AlfalfaGEDB | MS.gene79092

M. sativa cultivar XinJiangDaYe / MS.gene79092

KEGG: K09338
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043565 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00046.32 PF02183.21

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79092.t1	RHN69347.1	98.7	302	3	1	1	301	1	302	2.60E-149	538.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79092.t1	Q940J1	47.1	312	136	11	1	301	1	294	8.4e-40	165.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79092.t1	A0A396J2A4	98.7	302	3	1	1	301	1	302	1.9e-149	538.1

TFs/TRs:

Gene ID	Type	Classification
MS.gene79092.t1	TF	HB-HD-ZIP

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049159	MS.gene79092	0.810092	1.37E-50	-1.69E-46
MS.gene049647	MS.gene79092	0.81548	9.05E-52	-1.69E-46
MS.gene050376	MS.gene79092	0.803775	2.97E-49	-1.69E-46
MS.gene050719	MS.gene79092	0.822697	2.06E-53	-1.69E-46
MS.gene050721	MS.gene79092	0.819646	1.04E-52	-1.69E-46
MS.gene050724	MS.gene79092	0.818401	2.00E-52	-1.69E-46
MS.gene050762	MS.gene79092	0.800311	1.53E-48	-1.69E-46
MS.gene050807	MS.gene79092	0.828112	1.08E-54	-1.69E-46
MS.gene050959	MS.gene79092	0.82226	2.60E-53	-1.69E-46
MS.gene051180	MS.gene79092	0.807631	4.60E-50	-1.69E-46
MS.gene051719	MS.gene79092	0.803277	3.76E-49	-1.69E-46
MS.gene052323	MS.gene79092	0.810141	1.34E-50	-1.69E-46
MS.gene052665	MS.gene79092	0.852908	3.39E-61	-1.69E-46
MS.gene052896	MS.gene79092	0.81208	5.07E-51	-1.69E-46
MS.gene053166	MS.gene79092	0.802619	5.15E-49	-1.69E-46
MS.gene053221	MS.gene79092	0.81582	7.60E-52	-1.69E-46
MS.gene053226	MS.gene79092	0.801861	7.37E-49	-1.69E-46
MS.gene054379	MS.gene79092	0.807666	4.52E-50	-1.69E-46
MS.gene054467	MS.gene79092	0.815951	7.10E-52	-1.69E-46
MS.gene054468	MS.gene79092	0.847464	1.14E-59	-1.69E-46
MS.gene055358	MS.gene79092	0.808284	3.34E-50	-1.69E-46
MS.gene055466	MS.gene79092	0.8022	6.28E-49	-1.69E-46
MS.gene055512	MS.gene79092	0.842596	2.35E-58	-1.69E-46
MS.gene055816	MS.gene79092	-0.819322	1.23E-52	-1.69E-46
MS.gene05604	MS.gene79092	0.818792	1.63E-52	-1.69E-46
MS.gene056553	MS.gene79092	0.801859	7.38E-49	-1.69E-46
MS.gene057026	MS.gene79092	0.801696	7.97E-49	-1.69E-46
MS.gene058625	MS.gene79092	0.815693	8.11E-52	-1.69E-46
MS.gene058636	MS.gene79092	0.803728	3.04E-49	-1.69E-46
MS.gene058982	MS.gene79092	0.80278	4.77E-49	-1.69E-46
MS.gene059937	MS.gene79092	0.804063	2.59E-49	-1.69E-46
MS.gene060322	MS.gene79092	0.842462	2.55E-58	-1.69E-46
MS.gene060619	MS.gene79092	0.816651	4.96E-52	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79092.t1	MTR_3g086790	98.344	302	4	1	1	301	1	302	0.0	608
MS.gene79092.t1	MTR_8g089895	59.021	327	92	11	1	301	1	311	7.91e-117	339
MS.gene79092.t1	MTR_3g080100	41.638	293	132	7	1	292	1	255	5.49e-50	166
MS.gene79092.t1	MTR_3g080100	43.478	253	106	5	40	292	1	216	1.79e-47	158
MS.gene79092.t1	MTR_5g038280	57.258	124	49	1	45	164	69	192	2.85e-39	140
MS.gene79092.t1	MTR_8g469430	57.377	122	48	1	47	168	81	198	3.84e-39	139
MS.gene79092.t1	MTR_8g468210	51.656	151	60	4	25	165	33	180	8.31e-39	138
MS.gene79092.t1	MTR_5g039000	57.500	120	48	1	46	165	64	180	3.37e-37	134
MS.gene79092.t1	MTR_4g107650	59.459	111	45	0	50	160	86	196	6.91e-37	134
MS.gene79092.t1	MTR_6g007647	62.264	106	40	0	58	163	32	137	8.01e-37	132
MS.gene79092.t1	MTR_6g007647	62.264	106	40	0	58	163	66	171	1.81e-36	132
MS.gene79092.t1	MTR_6g011610	49.635	137	61	2	26	154	36	172	1.19e-35	129
MS.gene79092.t1	MTR_6g011610	61.856	97	37	0	58	154	95	191	2.49e-35	129
MS.gene79092.t1	MTR_7g010020	59.794	97	39	0	58	154	79	175	3.80e-30	115
MS.gene79092.t1	MTR_7g103340	40.571	175	90	4	35	209	41	201	6.85e-29	110
MS.gene79092.t1	MTR_1g061660	38.372	172	88	4	58	220	58	220	3.33e-26	103
MS.gene79092.t1	MTR_8g026960	36.702	188	106	5	66	241	41	227	7.49e-26	103
MS.gene79092.t1	MTR_3g092150	50.549	91	45	0	61	151	40	130	7.31e-25	100
MS.gene79092.t1	MTR_5g019650	48.182	110	57	0	51	160	45	154	1.03e-22	94.0
MS.gene79092.t1	MTR_5g019680	57.317	82	35	0	51	132	45	126	1.07e-22	93.6
MS.gene79092.t1	MTR_4g100550	41.406	128	67	2	51	178	112	231	1.71e-18	84.0
MS.gene79092.t1	MTR_1g017090	42.500	120	62	1	59	178	130	242	1.65e-17	81.3
MS.gene79092.t1	MTR_2g061030	36.879	141	78	3	56	195	197	327	4.73e-17	80.5
MS.gene79092.t1	MTR_4g097600	41.085	129	65	3	51	178	119	237	1.07e-16	78.6
MS.gene79092.t1	MTR_5g013010	40.625	128	68	2	51	178	128	247	2.16e-16	78.2
MS.gene79092.t1	MTR_1g054285	37.063	143	81	2	42	184	137	270	3.16e-16	77.8
MS.gene79092.t1	MTR_5g014890	42.718	103	52	1	51	153	115	210	7.93e-16	76.3
MS.gene79092.t1	MTR_8g006705	41.322	121	61	3	59	178	146	257	1.76e-15	75.9
MS.gene79092.t1	MTR_4g084750	41.346	104	53	2	54	156	60	156	2.52e-15	73.6
MS.gene79092.t1	MTR_7g093430	36.478	159	80	4	32	178	121	270	9.54e-15	73.6
MS.gene79092.t1	MTR_4g126900	45.055	91	43	1	62	152	91	174	1.06e-14	72.0
MS.gene79092.t1	MTR_3g103590	50.000	72	36	0	59	130	145	216	1.34e-12	67.4
MS.gene79092.t1	MTR_2g038625	37.288	118	64	3	42	156	63	173	1.91e-11	62.8
MS.gene79092.t1	MTR_2g038580	37.288	118	64	3	42	156	63	173	1.91e-11	62.8
MS.gene79092.t1	MTR_5g013010	55.000	60	27	0	51	110	128	187	4.00e-11	62.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79092.t1	AT4G40060	47.284	313	134	15	1	301	1	294	1.39e-70	220
MS.gene79092.t1	AT2G22430	45.181	332	129	14	1	301	2	311	5.63e-63	201
MS.gene79092.t1	AT5G65310	42.296	331	141	12	1	301	1	311	5.45e-62	199
MS.gene79092.t1	AT5G65310	44.097	288	117	9	38	301	26	293	1.59e-60	194
MS.gene79092.t1	AT3G01470	63.810	105	37	1	58	161	67	171	4.35e-38	136
MS.gene79092.t1	AT1G69780	55.000	120	51	1	46	165	72	188	1.78e-36	132
MS.gene79092.t1	AT5G15150	48.428	159	78	2	42	197	95	252	6.05e-36	131
MS.gene79092.t1	AT3G01220	53.982	113	50	1	44	154	70	182	1.46e-32	122
MS.gene79092.t1	AT2G46680	40.123	162	91	2	50	205	23	184	3.53e-30	115
MS.gene79092.t1	AT1G26960	44.138	145	74	2	57	201	69	206	2.53e-29	112
MS.gene79092.t1	AT2G46680	40.000	160	92	2	50	205	23	182	3.54e-29	112
MS.gene79092.t1	AT3G61890	48.936	94	48	0	62	155	33	126	4.83e-26	103
MS.gene79092.t1	AT1G27045	49.565	115	58	0	45	159	54	168	9.48e-26	102
MS.gene79092.t1	AT1G27045	49.565	115	58	0	45	159	11	125	1.66e-25	100
MS.gene79092.t1	AT1G27045	49.565	115	58	0	45	159	11	125	1.66e-25	100
MS.gene79092.t1	AT1G27045	49.565	115	58	0	45	159	3	117	1.96e-25	100
MS.gene79092.t1	AT5G03790	43.200	125	55	3	59	180	77	188	5.76e-25	100
MS.gene79092.t1	AT1G27045	49.533	107	54	0	45	151	54	160	7.30e-24	98.2
MS.gene79092.t1	AT5G03790	50.000	90	38	1	59	148	77	159	1.03e-22	93.6
MS.gene79092.t1	AT4G36740	46.789	109	51	1	52	160	49	150	2.02e-21	90.5
MS.gene79092.t1	AT4G36740	46.789	109	51	1	52	160	48	149	2.17e-21	90.5
MS.gene79092.t1	AT2G18550	44.275	131	58	3	46	173	50	168	2.64e-21	90.5
MS.gene79092.t1	AT5G66700	60.811	74	29	0	59	132	71	144	3.37e-21	90.1
MS.gene79092.t1	AT2G36610	39.535	129	61	3	38	158	52	171	1.04e-20	87.8
MS.gene79092.t1	AT5G53980	53.521	71	33	0	59	129	11	81	4.59e-17	77.4
MS.gene79092.t1	AT2G01430	38.129	139	73	5	42	179	122	248	2.11e-16	78.2
MS.gene79092.t1	AT4G16780	39.062	128	70	2	51	178	121	240	2.88e-16	77.8
MS.gene79092.t1	AT4G37790	42.718	103	52	1	51	153	118	213	6.03e-16	76.6
MS.gene79092.t1	AT2G22800	44.660	103	50	1	51	153	105	200	1.32e-15	75.9
MS.gene79092.t1	AT5G06710	35.758	165	81	5	57	221	188	327	3.75e-15	75.1
MS.gene79092.t1	AT4G17460	43.000	100	50	1	54	153	130	222	1.78e-14	72.8
MS.gene79092.t1	AT5G47370	42.718	103	52	1	51	153	122	217	2.25e-14	72.4
MS.gene79092.t1	AT2G44910	39.167	120	65	2	59	178	163	274	9.14e-14	70.9
MS.gene79092.t1	AT3G60390	38.525	122	67	2	57	178	160	273	5.59e-13	68.6
MS.gene79092.t1	AT2G01430	45.714	70	38	0	42	111	122	191	8.70e-11	60.8

Find 59 sgRNAs with CRISPR-Local

Find 82 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCCATCTTGCTCTCCTGTTT+TGG	0.182991	3.2:-74115347	None:intergenic
TCTTCACATGATAAGATTTC+TGG	0.185572	3.2:-74116362	None:intergenic
GTCATAATCCAATTGATCTT+TGG	0.265734	3.2:-74116163	None:intergenic
CCATACACATGTTTGTTCCT+TGG	0.325978	3.2:-74115111	None:intergenic
CAATTCATGGAGGAAGATTC+AGG	0.342389	3.2:-74116330	None:intergenic
GGAATTGATGTTTCTGAAGA+TGG	0.346885	3.2:-74116129	None:intergenic
AAGCAGTTGGAAAGAGATTA+TGG	0.350992	3.2:+74115375	MS.gene79092:CDS
TTCAGAATCCAAAGATCAAT+TGG	0.360161	3.2:+74116155	MS.gene79092:CDS
TAGCTGTTTGGTTCCAAAAC+AGG	0.367018	3.2:+74115334	MS.gene79092:CDS
GAGAAGCTTGCCATTGAACT+TGG	0.376848	3.2:+74115294	MS.gene79092:CDS
ATTAATGATTAACCTGTTGA+TGG	0.378350	3.2:-74114944	None:intergenic
TCCAGCGCAATTTCTTCATC+CGG	0.382294	3.2:+74116273	MS.gene79092:CDS
TGATCTTTGGATTCTGAACT+AGG	0.386464	3.2:-74116150	None:intergenic
AGTGGATCAAGTTAAGGCTT+TGG	0.405768	3.2:+74115227	MS.gene79092:CDS
AGCCTAGACAAGTAGCTGTT+TGG	0.421533	3.2:+74115322	MS.gene79092:CDS
CTGGTACTGGAAACAATTCA+TGG	0.434538	3.2:-74116343	None:intergenic
ATTAAGAGTGGATCAAGTTA+AGG	0.434553	3.2:+74115221	MS.gene79092:CDS
CCAGCGCAATTTCTTCATCC+GGG	0.438421	3.2:+74116274	MS.gene79092:CDS
GAAGGGTGTGTTGAAGAAAC+TGG	0.440606	3.2:+74115174	MS.gene79092:CDS
ATCACAATCTCTCCATCAAC+AGG	0.446409	3.2:+74114932	MS.gene79092:CDS
CATGATAAGATTTCTGGTAC+TGG	0.447688	3.2:-74116356	None:intergenic
AGACTTGAAAGACGGTTCTT+CGG	0.453631	3.2:+74116242	MS.gene79092:CDS
GAACCGTCTTTCAAGTCTAC+TGG	0.456218	3.2:-74116237	None:intergenic
TTGGATGGATTTGAAGAAGA+AGG	0.464593	3.2:+74115156	MS.gene79092:CDS
TTTCAATCAATGATGTTGGA+TGG	0.484310	3.2:+74115141	MS.gene79092:CDS
TGAAGAAGAATCTGAGGTGT+TGG	0.489416	3.2:-74114900	None:intergenic
CCAAGGAACAAACATGTGTA+TGG	0.493903	3.2:+74115111	MS.gene79092:CDS
GGTCAGGACAGTACCATTGT+AGG	0.494776	3.2:-74116452	None:intergenic
AACAACAATGATGTTGGTAT+TGG	0.500792	3.2:+74116195	MS.gene79092:CDS
GAACAAACATGTGTATGGTA+TGG	0.501372	3.2:+74115116	MS.gene79092:CDS
AGGAGTTGAAGAAGAATCTG+AGG	0.515030	3.2:-74114906	None:intergenic
GGAGTTTCAATCAATGATGT+TGG	0.518927	3.2:+74115137	MS.gene79092:CDS
GAAGAAGAATCTGAGGTGTT+GGG	0.524763	3.2:-74114899	None:intergenic
GAATTGATGTTTCTGAAGAT+GGG	0.525493	3.2:-74116128	None:intergenic
GAAATCTTATCATGTGAAGA+TGG	0.526190	3.2:+74116365	MS.gene79092:CDS
AGGCTGCAACCCAAGTTCAA+TGG	0.529892	3.2:-74115304	None:intergenic
CCCGGATGAAGAAATTGCGC+TGG	0.538230	3.2:-74116274	None:intergenic
AAGATTCAGGAGACAACAAA+AGG	0.555354	3.2:-74116317	None:intergenic
AGAAGCTTGCCATTGAACTT+GGG	0.559661	3.2:+74115295	MS.gene79092:CDS
ATAATCAACAACAATGATGT+TGG	0.562748	3.2:+74116189	MS.gene79092:CDS
CAGCGCAATTTCTTCATCCG+GGG	0.572338	3.2:+74116275	MS.gene79092:CDS
GGACAGTACCATTGTAGGGT+TGG	0.574109	3.2:-74116447	None:intergenic
TCCAAAACAGGAGAGCAAGA+TGG	0.577020	3.2:+74115346	MS.gene79092:CDS
GTCAGGACAGTACCATTGTA+GGG	0.584883	3.2:-74116451	None:intergenic
GAAGAAACGTAGATTAAGAG+TGG	0.588824	3.2:+74115209	MS.gene79092:CDS
AACCAAACAGCTACTTGTCT+AGG	0.590010	3.2:-74115324	None:intergenic
CAATTTCTTAAGTGCCGATG+AGG	0.590118	3.2:+74116395	MS.gene79092:CDS
TGGATGGATTTGAAGAAGAA+GGG	0.596251	3.2:+74115157	MS.gene79092:CDS
TTTCCAGTAGACTTGAAAGA+CGG	0.606889	3.2:+74116234	MS.gene79092:CDS
AAGATGGAAGACTAAGCAGT+TGG	0.608505	3.2:+74115362	MS.gene79092:CDS
AAGGAATTGAAATCAAAGCT+CGG	0.611949	3.2:+74116024	MS.gene79092:CDS
ATTTAGAGGAACATAGTCCA+AGG	0.623460	3.2:+74115094	MS.gene79092:intron
TTCATCACAAGATTCAAGCA+TGG	0.624852	3.2:-74116094	None:intergenic
AATGGTACTGTCCTGACCAG+TGG	0.629087	3.2:+74116457	MS.gene79092:CDS
CTGCTGACTCTGAAGAACCC+CGG	0.637223	3.2:-74116292	None:intergenic
AGCAAGCACCAACCCTACAA+TGG	0.659727	3.2:+74116439	MS.gene79092:CDS
ATCTTATCATGTGAAGATGG+AGG	0.661383	3.2:+74116368	MS.gene79092:CDS
GATGGAGAGATTGTGATGAG+AGG	0.700166	3.2:-74114926	None:intergenic
GTACTGGAAACAATTCATGG+AGG	0.765506	3.2:-74116340	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTTTTTCTTTCTATTTT+TGG	+	chr3.2:74114992-74115011	MS.gene79092:intron	10.0%
!!	AACGTAAAAGTAAAAAAACA+TGG	-	chr3.2:74115024-74115043	None:intergenic	20.0%
!!!	ATGTTTTTTTACTTTTACGT+TGG	+	chr3.2:74115023-74115042	MS.gene79092:intron	20.0%
!!!	TTTGTTGTATTTACAGATTA+AGG	+	chr3.2:74116005-74116024	MS.gene79092:intron	20.0%
!!!	TTTTTCTTTCTATTTTTGGA+GGG	+	chr3.2:74114996-74115015	MS.gene79092:intron	20.0%
!!!	TTTTTTCTTTCTATTTTTGG+AGG	+	chr3.2:74114995-74115014	MS.gene79092:intron	20.0%
!	ATAATCAACAACAATGATGT+TGG	+	chr3.2:74116189-74116208	MS.gene79092:CDS	25.0%
!	ATTAATGATTAACCTGTTGA+TGG	-	chr3.2:74114947-74114966	None:intergenic	25.0%
!	GATCTTAGTTATGAAATTGT+AGG	+	chr3.2:74115884-74115903	MS.gene79092:intron	25.0%
!	TATTTAGTGTATGTTTGGAT+TGG	+	chr3.2:74115794-74115813	MS.gene79092:intron	25.0%
!	TGAATTTAGCAAAATCACTT+TGG	+	chr3.2:74115820-74115839	MS.gene79092:intron	25.0%
!	TTATAGTTAAGTTACTACTG+TGG	-	chr3.2:74115497-74115516	None:intergenic	25.0%
!!!	AAAAAGCACAATCAATGTTT+TGG	+	chr3.2:74116056-74116075	MS.gene79092:CDS	25.0%
!!!	CTTTTTTTGCATTGATTTAG+AGG	+	chr3.2:74115080-74115099	MS.gene79092:intron	25.0%
!!!	TGTGTTATTTAGTGTATGTT+TGG	+	chr3.2:74115789-74115808	MS.gene79092:intron	25.0%
	AACAACAATGATGTTGGTAT+TGG	+	chr3.2:74116195-74116214	MS.gene79092:CDS	30.0%
	AAGGAATTGAAATCAAAGCT+CGG	+	chr3.2:74116024-74116043	MS.gene79092:CDS	30.0%
	ATTAAGAGTGGATCAAGTTA+AGG	+	chr3.2:74115221-74115240	MS.gene79092:CDS	30.0%
	GAAATCTTATCATGTGAAGA+TGG	+	chr3.2:74116365-74116384	MS.gene79092:CDS	30.0%
	GTCATAATCCAATTGATCTT+TGG	-	chr3.2:74116166-74116185	None:intergenic	30.0%
	TCTTCACATGATAAGATTTC+TGG	-	chr3.2:74116365-74116384	None:intergenic	30.0%
	TTCAGAATCCAAAGATCAAT+TGG	+	chr3.2:74116155-74116174	MS.gene79092:CDS	30.0%
	TTTCAATCAATGATGTTGGA+TGG	+	chr3.2:74115141-74115160	MS.gene79092:CDS	30.0%
!	GAATTGATGTTTCTGAAGAT+GGG	-	chr3.2:74116131-74116150	None:intergenic	30.0%
!!	GGCAAGTATTTAACTTTTCT+AGG	+	chr3.2:74115905-74115924	MS.gene79092:intron	30.0%
	AAGATTCAGGAGACAACAAA+AGG	-	chr3.2:74116320-74116339	None:intergenic	35.0%
	AAGCAGTTGGAAAGAGATTA+TGG	+	chr3.2:74115375-74115394	MS.gene79092:CDS	35.0%
	AGATCAAGTACTTTCACAAG+AGG	-	chr3.2:74115869-74115888	None:intergenic	35.0%
	ATCTTATCATGTGAAGATGG+AGG	+	chr3.2:74116368-74116387	MS.gene79092:CDS	35.0%
	ATTTAGAGGAACATAGTCCA+AGG	+	chr3.2:74115094-74115113	MS.gene79092:intron	35.0%
	GAACAAACATGTGTATGGTA+TGG	+	chr3.2:74115116-74115135	MS.gene79092:CDS	35.0%
	GAAGAAACGTAGATTAAGAG+TGG	+	chr3.2:74115209-74115228	MS.gene79092:CDS	35.0%
	GGAGTTTCAATCAATGATGT+TGG	+	chr3.2:74115137-74115156	MS.gene79092:CDS	35.0%
	TGATCTTTGGATTCTGAACT+AGG	-	chr3.2:74116153-74116172	None:intergenic	35.0%
	TTCATCACAAGATTCAAGCA+TGG	-	chr3.2:74116097-74116116	None:intergenic	35.0%
	TTTCCAGTAGACTTGAAAGA+CGG	+	chr3.2:74116234-74116253	MS.gene79092:CDS	35.0%
!	AGACAACAAAGCTTTTCACA+AGG	+	chr3.2:74115452-74115471	MS.gene79092:CDS	35.0%
!	GGAATTGATGTTTCTGAAGA+TGG	-	chr3.2:74116132-74116151	None:intergenic	35.0%
!	TGGATGGATTTGAAGAAGAA+GGG	+	chr3.2:74115157-74115176	MS.gene79092:CDS	35.0%
!	TTGGATGGATTTGAAGAAGA+AGG	+	chr3.2:74115156-74115175	MS.gene79092:CDS	35.0%
!!	CATGATAAGATTTCTGGTAC+TGG	-	chr3.2:74116359-74116378	None:intergenic	35.0%
!!!	AATCAATGTTTTGGTGAAGG+AGG	+	chr3.2:74116065-74116084	MS.gene79092:CDS	35.0%
!!!	CACAATCAATGTTTTGGTGA+AGG	+	chr3.2:74116062-74116081	MS.gene79092:CDS	35.0%
	AACCAAACAGCTACTTGTCT+AGG	-	chr3.2:74115327-74115346	None:intergenic	40.0%
	AAGATGGAAGACTAAGCAGT+TGG	+	chr3.2:74115362-74115381	MS.gene79092:CDS	40.0%
	AGAAGCTTGCCATTGAACTT+GGG	+	chr3.2:74115295-74115314	MS.gene79092:CDS	40.0%
	AGACTTGAAAGACGGTTCTT+CGG	+	chr3.2:74116242-74116261	MS.gene79092:CDS	40.0%
	AGGAGTTGAAGAAGAATCTG+AGG	-	chr3.2:74114909-74114928	None:intergenic	40.0%
	AGTGGATCAAGTTAAGGCTT+TGG	+	chr3.2:74115227-74115246	MS.gene79092:CDS	40.0%
	ATCACAATCTCTCCATCAAC+AGG	+	chr3.2:74114932-74114951	MS.gene79092:CDS	40.0%
	CAATTCATGGAGGAAGATTC+AGG	-	chr3.2:74116333-74116352	None:intergenic	40.0%
	CCAAGGAACAAACATGTGTA+TGG	+	chr3.2:74115111-74115130	MS.gene79092:CDS	40.0%
	CCATACACATGTTTGTTCCT+TGG	-	chr3.2:74115114-74115133	None:intergenic	40.0%
	GTACTGGAAACAATTCATGG+AGG	-	chr3.2:74116343-74116362	None:intergenic	40.0%
!	CAACAAAGCTTTTCACAAGG+AGG	+	chr3.2:74115455-74115474	MS.gene79092:CDS	40.0%
!	CTGGTACTGGAAACAATTCA+TGG	-	chr3.2:74116346-74116365	None:intergenic	40.0%
!	GAAGAAGAATCTGAGGTGTT+GGG	-	chr3.2:74114902-74114921	None:intergenic	40.0%
!	GCAAGCTTCTCTTTTCTTTC+AGG	-	chr3.2:74115285-74115304	None:intergenic	40.0%
!	TAGCTGTTTGGTTCCAAAAC+AGG	+	chr3.2:74115334-74115353	MS.gene79092:CDS	40.0%
!	TGAAGAAGAATCTGAGGTGT+TGG	-	chr3.2:74114903-74114922	None:intergenic	40.0%
!!	CAATTTCTTAAGTGCCGATG+AGG	+	chr3.2:74116395-74116414	MS.gene79092:CDS	40.0%
!!	GGCTTTGGAGAAAAACTTTG+AGG	+	chr3.2:74115242-74115261	MS.gene79092:CDS	40.0%
	AGCCTAGACAAGTAGCTGTT+TGG	+	chr3.2:74115322-74115341	MS.gene79092:CDS	45.0%
	GAAAAAGTTGCACGCCTCAT+CGG	-	chr3.2:74116412-74116431	None:intergenic	45.0%
	GAGAAGCTTGCCATTGAACT+TGG	+	chr3.2:74115294-74115313	MS.gene79092:CDS	45.0%
	GATGGAGAGATTGTGATGAG+AGG	-	chr3.2:74114929-74114948	None:intergenic	45.0%
	GTCAGGACAGTACCATTGTA+GGG	-	chr3.2:74116454-74116473	None:intergenic	45.0%
	TCCAAAACAGGAGAGCAAGA+TGG	+	chr3.2:74115346-74115365	MS.gene79092:CDS	45.0%
	TCCAGCGCAATTTCTTCATC+CGG	+	chr3.2:74116273-74116292	MS.gene79092:CDS	45.0%
!	GAACCGTCTTTCAAGTCTAC+TGG	-	chr3.2:74116240-74116259	None:intergenic	45.0%
!	GAAGGGTGTGTTGAAGAAAC+TGG	+	chr3.2:74115174-74115193	MS.gene79092:CDS	45.0%
!	TCCATCTTGCTCTCCTGTTT+TGG	-	chr3.2:74115350-74115369	None:intergenic	45.0%
!!	TGAGGCGTGCAACTTTTTCT+CGG	+	chr3.2:74116413-74116432	MS.gene79092:CDS	45.0%
	AATGGTACTGTCCTGACCAG+TGG	+	chr3.2:74116457-74116476	MS.gene79092:CDS	50.0%
	AGCAAGCACCAACCCTACAA+TGG	+	chr3.2:74116439-74116458	MS.gene79092:CDS	50.0%
	AGGCTGCAACCCAAGTTCAA+TGG	-	chr3.2:74115307-74115326	None:intergenic	50.0%
	CAGCGCAATTTCTTCATCCG+GGG	+	chr3.2:74116275-74116294	MS.gene79092:CDS	50.0%
	CCAGCGCAATTTCTTCATCC+GGG	+	chr3.2:74116274-74116293	MS.gene79092:CDS	50.0%
	GGACAGTACCATTGTAGGGT+TGG	-	chr3.2:74116450-74116469	None:intergenic	50.0%
	GGTCAGGACAGTACCATTGT+AGG	-	chr3.2:74116455-74116474	None:intergenic	50.0%
	CCCGGATGAAGAAATTGCGC+TGG	-	chr3.2:74116277-74116296	None:intergenic	55.0%
!!	CTGCTGACTCTGAAGAACCC+CGG	-	chr3.2:74116295-74116314	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.2	gene	74114890	74116485	74114890	ID=MS.gene79092
chr3.2	mRNA	74114890	74116485	74114890	ID=MS.gene79092.t1;Parent=MS.gene79092
chr3.2	exon	74114890	74114953	74114890	ID=MS.gene79092.t1.exon1;Parent=MS.gene79092.t1
chr3.2	CDS	74114890	74114953	74114890	ID=cds.MS.gene79092.t1;Parent=MS.gene79092.t1
chr3.2	exon	74115100	74115476	74115100	ID=MS.gene79092.t1.exon2;Parent=MS.gene79092.t1
chr3.2	CDS	74115100	74115476	74115100	ID=cds.MS.gene79092.t1;Parent=MS.gene79092.t1
chr3.2	exon	74116021	74116485	74116021	ID=MS.gene79092.t1.exon3;Parent=MS.gene79092.t1
chr3.2	CDS	74116021	74116485	74116021	ID=cds.MS.gene79092.t1;Parent=MS.gene79092.t1

Gene Sequence

>MS.gene79092

ATGAAGAGACCCAACACCTCAGATTCTTCTTCAACTCCTCTCATCACAATCTCTCCATCAACAGGTTAATCATTAATTTCAGACATAGATCTATGTTTGTGTTTTTTTTTTCTTTCTATTTTTGGAGGGTACCATGTTTTTTTACTTTTACGTTGGTTATAGTAATTATGTTACTATTACTTATAGTTTTCTTTTTTTGCATTGATTTAGAGGAACATAGTCCAAGGAACAAACATGTGTATGGTATGGAGTTTCAATCAATGATGTTGGATGGATTTGAAGAAGAAGGGTGTGTTGAAGAAACTGGTCATCATTCTGAGAAGAAACGTAGATTAAGAGTGGATCAAGTTAAGGCTTTGGAGAAAAACTTTGAGGTAGAAAACAAGCTTGAACCTGAAAGAAAAGAGAAGCTTGCCATTGAACTTGGGTTGCAGCCTAGACAAGTAGCTGTTTGGTTCCAAAACAGGAGAGCAAGATGGAAGACTAAGCAGTTGGAAAGAGATTATGGTGTTCTTAAAGCTAATTATGATGCTCTTAAGCTCAAGTTTGATGCAATTGCTCAAGACAACAAAGCTTTTCACAAGGAGGTATAAACATCTATAATCCACAGTAGTAACTTAACTATAATTTAGTTTCTGAAGTTATAAGTGCAATAACAACTTAATTAAGTGTTTATAGCATAATCACTTATCATTTAAGTACTTTCGAATAAGCTACTTCATAATATAAGATAGAATAAAGTCACTAGTCAAACTATTTTCATGTAAGTTATTAGTTGTTTTCATAAACTATTCTAAAGCGCTTGTGAAAATAAGCTAAAAACAACTTATTTATAAGTTGTTTCTATAAAAAACAACTTATTTGATACGAGTATATCAATTCACAGATTTTTAAGCTGTTGTGTTATTTAGTGTATGTTTGGATTGGCAGTGAATTTAGCAAAATCACTTTGGCACTTGAATTTGTAAAGCTATGTCCTCTTGTGAAAGTACTTGATCTTAGTTATGAAATTGTAGGCAAGTATTTAACTTTTCTAGGAACAAATGTATCATAAATTTGAAGTTATTATTGAAAGTGTGTGATTAATTTTCTCTCAAAAACAGAAAGTTGATTGATTTGTTGTATTTACAGATTAAGGAATTGAAATCAAAGCTCGGAGAAGAAGAAAAAAGCACAATCAATGTTTTGGTGAAGGAGGAGTTAACCATGCTTGAATCTTGTGATGAAGACAAGCATAACCCATCTTCAGAAACATCAATTCCTAGTTCAGAATCCAAAGATCAATTGGATTATGACTGCATAATCAACAACAATGATGTTGGTATTGGTGAAACTTCTTCACTCTTTCCAGTAGACTTGAAAGACGGTTCTTCGGACAGCGACTCCAGCGCAATTTCTTCATCCGGGGTTCTTCAGAGTCAGCAGCACCTTTTGTTGTCTCCTGAATCTTCCTCCATGAATTGTTTCCAGTACCAGAAATCTTATCATGTGAAGATGGAGGAGCACAATTTCTTAAGTGCCGATGAGGCGTGCAACTTTTTCTCGGACGAGCAAGCACCAACCCTACAATGGTACTGTCCTGACCAGTGGAGTTAA

Protein sequence

>MS.gene79092.t1

MKRPNTSDSSSTPLITISPSTEEHSPRNKHVYGMEFQSMMLDGFEEEGCVEETGHHSEKKRRLRVDQVKALEKNFEVENKLEPERKEKLAIELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLKFDAIAQDNKAFHKEIKELKSKLGEEEKSTINVLVKEELTMLESCDEDKHNPSSETSIPSSESKDQLDYDCIINNNDVGIGETSSLFPVDLKDGSSDSDSSAISSSGVLQSQQHLLLSPESSSMNCFQYQKSYHVKMEEHNFLSADEACNFFSDEQAPTLQWYCPDQWS