Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052150.t1 | XP_013465932.1 | 95.2 | 189 | 4 | 2 | 1 | 188 | 42 | 226 | 2.90E-82 | 314.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052150.t1 | O04135 | 56.4 | 204 | 70 | 6 | 1 | 187 | 41 | 242 | 2.7e-44 | 179.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052150.t1 | X2D315 | 95.2 | 189 | 4 | 2 | 1 | 188 | 42 | 226 | 2.1e-82 | 314.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049660 | MS.gene052150 | 0.819695 | 1.01E-52 | -1.69E-46 |
| MS.gene05054 | MS.gene052150 | 0.80598 | 1.03E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene052150 | 0.941961 | 1.67E-101 | -1.69E-46 |
| MS.gene052150 | MS.gene052151 | 0.975066 | 2.82E-139 | -1.69E-46 |
| MS.gene052150 | MS.gene053536 | 0.802514 | 5.41E-49 | -1.69E-46 |
| MS.gene052150 | MS.gene056169 | 0.802078 | 6.65E-49 | -1.69E-46 |
| MS.gene052150 | MS.gene057082 | 0.818818 | 1.61E-52 | -1.69E-46 |
| MS.gene052150 | MS.gene05894 | 0.829082 | 6.28E-55 | -1.69E-46 |
| MS.gene052150 | MS.gene061773 | 0.825716 | 4.03E-54 | -1.69E-46 |
| MS.gene052150 | MS.gene061774 | 0.816714 | 4.80E-52 | -1.69E-46 |
| MS.gene052150 | MS.gene061775 | 0.806725 | 7.15E-50 | -1.69E-46 |
| MS.gene052150 | MS.gene065643 | 0.802636 | 5.11E-49 | -1.69E-46 |
| MS.gene052150 | MS.gene065674 | 0.812072 | 5.10E-51 | -1.69E-46 |
| MS.gene052150 | MS.gene066010 | 0.838572 | 2.66E-57 | -1.69E-46 |
| MS.gene052150 | MS.gene069556 | 0.81097 | 8.84E-51 | -1.69E-46 |
| MS.gene052150 | MS.gene069852 | 0.807688 | 4.47E-50 | -1.69E-46 |
| MS.gene052150 | MS.gene07723 | 0.807511 | 4.88E-50 | -1.69E-46 |
| MS.gene052150 | MS.gene21018 | 0.811543 | 6.64E-51 | -1.69E-46 |
| MS.gene052150 | MS.gene21026 | 0.839066 | 1.98E-57 | -1.69E-46 |
| MS.gene052150 | MS.gene23880 | 0.802386 | 5.75E-49 | -1.69E-46 |
| MS.gene052150 | MS.gene24527 | 0.939921 | 5.63E-100 | -1.69E-46 |
| MS.gene052150 | MS.gene24528 | 0.857086 | 2.07E-62 | -1.69E-46 |
| MS.gene052150 | MS.gene26387 | 0.804942 | 1.70E-49 | -1.69E-46 |
| MS.gene052150 | MS.gene26465 | 0.802743 | 4.85E-49 | -1.69E-46 |
| MS.gene052150 | MS.gene26855 | 0.81095 | 8.93E-51 | -1.69E-46 |
| MS.gene052150 | MS.gene27274 | 0.808768 | 2.63E-50 | -1.69E-46 |
| MS.gene052150 | MS.gene27646 | -0.802591 | 5.22E-49 | -1.69E-46 |
| MS.gene052150 | MS.gene28281 | 0.808371 | 3.20E-50 | -1.69E-46 |
| MS.gene052150 | MS.gene31350 | 0.802176 | 6.35E-49 | -1.69E-46 |
| MS.gene052150 | MS.gene32854 | 0.83229 | 1.03E-55 | -1.69E-46 |
| MS.gene052150 | MS.gene32920 | 0.803454 | 3.46E-49 | -1.69E-46 |
| MS.gene052150 | MS.gene35441 | 0.826792 | 2.23E-54 | -1.69E-46 |
| MS.gene052150 | MS.gene37460 | 0.81936 | 1.21E-52 | -1.69E-46 |
| MS.gene052150 | MS.gene38101 | 0.830844 | 2.34E-55 | -1.69E-46 |
| MS.gene052150 | MS.gene38167 | 0.816748 | 4.71E-52 | -1.69E-46 |
| MS.gene052150 | MS.gene38688 | 0.822218 | 2.66E-53 | -1.69E-46 |
| MS.gene052150 | MS.gene39052 | 0.803299 | 3.73E-49 | -1.69E-46 |
| MS.gene052150 | MS.gene40787 | 0.839671 | 1.38E-57 | -1.69E-46 |
| MS.gene052150 | MS.gene43171 | 0.813387 | 2.63E-51 | -1.69E-46 |
| MS.gene052150 | MS.gene44340 | 0.824539 | 7.64E-54 | -1.69E-46 |
| MS.gene052150 | MS.gene44341 | 0.822749 | 2.01E-53 | -1.69E-46 |
| MS.gene052150 | MS.gene45937 | 0.816482 | 5.41E-52 | -1.69E-46 |
| MS.gene052150 | MS.gene49973 | 0.812966 | 3.25E-51 | -1.69E-46 |
| MS.gene052150 | MS.gene52996 | 0.82394 | 1.06E-53 | -1.69E-46 |
| MS.gene052150 | MS.gene54825 | 0.811688 | 6.18E-51 | -1.69E-46 |
| MS.gene052150 | MS.gene55101 | 0.818459 | 1.94E-52 | -1.69E-46 |
| MS.gene052150 | MS.gene57665 | 0.837501 | 5.01E-57 | -1.69E-46 |
| MS.gene052150 | MS.gene57873 | 0.801048 | 1.08E-48 | -1.69E-46 |
| MS.gene052150 | MS.gene59847 | 0.803295 | 3.73E-49 | -1.69E-46 |
| MS.gene052150 | MS.gene59849 | 0.823309 | 1.48E-53 | -1.69E-46 |
| MS.gene052150 | MS.gene64442 | 0.810753 | 9.85E-51 | -1.69E-46 |
| MS.gene052150 | MS.gene66496 | 0.81015 | 1.33E-50 | -1.69E-46 |
| MS.gene052150 | MS.gene71698 | 0.813541 | 2.43E-51 | -1.69E-46 |
| MS.gene052150 | MS.gene72487 | 0.840106 | 1.06E-57 | -1.69E-46 |
| MS.gene052150 | MS.gene76518 | 0.812829 | 3.48E-51 | -1.69E-46 |
| MS.gene052150 | MS.gene77734 | 0.832896 | 7.28E-56 | -1.69E-46 |
| MS.gene052150 | MS.gene78065 | 0.82471 | 6.96E-54 | -1.69E-46 |
| MS.gene052150 | MS.gene79784 | 0.812717 | 3.68E-51 | -1.69E-46 |
| MS.gene052150 | MS.gene79951 | 0.808614 | 2.84E-50 | -1.69E-46 |
| MS.gene052150 | MS.gene80724 | 0.82027 | 7.49E-53 | -1.69E-46 |
| MS.gene052150 | MS.gene84298 | 0.838836 | 2.27E-57 | -1.69E-46 |
| MS.gene052150 | MS.gene84730 | 0.804053 | 2.60E-49 | -1.69E-46 |
| MS.gene052150 | MS.gene85133 | 0.813908 | 2.02E-51 | -1.69E-46 |
| MS.gene052150 | MS.gene92988 | 0.820514 | 6.59E-53 | -1.69E-46 |
| MS.gene052150 | MS.gene96315 | 0.812289 | 4.57E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052150.t1 | MTR_1g017080 | 95.238 | 189 | 4 | 2 | 1 | 188 | 42 | 226 | 3.63e-130 | 370 |
| MS.gene052150.t1 | MTR_5g033720 | 55.882 | 102 | 45 | 0 | 81 | 182 | 72 | 173 | 7.37e-34 | 122 |
| MS.gene052150.t1 | MTR_2g024390 | 51.515 | 99 | 48 | 0 | 81 | 179 | 117 | 215 | 1.14e-28 | 109 |
| MS.gene052150.t1 | MTR_5g085860 | 49.020 | 102 | 48 | 1 | 82 | 179 | 47 | 148 | 4.49e-24 | 96.3 |
| MS.gene052150.t1 | MTR_1g084060 | 46.602 | 103 | 49 | 2 | 81 | 182 | 19 | 116 | 3.75e-23 | 93.2 |
| MS.gene052150.t1 | MTR_1g084060 | 44.118 | 102 | 53 | 1 | 81 | 182 | 19 | 116 | 7.36e-23 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052150.t1 | AT4G08150 | 54.696 | 181 | 63 | 4 | 11 | 187 | 76 | 241 | 2.06e-56 | 183 |
| MS.gene052150.t1 | AT1G23380 | 51.456 | 103 | 50 | 0 | 80 | 182 | 84 | 186 | 1.95e-30 | 113 |
| MS.gene052150.t1 | AT1G62360 | 50.000 | 122 | 59 | 1 | 57 | 176 | 95 | 216 | 1.09e-29 | 112 |
| MS.gene052150.t1 | AT1G23380 | 50.476 | 105 | 50 | 1 | 80 | 182 | 84 | 188 | 1.77e-28 | 108 |
| MS.gene052150.t1 | AT1G70510 | 48.077 | 104 | 54 | 0 | 80 | 183 | 68 | 171 | 2.36e-27 | 105 |
| MS.gene052150.t1 | AT1G70510 | 46.296 | 108 | 54 | 1 | 80 | 183 | 68 | 175 | 3.22e-25 | 99.8 |
Find 38 sgRNAs with CRISPR-Local
Find 63 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAGGATGAGCAATGATTT+TGG | 0.278077 | 1.3:+77158171 | None:intergenic |
| ACCATGAATTGGTCTAGTTC+TGG | 0.338115 | 1.3:+77157733 | None:intergenic |
| ACCAAACGAGCCACCACTTC+CGG | 0.349272 | 1.3:+77157823 | None:intergenic |
| ACCGGAAGTGGTGGCTCGTT+TGG | 0.365361 | 1.3:-77157824 | MS.gene052150:CDS |
| AACTTTCATCTTCAATCAAA+TGG | 0.370332 | 1.3:-77158412 | MS.gene052150:CDS |
| TGAAGATGAAAGTTGTTCAT+TGG | 0.383854 | 1.3:+77158421 | None:intergenic |
| AAATCCATAGCCTCTTGTAT+AGG | 0.443002 | 1.3:+77157464 | None:intergenic |
| ATGATGATTATGCATAATAT+TGG | 0.443654 | 1.3:+77158252 | None:intergenic |
| ATATTTGTTCTCATTAAAGC+TGG | 0.445786 | 1.3:+77158286 | None:intergenic |
| TGTTGATGTTGTACTTGATC+AGG | 0.447416 | 1.3:+77158370 | None:intergenic |
| TCCAGAACTAGACCAATTCA+TGG | 0.475218 | 1.3:-77157734 | MS.gene052150:intron |
| CACTTTGCAATGGACCCCTT+CGG | 0.484187 | 1.3:-77157412 | MS.gene052150:CDS |
| GATTGGAGCTCCACCGGAAG+TGG | 0.502488 | 1.3:-77157836 | MS.gene052150:CDS |
| GGACCCCTTCGGATCTTCCC+TGG | 0.503797 | 1.3:-77157401 | None:intergenic |
| AAGGCCTATACAAGAGGCTA+TGG | 0.514686 | 1.3:-77157468 | MS.gene052150:CDS |
| TGGCTCGTTTGGTTGCGTCT+AGG | 0.518848 | 1.3:-77157813 | MS.gene052150:CDS |
| AGCTTACATGGATTGTCAAA+AGG | 0.519024 | 1.3:-77158131 | MS.gene052150:intron |
| CATCATCATCAAGGAGGAGG+AGG | 0.530576 | 1.3:-77158235 | MS.gene052150:CDS |
| GCTTCACCACTAGAACTGCT+TGG | 0.545490 | 1.3:+77158208 | None:intergenic |
| TATGTAGATTGGAGCTCCAC+CGG | 0.547316 | 1.3:-77157842 | MS.gene052150:intron |
| TATTTGTTCTCATTAAAGCT+GGG | 0.551107 | 1.3:+77158287 | None:intergenic |
| ATGCATAATCATCATCATCA+AGG | 0.555030 | 1.3:-77158244 | MS.gene052150:CDS |
| CAGCTAAATACACTTTGCAA+TGG | 0.562110 | 1.3:-77157422 | MS.gene052150:CDS |
| TGGAGCTCCACCGGAAGTGG+TGG | 0.570424 | 1.3:-77157833 | MS.gene052150:CDS |
| TGTAAAAGACTAGAGTATTG+AGG | 0.573212 | 1.3:+77158154 | None:intergenic |
| GGGAGTCCAAGCAGTTCTAG+TGG | 0.587384 | 1.3:-77158214 | MS.gene052150:CDS |
| AATCATCATCATCAAGGAGG+AGG | 0.600518 | 1.3:-77158238 | MS.gene052150:CDS |
| ACTCACCAGGGAAGATCCGA+AGG | 0.608503 | 1.3:+77157396 | None:intergenic |
| ATCATCATCAAGGAGGAGGA+GGG | 0.622603 | 1.3:-77158234 | MS.gene052150:CDS |
| ATTAACAAGGCCTATACAAG+AGG | 0.622954 | 1.3:-77157474 | MS.gene052150:CDS |
| AAACGAGCCACCACTTCCGG+TGG | 0.627824 | 1.3:+77157826 | None:intergenic |
| CATGCTTGTGAAGTATAGAG+AGG | 0.648293 | 1.3:-77157498 | MS.gene052150:CDS |
| CTCACCAGGGAAGATCCGAA+GGG | 0.678902 | 1.3:+77157397 | None:intergenic |
| CTAGGCAAGAGTTTGAAGCA+AGG | 0.689197 | 1.3:-77157795 | MS.gene052150:CDS |
| CATAATCATCATCATCAAGG+AGG | 0.690149 | 1.3:-77158241 | MS.gene052150:CDS |
| TTATGCATAATATTGGTGTG+TGG | 0.710252 | 1.3:+77158259 | None:intergenic |
| AGTATAGAGAGGAATTAACA+AGG | 0.714149 | 1.3:-77157487 | MS.gene052150:CDS |
| TCACCAGGGAAGATCCGAAG+GGG | 0.724320 | 1.3:+77157398 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATATATATAAAAAAA+TGG | + | chr1.3:77157923-77157942 | None:intergenic | 0.0% |
| !! | AAATATATATATAAAAAAAT+GGG | + | chr1.3:77157922-77157941 | None:intergenic | 0.0% |
| !! | TTTAAACTTAATAATTATCA+TGG | + | chr1.3:77158185-77158204 | None:intergenic | 10.0% |
| !!! | TTTTTAAATTGTTATCATGA+TGG | + | chr1.3:77157892-77157911 | None:intergenic | 15.0% |
| !! | ATGATGATTATGCATAATAT+TGG | + | chr1.3:77157571-77157590 | None:intergenic | 20.0% |
| !! | TAAACAAACTATATGTAGAT+TGG | - | chr1.3:77157967-77157986 | MS.gene052150:intron | 20.0% |
| !! | TTTCAGTCAGAAATTAAATT+TGG | - | chr1.3:77157859-77157878 | MS.gene052150:intron | 20.0% |
| !!! | ATTAGAACTTATAGATTTTG+TGG | - | chr1.3:77158251-77158270 | MS.gene052150:CDS | 20.0% |
| ! | AAATGGTGTTTATGTTTAAC+AGG | - | chr1.3:77158286-77158305 | MS.gene052150:CDS | 25.0% |
| ! | AACTTTCATCTTCAATCAAA+TGG | - | chr1.3:77157408-77157427 | MS.gene052150:CDS | 25.0% |
| ! | ATATTTGTTCTCATTAAAGC+TGG | + | chr1.3:77157537-77157556 | None:intergenic | 25.0% |
| ! | TAAATTGTTATCATGATGGT+GGG | + | chr1.3:77157888-77157907 | None:intergenic | 25.0% |
| ! | TATTTGTTCTCATTAAAGCT+GGG | + | chr1.3:77157536-77157555 | None:intergenic | 25.0% |
| ! | TTAAATTGTTATCATGATGG+TGG | + | chr1.3:77157889-77157908 | None:intergenic | 25.0% |
| ! | TTAATCTCAAATTTAGTGGA+AGG | - | chr1.3:77157802-77157821 | MS.gene052150:CDS | 25.0% |
| ! | TTGGTTAATCTCAAATTTAG+TGG | - | chr1.3:77157798-77157817 | MS.gene052150:CDS | 25.0% |
| AAAGCTGGGTAATGAAAAAT+CGG | + | chr1.3:77157522-77157541 | None:intergenic | 30.0% | |
| AGTATAGAGAGGAATTAACA+AGG | - | chr1.3:77158333-77158352 | MS.gene052150:CDS | 30.0% | |
| ATGCATAATCATCATCATCA+AGG | - | chr1.3:77157576-77157595 | MS.gene052150:intron | 30.0% | |
| TTATGCATAATATTGGTGTG+TGG | + | chr1.3:77157564-77157583 | None:intergenic | 30.0% | |
| ! | TAGTCTTTTACAAGCTTACA+TGG | - | chr1.3:77157677-77157696 | MS.gene052150:intron | 30.0% |
| !! | TGTAAAAGACTAGAGTATTG+AGG | + | chr1.3:77157669-77157688 | None:intergenic | 30.0% |
| !!! | AGGGGGTATATTTTGTTTTA+TGG | - | chr1.3:77158113-77158132 | MS.gene052150:intron | 30.0% |
| AAATCCATAGCCTCTTGTAT+AGG | + | chr1.3:77158359-77158378 | None:intergenic | 35.0% | |
| ATTAACAAGGCCTATACAAG+AGG | - | chr1.3:77158346-77158365 | MS.gene052150:CDS | 35.0% | |
| CAGCTAAATACACTTTGCAA+TGG | - | chr1.3:77158398-77158417 | MS.gene052150:CDS | 35.0% | |
| CATAATCATCATCATCAAGG+AGG | - | chr1.3:77157579-77157598 | MS.gene052150:intron | 35.0% | |
| TAGACCAATTCATGGTACAA+GGG | - | chr1.3:77158094-77158113 | MS.gene052150:intron | 35.0% | |
| TGTTGATGTTGTACTTGATC+AGG | + | chr1.3:77157453-77157472 | None:intergenic | 35.0% | |
| TTCAAGAGAAAAAGAGGGTT+TGG | - | chr1.3:77157779-77157798 | MS.gene052150:CDS | 35.0% | |
| ! | AAACCCTCTTTTTCTCTTGA+AGG | + | chr1.3:77157780-77157799 | None:intergenic | 35.0% |
| ! | AACCCTCTTTTTCTCTTGAA+GGG | + | chr1.3:77157779-77157798 | None:intergenic | 35.0% |
| ! | AGCTTACATGGATTGTCAAA+AGG | - | chr1.3:77157689-77157708 | MS.gene052150:intron | 35.0% |
| ! | TTGAGGATGAGCAATGATTT+TGG | + | chr1.3:77157652-77157671 | None:intergenic | 35.0% |
| !!! | TGTGGTTTTAGACGTTGAAA+TGG | - | chr1.3:77158269-77158288 | MS.gene052150:CDS | 35.0% |
| AATCATCATCATCAAGGAGG+AGG | - | chr1.3:77157582-77157601 | MS.gene052150:intron | 40.0% | |
| AGACCAATTCATGGTACAAG+GGG | - | chr1.3:77158095-77158114 | MS.gene052150:intron | 40.0% | |
| CATGCTTGTGAAGTATAGAG+AGG | - | chr1.3:77158322-77158341 | MS.gene052150:CDS | 40.0% | |
| CTAGACCAATTCATGGTACA+AGG | - | chr1.3:77158093-77158112 | MS.gene052150:intron | 40.0% | |
| TCCAGAACTAGACCAATTCA+TGG | - | chr1.3:77158086-77158105 | MS.gene052150:intron | 40.0% | |
| TGCCCTTCAAGAGAAAAAGA+GGG | - | chr1.3:77157774-77157793 | MS.gene052150:CDS | 40.0% | |
| ! | ACCATGAATTGGTCTAGTTC+TGG | + | chr1.3:77158090-77158109 | None:intergenic | 40.0% |
| ! | TCTTTTTCTCTTGAAGGGCA+GGG | + | chr1.3:77157774-77157793 | None:intergenic | 40.0% |
| ! | TTCGATTTGCACTGTGATGT+CGG | - | chr1.3:77158210-77158229 | MS.gene052150:CDS | 40.0% |
| AAGGCCTATACAAGAGGCTA+TGG | - | chr1.3:77158352-77158371 | MS.gene052150:CDS | 45.0% | |
| ATCATCATCAAGGAGGAGGA+GGG | - | chr1.3:77157586-77157605 | MS.gene052150:intron | 45.0% | |
| CTGCCCTTCAAGAGAAAAAG+AGG | - | chr1.3:77157773-77157792 | MS.gene052150:CDS | 45.0% | |
| GACCAATTCATGGTACAAGG+GGG | - | chr1.3:77158096-77158115 | MS.gene052150:intron | 45.0% | |
| TACCCCCTTGTACCATGAAT+TGG | + | chr1.3:77158101-77158120 | None:intergenic | 45.0% | |
| TATGTAGATTGGAGCTCCAC+CGG | - | chr1.3:77157978-77157997 | MS.gene052150:intron | 45.0% | |
| ! | CTAGGCAAGAGTTTGAAGCA+AGG | - | chr1.3:77158025-77158044 | MS.gene052150:intron | 45.0% |
| ! | CTCTTTTTCTCTTGAAGGGC+AGG | + | chr1.3:77157775-77157794 | None:intergenic | 45.0% |
| !! | AATATATATATAAAAAAATG+GGG | + | chr1.3:77157921-77157940 | None:intergenic | 5.0% |
| CACTTTGCAATGGACCCCTT+CGG | - | chr1.3:77158408-77158427 | MS.gene052150:CDS | 50.0% | |
| CATCATCATCAAGGAGGAGG+AGG | - | chr1.3:77157585-77157604 | MS.gene052150:intron | 50.0% | |
| GCTTCACCACTAGAACTGCT+TGG | + | chr1.3:77157615-77157634 | None:intergenic | 50.0% | |
| ACCAAACGAGCCACCACTTC+CGG | + | chr1.3:77158000-77158019 | None:intergenic | 55.0% | |
| TGGCTCGTTTGGTTGCGTCT+AGG | - | chr1.3:77158007-77158026 | MS.gene052150:intron | 55.0% | |
| ! | GGGAGTCCAAGCAGTTCTAG+TGG | - | chr1.3:77157606-77157625 | MS.gene052150:intron | 55.0% |
| AAACGAGCCACCACTTCCGG+TGG | + | chr1.3:77157997-77158016 | None:intergenic | 60.0% | |
| ACCGGAAGTGGTGGCTCGTT+TGG | - | chr1.3:77157996-77158015 | MS.gene052150:intron | 60.0% | |
| GATTGGAGCTCCACCGGAAG+TGG | - | chr1.3:77157984-77158003 | MS.gene052150:intron | 60.0% | |
| TGGAGCTCCACCGGAAGTGG+TGG | - | chr1.3:77157987-77158006 | MS.gene052150:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 77157402 | 77158440 | 77157402 | ID=MS.gene052150 |
| chr1.3 | mRNA | 77157402 | 77158440 | 77157402 | ID=MS.gene052150.t1;Parent=MS.gene052150 |
| chr1.3 | exon | 77158132 | 77158440 | 77158132 | ID=MS.gene052150.t1.exon1;Parent=MS.gene052150.t1 |
| chr1.3 | CDS | 77158132 | 77158440 | 77158132 | ID=cds.MS.gene052150.t1;Parent=MS.gene052150.t1 |
| chr1.3 | exon | 77157735 | 77157857 | 77157735 | ID=MS.gene052150.t1.exon2;Parent=MS.gene052150.t1 |
| chr1.3 | CDS | 77157735 | 77157857 | 77157735 | ID=cds.MS.gene052150.t1;Parent=MS.gene052150.t1 |
| chr1.3 | exon | 77157402 | 77157534 | 77157402 | ID=MS.gene052150.t1.exon3;Parent=MS.gene052150.t1 |
| chr1.3 | CDS | 77157402 | 77157534 | 77157402 | ID=cds.MS.gene052150.t1;Parent=MS.gene052150.t1 |
| Gene Sequence |
| Protein sequence |
