAGAAGCAAATTAATG+AGG + chr6.1:2382935-2382954 MS.gene82912:CDS 35.0%
CCGTATATTACGATCCTAAA+AGG + chr6.1:2380302-2380321 MS.gene82912:CDS 35.0%
CTAATCCAAACAAGACCTAA+GGG - chr6.1:2378735-2378754 None:intergenic 35.0%
GAATCATGAAAGCGGAAAAA+AGG + chr6.1:2380993-2381012 MS.gene82912:CDS 35.0%
GAGATGAAAAATCTCTGCAA+AGG + chr6.1:2379903-2379922 MS.gene82912:CDS 35.0%
GATATTGGAGTTGGAATTAG+TGG + chr6.1:2383326-2383345 MS.gene82912:CDS 35.0%
GCCCAATAAAAAATTGTCGA+TGG - chr6.1:2381344-2381363 None:intergenic 35.0%
GGGAAGACAACTTTATCTAT+TGG + chr6.1:2383266-2383285 MS.gene82912:CDS 35.0%
GGTTACAAAATTGGTGAAGT+TGG + chr6.1:2383238-2383257 MS.gene82912:intron 35.0%
GTCTTGTCTAAGTAAACTAC+AGG - chr6.1:2382747-2382766 None:intergenic 35.0%
GTTAAGAACATATGTGTGTG+AGG - chr6.1:2383611-2383630 None:intergenic 35.0%
GTTGAGGATAGACTTCAAAA+AGG + chr6.1:2381842-2381861 MS.gene82912:CDS 35.0%
TACAGGCATACCTGTTAAAA+GGG - chr6.1:2382730-2382749 None:intergenic 35.0%
TGAACATTTGACAAACTCCA+TGG - chr6.1:2380575-2380594 None:intergenic 35.0%
TGAAGTAGAAAGTTACGAGT+AGG + chr6.1:2379087-2379106 MS.gene82912:intron 35.0%
TGAGGATAGACTTCAAAAAG+GGG + chr6.1:2381844-2381863 MS.gene82912:CDS 35.0%
TTATGAAGAATCAGATAGGC+CGG + chr6.1:2380462-2380481 MS.gene82912:CDS 35.0%
TTGATTAGCACAAGGTTTCT+TGG - chr6.1:2385050-2385069 None:intergenic 35.0%
TTTGAAAGGCTCTCACAATA+CGG + chr6.1:2381596-2381615 MS.gene82912:CDS 35.0%
! AAAGAATGTCAGTGATAGTG+CGG + chr6.1:2381264-2381283 MS.gene82912:CDS 35.0%
! ATGATGGAAGTTACAGAAGA+TGG + chr6.1:2380257-2380276 MS.gene82912:CDS 35.0%
! ATGGATTAATGAACCACATC+CGG + chr6.1:2380783-2380802 MS.gene82912:CDS 35.0%
! ATTTTGCTCCTTTTTGATGG+AGG - chr6.1:2380130-2380149 None:intergenic 35.0%
! CATGAGTTGAATCATGAAAG+CGG + chr6.1:2380985-2381004 MS.gene82912:CDS 35.0%
! TAATATACGGTTGTTTCGTC+CGG - chr6.1:2380292-2380311 None:intergenic 35.0%
! TTTAAGTATTGCTGCACCTT+TGG + chr6.1:2378617-2378636 MS.gene82912:CDS 35.0%
!! ATCAAGTTATGGGTATTGAC+TGG + chr6.1:2382396-2382415 MS.gene82912:CDS 35.0%
!! ATCATCAAGATGGTGGAATA+TGG - chr6.1:2383818-2383837 None:intergenic 35.0%
!! ATGTATCGAAAAGCTTGCTA+AGG + chr6.1:2382368-2382387 MS.gene82912:CDS 35.0%
!! CGTTCGAGTATTTTTACTTC+AGG + chr6.1:2381881-2381900 MS.gene82912:intron 35.0%
!! GGAATATTAGGTTGGAAACT+AGG + chr6.1:2379224-2379243 MS.gene82912:intron 35.0%
!! TAAGCTGTTTTCATACGCTA+TGG + chr6.1:2378842-2378861 MS.gene82912:intron 35.0%
!! TACGATTTAGTTTGTAGCTG+TGG + chr6.1:2379061-2379080 MS.gene82912:intron 35.0%
!! TCAAGTTATGGGTATTGACT+GGG + chr6.1:2382397-2382416 MS.gene82912:CDS 35.0%
!! TTTCTGTTGATGATTTGCGT+TGG + chr6.1:2379370-2379389 MS.gene82912:intron 35.0%
!!! GAAAGAGTACTTTTAGTCCT+TGG + chr6.1:2381445-2381464 MS.gene82912:intron 35.0%
AAAACACCTAGAGCGATTAC+CGG - chr6.1:2384414-2384433 None:intergenic 40.0%
AAACATGCACCTCCAATTGA+GGG + chr6.1:2384630-2384649 MS.gene82912:intron 40.0%
AATAGAGAAACAAGGGGACA+AGG + chr6.1:2382811-2382830 MS.gene82912:CDS 40.0%
AATCCGAACATACCCTCAAT+TGG - chr6.1:2384645-2384664 None:intergenic 40.0%
AATTGGTGAAGTTGGAAACC+GGG + chr6.1:2383246-2383265 MS.gene82912:CDS 40.0%
ACAACAAACGCTCCAGAAAA+CGG - chr6.1:2384099-2384118 None:intergenic 40.0%
ACCATATTGTCTGACAAGAC+CGG + chr6.1:2380532-2380551 MS.gene82912:CDS 40.0%
AGAACTATCCTCTCCTGTAT+TGG - chr6.1:2382994-2383013 None:intergenic 40.0%
AGATGGAAGAAACTTCGTGT+CGG + chr6.1:2379722-2379741 MS.gene82912:CDS 40.0%
ATCAAAAGATATTCCGAGGC+AGG + chr6.1:2381650-2381669 MS.gene82912:CDS 40.0%
ATCAGTGACCAAGTTTCTTG+TGG - chr6.1:2384232-2384251 None:intergenic 40.0%
ATGGAAACTGCAGTCAACAT+AGG + chr6.1:2382426-2382445 MS.gene82912:CDS 40.0%
CACCCGTTTCTATATCTAGA+AGG + chr6.1:2385087-2385106 MS.gene82912:CDS 40.0%
CAGAAGATGGTATCTTCATC+CGG + chr6.1:2380270-2380289 MS.gene82912:CDS 40.0%
CATGCAGTGTGATGTTTGAA+AGG + chr6.1:2381582-2381601 MS.gene82912:intron 40.0%
CCTCTATATCCTGAAGAAAC+CGG - chr6.1:2379649-2379668 None:intergenic 40.0%
CGCCTTCTAGATATAGAAAC+GGG - chr6.1:2385092-2385111 None:intergenic 40.0%
CTAAAGAAGCTGTGGAAGAT+TGG + chr6.1:2378664-2378683 MS.gene82912:CDS 40.0%
CTACAGGCATACCTGTTAAA+AGG - chr6.1:2382731-2382750 None:intergenic 40.0%
CTGATCTAAGTTTGACGACT+AGG - chr6.1:2383716-2383735 None:intergenic 40.0%
CTGTTGATCCTCCATCAAAA+AGG + chr6.1:2380119-2380138 MS.gene82912:CDS 40.0%
CTTTCAAACATCACACTGCA+TGG - chr6.1:2381584-2381603 None:intergenic 40.0%
GAAAGCAGAAGAAGATCAGA+AGG - chr6.1:2379782-2379801 None:intergenic 40.0%
GAAAGCTCGCGTAAGTATTA+TGG + chr6.1:2383139-2383158 MS.gene82912:intron 40.0%
GAAGCATATGCTTCATTCTC+CGG + chr6.1:2384330-2384349 MS.gene82912:CDS 40.0%
GACATTACCTCACACATTTG+AGG + chr6.1:2383459-2383478 MS.gene82912:intron 40.0%
GACTCTCAGAAGACAGTTAA+GGG + chr6.1:2380724-2380743 MS.gene82912:CDS 40.0%
GATAATTGATGGGAGGTCAT+TGG + chr6.1:2383025-2383044 MS.gene82912:CDS 40.0%
GCTAATCCAAACAAGACCTA+AGG - chr6.1:2378736-2378755 None:intergenic 40.0%
GGAGAGGATAGTTCTTCATT+TGG + chr6.1:2382999-2383018 MS.gene82912:CDS 40.0%
GGCTTCATAGGAAATTTCTC+CGG - chr6.1:2380878-2380897 None:intergenic 40.0%
GGTGATGCTAACATGGTAAA+AGG - chr6.1:2381037-2381056 None:intergenic 40.0%
GTATTCTCTCGACAACTCTA+TGG + chr6.1:2383049-2383068 MS.gene82912:CDS 40.0%
TAAACATGCACCTCCAATTG+AGG + chr6.1:2384629-2384648 MS.gene82912:intron 40.0%
TAAGGCGGGAATCAAGTTAT+GGG + chr6.1:2382386-2382405 MS.gene82912:CDS 40.0%
TACTATGGCTAAAGAAGCTG+TGG + chr6.1:2378656-2378675 MS.gene82912:CDS 40.0%
TACTTTGACATGCAACTCCA+TGG + chr6.1:2380555-2380574 MS.gene82912:CDS 40.0%
TAGAGTTCTTAAACCTGCCT+CGG - chr6.1:2381666-2381685 None:intergenic 40.0%
TATAGAGGCGAACAACAGAA+AGG + chr6.1:2379661-2379680 MS.gene82912:CDS 40.0%
TATTACGATCCTAAAAGGGC+AGG + chr6.1:2380307-2380326 MS.gene82912:CDS 40.0%
TCATGAAAGCGGAAAAAAGG+TGG + chr6.1:2380996-2381015 MS.gene82912:CDS 40.0%
TCTTGATCCTCAAATGTGTG+AGG - chr6.1:2383469-2383488 None:intergenic 40.0%
TGACAACACTGGAACTTTCT+CGG + chr6.1:2382671-2382690 MS.gene82912:intron 40.0%
TGGAAACTGCAGTCAACATA+GGG + chr6.1:2382427-2382446 MS.gene82912:CDS 40.0%
TGTGATGCAACATAACACCA+TGG - chr6.1:2384907-2384926 None:intergenic 40.0%
TGTGTTCTTTACTTCGCTAC+CGG + chr6.1:2384392-2384411 MS.gene82912:CDS 40.0%
TGTTGAAAATGCTTGGACCA+AGG - chr6.1:2381465-2381484 None:intergenic 40.0%
TTGACTGCCCTTATGTTGTA+TGG + chr6.1:2380352-2380371 MS.gene82912:CDS 40.0%
! AAAGCTGTATAAGGTGCCAA+AGG - chr6.1:2378600-2378619 None:intergenic 40.0%
! AATCGGACAATTCCGTTTTC+TGG + chr6.1:2384084-2384103 MS.gene82912:CDS 40.0%
! AATGAAGGTACACAACCTTG+CGG + chr6.1:2382841-2382860 MS.gene82912:intron 40.0%
! ATTATCGGCTGGATGTTGAA+CGG + chr6.1:2385141-2385160 MS.gene82912:CDS 40.0%
! CAACATAGGGTACTTCAACA+AGG + chr6.1:2382440-2382459 MS.gene82912:intron 40.0%
! CGAAGAAGAGTATAAGCAGT+GGG + chr6.1:2381709-2381728 MS.gene82912:CDS 40.0%
! GCAAGCTTTTCGATACATTC+AGG - chr6.1:2382366-2382385 None:intergenic 40.0%
! TAGTACCTTTTGGCATAGTC+TGG - chr6.1:2384454-2384473 None:intergenic 40.0%
! TTGGAATTAGTGGTGCTGAA+GGG + chr6.1:2383336-2383355 MS.gene82912:CDS 40.0%
! TTGGCTTGATAATTGATGGG+AGG + chr6.1:2383018-2383037 MS.gene82912:CDS 40.0%
!! ATCAGTTGGTGATGCTAACA+TGG - chr6.1:2381044-2381063 None:intergenic 40.0%
!! CAAGTTATGGGTATTGACTG+GGG + chr6.1:2382398-2382417 MS.gene82912:CDS 40.0%
!! TAATGCCCTTAGGTCTTGTT+TGG + chr6.1:2378727-2378746 MS.gene82912:intron 40.0%
!! TATCGAAAAGCTTGCTAAGG+CGG + chr6.1:2382371-2382390 MS.gene82912:CDS 40.0%
!! TGTGGTGTTGTCATCTTTAC+CGG + chr6.1:2380070-2380089 MS.gene82912:CDS 40.0%
!!! CTTTCTGTTTTGGTGAAGAC+CGG - chr6.1:2383124-2383143 None:intergenic 40.0%
!!! TTTTCTGGAGCGTTTGTTGT+TGG + chr6.1:2384099-2384118 MS.gene82912:CDS 40.0%
!!! TTTTTTCGACCGGTTTCTTC+AGG + chr6.1:2379637-2379656 MS.gene82912:intron 40.0%
AAAGCGGAAAAAAGGTGGAC+AGG + chr6.1:2381001-2381020 MS.gene82912:CDS 45.0%
AAGCTGTGGAAGATTGGAGA+AGG + chr6.1:2378670-2378689 MS.gene82912:CDS 45.0%
ACTCTTCTTCGCCAACTTCA+CGG - chr6.1:2381700-2381719 None:intergenic 45.0%
AGAAACTACCACTAGGCACT+AGG - chr6.1:2378973-2378992 None:intergenic 45.0%
AGAGAGTTCCAATACAGGAG+AGG + chr6.1:2382983-2383002 MS.gene82912:CDS 45.0%
AGAGTATAAGCAGTGGGACA+AGG + chr6.1:2381715-2381734 MS.gene82912:CDS 45.0%
AGATTGGAGAAGGAGAACTC+AGG + chr6.1:2378680-2378699 MS.gene82912:CDS 45.0%
AGGATCTGTTGCAACGAAAG+AGG - chr6.1:2380013-2380032 None:intergenic 45.0%
AGGCATACCTGTTAAAAGGG+AGG - chr6.1:2382727-2382746 None:intergenic 45.0%
ATGACAAATGCGGCTTCATC+CGG - chr6.1:2380907-2380926 None:intergenic 45.0%
ATGCTTCAGGAGGCTGATAT+TGG + chr6.1:2383311-2383330 MS.gene82912:CDS 45.0%
ATTGGATGCAAAAACCCGCA+AGG - chr6.1:2382859-2382878 None:intergenic 45.0%
CATACCTGTTAAAAGGGAGG+GGG - chr6.1:2382724-2382743 None:intergenic 45.0%
CATCACTTTCGTGTCATGAC+CGG - chr6.1:2380092-2380111 None:intergenic 45.0%
CCGGTTTCTTCAGGATATAG+AGG + chr6.1:2379646-2379665 MS.gene82912:intron 45.0%
CCTAGTGGTAGTTTCTGCAA+AGG + chr6.1:2378977-2378996 MS.gene82912:intron 45.0%
CCTTGCAGCTATGACAAATG+CGG - chr6.1:2380917-2380936 None:intergenic 45.0%
CCTTTGCAGAAACTACCACT+AGG - chr6.1:2378980-2378999 None:intergenic 45.0%
CGATCTGTGATTGACAACAC+TGG + chr6.1:2382660-2382679 MS.gene82912:intron 45.0%
CGCATTTGTCATAGCTGCAA+GGG + chr6.1:2380915-2380934 MS.gene82912:CDS 45.0%
CTAAGGCGGGAATCAAGTTA+TGG + chr6.1:2382385-2382404 MS.gene82912:CDS 45.0%
CTGTTACGAGCTATGAAGCA+CGG + chr6.1:2379411-2379430 MS.gene82912:intron 45.0%
CTTTCGTCAAGCTATGAGGA+CGG + chr6.1:2379797-2379816 MS.gene82912:CDS 45.0%
GAATGATGTCGGTATGCTTC+AGG + chr6.1:2383298-2383317 MS.gene82912:CDS 45.0%
GACAACACTGGAACTTTCTC+GGG + chr6.1:2382672-2382691 MS.gene82912:intron 45.0%
GACAGCATGTGAAACGTTCA+AGG - chr6.1:2383431-2383450 None:intergenic 45.0%
GACTCGTAACCTATGAAGCA+CGG - chr6.1:2379552-2379571 None:intergenic 45.0%
GCATACCTGTTAAAAGGGAG+GGG - chr6.1:2382725-2382744 None:intergenic 45.0%
GCTAAACCAAGCGTATCAGT+TGG - chr6.1:2381058-2381077 None:intergenic 45.0%
GGACTCTCAGAAGACAGTTA+AGG + chr6.1:2380723-2380742 MS.gene82912:CDS 45.0%
GGAGTTGCATGTCAAAGTAC+CGG - chr6.1:2380554-2380573 None:intergenic 45.0%
GGCATACCTGTTAAAAGGGA+GGG - chr6.1:2382726-2382745 None:intergenic 45.0%
GTAATCACGTACCGTGAAGT+TGG + chr6.1:2381686-2381705 MS.gene82912:CDS 45.0%
GTGCTTCTGTCATATGTTGC+CGG + chr6.1:2383102-2383121 MS.gene82912:CDS 45.0%
TAACCTATGAAGCACGGACA+CGG - chr6.1:2379546-2379565 None:intergenic 45.0%
TAGGGCTATGGTCAAATGTG+AGG + chr6.1:2379928-2379947 MS.gene82912:CDS 45.0%
TCACAGATCGCAACAAACAG+AGG - chr6.1:2382650-2382669 None:intergenic 45.0%
TCAGTATGGCCGTGGTATTA+CGG + chr6.1:2380606-2380625 MS.gene82912:CDS 45.0%
TCTCCACTTCCGTAATACCA+CGG - chr6.1:2380618-2380637 None:intergenic 45.0%
TCTGCTTTCGTCAAGCTATG+AGG + chr6.1:2379793-2379812 MS.gene82912:CDS 45.0%
TGGTATTACGGAAGTGGAGA+AGG + chr6.1:2380618-2380637 MS.gene82912:CDS 45.0%
TGTTGTTGGTACATGGCCAT+TGG + chr6.1:2384113-2384132 MS.gene82912:CDS 45.0%
TTCAGCCAGACTATGCCAAA+AGG + chr6.1:2384446-2384465 MS.gene82912:CDS 45.0%
TTCAGCTGGACTCGGATTAT+CGG + chr6.1:2385126-2385145 MS.gene82912:CDS 45.0%
TTCTCTATGATGTCCGGATG+TGG - chr6.1:2380799-2380818 None:intergenic 45.0%
! AAGACGAGTTGTCGCTTCTA+AGG - chr6.1:2379882-2379901 None:intergenic 45.0%
! AAGTATTGCTGCACCTTTGG+TGG + chr6.1:2378620-2378639 MS.gene82912:CDS 45.0%
! ACCGGTCTTGTCAGACAATA+TGG - chr6.1:2380536-2380555 None:intergenic 45.0%
! ATGAAGGTACACAACCTTGC+GGG + chr6.1:2382842-2382861 MS.gene82912:intron 45.0%
! CCTCCAATTGAGGGTATGTT+CGG + chr6.1:2384639-2384658 MS.gene82912:intron 45.0%
! CCTGATGTAGATAAAGCGTC+CGG + chr6.1:2380856-2380875 MS.gene82912:CDS 45.0%
! CTTACGCGAGCTTTCTGTTT+TGG - chr6.1:2383134-2383153 None:intergenic 45.0%
! GCGAAGAAGAGTATAAGCAG+TGG + chr6.1:2381708-2381727 MS.gene82912:CDS 45.0%
! GTCTGCTGCTAAAGAGGTTT+TGG - chr6.1:2381753-2381772 None:intergenic 45.0%
! GTTGGAATTAGTGGTGCTGA+AGG + chr6.1:2383335-2383354 MS.gene82912:CDS 45.0%
! TCTGCAAAGGTTTAGGGCTA+TGG + chr6.1:2379916-2379935 MS.gene82912:CDS 45.0%
! TTGGTGTCTACAGGCTGTAA+TGG + chr6.1:2384048-2384067 MS.gene82912:intron 45.0%
!! ATCGAAAAGCTTGCTAAGGC+GGG + chr6.1:2382372-2382391 MS.gene82912:CDS 45.0%
!! CGCTCTAGGTGTTTTTGATC+AGG + chr6.1:2384419-2384438 MS.gene82912:CDS 45.0%
!! GAGCGTTTGTTGTTGGTACA+TGG + chr6.1:2384106-2384125 MS.gene82912:CDS 45.0%
!! GGTATTGACTGGGGACAAAA+TGG + chr6.1:2382407-2382426 MS.gene82912:CDS 45.0%
!! TACAAGTGTCGGTGTCATGT+CGG - chr6.1:2379476-2379495 None:intergenic 45.0%
!! TCAATAGGGGGTGTTCAGTA+TGG + chr6.1:2380592-2380611 MS.gene82912:CDS 45.0%
!!! AAATTTTTTCATATAAATAA+TGG + chr6.1:2383174-2383193 MS.gene82912:intron 5.0%
AACTACCACTAGGCACTAGG+AGG - chr6.1:2378970-2378989 None:intergenic 50.0%
AATCCGAGTCCAGCTGAAGA+GGG - chr6.1:2385124-2385143 None:intergenic 50.0%
ACTCCGTGATCAACCACTTG+TGG - chr6.1:2382125-2382144 None:intergenic 50.0%
AGAGAAACAAGGGGACAAGG+AGG + chr6.1:2382814-2382833 MS.gene82912:CDS 50.0%
AGGCCACAAGTGGTTGATCA+CGG + chr6.1:2382119-2382138 MS.gene82912:intron 50.0%
ATCGTTGTAAGCGGCTTGAC+CGG - chr6.1:2384352-2384371 None:intergenic 50.0%
ATCTCGGTCTGCTGCTAAAG+AGG - chr6.1:2381759-2381778 None:intergenic 50.0%
ATTGCACAGAAGGCCACAAG+TGG + chr6.1:2382109-2382128 MS.gene82912:intron 50.0%
CAGGAGGCTGATATTGGAGT+TGG + chr6.1:2383317-2383336 MS.gene82912:CDS 50.0%
CCGAACATACCCTCAATTGG+AGG - chr6.1:2384642-2384661 None:intergenic 50.0%
CCGCATTTGTCATAGCTGCA+AGG + chr6.1:2380914-2380933 MS.gene82912:CDS 50.0%
CCGGACGCTTTATCTACATC+AGG - chr6.1:2380859-2380878 None:intergenic 50.0%
CGGAAAAAAGGTGGACAGGT+TGG + chr6.1:2381005-2381024 MS.gene82912:intron 50.0%
CGTGCTTCATAGCTCGTAAC+AGG - chr6.1:2379413-2379432 None:intergenic 50.0%
CTGCATCCACAAGTGCATCT+CGG - chr6.1:2381775-2381794 None:intergenic 50.0%
CTTCTCGATGCTTTCACGAG+AGG - chr6.1:2382925-2382944 None:intergenic 50.0%
GAGTCAGAGTAGCGATGTTG+TGG + chr6.1:2380702-2380721 MS.gene82912:CDS 50.0%
GCAAAGGACAGGGAATCTGA+AGG + chr6.1:2380655-2380674 MS.gene82912:CDS 50.0%
GCATCACCAACTGATACGCT+TGG + chr6.1:2381049-2381068 MS.gene82912:intron 50.0%
GGCGAACAACAGAAAGGTTC+AGG + chr6.1:2379667-2379686 MS.gene82912:CDS 50.0%
GTCAAGCCGCTTACAACGAT+TGG + chr6.1:2384352-2384371 MS.gene82912:CDS 50.0%
GTCATAGCTGCAAGGGAACT+CGG + chr6.1:2380922-2380941 MS.gene82912:CDS 50.0%
GTGGGACAAGGAGTTCTCAA+AGG + chr6.1:2381727-2381746 MS.gene82912:CDS 50.0%
TAATCCGAGTCCAGCTGAAG+AGG - chr6.1:2385125-2385144 None:intergenic 50.0%
TAGAGAACACCCTCTTCAGC+TGG + chr6.1:2385112-2385131 MS.gene82912:CDS 50.0%
TATGAAGCACGGACACTCCT+CGG + chr6.1:2379422-2379441 MS.gene82912:intron 50.0%
TGATGTCGGTATGCTTCAGG+AGG + chr6.1:2383301-2383320 MS.gene82912:CDS 50.0%
TGCTAGGAGAGCAAAGGACA+GGG + chr6.1:2380645-2380664 MS.gene82912:CDS 50.0%
TTAGATGTGTGCGCATGAGC+CGG - chr6.1:2380484-2380503 None:intergenic 50.0%
TTCCTATGAAGCCGAGTCAC+CGG + chr6.1:2380885-2380904 MS.gene82912:CDS 50.0%
TTGCTAGGAGAGCAAAGGAC+AGG + chr6.1:2380644-2380663 MS.gene82912:CDS 50.0%
! AGTGCTGCTGTAGCTGCTAT+TGG - chr6.1:2382595-2382614 None:intergenic 50.0%
! GGACAAGGAGGCTCTAATGA+AGG + chr6.1:2382826-2382845 MS.gene82912:CDS 50.0%
! GGTGATGGTGCGAATGATGT+CGG + chr6.1:2383287-2383306 MS.gene82912:CDS 50.0%
! TACACCAGCCACTTTGTTGC+CGG - chr6.1:2382170-2382189 None:intergenic 50.0%
! TGTTCCCCCTCCCTTTTAAC+AGG + chr6.1:2382717-2382736 MS.gene82912:intron 50.0%
!! AAGTGGAGAAGGCACTTGCT+AGG + chr6.1:2380629-2380648 MS.gene82912:CDS 50.0%
!! GGCTGTGATTGGTGCTACTA+TGG + chr6.1:2378641-2378660 MS.gene82912:CDS 50.0%
ACACCCTCTTCAGCTGGACT+CGG + chr6.1:2385118-2385137 MS.gene82912:CDS 55.0%
ACCACTAGGCACTAGGAGGA+GGG - chr6.1:2378966-2378985 None:intergenic 55.0%
ACCTGTCTGCACCCTTGCAT+AGG - chr6.1:2381313-2381332 None:intergenic 55.0%
AGCAGACCGAGATGCACTTG+TGG + chr6.1:2381766-2381785 MS.gene82912:CDS 55.0%
CACTTTGTTGCCGGAGACGT+AGG - chr6.1:2382161-2382180 None:intergenic 55.0%
CTACGTCTCCGGCAACAAAG+TGG + chr6.1:2382159-2382178 MS.gene82912:intron 55.0%
GCACCAATCACAGCCACCAA+AGG - chr6.1:2378636-2378655 None:intergenic 55.0%
GCCAATTGTGCCTACGTCTC+CGG + chr6.1:2382148-2382167 MS.gene82912:intron 55.0%
GGATGCAGCAGCTGACAAGA+TGG + chr6.1:2381787-2381806 MS.gene82912:CDS 55.0%
TACCACTAGGCACTAGGAGG+AGG - chr6.1:2378967-2378986 None:intergenic 55.0%
TCGCTACCGGTAATCGCTCT+AGG + chr6.1:2384405-2384424 MS.gene82912:CDS 55.0%
TCTTGGCGCTACAGCAGTTG+AGG + chr6.1:2381826-2381845 MS.gene82912:CDS 55.0%
TGGCCGTGGTATTACGGAAG+TGG + chr6.1:2380612-2380631 MS.gene82912:CDS 55.0%
TGTCCGTGTCCGTGCTTCAT+AGG + chr6.1:2379540-2379559 MS.gene82912:intron 55.0%
! ATCCGGTGACTCGGCTTCAT+AGG - chr6.1:2380890-2380909 None:intergenic 55.0%
! GAAGCAAGGCCTGCCCTTTT+AGG - chr6.1:2380319-2380338 None:intergenic 55.0%
! GCACCTTTGGTGGCTGTGAT+TGG + chr6.1:2378630-2378649 MS.gene82912:CDS 55.0%
! GGCACTTGCTAGGAGAGCAA+AGG + chr6.1:2380639-2380658 MS.gene82912:CDS 55.0%
! GTCAGTGATAGTGCGGACTG+AGG + chr6.1:2381271-2381290 MS.gene82912:CDS 55.0%
! TAGTGGTGCTGAAGGGATGC+AGG + chr6.1:2383343-2383362 MS.gene82912:CDS 55.0%
! TCCTATGCAAGGGTGCAGAC+AGG + chr6.1:2381309-2381328 MS.gene82912:CDS 55.0%
ACCCTCCTCCTAGTGCCTAG+TGG + chr6.1:2378962-2378981 MS.gene82912:intron 60.0%
ACGGAGACACGCCTAATCCG+AGG - chr6.1:2379442-2379461 None:intergenic 60.0%
CATGTCGGCCGTGTCTGACA+CGG - chr6.1:2379461-2379480 None:intergenic 60.0%
GCACGGACACTCCTCGGATT+AGG + chr6.1:2379428-2379447 MS.gene82912:intron 60.0%
GCCGGAGACGTAGGCACAAT+TGG - chr6.1:2382152-2382171 None:intergenic 60.0%
GCGTGTCTCCGTGTCAGACA+CGG + chr6.1:2379450-2379469 MS.gene82912:intron 60.0%
GCTGGACTCGGATTATCGGC+TGG + chr6.1:2385130-2385149 MS.gene82912:CDS 60.0%
GTCTCCGGCAACAAAGTGGC+TGG + chr6.1:2382163-2382182 MS.gene82912:intron 60.0%
TGCGGCTTCATCCGGTGACT+CGG - chr6.1:2380899-2380918 None:intergenic 60.0%
!! GGGGGTGTTCAGTATGGCCG+TGG + chr6.1:2380598-2380617 MS.gene82912:CDS 65.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 2378472 2385172 2378472 ID=MS.gene82912
chr6.1 mRNA 2378472 2385172 2378472 ID=MS.gene82912.t1;Parent=MS.gene82912
chr6.1 exon 2378472 2378499 2378472 ID=MS.gene82912.t1.exon1;Parent=MS.gene82912.t1
chr6.1 CDS 2378472 2378499 2378472 ID=cds.MS.gene82912.t1;Parent=MS.gene82912.t1
chr6.1 exon 2378616 2378701 2378616 ID=MS.gene82912.t1.exon2;Parent=MS.gene82912.t1
chr6.1 CDS 2378616 2378701 2378616 ID=cds.MS.gene82912.t1;Parent=MS.gene82912.t1
chr6.1 exon 2379659 2381022 2379659 ID=MS.gene82912.t1.exon3;Parent=MS.gene82912.t1
chr6.1 CDS 2379659 2381022 2379659 ID=cds.MS.gene82912.t1;Parent=MS.gene82912.t1
chr6.1 exon 2381220 2381330 2381220 ID=MS.gene82912.t1.exon4;Parent=MS.gene82912.t1
chr6.1 CDS 2381220 2381330 2381220 ID=cds.MS.gene82912.t1;Parent=MS.gene82912.t1
chr6.1 exon 2381589 2381865 2381589 ID=MS.gene82912.t1.exon5;Parent=MS.gene82912.t1
chr6.1 CDS 2381589 2381865 2381589 ID=cds.MS.gene82912.t1;Parent=MS.gene82912.t1
chr6.1 exon 2382360 2382448 2382360 ID=MS.gene82912.t1.exon6;Parent=MS.gene82912.t1
chr6.1 CDS 2382360 2382448 2382360 ID=cds.MS.gene82912.t1;Parent=MS.gene82912.t1
chr6.1 exon 2382739 2382847 2382739 ID=MS.gene82912.t1.exon7;Parent=MS.gene82912.t1
chr6.1 CDS 2382739 2382847 2382739 ID=cds.MS.gene82912.t1;Parent=MS.gene82912.t1
chr6.1 exon 2382921 2383148 2382921 ID=MS.gene82912.t1.exon8;Parent=MS.gene82912.t1
chr6.1 CDS 2382921 2383148 2382921 ID=cds.MS.gene82912.t1;Parent=MS.gene82912.t1
chr6.1 exon 2383239 2383364 2383239 ID=MS.gene82912.t1.exon9;Parent=MS.gene82912.t1
chr6.1 CDS 2383239 2383364 2383239 ID=cds.MS.gene82912.t1;Parent=MS.gene82912.t1
chr6.1 exon 2384061 2384159 2384061 ID=MS.gene82912.t1.exon10;Parent=MS.gene82912.t1
chr6.1 CDS 2384061 2384159 2384061 ID=cds.MS.gene82912.t1;Parent=MS.gene82912.t1
chr6.1 exon 2384276 2384467 2384276 ID=MS.gene82912.t1.exon11;Parent=MS.gene82912.t1
chr6.1 CDS 2384276 2384467 2384276 ID=cds.MS.gene82912.t1;Parent=MS.gene82912.t1
chr6.1 exon 2385020 2385172 2385020 ID=MS.gene82912.t1.exon12;Parent=MS.gene82912.t1
chr6.1 CDS 2385020 2385172 2385020 ID=cds.MS.gene82912.t1;Parent=MS.gene82912.t1
Gene Sequence

>MS.gene82912

ATGGTGGAAATTATGTTTCAACTACCAAGTATACAGCATTTAATTTTATACCAAAGTCTTTGTTTGAACAATTCAGAAGGGTTGCAAATATCTACTTTCTTGTTGTTGCTTGTGTTTCTTTTAGTCCTTTGGCACCTTATACAGCTTTAAGTATTGCTGCACCTTTGGTGGCTGTGATTGGTGCTACTATGGCTAAAGAAGCTGTGGAAGATTGGAGAAGGAGAACTCAGGTACTGTTTCAATTTTTCTTTTCTTTAATGCCCTTAGGTCTTGTTTGGATTAGCAAATTATTTAAGTGATTATAGCATAAGTGCTTATGTATAAGCTATTTCTATAGTAAAATAATGTCAAACTGTTTTCGTATAAGCTATAAGCTGTTTTCATACGCTATGGAAAAAGTTGTTTTAAGAAGCCCTTCCAAACAATTTCACAAGTAGTAATGTCGATATAGATAAGATCAAATAAGTCAATTCAAACAGATTCTTAATTGACCCTCCTCCTAGTGCCTAGTGGTAGTTTCTGCAAAGGTTTACATTTGCATATGTCCTATAAAATTGTAGTATATACTCGATTAGTGTAATCATGCCTTTACGATTTAGTTTGTAGCTGTGGATTTGAAGTAGAAAGTTACGAGTAGGTAGTATTGCTGATGTAATTTGTTGGTACTTATGCAGTTTTCAATGTTAATTATTTTGTATGGTGGAATCAAGCTTTTATTAAGAATATCAATTATGATCTTGATGCTTCTTATGGGAATATTAGGTTGGAAACTAGGCTTAATATCTTTATTATCTTACAATGCAGAAAAGTTCAAAAATGATTCTAGGAAACTAATTAAGTGTTGCTTTATGCCGAAGCAACTTATGCATACCATTTTTATGTGCATTTTTGTTTTCTTTTTCTGTTGATGATTTGCGTTGGATATGCTTGACTTTTGTCCTGTTACGAGCTATGAAGCACGGACACTCCTCGGATTAGGCGTGTCTCCGTGTCAGACACGGCCGACATGACACCGACACTTGTAATTACACTGAATTATGTGATTTTTTTTTCAAATTATTCGTGTCGTGTCCGTGTCCGTGCTTCATAGGTTACGAGTCACAATTTTTAACCGGTATCTTTCAATCTTTAGTTCTAGACAGTTTTCTTTTTCATTGATAAATGCTTTTTTCGACCGGTTTCTTCAGGATATAGAGGCGAACAACAGAAAGGTTCAGGTATATGGTAAAAACCATACATTTGTGGAGACAAGATGGAAGAAACTTCGTGTCGGTGATGTGATTAAAGTGTACAAGGATGAATACTTTCCTTCTGATCTTCTTCTGCTTTCGTCAAGCTATGAGGACGGTGTTTGCTACGTTGAAACAATGAATCTTGATGGAGAAACTAATCTAAAACTAAAGCAAGCCTTAGAAGCGACAACTCGTCTTAGAGATGAAAAATCTCTGCAAAGGTTTAGGGCTATGGTCAAATGTGAGGATCCTAATGAAAATCTTTACTCATTTATTGGAACTTTTGAGTATGAAGGTGAAGAACATCCTCTTTCGTTGCAACAGATCCTTTTAAGAGATTCTAAGCTGAGAAATACCGAATATATATGTGGTGTTGTCATCTTTACCGGTCATGACACGAAAGTGATGCAGAATTCTGTTGATCCTCCATCAAAAAGGAGCAAAATTGAGAGAAAAATGGATAAGATAATTTACATTCTCTTTAGTACCTTGGTTTTGATATCCTTTATCGGATCTATGTTTTTCGGTGTTGATACCGAAAATGATATTAATAATGATGGAAGTTACAGAAGATGGTATCTTCATCCGGACGAAACAACCGTATATTACGATCCTAAAAGGGCAGGCCTTGCTTCGATTCTTCATTTTTTGACTGCCCTTATGTTGTATGGATATCTGATTCCAATATCACTTTATGTGTCGATAGAAATTGTGAAAGTTCTGCAGACTATTTTCATCAACCAAGATCAAGAAATGTATTATGAAGAATCAGATAGGCCGGCTCATGCGCACACATCTAATTTGAATGAAGAACTTGGTCAAGTTGATACCATATTGTCTGACAAGACCGGTACTTTGACATGCAACTCCATGGAGTTTGTCAAATGTTCAATAGGGGGTGTTCAGTATGGCCGTGGTATTACGGAAGTGGAGAAGGCACTTGCTAGGAGAGCAAAGGACAGGGAATCTGAAGGTGATGCTAATTCATCTGATTTCTTGAGTCAGAGTAGCGATGTTGTGGACTCTCAGAAGACAGTTAAGGGCTTTAACTTCAAAGATGAACGCATAATGAATGGACAATGGATTAATGAACCACATCCGGACATCATAGAGAAATTCTTTCGAGTTTTAGCTATATGTCATACAGCTATTCCTGATGTAGATAAAGCGTCCGGAGAAATTTCCTATGAAGCCGAGTCACCGGATGAAGCCGCATTTGTCATAGCTGCAAGGGAACTCGGTTTTGAGTTTTTCATTAGGACACAAACAAGCATTTCGTTGCATGAGTTGAATCATGAAAGCGGAAAAAAGGTGGACAGGTTGGCTAACTCCTTTTACCATGTTAGCATCACCAACTGATACGCTTGGTTTAGCTTAGTTTCATCGATTGGTTTTACCATGTAATTAAAAATGTTTTTAAAAATCTTTTATGTATCCATATTGTAATTTTCGGCACATGTTTACTGTTTTTGAATTTTGTATTTAATTATTTTTTGTTGACTTGTTTGATGAGCAGAGTGTACAAGCTTCTGCATGTCTTAGAGTTCAGCAGTTCGCGCAAAAGAATGTCAGTGATAGTGCGGACTGAGGAAAATAAAATATTGCTCCTATGCAAGGGTGCAGACAGGTTTGAATTTCCATCGACAATTTTTTATTGGGCTAAATATATTTTGAGTCCCTAAAGTTTTAATTCTATTAACATTTTGTTCAGTTTTCGTCCCTATATGTATTAGTCCGTAAAGAAAGAGTACTTTTAGTCCTTGGTCCAAGCATTTTCAACAATTTTTTTGTAGGGACTAAAAATATATTAAACCATTTTTTTATATAACGGAGTGGTCAAGTGTAAGTTGCACGTTGTGATTGCAAATTCTGTATTTCCATGCAGTGTGATGTTTGAAAGGCTCTCACAATACGGAAGAGAGTTTGAAGCCGAAACTAATAATCATATCAAAAGATATTCCGAGGCAGGTTTAAGAACTCTAGTAATCACGTACCGTGAAGTTGGCGAAGAAGAGTATAAGCAGTGGGACAAGGAGTTCTCAAAGGCCAAAACCTCTTTAGCAGCAGACCGAGATGCACTTGTGGATGCAGCAGCTGACAAGATGGAAAGAGATTTGATACTTCTTGGCGCTACAGCAGTTGAGGATAGACTTCAAAAAGGGGTCAGTATAAAATTTCGTTCGAGTATTTTTACTTCAGGATGATGAAATATGATCGAACGTCTAATTAAAACTTGCATTATAAATGTCAATATATAGTTATTAAACTCAGTTTATACATTGCTATAATTAAATAAAAATTCCTTACCTATATATACACATACAAAAGAACTGAAGATTCAGGCATAGATAATAACAGAAAATGTTAGAATAGCAAATCCGATTCTAAAGAAATCAAACAAATAAATTGCACAGAAGGCCACAAGTGGTTGATCACGGAGTTCAGCCAATTGTGCCTACGTCTCCGGCAACAAAGTGGCTGGTGTAGTTTTTCGATTATGAAATTGTGTTTTCAGTTACACGCACTATGCACGAGCAACTGCCTACTTAATAGCAAATATGTGTCATACTCAACAAAAAAATCCATTATTACTTAACACCACTAATTATGTGCTTGATTAGTCAATGAAGTTAGCTTTGTTTACTTAAAAATACAGGTTCCTGAATGTATCGAAAAGCTTGCTAAGGCGGGAATCAAGTTATGGGTATTGACTGGGGACAAAATGGAAACTGCAGTCAACATAGGGTACTTCAACAAGGCTTATTCTGCCTTCTATTTCTAATAAATCATGTCAAATAGAGGCTATAGCGACACTACAATGTAGCAGATTTTCAACAAATCGCTATTTTTCTGCTTTTGCGATACGCGAATTAGTACAAAGTATTAGTCCAATAGCAGCTACAGCAGCACTATAGTATTGCAGCATAGAAAAATTTGAACAAGCCTCTGTTTGTTGCGATCTGTGATTGACAACACTGGAACTTTCTCGGGAAGTTTATTAATTTGATACTAATGTTCCCCCTCCCTTTTAACAGGTATGCCTGTAGTTTACTTAGACAAGACATGAAACAGATAGTGATCACTCTCGATTCGTCTGATATCATATCAATAGAGAAACAAGGGGACAAGGAGGCTCTAATGAAGGTACACAACCTTGCGGGTTTTTGCATCCAATTTTCTCTCATTATTTTCGATCTTTGATACAATGATTGCTTAGGCCTCTCGTGAAAGCATCGAGAAGCAAATTAATGAGGGAATCTTGCAAATCAAGTCGACAAAAGAGAGTTCCAATACAGGAGAGGATAGTTCTTCATTTGGCTTGATAATTGATGGGAGGTCATTGGAGTATTCTCTCGACAACTCTATGGAAAAGTCATTCTTTAAGTTGGCTAGTAATTGTGCTTCTGTCATATGTTGCCGGTCTTCACCAAAACAGAAAGCTCGCGTAAGTATTATGGATGCGCTATTTGAAATTTTTTCATATAAATAATGGAAATTTCTTGTATATAATTACATCAGCCAAAAAAATATGCAGGTTACAAAATTGGTGAAGTTGGAAACCGGGAAGACAACTTTATCTATTGGTGATGGTGCGAATGATGTCGGTATGCTTCAGGAGGCTGATATTGGAGTTGGAATTAGTGGTGCTGAAGGGATGCAGGTCAAACATACATTTTCTTGAATTTATTTCGATTGTTCTATTTGAGTAAATAGTCGTTTAGGTCCTTGAACGTTTCACATGCTGTCACTATAGTGACATTACCTCACACATTTGAGGATCAAGATGACTACTTACTTTGTCTCTGATATTTAACGGTTTTTGAAATAGTCGTATCGTATCCCCAATGTCGATAGTAAGTTAAGAATTTGAAAATAATTTTTAACTTAACTCAATCTATCATATCCTCACACACATATGTTCTTAACTCTCGTGATCTTCTATGCGTCGTCTTCTTAATATGTAAAATTACTTAGAAATTGAAGAAAAATTTCAATTATACATAATCAACCTAGTCGTCAAACTTAGATCAGTTCAATGTCGGTTAGCATTATGTTTGTAGTTTAACAACTATATGCTGATAGTACAAACAAGTTTTACAGAAACATCGAACCATATTCCACCATCTTGATGATACATATAAATGTACATATAAAACCAGTTAAGCAAGTTTAAACTGTCGGTGTGTAGCTATTAAACTCTTATTATAAAGTATGGAATATAATTGTTTGTAGTGGTTCAGCTGATCCATCTAAATCATCAAATGTTTTGTTTCTCATTTATGTTCTTCTTTTCTTAAATAAAACCTTAACATAGCATGTATATTATTTTGAAAAAAATACTATTTGGTGTCTACAGGCTGTAATGGCAAGTGATTATTCAATCGGACAATTCCGTTTTCTGGAGCGTTTGTTGTTGGTACATGGCCATTGGTGTTATAGAAGAATATCAATGATGGTAAAATCATGCATCCAAATAACTGTGTTTGTGAATATATCCTGTATGTTATTACTTAGGAAACTTGATCCACAAGAAACTTGGTCACTGATATCTTGTTTTATTTGCTGATGCAGATATGTTACTTTTTCTATAAAAACATTGCATTTGGATTTACCCTATTTTGGTTTGAAGCATATGCTTCATTCTCCGGTCAAGCCGCTTACAACGATTGGTATATGTCATGTTACAATGTGTTCTTTACTTCGCTACCGGTAATCGCTCTAGGTGTTTTTGATCAGGATGTTTCAGCCAGACTATGCCAAAAGGTACTAAATTTTCATTCCTTAATTATTATTAAGGAACTCTTGGTAGATATGTACAATTTTTATTTCCATAAGTCAAGACCATTTAGTACTAAAAATGTCATTAAATGATGATATAGGTAAATTTTAATCAATCTGAAATTTGTTTCTCACACATTTAACTATAAACATGCACCTCCAATTGAGGGTATGTTCGGATTTTACTTGTTTGAGTTTATTTACTGACGTAAACACTTGTGATATGTCCATAAGTTGTTTTCTACTTAATTTGATAAGTTTCCTAGGATAGTTTATGAAATCAACTAATATCTTATATCAAAACAGTTTTACTTTATTTTATTTATTGTTGAAATAACATATATATAAGCCCTTACATGATATGTGCTTATAGCGTAAAGAACTTAATTCTGTTGTTTATCCAAACATGACTTAAATTTTACCATGGTGTTATGTTGCATCACACTATTATTTTATAAAACATATGCACTTGTCTACCTAAAAGATACATACGATTGAACGTCCTGTATATAACTTTTTTACATTGTCAATGTGTAGTTATTAAGTTTCGTGATTACTTGGAATCCAAGAAACCTTGTGCTAATCAAACTATCATTATATACAGCACCCGTTTCTATATCTAGAAGGCGTAGAGAACACCCTCTTCAGCTGGACTCGGATTATCGGCTGGATGTTGAACGGATTCCTTAG
Protein sequence

>MS.gene82912.t1

MVEIMFQLPTLSIAAPLVAVIGATMAKEAVEDWRRRTQDIEANNRKVQVYGKNHTFVETRWKKLRVGDVIKVYKDEYFPSDLLLLSSSYEDGVCYVETMNLDGETNLKLKQALEATTRLRDEKSLQRFRAMVKCEDPNENLYSFIGTFEYEGEEHPLSLQQILLRDSKLRNTEYICGVVIFTGHDTKVMQNSVDPPSKRSKIERKMDKIIYILFSTLVLISFIGSMFFGVDTENDINNDGSYRRWYLHPDETTVYYDPKRAGLASILHFLTALMLYGYLIPISLYVSIEIVKVLQTIFINQDQEMYYEESDRPAHAHTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIGGVQYGRGITEVEKALARRAKDRESEGDANSSDFLSQSSDVVDSQKTVKGFNFKDERIMNGQWINEPHPDIIEKFFRVLAICHTAIPDVDKASGEISYEAESPDEAAFVIAARELGFEFFIRTQTSISLHELNHESGKKVDRVYKLLHVLEFSSSRKRMSVIVRTEENKILLLCKGADSVMFERLSQYGREFEAETNNHIKRYSEAGLRTLVITYREVGEEEYKQWDKEFSKAKTSLAADRDALVDAAADKMERDLILLGATAVEDRLQKGVPECIEKLAKAGIKLWVLTGDKMETAVNIGYACSLLRQDMKQIVITLDSSDIISIEKQGDKEALMKASRESIEKQINEGILQIKSTKESSNTGEDSSSFGLIIDGRSLEYSLDNSMEKSFFKLASNCASVICCRSSPKQKARVTKLVKLETGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDYSIGQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQAAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCQKLLSFVITWNPRNLVLIKLSLYTAPVSISRRRREHPLQLDSDYRLDVERIP