Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79784.t1 | XP_003619829.1 | 97.4 | 583 | 11 | 2 | 1 | 579 | 1 | 583 | 2.40E-308 | 1067.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79784.t1 | Q5SMQ9 | 70.0 | 597 | 136 | 10 | 1 | 578 | 1 | 573 | 5.7e-218 | 758.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79784.t1 | Q8GV74 | 97.4 | 583 | 11 | 2 | 1 | 579 | 1 | 583 | 1.7e-308 | 1067.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene79784 | 0.843797 | 1.12E-58 | -1.69E-46 |
| MS.gene049697 | MS.gene79784 | 0.80091 | 1.15E-48 | -1.69E-46 |
| MS.gene050297 | MS.gene79784 | 0.807537 | 4.82E-50 | -1.69E-46 |
| MS.gene050310 | MS.gene79784 | 0.835651 | 1.48E-56 | -1.69E-46 |
| MS.gene051067 | MS.gene79784 | 0.827528 | 1.49E-54 | -1.69E-46 |
| MS.gene051263 | MS.gene79784 | 0.813262 | 2.80E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene79784 | 0.812832 | 3.48E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene79784 | 0.830579 | 2.71E-55 | -1.69E-46 |
| MS.gene052150 | MS.gene79784 | 0.812717 | 3.68E-51 | -1.69E-46 |
| MS.gene052151 | MS.gene79784 | 0.835196 | 1.93E-56 | -1.69E-46 |
| MS.gene053536 | MS.gene79784 | 0.846366 | 2.27E-59 | -1.69E-46 |
| MS.gene053538 | MS.gene79784 | 0.842462 | 2.55E-58 | -1.69E-46 |
| MS.gene056169 | MS.gene79784 | 0.807786 | 4.26E-50 | -1.69E-46 |
| MS.gene056228 | MS.gene79784 | 0.805753 | 1.15E-49 | -1.69E-46 |
| MS.gene056870 | MS.gene79784 | 0.800663 | 1.30E-48 | -1.69E-46 |
| MS.gene057004 | MS.gene79784 | 0.801559 | 8.51E-49 | -1.69E-46 |
| MS.gene057082 | MS.gene79784 | 0.809414 | 1.91E-50 | -1.69E-46 |
| MS.gene058197 | MS.gene79784 | 0.800548 | 1.37E-48 | -1.69E-46 |
| MS.gene058823 | MS.gene79784 | 0.821108 | 4.81E-53 | -1.69E-46 |
| MS.gene05894 | MS.gene79784 | 0.86359 | 2.23E-64 | -1.69E-46 |
| MS.gene059300 | MS.gene79784 | 0.833137 | 6.34E-56 | -1.69E-46 |
| MS.gene059424 | MS.gene79784 | 0.846359 | 2.28E-59 | -1.69E-46 |
| MS.gene06057 | MS.gene79784 | 0.806916 | 6.52E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene83125 | MS.gene79784 | PPI |
| MS.gene79784 | MS.gene62984 | PPI |
| MS.gene79784 | MS.gene59137 | PPI |
| MS.gene79784 | MS.gene026602 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79784.t1 | MTR_6g069510 | 98.628 | 583 | 4 | 2 | 1 | 579 | 1 | 583 | 0.0 | 1178 |
| MS.gene79784.t1 | MTR_8g107360 | 72.117 | 581 | 82 | 10 | 1 | 579 | 1 | 503 | 0.0 | 792 |
| MS.gene79784.t1 | MTR_7g089360 | 66.667 | 612 | 129 | 14 | 1 | 579 | 1 | 570 | 0.0 | 765 |
| MS.gene79784.t1 | MTR_7g089360 | 66.667 | 612 | 129 | 14 | 1 | 579 | 1 | 570 | 0.0 | 765 |
| MS.gene79784.t1 | MTR_4g084870 | 62.154 | 650 | 163 | 15 | 1 | 579 | 1 | 638 | 0.0 | 744 |
| MS.gene79784.t1 | MTR_1g030890 | 62.338 | 616 | 179 | 10 | 1 | 579 | 1 | 600 | 0.0 | 716 |
| MS.gene79784.t1 | MTR_4g127100 | 59.350 | 615 | 203 | 10 | 1 | 579 | 1 | 604 | 0.0 | 684 |
| MS.gene79784.t1 | MTR_4g127090 | 54.925 | 599 | 197 | 9 | 1 | 579 | 1 | 546 | 0.0 | 602 |
| MS.gene79784.t1 | MTR_1g030890 | 59.108 | 538 | 167 | 10 | 1 | 501 | 1 | 522 | 0.0 | 577 |
| MS.gene79784.t1 | MTR_4g127100 | 56.401 | 539 | 188 | 10 | 1 | 503 | 1 | 528 | 0.0 | 552 |
| MS.gene79784.t1 | MTR_1g029190 | 48.123 | 586 | 217 | 11 | 1 | 579 | 1 | 506 | 7.84e-161 | 470 |
| MS.gene79784.t1 | MTR_2g038470 | 42.078 | 587 | 233 | 13 | 1 | 579 | 1 | 488 | 1.40e-142 | 422 |
| MS.gene79784.t1 | MTR_7g009370 | 57.407 | 162 | 69 | 0 | 1 | 162 | 1 | 162 | 1.91e-55 | 191 |
| MS.gene79784.t1 | MTR_7g009370 | 58.084 | 167 | 59 | 2 | 413 | 579 | 181 | 336 | 2.82e-53 | 186 |
| MS.gene79784.t1 | MTR_6g011400 | 57.595 | 158 | 66 | 1 | 1 | 157 | 1 | 158 | 3.94e-54 | 188 |
| MS.gene79784.t1 | MTR_6g011400 | 48.947 | 190 | 88 | 1 | 399 | 579 | 151 | 340 | 2.02e-51 | 181 |
| MS.gene79784.t1 | MTR_7g079720 | 52.903 | 155 | 73 | 0 | 1 | 155 | 1 | 155 | 4.98e-49 | 174 |
| MS.gene79784.t1 | MTR_7g079720 | 42.408 | 191 | 101 | 2 | 389 | 579 | 159 | 340 | 9.81e-44 | 160 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79784.t1 | AT1G73590 | 70.827 | 617 | 126 | 12 | 1 | 579 | 1 | 601 | 0.0 | 828 |
| MS.gene79784.t1 | AT1G23080 | 63.531 | 606 | 182 | 12 | 1 | 579 | 1 | 594 | 0.0 | 707 |
| MS.gene79784.t1 | AT1G23080 | 63.531 | 606 | 182 | 12 | 1 | 579 | 1 | 594 | 0.0 | 707 |
| MS.gene79784.t1 | AT1G23080 | 63.115 | 610 | 182 | 12 | 1 | 579 | 1 | 598 | 0.0 | 707 |
| MS.gene79784.t1 | AT2G01420 | 61.702 | 611 | 182 | 11 | 1 | 579 | 1 | 591 | 0.0 | 706 |
| MS.gene79784.t1 | AT2G01420 | 61.129 | 620 | 175 | 13 | 1 | 579 | 1 | 595 | 0.0 | 704 |
| MS.gene79784.t1 | AT1G70940 | 61.137 | 633 | 178 | 15 | 1 | 579 | 1 | 619 | 0.0 | 699 |
| MS.gene79784.t1 | AT5G57090 | 58.242 | 637 | 197 | 11 | 1 | 579 | 1 | 626 | 0.0 | 682 |
| MS.gene79784.t1 | AT1G23080 | 61.174 | 528 | 166 | 12 | 1 | 501 | 1 | 516 | 0.0 | 593 |
| MS.gene79784.t1 | AT2G01420 | 58.672 | 542 | 158 | 13 | 1 | 501 | 1 | 517 | 0.0 | 577 |
| MS.gene79784.t1 | AT5G57090 | 55.514 | 535 | 169 | 11 | 102 | 578 | 2 | 525 | 0.0 | 521 |
| MS.gene79784.t1 | AT1G77110 | 49.138 | 580 | 261 | 12 | 1 | 578 | 1 | 548 | 1.41e-172 | 501 |
| MS.gene79784.t1 | AT1G77110 | 49.138 | 580 | 261 | 12 | 1 | 578 | 1 | 548 | 1.43e-172 | 501 |
| MS.gene79784.t1 | AT5G16530 | 54.777 | 157 | 71 | 0 | 1 | 157 | 1 | 157 | 5.13e-53 | 184 |
| MS.gene79784.t1 | AT5G16530 | 51.493 | 134 | 65 | 0 | 446 | 579 | 195 | 328 | 7.90e-42 | 154 |
| MS.gene79784.t1 | AT5G16530 | 54.777 | 157 | 71 | 0 | 1 | 157 | 1 | 157 | 2.13e-52 | 183 |
| MS.gene79784.t1 | AT5G16530 | 51.493 | 134 | 65 | 0 | 446 | 579 | 195 | 328 | 2.47e-41 | 153 |
| MS.gene79784.t1 | AT5G15100 | 60.839 | 143 | 56 | 0 | 437 | 579 | 204 | 346 | 1.37e-51 | 181 |
| MS.gene79784.t1 | AT5G15100 | 49.091 | 165 | 79 | 1 | 1 | 160 | 1 | 165 | 5.21e-44 | 160 |
Find 103 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGGAATTCCTTTACTTAA+AGG | 0.161203 | 6.2:+72648148 | MS.gene79784:CDS |
| GACAAGGCTTATATTGATTA+TGG | 0.209942 | 6.2:+72649474 | MS.gene79784:CDS |
| AACACTTACTCTAGCTTAAT+TGG | 0.219273 | 6.2:+72649523 | MS.gene79784:CDS |
| TCTTATTTCTTCTTGCTATA+TGG | 0.220059 | 6.2:+72648047 | MS.gene79784:CDS |
| CTTGGTCTTTGGTTTCATTC+AGG | 0.226095 | 6.2:+72649551 | MS.gene79784:CDS |
| AATTGGTCTCACTTGGTCTT+TGG | 0.247229 | 6.2:+72649540 | MS.gene79784:CDS |
| CTTCCAAACACTTTGGTTAT+GGG | 0.260587 | 6.2:+72648130 | MS.gene79784:CDS |
| ACTTCCAAACACTTTGGTTA+TGG | 0.265129 | 6.2:+72648129 | MS.gene79784:CDS |
| CTTTCATGTTGCCATTGTTC+AGG | 0.267914 | 6.2:+72651238 | MS.gene79784:CDS |
| AGACACTCAAGAGGACTATT+TGG | 0.274169 | 6.2:+72649336 | MS.gene79784:CDS |
| CACCCTGTGCTTAGAATATC+AGG | 0.290049 | 6.2:-72652340 | None:intergenic |
| GTAGCTATGATCTTAGCTTA+TGG | 0.302571 | 6.2:+72647857 | MS.gene79784:CDS |
| CCATTCTAAACAACCCCTTT+TGG | 0.316887 | 6.2:-72648080 | None:intergenic |
| AATGATGTTGTTAATAACTA+TGG | 0.326058 | 6.2:+72648625 | MS.gene79784:CDS |
| TTTGTAGGAGAAAACATTCC+TGG | 0.335718 | 6.2:-72648748 | None:intergenic |
| AAGATCTTCATATGTTTGTT+TGG | 0.346836 | 6.2:+72648848 | MS.gene79784:CDS |
| ATTAAGCTAGAGTAAGTGTT+TGG | 0.363628 | 6.2:-72649520 | None:intergenic |
| TAGCTTATGGATCAGTAAAA+TGG | 0.367227 | 6.2:+72647870 | MS.gene79784:CDS |
| CCAAAAGGGGTTGTTTAGAA+TGG | 0.369590 | 6.2:+72648080 | MS.gene79784:CDS |
| GGAAATAGACTTTGCTATAA+TGG | 0.370605 | 6.2:-72650024 | None:intergenic |
| ATTCCCATAACCAAAGTGTT+TGG | 0.375667 | 6.2:-72648133 | None:intergenic |
| TCTTCATAATTAGAAGGTCT+TGG | 0.376111 | 6.2:-72648676 | None:intergenic |
| GGCTTATATTGATTATGGTT+TGG | 0.376793 | 6.2:+72649479 | MS.gene79784:CDS |
| CCTTTACTTAAAGGAATGTA+TGG | 0.377284 | 6.2:+72648157 | MS.gene79784:CDS |
| GAGAAAGATGAATTCAGCTT+TGG | 0.386961 | 6.2:+72649358 | MS.gene79784:CDS |
| TCAGCATTAGTAAGATTAGA+AGG | 0.389801 | 6.2:-72648493 | None:intergenic |
| GCTTCTTCTTCATAATTAGA+AGG | 0.394539 | 6.2:-72648682 | None:intergenic |
| AAGTCCTGCATCTGACAGTA+TGG | 0.396661 | 6.2:-72650045 | None:intergenic |
| TTAGTAAGATTAGAAGGTCT+TGG | 0.397425 | 6.2:-72648487 | None:intergenic |
| GGAGAAAACATTCCTGGATT+AGG | 0.399766 | 6.2:-72648742 | None:intergenic |
| TTGTTCTTCAATGTATCATT+TGG | 0.400452 | 6.2:+72648212 | MS.gene79784:CDS |
| TCACCTGTCTCTGATGTGTT+TGG | 0.400913 | 6.2:+72648883 | MS.gene79784:CDS |
| GCAGCTGCTTCATTTGCTGT+TGG | 0.404122 | 6.2:+72651200 | MS.gene79784:CDS |
| TATTCCTTAGCAAAGACAAA+TGG | 0.416542 | 6.2:-72652307 | None:intergenic |
| ATGGAGCAATTTCTCCAAAA+GGG | 0.423793 | 6.2:+72648066 | MS.gene79784:CDS |
| CTAGCTTAATTGGTCTCACT+TGG | 0.425011 | 6.2:+72649533 | MS.gene79784:CDS |
| ATCCTTACAAAATGAACCTT+AGG | 0.436200 | 6.2:+72647990 | MS.gene79784:CDS |
| CCTTGTTGGTCCAGCTGTCA+TGG | 0.441793 | 6.2:+72651178 | MS.gene79784:CDS |
| TCATTTGCTGTTGGACTCAA+AGG | 0.446394 | 6.2:+72651209 | MS.gene79784:CDS |
| GAACAGTTTCCTGACACTGC+TGG | 0.447998 | 6.2:+72648289 | MS.gene79784:CDS |
| CCATACATTCCTTTAAGTAA+AGG | 0.457088 | 6.2:-72648157 | None:intergenic |
| GATTGTTTGATGCTATGAAA+TGG | 0.458601 | 6.2:-72647970 | None:intergenic |
| ATGGGTGTGAGATTCCTTGT+TGG | 0.466818 | 6.2:+72651164 | MS.gene79784:CDS |
| CTCAACACTTCCAAACACTT+TGG | 0.468618 | 6.2:+72648123 | MS.gene79784:CDS |
| TATGGAGCAATTTCTCCAAA+AGG | 0.468730 | 6.2:+72648065 | MS.gene79784:CDS |
| TGATTCTGATGTCATGTCAT+TGG | 0.471853 | 6.2:+72648333 | MS.gene79784:CDS |
| CCTGTCTCTGATGTGTTTGG+TGG | 0.474026 | 6.2:+72648886 | MS.gene79784:CDS |
| TTGATTCCTGAACATTGATC+AGG | 0.476336 | 6.2:-72647908 | None:intergenic |
| GAATTCAGCTTTGGTAATAG+AGG | 0.484834 | 6.2:+72649367 | MS.gene79784:CDS |
| GAAGCAGCTGCCATGACAGC+TGG | 0.484986 | 6.2:-72651188 | None:intergenic |
| AAACTAGAACCTCTAGGAGT+AGG | 0.485948 | 6.2:-72648544 | None:intergenic |
| GGTGGAAGAAACTCAAACTT+TGG | 0.486326 | 6.2:+72648598 | MS.gene79784:CDS |
| ATTCCTTAGCAAAGACAAAT+GGG | 0.487126 | 6.2:-72652306 | None:intergenic |
| CAACATGAAGGTGGTGAGAA+AGG | 0.488878 | 6.2:+72649409 | MS.gene79784:CDS |
| AACTATCCTGCACCTAATCC+AGG | 0.489266 | 6.2:+72648730 | MS.gene79784:CDS |
| ACAATGGAACCAGCAGTGTC+AGG | 0.491234 | 6.2:-72648298 | None:intergenic |
| ATACTGTCAGATGCAGGACT+TGG | 0.497015 | 6.2:+72650047 | MS.gene79784:CDS |
| TGTCCCATTTGTCTTTGCTA+AGG | 0.502481 | 6.2:+72652303 | MS.gene79784:CDS |
| GGCATGGCTATGTTCAGTCT+TGG | 0.502767 | 6.2:+72650068 | MS.gene79784:CDS |
| AACATTCCTGGATTAGGTGC+AGG | 0.504642 | 6.2:-72648736 | None:intergenic |
| CATCCTGATATTCTAAGCAC+AGG | 0.506231 | 6.2:+72652337 | MS.gene79784:CDS |
| AACTAGAACCTCTAGGAGTA+GGG | 0.507744 | 6.2:-72648543 | None:intergenic |
| GTTAAGTTGAATGTGTCTCC+TGG | 0.512083 | 6.2:+72648940 | MS.gene79784:CDS |
| AGCCTTGTCATCACACTAGC+TGG | 0.516200 | 6.2:-72649460 | None:intergenic |
| AAGATCATAGCTACATAAAG+TGG | 0.519198 | 6.2:-72647848 | None:intergenic |
| GATGCTGAAATCAAAGAAGA+TGG | 0.521178 | 6.2:+72648379 | MS.gene79784:CDS |
| ATAGACTTTGCTATAATGGC+AGG | 0.526481 | 6.2:-72650020 | None:intergenic |
| ATCAACATGGATTGAAACAA+TGG | 0.535163 | 6.2:-72648314 | None:intergenic |
| TTGAATGTGTCTCCTGGAAA+AGG | 0.537666 | 6.2:+72648946 | MS.gene79784:CDS |
| GTGTTTGGTGGACATGACTT+TGG | 0.541105 | 6.2:+72648898 | MS.gene79784:CDS |
| ATTTCCATACTGTCAGATGC+AGG | 0.544656 | 6.2:+72650041 | MS.gene79784:CDS |
| CAGCTTTGGTAATAGAGGAA+TGG | 0.545118 | 6.2:+72649372 | MS.gene79784:CDS |
| ATTGGATGGTAGAACACCAT+TGG | 0.552263 | 6.2:+72648351 | MS.gene79784:CDS |
| ATTTCAGCATCAGTTTCCAA+TGG | 0.555165 | 6.2:-72648367 | None:intergenic |
| CAGCAAAGAGTGCAACAAAA+CGG | 0.557146 | 6.2:-72647931 | None:intergenic |
| GGTGGTGAGAAAGGTGGAGA+TGG | 0.565305 | 6.2:+72649418 | MS.gene79784:CDS |
| GTTAATGCTAAGAAGAGTAA+TGG | 0.571263 | 6.2:+72648805 | MS.gene79784:CDS |
| GGTTTATCTGCTAATTCAAG+AGG | 0.575033 | 6.2:+72648646 | MS.gene79784:CDS |
| CCACCAAACACATCAGAGAC+AGG | 0.575955 | 6.2:-72648886 | None:intergenic |
| TGGTAATAGAGGAATGGAAA+GGG | 0.578501 | 6.2:+72649378 | MS.gene79784:CDS |
| CACCAGCTAGTGTGATGACA+AGG | 0.584316 | 6.2:+72649458 | MS.gene79784:CDS |
| CTTATGGATCAGTAAAATGG+TGG | 0.591247 | 6.2:+72647873 | MS.gene79784:CDS |
| TTGGTAATAGAGGAATGGAA+AGG | 0.591523 | 6.2:+72649377 | MS.gene79784:CDS |
| TGGAGCAATTTCTCCAAAAG+GGG | 0.592702 | 6.2:+72648067 | MS.gene79784:CDS |
| CATGAAGGTGGTGAGAAAGG+TGG | 0.607207 | 6.2:+72649412 | MS.gene79784:CDS |
| ATGAAATGGAATGAAAGAAG+TGG | 0.614917 | 6.2:-72647956 | None:intergenic |
| GTCAGATGCAGGACTTGGCA+TGG | 0.620374 | 6.2:+72650052 | MS.gene79784:CDS |
| TGTTTGAGTTTAGAGGAGCA+AGG | 0.624922 | 6.2:+72648254 | MS.gene79784:CDS |
| CAACAGGCAGCTCTTCCACA+AGG | 0.629681 | 6.2:+72652277 | MS.gene79784:intron |
| AGGGAAATGAATCAACATGA+AGG | 0.630340 | 6.2:+72649397 | MS.gene79784:CDS |
| CCATGACAGCTGGACCAACA+AGG | 0.634447 | 6.2:-72651178 | None:intergenic |
| TCTGATGTCATGTCATTGGA+TGG | 0.636707 | 6.2:+72648337 | MS.gene79784:CDS |
| TGATTGAAACTAGAACCTCT+AGG | 0.649300 | 6.2:-72648550 | None:intergenic |
| TCAAGAAACCCTACTCCTAG+AGG | 0.654645 | 6.2:+72648535 | MS.gene79784:CDS |
| GAAATGAATCAACATGAAGG+TGG | 0.659006 | 6.2:+72649400 | MS.gene79784:CDS |
| CTACCATGTCATGACAGCAA+TGG | 0.661376 | 6.2:+72647823 | MS.gene79784:CDS |
| CTTGTCATCACACTAGCTGG+TGG | 0.667692 | 6.2:-72649457 | None:intergenic |
| ACATGACATCAGAATCAACA+TGG | 0.668465 | 6.2:-72648327 | None:intergenic |
| ACAAATGGGACAATTCCTTG+TGG | 0.669772 | 6.2:-72652292 | None:intergenic |
| GCACCATTGCTGTCATGACA+TGG | 0.674152 | 6.2:-72647826 | None:intergenic |
| ATCCTGATATTCTAAGCACA+GGG | 0.676564 | 6.2:+72652338 | MS.gene79784:CDS |
| GGGTCATAGAGACACTCAAG+AGG | 0.695679 | 6.2:+72649327 | MS.gene79784:CDS |
| ATTTACTCAAGAAGATCACA+AGG | 0.697954 | 6.2:+72648448 | MS.gene79784:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAAATTTTTAAAAAATA+TGG | - | chr6.2:72649850-72649869 | None:intergenic | 0.0% |
| !! | AAAGTGAATATTAAATAAAA+TGG | + | chr6.2:72651603-72651622 | MS.gene79784:intron | 10.0% |
| !! | AATAAAAAAATAAATTTCAG+TGG | + | chr6.2:72651445-72651464 | MS.gene79784:intron | 10.0% |
| !! | ATGTAAAAAATCAAAATTTA+AGG | - | chr6.2:72649257-72649276 | None:intergenic | 10.0% |
| !! | ATTAAAAGTGAATAAAAAAA+AGG | - | chr6.2:72651349-72651368 | None:intergenic | 10.0% |
| !!! | AATTACCATTAAAATTTTAT+AGG | + | chr6.2:72652022-72652041 | MS.gene79784:intron | 10.0% |
| !!! | ATTACCATTAAAATTTTATA+GGG | + | chr6.2:72652023-72652042 | MS.gene79784:intron | 10.0% |
| !! | AACAATTATCAAAATTAGAA+AGG | - | chr6.2:72650256-72650275 | None:intergenic | 15.0% |
| !! | ATAGTTATTAAAAAACAAAC+AGG | + | chr6.2:72651579-72651598 | MS.gene79784:intron | 15.0% |
| !! | CTTCGTATAAATATATATTT+GGG | - | chr6.2:72651813-72651832 | None:intergenic | 15.0% |
| !! | TCTTCGTATAAATATATATT+TGG | - | chr6.2:72651814-72651833 | None:intergenic | 15.0% |
| !!! | AAAGTGAATAAATTTTTTGT+AGG | - | chr6.2:72651885-72651904 | None:intergenic | 15.0% |
| !!! | TATTAGTTTGATTTTTATGT+TGG | + | chr6.2:72649276-72649295 | MS.gene79784:intron | 15.0% |
| !!! | TGAAAACTTTTTACAAAAAA+TGG | - | chr6.2:72651958-72651977 | None:intergenic | 15.0% |
| !! | AAAAAATAAATTTCAGTGGT+TGG | + | chr6.2:72651449-72651468 | MS.gene79784:intron | 20.0% |
| !! | AACAATAAACTAACTTATCT+TGG | - | chr6.2:72651416-72651435 | None:intergenic | 20.0% |
| !! | AATGATGTTGTTAATAACTA+TGG | + | chr6.2:72648625-72648644 | MS.gene79784:CDS | 20.0% |
| !! | ACCAATACTGAAAATAATTA+AGG | - | chr6.2:72652098-72652117 | None:intergenic | 20.0% |
| !! | ATTGTAATGGTTATGTTAAA+AGG | - | chr6.2:72651295-72651314 | None:intergenic | 20.0% |
| !! | CAAACTATAATCAATCAAAA+TGG | - | chr6.2:72649965-72649984 | None:intergenic | 20.0% |
| !! | CCAATACTGAAAATAATTAA+GGG | - | chr6.2:72652097-72652116 | None:intergenic | 20.0% |
| !! | TCAAATTTCAACATATTTAG+AGG | - | chr6.2:72650488-72650507 | None:intergenic | 20.0% |
| !! | TCTTACAAACTACAATATTA+TGG | + | chr6.2:72651991-72652010 | MS.gene79784:intron | 20.0% |
| !! | TTAAATAAGAGAATTCTAAG+AGG | + | chr6.2:72649231-72649250 | MS.gene79784:intron | 20.0% |
| !! | TTGTAATGGTTATGTTAAAA+GGG | - | chr6.2:72651294-72651313 | None:intergenic | 20.0% |
| !!! | AAAAACTATTTTCATATGCA+AGG | - | chr6.2:72649157-72649176 | None:intergenic | 20.0% |
| !!! | AAATTAGCTTTAAAAGATCT+TGG | + | chr6.2:72649727-72649746 | MS.gene79784:intron | 20.0% |
| !!! | AATCTTTTTTCACTCTTTTA+AGG | + | chr6.2:72650411-72650430 | MS.gene79784:intron | 20.0% |
| !!! | ACTGATTTTTATTCTATGAT+GGG | + | chr6.2:72648574-72648593 | MS.gene79784:CDS | 20.0% |
| !!! | CATTTTGATTGATTATAGTT+TGG | + | chr6.2:72649963-72649982 | MS.gene79784:intron | 20.0% |
| !!! | CTAATATGTCTTTTGTTAAT+CGG | - | chr6.2:72650868-72650887 | None:intergenic | 20.0% |
| !!! | GAAATTTTACATATGTAATG+TGG | - | chr6.2:72649609-72649628 | None:intergenic | 20.0% |
| !!! | TACTGATTTTTATTCTATGA+TGG | + | chr6.2:72648573-72648592 | MS.gene79784:CDS | 20.0% |
| !!! | TAGTCCCTATAAAATTTTAA+TGG | - | chr6.2:72652030-72652049 | None:intergenic | 20.0% |
| !!! | TATTTTTATAGGGACTATTT+TGG | + | chr6.2:72651918-72651937 | MS.gene79784:intron | 20.0% |
| !!! | TCCTTACTTGTATTTTTATA+GGG | + | chr6.2:72651908-72651927 | MS.gene79784:intron | 20.0% |
| ! | AAGATCTTCATATGTTTGTT+TGG | + | chr6.2:72648848-72648867 | MS.gene79784:CDS | 25.0% |
| ! | AAGTGAATAAAAAAAAGGAG+AGG | - | chr6.2:72651344-72651363 | None:intergenic | 25.0% |
| ! | AATAATGGTAGCAAAAATCT+TGG | + | chr6.2:72648769-72648788 | MS.gene79784:CDS | 25.0% |
| ! | AATTATTACTTCAGGTGATT+AGG | - | chr6.2:72649645-72649664 | None:intergenic | 25.0% |
| ! | AATTTGACATTGTAATCTTG+AGG | - | chr6.2:72651676-72651695 | None:intergenic | 25.0% |
| ! | ACAAACAAACATGTTAAATG+TGG | - | chr6.2:72652226-72652245 | None:intergenic | 25.0% |
| ! | ATAAATGCTCACAATTTATG+CGG | - | chr6.2:72649786-72649805 | None:intergenic | 25.0% |
| ! | ATAAGTAGTTTATCCAAACA+AGG | - | chr6.2:72649014-72649033 | None:intergenic | 25.0% |
| ! | ATATTTAGAGGAGTTAAGAT+GGG | - | chr6.2:72650476-72650495 | None:intergenic | 25.0% |
| ! | ATATTTGTACAACAAACAGT+TGG | + | chr6.2:72652198-72652217 | MS.gene79784:intron | 25.0% |
| ! | ATTATTACTTCAGGTGATTA+GGG | - | chr6.2:72649644-72649663 | None:intergenic | 25.0% |
| ! | ATTTGACATTGTAATCTTGA+GGG | - | chr6.2:72651675-72651694 | None:intergenic | 25.0% |
| ! | CATAGACTGAAAATAGTTTA+CGG | + | chr6.2:72649130-72649149 | MS.gene79784:intron | 25.0% |
| ! | GTACAAAAATATATGCACTA+TGG | + | chr6.2:72651481-72651500 | MS.gene79784:intron | 25.0% |
| ! | TACAAACTACAATATTATGG+AGG | + | chr6.2:72651994-72652013 | MS.gene79784:intron | 25.0% |
| ! | TCCCTATAAAAATACAAGTA+AGG | - | chr6.2:72651912-72651931 | None:intergenic | 25.0% |
| ! | TCTAATTACCAAAAAACAAC+AGG | + | chr6.2:72652261-72652280 | MS.gene79784:intron | 25.0% |
| ! | TGGAATCAATATGAAGAATT+TGG | - | chr6.2:72649945-72649964 | None:intergenic | 25.0% |
| ! | TTGCAAATACTAACATTCTT+TGG | + | chr6.2:72651509-72651528 | MS.gene79784:intron | 25.0% |
| ! | TTGTTCTTCAATGTATCATT+TGG | + | chr6.2:72648212-72648231 | MS.gene79784:CDS | 25.0% |
| !! | ATGTTTTCTCCTACAAATAA+TGG | + | chr6.2:72648754-72648773 | MS.gene79784:CDS | 25.0% |
| !! | CAATTTGTTTGATGAATTAG+TGG | + | chr6.2:72649303-72649322 | MS.gene79784:intron | 25.0% |
| !! | CCCTTAATTATTTTCAGTAT+TGG | + | chr6.2:72652094-72652113 | MS.gene79784:intron | 25.0% |
| !! | TCTTATTTCTTCTTGCTATA+TGG | + | chr6.2:72648047-72648066 | MS.gene79784:CDS | 25.0% |
| !! | TGTAAACTCATGATTTTGTA+GGG | + | chr6.2:72652054-72652073 | MS.gene79784:intron | 25.0% |
| !! | TTGTAAACTCATGATTTTGT+AGG | + | chr6.2:72652053-72652072 | MS.gene79784:intron | 25.0% |
| !! | TTTTTGCTACCATTATTTGT+AGG | - | chr6.2:72648766-72648785 | None:intergenic | 25.0% |
| !!! | AAAAAAGGAGAGGAATTTTT+TGG | - | chr6.2:72651334-72651353 | None:intergenic | 25.0% |
| !!! | GTCCTTACTTGTATTTTTAT+AGG | + | chr6.2:72651907-72651926 | MS.gene79784:intron | 25.0% |
| !!! | GTCGTTCATTTTTTATTAGA+TGG | + | chr6.2:72649749-72649768 | MS.gene79784:intron | 25.0% |
| !!! | TAATGTTTTATTCGTTAGTC+AGG | - | chr6.2:72650804-72650823 | None:intergenic | 25.0% |
| !!! | TGAATTTTCAGGTAGTTTAA+TGG | + | chr6.2:72648180-72648199 | MS.gene79784:CDS | 25.0% |
| AAAAAACAAGACCTGAACAA+TGG | - | chr6.2:72651252-72651271 | None:intergenic | 30.0% | |
| AAGATCATAGCTACATAAAG+TGG | - | chr6.2:72647851-72647870 | None:intergenic | 30.0% | |
| ATCCTTACAAAATGAACCTT+AGG | + | chr6.2:72647990-72648009 | MS.gene79784:CDS | 30.0% | |
| ATGAAATGGAATGAAAGAAG+TGG | - | chr6.2:72647959-72647978 | None:intergenic | 30.0% | |
| ATGGGAATTCCTTTACTTAA+AGG | + | chr6.2:72648148-72648167 | MS.gene79784:CDS | 30.0% | |
| ATTAAGCTAGAGTAAGTGTT+TGG | - | chr6.2:72649523-72649542 | None:intergenic | 30.0% | |
| ATTCCTTAGCAAAGACAAAT+GGG | - | chr6.2:72652309-72652328 | None:intergenic | 30.0% | |
| ATTTACTCAAGAAGATCACA+AGG | + | chr6.2:72648448-72648467 | MS.gene79784:CDS | 30.0% | |
| CATATTTAGAGGAGTTAAGA+TGG | - | chr6.2:72650477-72650496 | None:intergenic | 30.0% | |
| CCATACATTCCTTTAAGTAA+AGG | - | chr6.2:72648160-72648179 | None:intergenic | 30.0% | |
| CCTTTACTTAAAGGAATGTA+TGG | + | chr6.2:72648157-72648176 | MS.gene79784:CDS | 30.0% | |
| GAAGGTAAAGGTAAAAAAGA+AGG | - | chr6.2:72648986-72649005 | None:intergenic | 30.0% | |
| GATTGACTGAAGATATATAG+TGG | + | chr6.2:72651024-72651043 | MS.gene79784:intron | 30.0% | |
| GATTGTTTGATGCTATGAAA+TGG | - | chr6.2:72647973-72647992 | None:intergenic | 30.0% | |
| GCATGCAATGAATATTGTAA+TGG | - | chr6.2:72651308-72651327 | None:intergenic | 30.0% | |
| GCTTCTTCTTCATAATTAGA+AGG | - | chr6.2:72648685-72648704 | None:intergenic | 30.0% | |
| GTTAATGCTAAGAAGAGTAA+TGG | + | chr6.2:72648805-72648824 | MS.gene79784:CDS | 30.0% | |
| TAGCTTATGGATCAGTAAAA+TGG | + | chr6.2:72647870-72647889 | MS.gene79784:CDS | 30.0% | |
| TAGTGGTGATACTAATTGAT+TGG | + | chr6.2:72651041-72651060 | MS.gene79784:intron | 30.0% | |
| TATTCCTTAGCAAAGACAAA+TGG | - | chr6.2:72652310-72652329 | None:intergenic | 30.0% | |
| TCAGCATTAGTAAGATTAGA+AGG | - | chr6.2:72648496-72648515 | None:intergenic | 30.0% | |
| TCTTCATAATTAGAAGGTCT+TGG | - | chr6.2:72648679-72648698 | None:intergenic | 30.0% | |
| TTAGTAAGATTAGAAGGTCT+TGG | - | chr6.2:72648490-72648509 | None:intergenic | 30.0% | |
| TTGTTTGATGAATTAGTGGA+GGG | + | chr6.2:72649307-72649326 | MS.gene79784:intron | 30.0% | |
| TTTCAGTGGTTGGAATTTAT+TGG | + | chr6.2:72651459-72651478 | MS.gene79784:intron | 30.0% | |
| TTTGTTTGATGAATTAGTGG+AGG | + | chr6.2:72649306-72649325 | MS.gene79784:intron | 30.0% | |
| ! | AAAAATAACCAACCTTTTCC+AGG | - | chr6.2:72648961-72648980 | None:intergenic | 30.0% |
| ! | AACACTTACTCTAGCTTAAT+TGG | + | chr6.2:72649523-72649542 | MS.gene79784:CDS | 30.0% |
| ! | AACCTAAGGTTCATTTTGTA+AGG | - | chr6.2:72647995-72648014 | None:intergenic | 30.0% |
| ! | ATCAACATGGATTGAAACAA+TGG | - | chr6.2:72648317-72648336 | None:intergenic | 30.0% |
| ! | GACAAGGCTTATATTGATTA+TGG | + | chr6.2:72649474-72649493 | MS.gene79784:CDS | 30.0% |
| ! | GGAAATAGACTTTGCTATAA+TGG | - | chr6.2:72650027-72650046 | None:intergenic | 30.0% |
| ! | GGCTTATATTGATTATGGTT+TGG | + | chr6.2:72649479-72649498 | MS.gene79784:CDS | 30.0% |
| ! | TTGGTAATTAGATGCCAAAT+TGG | - | chr6.2:72652253-72652272 | None:intergenic | 30.0% |
| ! | TTTCCACATGCTATGATTTT+TGG | - | chr6.2:72651125-72651144 | None:intergenic | 30.0% |
| ! | TTTTATTCGTTAGTCAGGTT+CGG | - | chr6.2:72650799-72650818 | None:intergenic | 30.0% |
| !! | CTTTTCATGTTTGAGTTTAG+AGG | + | chr6.2:72648247-72648266 | MS.gene79784:CDS | 30.0% |
| !! | GATTTTTATTCTATGATGGG+TGG | + | chr6.2:72648577-72648596 | MS.gene79784:CDS | 30.0% |
| !! | TTTTATAGGGACTATTTTGG+AGG | + | chr6.2:72651921-72651940 | MS.gene79784:intron | 30.0% |
| !!! | GCTCTAACTTTTACTTTTTC+AGG | - | chr6.2:72650211-72650230 | None:intergenic | 30.0% |
| AACAAGGTCTAAGAAGGTAA+AGG | - | chr6.2:72648998-72649017 | None:intergenic | 35.0% | |
| AAGTTCAAATTCAATGGCGT+CGG | - | chr6.2:72651649-72651668 | None:intergenic | 35.0% | |
| ACATGACATCAGAATCAACA+TGG | - | chr6.2:72648330-72648349 | None:intergenic | 35.0% | |
| ACCTGAAGTAATAATTCCAC+GGG | + | chr6.2:72649649-72649668 | MS.gene79784:intron | 35.0% | |
| ACTTCCAAACACTTTGGTTA+TGG | + | chr6.2:72648129-72648148 | MS.gene79784:CDS | 35.0% | |
| AGGGAAATGAATCAACATGA+AGG | + | chr6.2:72649397-72649416 | MS.gene79784:CDS | 35.0% | |
| ATCCTGATATTCTAAGCACA+GGG | + | chr6.2:72652338-72652357 | MS.gene79784:CDS | 35.0% | |
| ATGGAGCAATTTCTCCAAAA+GGG | + | chr6.2:72648066-72648085 | MS.gene79784:CDS | 35.0% | |
| ATTTCAGCATCAGTTTCCAA+TGG | - | chr6.2:72648370-72648389 | None:intergenic | 35.0% | |
| CAACCAAAAATCATAGCATG+TGG | + | chr6.2:72651119-72651138 | MS.gene79784:CDS | 35.0% | |
| CACCTGAAGTAATAATTCCA+CGG | + | chr6.2:72649648-72649667 | MS.gene79784:intron | 35.0% | |
| CTTATGGATCAGTAAAATGG+TGG | + | chr6.2:72647873-72647892 | MS.gene79784:CDS | 35.0% | |
| CTTCCAAACACTTTGGTTAT+GGG | + | chr6.2:72648130-72648149 | MS.gene79784:CDS | 35.0% | |
| GAAATGAATCAACATGAAGG+TGG | + | chr6.2:72649400-72649419 | MS.gene79784:CDS | 35.0% | |
| GAGAAAGATGAATTCAGCTT+TGG | + | chr6.2:72649358-72649377 | MS.gene79784:CDS | 35.0% | |
| GATGCTGAAATCAAAGAAGA+TGG | + | chr6.2:72648379-72648398 | MS.gene79784:CDS | 35.0% | |
| GGGTTGAAGTTCAAATTCAA+TGG | - | chr6.2:72651655-72651674 | None:intergenic | 35.0% | |
| GGTTTATCTGCTAATTCAAG+AGG | + | chr6.2:72648646-72648665 | MS.gene79784:CDS | 35.0% | |
| GTAGCTATGATCTTAGCTTA+TGG | + | chr6.2:72647857-72647876 | MS.gene79784:CDS | 35.0% | |
| GTTTGTTTGTCTGTCCAATT+TGG | + | chr6.2:72652236-72652255 | MS.gene79784:intron | 35.0% | |
| TATCAGCTGCTAAAAACCTA+AGG | - | chr6.2:72648009-72648028 | None:intergenic | 35.0% | |
| TATCCAAACAAGGTCTAAGA+AGG | - | chr6.2:72649004-72649023 | None:intergenic | 35.0% | |
| TATGGAGCAATTTCTCCAAA+AGG | + | chr6.2:72648065-72648084 | MS.gene79784:CDS | 35.0% | |
| TGATTCTGATGTCATGTCAT+TGG | + | chr6.2:72648333-72648352 | MS.gene79784:CDS | 35.0% | |
| TGATTGAAACTAGAACCTCT+AGG | - | chr6.2:72648553-72648572 | None:intergenic | 35.0% | |
| TGGTAATAGAGGAATGGAAA+GGG | + | chr6.2:72649378-72649397 | MS.gene79784:CDS | 35.0% | |
| TTACCTTCTTAGACCTTGTT+TGG | + | chr6.2:72648998-72649017 | MS.gene79784:intron | 35.0% | |
| TTGATTCCTGAACATTGATC+AGG | - | chr6.2:72647911-72647930 | None:intergenic | 35.0% | |
| TTGGTTGTGTTGTATATTGC+AGG | + | chr6.2:72649982-72650001 | MS.gene79784:intron | 35.0% | |
| TTTGTAGGAGAAAACATTCC+TGG | - | chr6.2:72648751-72648770 | None:intergenic | 35.0% | |
| ! | ATAGACTTTGCTATAATGGC+AGG | - | chr6.2:72650023-72650042 | None:intergenic | 35.0% |
| ! | ATTCCCATAACCAAAGTGTT+TGG | - | chr6.2:72648136-72648155 | None:intergenic | 35.0% |
| ! | GAATTCAGCTTTGGTAATAG+AGG | + | chr6.2:72649367-72649386 | MS.gene79784:CDS | 35.0% |
| ! | GGAATGTATGGTGAATTTTC+AGG | + | chr6.2:72648169-72648188 | MS.gene79784:CDS | 35.0% |
| ! | TTGGTAATAGAGGAATGGAA+AGG | + | chr6.2:72649377-72649396 | MS.gene79784:CDS | 35.0% |
| ! | TTTTCACCTGATCAATGTTC+AGG | + | chr6.2:72647902-72647921 | MS.gene79784:CDS | 35.0% |
| !! | TCCATTGCAGCTTTTTCTAT+GGG | + | chr6.2:72651146-72651165 | MS.gene79784:CDS | 35.0% |
| !! | TTCCATTGCAGCTTTTTCTA+TGG | + | chr6.2:72651145-72651164 | MS.gene79784:CDS | 35.0% |
| !!! | AAAGGAGAGGAATTTTTTGG+AGG | - | chr6.2:72651331-72651350 | None:intergenic | 35.0% |
| !!! | AAGGAGAGGAATTTTTTGGA+GGG | - | chr6.2:72651330-72651349 | None:intergenic | 35.0% |
| !!! | TGTTTTGACAGGTTTGTTCA+TGG | + | chr6.2:72651091-72651110 | MS.gene79784:intron | 35.0% |
| !!! | TTTTATTCTATGATGGGTGG+TGG | + | chr6.2:72648580-72648599 | MS.gene79784:CDS | 35.0% |
| ACAAATGGGACAATTCCTTG+TGG | - | chr6.2:72652295-72652314 | None:intergenic | 40.0% | |
| ACCCATAGAAAAAGCTGCAA+TGG | - | chr6.2:72651150-72651169 | None:intergenic | 40.0% | |
| AGACACTCAAGAGGACTATT+TGG | + | chr6.2:72649336-72649355 | MS.gene79784:CDS | 40.0% | |
| ATTGGATGGTAGAACACCAT+TGG | + | chr6.2:72648351-72648370 | MS.gene79784:CDS | 40.0% | |
| ATTTCCATACTGTCAGATGC+AGG | + | chr6.2:72650041-72650060 | MS.gene79784:CDS | 40.0% | |
| CATCCTGATATTCTAAGCAC+AGG | + | chr6.2:72652337-72652356 | MS.gene79784:CDS | 40.0% | |
| CCAAAAGGGGTTGTTTAGAA+TGG | + | chr6.2:72648080-72648099 | MS.gene79784:CDS | 40.0% | |
| CCTGAAGTAATAATTCCACG+GGG | + | chr6.2:72649650-72649669 | MS.gene79784:intron | 40.0% | |
| CTCAACACTTCCAAACACTT+TGG | + | chr6.2:72648123-72648142 | MS.gene79784:CDS | 40.0% | |
| CTTTCATGTTGCCATTGTTC+AGG | + | chr6.2:72651238-72651257 | MS.gene79784:CDS | 40.0% | |
| GGAGAAAACATTCCTGGATT+AGG | - | chr6.2:72648745-72648764 | None:intergenic | 40.0% | |
| GGTGGAAGAAACTCAAACTT+TGG | + | chr6.2:72648598-72648617 | MS.gene79784:CDS | 40.0% | |
| TCAAAACAAGCATGCCAAAG+AGG | - | chr6.2:72651079-72651098 | None:intergenic | 40.0% | |
| TCTGATGTCATGTCATTGGA+TGG | + | chr6.2:72648337-72648356 | MS.gene79784:CDS | 40.0% | |
| TGGAGCAATTTCTCCAAAAG+GGG | + | chr6.2:72648067-72648086 | MS.gene79784:CDS | 40.0% | |
| TGTCCCATTTGTCTTTGCTA+AGG | + | chr6.2:72652303-72652322 | MS.gene79784:CDS | 40.0% | |
| TTGAATGTGTCTCCTGGAAA+AGG | + | chr6.2:72648946-72648965 | MS.gene79784:CDS | 40.0% | |
| ! | AAACTAGAACCTCTAGGAGT+AGG | - | chr6.2:72648547-72648566 | None:intergenic | 40.0% |
| ! | AACTAGAACCTCTAGGAGTA+GGG | - | chr6.2:72648546-72648565 | None:intergenic | 40.0% |
| ! | AATTGGTCTCACTTGGTCTT+TGG | + | chr6.2:72649540-72649559 | MS.gene79784:CDS | 40.0% |
| ! | CAGCAAAGAGTGCAACAAAA+CGG | - | chr6.2:72647934-72647953 | None:intergenic | 40.0% |
| ! | CAGCTTTGGTAATAGAGGAA+TGG | + | chr6.2:72649372-72649391 | MS.gene79784:CDS | 40.0% |
| ! | CCATTCTAAACAACCCCTTT+TGG | - | chr6.2:72648083-72648102 | None:intergenic | 40.0% |
| ! | CTAGCTTAATTGGTCTCACT+TGG | + | chr6.2:72649533-72649552 | MS.gene79784:CDS | 40.0% |
| ! | CTTGGTCTTTGGTTTCATTC+AGG | + | chr6.2:72649551-72649570 | MS.gene79784:CDS | 40.0% |
| ! | TGTTTGAGTTTAGAGGAGCA+AGG | + | chr6.2:72648254-72648273 | MS.gene79784:CDS | 40.0% |
| !! | GTTAAGTTGAATGTGTCTCC+TGG | + | chr6.2:72648940-72648959 | MS.gene79784:CDS | 40.0% |
| !! | TCATTTGCTGTTGGACTCAA+AGG | + | chr6.2:72651209-72651228 | MS.gene79784:CDS | 40.0% |
| !!! | AAGAGCTGCCTGTTGTTTTT+TGG | - | chr6.2:72652272-72652291 | None:intergenic | 40.0% |
| !!! | TTTGGCATGCTTGTTTTGAC+AGG | + | chr6.2:72651080-72651099 | MS.gene79784:intron | 40.0% |
| AAACAAGCATGCCAAAGAGG+AGG | - | chr6.2:72651076-72651095 | None:intergenic | 45.0% | |
| AACTATCCTGCACCTAATCC+AGG | + | chr6.2:72648730-72648749 | MS.gene79784:CDS | 45.0% | |
| AAGTCCTGCATCTGACAGTA+TGG | - | chr6.2:72650048-72650067 | None:intergenic | 45.0% | |
| ACCTCATCACATCACAAGCT+TGG | - | chr6.2:72650954-72650973 | None:intergenic | 45.0% | |
| ATACTGTCAGATGCAGGACT+TGG | + | chr6.2:72650047-72650066 | MS.gene79784:CDS | 45.0% | |
| ATGGGTGTGAGATTCCTTGT+TGG | + | chr6.2:72651164-72651183 | MS.gene79784:CDS | 45.0% | |
| ATGTGATGAGGTGTGGTTAG+TGG | + | chr6.2:72650962-72650981 | MS.gene79784:intron | 45.0% | |
| ATGTGTCTCCTGGAAAAGGT+TGG | + | chr6.2:72648950-72648969 | MS.gene79784:intron | 45.0% | |
| CAAAGCAAGCAAGCAAGCAA+AGG | + | chr6.2:72650306-72650325 | MS.gene79784:intron | 45.0% | |
| CAACATGAAGGTGGTGAGAA+AGG | + | chr6.2:72649409-72649428 | MS.gene79784:CDS | 45.0% | |
| CACCCTGTGCTTAGAATATC+AGG | - | chr6.2:72652343-72652362 | None:intergenic | 45.0% | |
| CCCCGTGGAATTATTACTTC+AGG | - | chr6.2:72649653-72649672 | None:intergenic | 45.0% | |
| CTACCATGTCATGACAGCAA+TGG | + | chr6.2:72647823-72647842 | MS.gene79784:CDS | 45.0% | |
| GCGTGCAATCGTTGAAGAAA+GGG | + | chr6.2:72649916-72649935 | MS.gene79784:intron | 45.0% | |
| TCAAGAAACCCTACTCCTAG+AGG | + | chr6.2:72648535-72648554 | MS.gene79784:CDS | 45.0% | |
| TCACCTGTCTCTGATGTGTT+TGG | + | chr6.2:72648883-72648902 | MS.gene79784:CDS | 45.0% | |
| TGCGTGCAATCGTTGAAGAA+AGG | + | chr6.2:72649915-72649934 | MS.gene79784:intron | 45.0% | |
| ! | AACATTCCTGGATTAGGTGC+AGG | - | chr6.2:72648739-72648758 | None:intergenic | 45.0% |
| ! | GTGTTTGGTGGACATGACTT+TGG | + | chr6.2:72648898-72648917 | MS.gene79784:CDS | 45.0% |
| ! | TTCCACGGGGTAAACGATTT+TGG | + | chr6.2:72649663-72649682 | MS.gene79784:intron | 45.0% |
| !! | TTTGAATAATAATTAATTAT+TGG | + | chr6.2:72651841-72651860 | MS.gene79784:intron | 5.0% |
| !!! | TTTTAAATTAACTTTTATTA+TGG | + | chr6.2:72650675-72650694 | MS.gene79784:intron | 5.0% |
| ACAATGGAACCAGCAGTGTC+AGG | - | chr6.2:72648301-72648320 | None:intergenic | 50.0% | |
| AGCAAGCAAGCAAGCAAAGG+TGG | + | chr6.2:72650309-72650328 | MS.gene79784:intron | 50.0% | |
| CACCAGCTAGTGTGATGACA+AGG | + | chr6.2:72649458-72649477 | MS.gene79784:CDS | 50.0% | |
| CATGAAGGTGGTGAGAAAGG+TGG | + | chr6.2:72649412-72649431 | MS.gene79784:CDS | 50.0% | |
| CCACCAAACACATCAGAGAC+AGG | - | chr6.2:72648889-72648908 | None:intergenic | 50.0% | |
| CCTGTCTCTGATGTGTTTGG+TGG | + | chr6.2:72648886-72648905 | MS.gene79784:CDS | 50.0% | |
| CTTGTCATCACACTAGCTGG+TGG | - | chr6.2:72649460-72649479 | None:intergenic | 50.0% | |
| GAACAGTTTCCTGACACTGC+TGG | + | chr6.2:72648289-72648308 | MS.gene79784:CDS | 50.0% | |
| GACCAAAATCGTTTACCCCG+TGG | - | chr6.2:72649668-72649687 | None:intergenic | 50.0% | |
| GCACCATTGCTGTCATGACA+TGG | - | chr6.2:72647829-72647848 | None:intergenic | 50.0% | |
| GCCAAGCTTGTGATGTGATG+AGG | + | chr6.2:72650950-72650969 | MS.gene79784:intron | 50.0% | |
| GCTTGTGATGTGATGAGGTG+TGG | + | chr6.2:72650955-72650974 | MS.gene79784:intron | 50.0% | |
| GGCATGGCTATGTTCAGTCT+TGG | + | chr6.2:72650068-72650087 | MS.gene79784:CDS | 50.0% | |
| GGGTCATAGAGACACTCAAG+AGG | + | chr6.2:72649327-72649346 | MS.gene79784:CDS | 50.0% | |
| TGATGAGGTGTGGTTAGTGG+TGG | + | chr6.2:72650965-72650984 | MS.gene79784:intron | 50.0% | |
| ! | AGCCTTGTCATCACACTAGC+TGG | - | chr6.2:72649463-72649482 | None:intergenic | 50.0% |
| !! | GCAGCTGCTTCATTTGCTGT+TGG | + | chr6.2:72651200-72651219 | MS.gene79784:CDS | 50.0% |
| CAACAGGCAGCTCTTCCACA+AGG | + | chr6.2:72652277-72652296 | MS.gene79784:intron | 55.0% | |
| CCATGACAGCTGGACCAACA+AGG | - | chr6.2:72651181-72651200 | None:intergenic | 55.0% | |
| CCTTGTTGGTCCAGCTGTCA+TGG | + | chr6.2:72651178-72651197 | MS.gene79784:CDS | 55.0% | |
| GCAAGCAAGCAAAGGTGGAG+TGG | + | chr6.2:72650314-72650333 | MS.gene79784:intron | 55.0% | |
| GGCATGCTTTGCCTCCTCTT+TGG | + | chr6.2:72651062-72651081 | MS.gene79784:intron | 55.0% | |
| GGTGGTGAGAAAGGTGGAGA+TGG | + | chr6.2:72649418-72649437 | MS.gene79784:CDS | 55.0% | |
| GTCAGATGCAGGACTTGGCA+TGG | + | chr6.2:72650052-72650071 | MS.gene79784:CDS | 55.0% | |
| GAAGCAGCTGCCATGACAGC+TGG | - | chr6.2:72651191-72651210 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 72647803 | 72652363 | 72647803 | ID=MS.gene79784 |
| chr6.2 | mRNA | 72647803 | 72652363 | 72647803 | ID=MS.gene79784.t1;Parent=MS.gene79784 |
| chr6.2 | exon | 72647803 | 72648967 | 72647803 | ID=MS.gene79784.t1.exon1;Parent=MS.gene79784.t1 |
| chr6.2 | CDS | 72647803 | 72648967 | 72647803 | ID=cds.MS.gene79784.t1;Parent=MS.gene79784.t1 |
| chr6.2 | exon | 72649323 | 72649572 | 72649323 | ID=MS.gene79784.t1.exon2;Parent=MS.gene79784.t1 |
| chr6.2 | CDS | 72649323 | 72649572 | 72649323 | ID=cds.MS.gene79784.t1;Parent=MS.gene79784.t1 |
| chr6.2 | exon | 72650004 | 72650089 | 72650004 | ID=MS.gene79784.t1.exon3;Parent=MS.gene79784.t1 |
| chr6.2 | CDS | 72650004 | 72650089 | 72650004 | ID=cds.MS.gene79784.t1;Parent=MS.gene79784.t1 |
| chr6.2 | exon | 72651102 | 72651259 | 72651102 | ID=MS.gene79784.t1.exon4;Parent=MS.gene79784.t1 |
| chr6.2 | CDS | 72651102 | 72651259 | 72651102 | ID=cds.MS.gene79784.t1;Parent=MS.gene79784.t1 |
| chr6.2 | exon | 72652283 | 72652363 | 72652283 | ID=MS.gene79784.t1.exon5;Parent=MS.gene79784.t1 |
| chr6.2 | CDS | 72652283 | 72652363 | 72652283 | ID=cds.MS.gene79784.t1;Parent=MS.gene79784.t1 |
| Gene Sequence |
| Protein sequence |
