AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene81409

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81409.t1 MTR_5g094310 94.226 1195 35 4 1 1195 1 1161 0.0 2284
MS.gene81409.t1 MTR_3g055940 60.398 1207 347 22 3 1195 19 1108 0.0 1281
MS.gene81409.t1 MTR_3g084790 37.351 1178 617 31 65 1180 89 1207 0.0 655
MS.gene81409.t1 MTR_8g080910 35.667 1200 610 31 11 1153 9 1103 0.0 607
MS.gene81409.t1 MTR_4g087040 42.204 372 201 6 74 437 193 558 1.58e-81 295
MS.gene81409.t1 MTR_2g087840 36.927 436 243 8 30 442 32 458 1.59e-76 278
MS.gene81409.t1 MTR_4g123730 42.730 337 174 5 108 437 190 514 1.81e-71 263
MS.gene81409.t1 MTR_1g059730 34.758 351 201 7 106 441 57 394 4.40e-52 200
MS.gene81409.t1 MTR_2g096010 32.908 392 224 7 74 441 49 425 8.84e-52 199
MS.gene81409.t1 MTR_7g105030 34.097 349 198 8 106 437 53 386 7.72e-50 192
MS.gene81409.t1 MTR_7g105030 34.097 349 198 8 106 437 53 386 7.72e-50 192
MS.gene81409.t1 MTR_3g102170 32.804 378 202 9 75 416 9 370 2.16e-49 191
MS.gene81409.t1 MTR_3g100270 31.910 398 230 11 70 444 5 384 4.44e-49 191
MS.gene81409.t1 MTR_1g067630 31.785 409 235 10 70 455 50 437 1.82e-48 188
MS.gene81409.t1 MTR_1g484960 32.670 352 215 6 75 421 4 338 3.35e-48 188
MS.gene81409.t1 MTR_7g109130 33.333 393 219 10 70 449 95 457 3.39e-47 181
MS.gene81409.t1 MTR_7g109130 33.333 393 219 10 70 449 174 536 5.04e-47 182
MS.gene81409.t1 MTR_5g066320 33.165 395 218 12 70 438 13 387 6.29e-47 184
MS.gene81409.t1 MTR_4g094882 31.127 408 218 11 74 437 12 400 2.09e-46 182
MS.gene81409.t1 MTR_7g109130 33.333 393 219 10 70 449 396 758 2.49e-46 181
MS.gene81409.t1 MTR_1g018940 29.466 431 252 9 72 470 6 416 3.25e-46 181
MS.gene81409.t1 MTR_3g117330 32.990 388 224 13 63 441 90 450 3.26e-46 181
MS.gene81409.t1 MTR_4g071210 33.428 353 200 12 65 410 83 407 3.68e-46 181
MS.gene81409.t1 MTR_4g071210 33.428 353 200 12 65 410 83 407 4.01e-46 181
MS.gene81409.t1 MTR_2g010760 34.711 363 195 10 64 408 425 763 1.02e-45 178
MS.gene81409.t1 MTR_5g025100 31.429 385 227 9 70 443 885 1243 1.66e-45 180
MS.gene81409.t1 MTR_1g087880 32.581 399 229 10 70 453 392 765 2.78e-44 175
MS.gene81409.t1 MTR_1g017540 32.213 357 213 7 77 421 6 345 3.69e-44 173
MS.gene81409.t1 MTR_7g093720 31.854 383 228 11 66 437 62 422 4.93e-44 174
MS.gene81409.t1 MTR_7g109130 32.576 396 221 11 70 449 396 761 1.04e-43 173
MS.gene81409.t1 MTR_8g072430 31.742 356 205 10 70 413 871 1200 1.37e-43 173
MS.gene81409.t1 MTR_7g112420 33.239 352 195 12 105 449 314 632 8.23e-43 170
MS.gene81409.t1 MTR_5g096570 34.021 388 214 14 69 442 429 788 2.87e-42 169
MS.gene81409.t1 MTR_7g113520 30.290 449 244 15 75 502 128 528 1.24e-41 165
MS.gene81409.t1 MTR_7g112420 32.759 348 196 11 105 449 444 756 3.45e-41 165
MS.gene81409.t1 MTR_5g031470 30.201 447 243 17 74 504 399 792 3.57e-41 165
MS.gene81409.t1 MTR_8g098230 32.308 390 227 10 70 444 479 846 3.93e-41 165
MS.gene81409.t1 MTR_5g049620 29.730 407 234 14 74 467 374 741 4.69e-41 164
MS.gene81409.t1 MTR_2g082570 34.185 313 170 6 109 406 446 737 1.37e-40 162
MS.gene81409.t1 MTR_5g049820 29.730 407 234 14 74 467 374 741 1.56e-40 163
MS.gene81409.t1 MTR_4g081390 35.577 312 166 7 109 406 479 769 1.82e-40 162
MS.gene81409.t1 MTR_2g069950 31.844 358 198 10 74 413 340 669 3.49e-40 162
MS.gene81409.t1 MTR_7g091290 32.979 376 208 12 75 437 393 737 1.10e-39 160
MS.gene81409.t1 MTR_8g098230 31.156 398 229 10 70 444 479 854 2.61e-39 159
MS.gene81409.t1 MTR_3g060900 32.308 390 198 15 70 437 434 779 1.14e-38 157
MS.gene81409.t1 MTR_4g092140 33.425 362 193 13 68 410 326 658 1.60e-38 154
MS.gene81409.t1 MTR_1g082920 33.636 330 179 12 97 418 183 480 5.50e-38 154
MS.gene81409.t1 MTR_5g021650 27.708 397 231 9 75 451 21 381 1.29e-37 154
MS.gene81409.t1 MTR_5g011500 31.348 319 184 8 109 411 103 402 1.84e-37 153
MS.gene81409.t1 MTR_1g083770 31.977 344 200 9 107 441 452 770 2.58e-37 152
MS.gene81409.t1 MTR_1g081800 30.939 362 202 11 69 411 83 415 4.16e-37 149
MS.gene81409.t1 MTR_8g104200 31.510 384 216 13 75 439 516 871 1.32e-34 144
MS.gene81409.t1 MTR_7g075060 29.032 403 224 14 70 438 47 421 4.84e-34 142
MS.gene81409.t1 MTR_8g076190 28.446 341 210 7 109 447 68 376 5.60e-34 142
MS.gene81409.t1 MTR_8g076190 28.446 341 210 7 109 447 68 376 5.87e-34 142
MS.gene81409.t1 MTR_8g076190 27.907 344 215 6 109 447 68 383 1.98e-33 140
MS.gene81409.t1 MTR_2g055910 29.798 396 220 15 75 439 69 437 2.32e-33 138
MS.gene81409.t1 MTR_4g081390 35.379 277 144 8 109 371 481 736 7.93e-33 137
MS.gene81409.t1 MTR_3g113110 27.515 338 215 4 109 446 67 374 1.04e-32 139
MS.gene81409.t1 MTR_4g112350 32.686 309 182 10 104 410 171 455 2.50e-31 132
MS.gene81409.t1 MTR_4g071900 26.448 397 240 9 75 454 25 386 3.09e-31 133
MS.gene81409.t1 MTR_7g091290 29.491 373 184 11 75 437 390 693 3.37e-31 133
MS.gene81409.t1 MTR_6g082470 25.532 423 265 10 63 468 17 406 1.08e-30 131
MS.gene81409.t1 MTR_6g086735 28.732 355 201 10 75 409 116 438 3.89e-30 128
MS.gene81409.t1 MTR_6g086735 28.732 355 201 10 75 409 116 438 4.80e-30 128
MS.gene81409.t1 MTR_8g471180 29.563 389 224 14 69 441 141 495 3.77e-29 127
MS.gene81409.t1 MTR_6g084490 29.262 393 208 13 74 437 477 828 7.18e-29 125
MS.gene81409.t1 MTR_2g436650 27.824 363 207 8 75 409 118 453 7.02e-28 122
MS.gene81409.t1 MTR_2g101990 26.431 367 221 10 64 409 170 508 8.27e-28 121
MS.gene81409.t1 MTR_4g124650 27.331 311 197 5 109 418 188 470 1.26e-27 121
MS.gene81409.t1 MTR_2g436650 27.824 363 207 8 75 409 198 533 1.28e-27 121
MS.gene81409.t1 MTR_7g061020 27.617 449 240 20 63 475 15 414 1.09e-26 117
MS.gene81409.t1 MTR_2g082570 32.231 242 132 5 109 335 446 670 6.70e-26 115
MS.gene81409.t1 MTR_4g119980 26.741 359 214 8 75 409 206 539 1.96e-25 114
MS.gene81409.t1 MTR_3g113630 24.286 280 181 8 111 385 145 398 1.02e-15 83.2
MS.gene81409.t1 MTR_3g113630 24.286 280 181 8 111 385 145 398 1.38e-15 82.8
MS.gene81409.t1 MTR_3g085000 43.421 76 36 1 979 1047 224 299 2.09e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81409.t1 AT3G20150 46.722 1205 494 29 4 1167 12 1109 0.0 899
MS.gene81409.t1 AT3G20150 46.528 1152 468 30 4 1114 12 1056 0.0 875
MS.gene81409.t1 AT3G23670 35.854 1230 650 28 71 1192 93 1291 0.0 687
MS.gene81409.t1 AT5G55520 41.554 811 322 23 414 1194 113 801 6.48e-147 462
MS.gene81409.t1 AT5G55520 41.800 811 316 24 414 1194 113 797 7.85e-147 462
MS.gene81409.t1 AT4G26660 42.379 807 317 29 414 1195 122 805 1.33e-146 462
MS.gene81409.t1 AT3G23670 46.560 436 228 5 71 503 93 526 1.38e-124 408
MS.gene81409.t1 AT3G23670 42.157 306 164 6 896 1192 648 949 1.29e-59 223
MS.gene81409.t1 AT4G14150 46.897 435 227 4 71 503 88 520 4.11e-121 406
MS.gene81409.t1 AT4G14150 32.159 681 374 16 555 1192 635 1270 6.56e-75 273
MS.gene81409.t1 AT3G19050 41.176 374 194 8 72 431 191 552 2.22e-77 282
MS.gene81409.t1 AT3G44050 40.052 382 209 7 72 442 91 463 7.83e-77 278
MS.gene81409.t1 AT3G17360 40.533 375 207 7 72 437 166 533 6.70e-74 271
MS.gene81409.t1 AT3G17360 40.533 375 207 7 72 437 166 533 7.00e-74 271
MS.gene81409.t1 AT3G17360 40.533 375 207 7 72 437 166 533 7.90e-74 271
MS.gene81409.t1 AT3G63480 30.986 355 221 5 75 419 4 344 7.50e-55 199
MS.gene81409.t1 AT3G45850 34.271 391 218 9 75 441 56 431 4.38e-54 206
MS.gene81409.t1 AT3G45850 34.271 391 218 9 75 441 56 431 4.38e-54 206
MS.gene81409.t1 AT2G28620 32.587 402 234 8 63 441 39 426 1.16e-53 205
MS.gene81409.t1 AT2G28620 32.587 402 234 8 63 441 39 426 1.18e-53 205
MS.gene81409.t1 AT2G28620 32.587 402 234 8 63 441 39 426 1.18e-53 205
MS.gene81409.t1 AT3G63480 30.641 359 221 6 75 419 4 348 4.45e-53 194
MS.gene81409.t1 AT2G36200 35.043 351 200 7 106 441 56 393 4.14e-52 200
MS.gene81409.t1 AT5G47820 31.616 427 232 12 64 450 1 407 7.81e-52 199
MS.gene81409.t1 AT5G47820 31.616 427 232 12 64 450 1 407 7.81e-52 199
MS.gene81409.t1 AT2G36200 35.043 351 200 7 106 441 56 393 9.84e-52 199
MS.gene81409.t1 AT5G06670 31.807 393 238 10 61 445 53 423 5.24e-49 187
MS.gene81409.t1 AT5G06670 31.807 393 238 10 61 445 53 423 5.78e-49 190
MS.gene81409.t1 AT5G06670 31.807 393 238 10 61 445 53 423 5.78e-49 190
MS.gene81409.t1 AT5G06670 31.807 393 238 10 61 445 53 423 6.37e-49 187
MS.gene81409.t1 AT5G06670 31.807 393 238 10 61 445 53 423 6.37e-49 187
MS.gene81409.t1 AT5G06670 31.807 393 238 10 61 445 53 423 6.37e-49 187
MS.gene81409.t1 AT5G65930 35.806 310 171 6 107 413 929 1213 5.49e-48 187
MS.gene81409.t1 AT5G65930 35.806 310 171 6 107 413 928 1212 5.53e-48 187
MS.gene81409.t1 AT5G65930 35.806 310 171 6 107 413 935 1219 5.64e-48 187
MS.gene81409.t1 AT3G50240 31.011 445 238 15 75 477 26 443 2.71e-47 184
MS.gene81409.t1 AT3G50240 31.081 444 239 15 75 477 26 443 5.10e-47 184
MS.gene81409.t1 AT3G50240 31.081 444 239 15 75 477 26 443 5.48e-47 184
MS.gene81409.t1 AT2G37420 32.500 360 212 7 106 455 92 430 5.65e-47 184
MS.gene81409.t1 AT2G37420 32.500 360 212 7 106 455 92 430 5.65e-47 184
MS.gene81409.t1 AT1G73860 33.247 388 217 11 75 444 427 790 7.29e-47 183
MS.gene81409.t1 AT3G12020 31.486 397 242 10 56 444 51 425 8.82e-47 183
MS.gene81409.t1 AT3G12020 31.486 397 242 10 56 444 51 425 8.82e-47 183
MS.gene81409.t1 AT5G60930 30.825 412 241 9 69 448 1 400 8.91e-47 184
MS.gene81409.t1 AT1G73860 33.247 388 217 11 75 444 510 873 9.61e-47 183
MS.gene81409.t1 AT5G60930 30.825 412 241 9 69 448 1 400 9.98e-47 184
MS.gene81409.t1 AT5G06670 31.095 402 238 11 61 445 53 432 1.04e-46 182
MS.gene81409.t1 AT5G06670 31.095 402 238 11 61 445 53 432 1.04e-46 182
MS.gene81409.t1 AT5G60930 30.825 412 241 9 69 448 1 400 1.09e-46 184
MS.gene81409.t1 AT4G39050 33.780 373 213 12 74 437 98 445 2.19e-46 182
MS.gene81409.t1 AT3G12020 31.486 397 242 10 56 444 51 425 3.00e-46 181
MS.gene81409.t1 AT3G12020 31.486 397 242 10 56 444 51 425 3.00e-46 181
MS.gene81409.t1 AT3G10180 31.707 410 242 10 75 471 4 388 9.37e-46 181
MS.gene81409.t1 AT3G10180 31.707 410 242 10 75 471 4 388 1.09e-45 180
MS.gene81409.t1 AT2G21380 32.976 373 216 11 74 437 104 451 1.63e-45 179
MS.gene81409.t1 AT2G21380 32.976 373 216 11 74 437 104 451 1.63e-45 179
MS.gene81409.t1 AT1G21730 31.842 380 219 10 75 441 76 428 2.38e-45 178
MS.gene81409.t1 AT1G72250 31.527 406 219 10 75 448 492 870 3.95e-45 178
MS.gene81409.t1 AT1G72250 31.527 406 219 10 75 448 513 891 4.33e-45 178
MS.gene81409.t1 AT1G72250 31.527 406 219 10 75 448 501 879 4.63e-45 178
MS.gene81409.t1 AT1G72250 31.527 406 219 10 75 448 512 890 4.92e-45 178
MS.gene81409.t1 AT5G27000 32.151 423 234 13 75 480 395 781 2.42e-44 175
MS.gene81409.t1 AT1G59540 31.339 351 216 7 77 421 6 337 5.34e-44 173
MS.gene81409.t1 AT1G18410 33.073 384 212 12 75 439 490 847 2.10e-43 172
MS.gene81409.t1 AT1G18410 33.073 384 212 12 75 439 490 847 2.10e-43 172
MS.gene81409.t1 AT1G18410 33.073 384 212 12 75 439 633 990 7.14e-43 171
MS.gene81409.t1 AT2G22610 32.692 364 203 12 107 467 460 784 8.35e-43 171
MS.gene81409.t1 AT2G22610 32.692 364 203 12 107 467 460 784 8.48e-43 171
MS.gene81409.t1 AT2G22610 32.692 364 203 12 107 467 461 785 8.52e-43 171
MS.gene81409.t1 AT1G63640 31.941 407 237 11 75 469 473 851 1.42e-42 170
MS.gene81409.t1 AT5G54670 33.604 369 199 11 64 408 326 672 1.93e-42 167
MS.gene81409.t1 AT2G47500 32.468 385 220 12 74 443 399 758 3.85e-42 168
MS.gene81409.t1 AT2G47500 32.031 384 223 10 74 443 399 758 3.91e-42 168
MS.gene81409.t1 AT5G54670 33.604 369 199 11 64 408 386 732 4.53e-42 166
MS.gene81409.t1 AT5G54670 33.604 369 199 11 64 408 386 732 4.53e-42 166
MS.gene81409.t1 AT1G18410 32.546 381 210 11 75 439 633 982 5.48e-42 168
MS.gene81409.t1 AT3G10310 32.804 378 215 13 75 437 364 717 6.77e-42 167
MS.gene81409.t1 AT1G63640 31.463 410 242 11 75 469 473 858 8.06e-42 167
MS.gene81409.t1 AT1G63640 31.463 410 242 11 75 469 473 858 8.11e-42 167
MS.gene81409.t1 AT1G63640 31.463 410 242 11 75 469 473 858 8.11e-42 167
MS.gene81409.t1 AT3G10310 32.376 383 220 12 70 437 359 717 8.44e-42 167
MS.gene81409.t1 AT1G63640 31.463 410 242 11 75 469 463 848 9.20e-42 167
MS.gene81409.t1 AT4G05190 32.162 370 203 10 64 406 418 766 1.08e-41 166
MS.gene81409.t1 AT4G05190 32.011 378 193 11 64 406 405 753 1.12e-41 165
MS.gene81409.t1 AT5G27950 31.492 362 200 10 69 411 74 406 2.12e-41 162
MS.gene81409.t1 AT4G27180 33.149 362 190 11 74 408 387 723 3.32e-41 164
MS.gene81409.t1 AT4G27180 33.149 362 190 11 74 408 387 723 3.32e-41 164
MS.gene81409.t1 AT4G21270 33.065 372 197 11 64 406 421 769 8.69e-41 163
MS.gene81409.t1 AT1G18410 32.615 371 203 11 75 429 480 819 1.11e-40 164
MS.gene81409.t1 AT5G27550 32.637 383 203 14 75 437 133 480 6.29e-40 160
MS.gene81409.t1 AT5G27550 32.637 383 203 14 75 437 133 480 6.29e-40 160
MS.gene81409.t1 AT3G54870 28.611 360 219 7 109 456 150 483 1.17e-39 160
MS.gene81409.t1 AT3G54870 28.611 360 219 7 109 456 150 483 1.17e-39 160
MS.gene81409.t1 AT3G54870 28.611 360 219 7 109 456 150 483 1.42e-39 160
MS.gene81409.t1 AT3G44730 32.551 341 202 8 109 444 423 740 1.61e-39 160
MS.gene81409.t1 AT3G44730 32.551 341 202 8 109 444 423 740 1.61e-39 160
MS.gene81409.t1 AT5G41310 32.461 382 207 11 74 443 422 764 1.85e-39 159
MS.gene81409.t1 AT3G44730 32.551 341 202 8 109 444 468 785 2.16e-39 160
MS.gene81409.t1 AT3G44730 32.551 341 202 8 109 444 468 785 2.16e-39 160
MS.gene81409.t1 AT1G09170 31.347 386 216 13 74 439 434 790 1.25e-38 157
MS.gene81409.t1 AT1G09170 31.282 390 219 13 70 439 430 790 1.66e-38 156
MS.gene81409.t1 AT1G09170 31.282 390 219 13 70 439 430 790 1.82e-38 156
MS.gene81409.t1 AT1G09170 30.670 388 213 14 70 437 430 781 4.84e-38 154
MS.gene81409.t1 AT1G09170 30.670 388 213 14 70 437 430 781 4.84e-38 154
MS.gene81409.t1 AT1G12430 31.157 337 196 8 109 430 116 431 3.00e-37 152
MS.gene81409.t1 AT1G12430 31.157 337 196 8 109 430 116 431 3.02e-37 152
MS.gene81409.t1 AT1G55550 29.888 358 204 11 69 410 86 412 3.70e-37 152
MS.gene81409.t1 AT1G18550 33.987 306 175 10 107 410 202 482 3.44e-35 145
MS.gene81409.t1 AT1G01950 29.619 341 196 9 109 430 106 421 2.50e-34 143
MS.gene81409.t1 AT1G01950 29.619 341 196 9 109 430 106 421 2.76e-34 143
MS.gene81409.t1 AT3G50240 32.203 295 161 7 149 416 3 285 3.36e-34 142
MS.gene81409.t1 AT1G01950 29.619 341 196 9 109 430 106 421 3.84e-34 142
MS.gene81409.t1 AT3G49650 27.941 340 216 6 106 437 63 381 3.66e-33 139
MS.gene81409.t1 AT5G66310 26.627 338 218 4 109 446 67 374 1.07e-32 138
MS.gene81409.t1 AT5G66310 26.627 338 218 4 109 446 67 374 1.07e-32 138
MS.gene81409.t1 AT5G66310 26.627 338 218 4 109 446 67 374 1.07e-32 138
MS.gene81409.t1 AT1G18370 26.536 407 255 8 75 468 32 407 2.08e-32 137
MS.gene81409.t1 AT1G59540 34.146 246 153 4 176 421 9 245 2.81e-32 135
MS.gene81409.t1 AT3G51150 26.374 364 229 7 89 446 43 373 7.01e-31 132
MS.gene81409.t1 AT3G51150 26.374 364 229 7 89 446 43 373 7.01e-31 132
MS.gene81409.t1 AT3G51150 26.374 364 229 7 89 446 43 373 7.01e-31 132
MS.gene81409.t1 AT3G51150 26.374 364 229 7 89 446 43 373 8.16e-31 132
MS.gene81409.t1 AT5G65460 31.620 389 229 17 69 444 133 497 2.21e-30 131
MS.gene81409.t1 AT2G21300 24.806 387 241 6 75 445 25 377 3.46e-30 129
MS.gene81409.t1 AT2G21300 24.806 387 241 6 75 445 25 377 3.46e-30 129
MS.gene81409.t1 AT2G21300 24.806 387 241 6 75 445 25 377 3.46e-30 129
MS.gene81409.t1 AT2G21300 24.806 387 241 6 75 445 25 377 3.46e-30 129
MS.gene81409.t1 AT2G21300 24.806 387 241 6 75 445 25 377 3.46e-30 129
MS.gene81409.t1 AT4G38950 25.127 394 245 6 68 445 7 366 6.17e-30 129
MS.gene81409.t1 AT4G38950 25.127 394 245 6 68 445 7 366 6.17e-30 129
MS.gene81409.t1 AT4G38950 25.127 394 245 6 68 445 7 366 6.17e-30 129
MS.gene81409.t1 AT4G38950 25.127 394 245 6 68 445 7 366 6.17e-30 129
MS.gene81409.t1 AT4G38950 25.127 394 245 6 68 445 7 366 6.17e-30 129
MS.gene81409.t1 AT5G02370 29.843 382 205 12 60 416 4 347 8.56e-30 126
MS.gene81409.t1 AT1G09170 30.931 333 181 13 70 382 430 733 1.04e-29 127
MS.gene81409.t1 AT1G09170 30.931 333 181 13 70 382 430 733 1.04e-29 127
MS.gene81409.t1 AT5G65460 30.591 389 226 16 69 444 133 490 1.56e-29 128
MS.gene81409.t1 AT5G65460 30.591 389 226 16 69 444 133 490 1.67e-29 128
MS.gene81409.t1 AT5G65460 30.591 389 226 16 69 444 133 490 1.73e-29 128
MS.gene81409.t1 AT3G16060 28.409 352 206 9 75 409 170 492 2.07e-29 126
MS.gene81409.t1 AT1G09170 28.272 382 197 13 74 439 434 754 2.13e-29 127
MS.gene81409.t1 AT5G65460 30.591 389 226 16 69 444 133 490 2.68e-29 127
MS.gene81409.t1 AT3G43210 27.697 343 217 5 108 450 73 384 8.30e-29 125
MS.gene81409.t1 AT3G43210 27.697 343 217 5 108 450 73 384 8.30e-29 125
MS.gene81409.t1 AT3G43210 27.697 343 217 5 108 450 73 384 8.30e-29 125
MS.gene81409.t1 AT3G43210 27.697 343 217 5 108 450 73 384 8.30e-29 125
MS.gene81409.t1 AT3G43210 27.697 343 217 5 108 450 73 384 8.30e-29 125
MS.gene81409.t1 AT4G24170 25.907 386 236 9 75 445 7 357 1.08e-28 125
MS.gene81409.t1 AT4G24170 25.907 386 236 9 75 445 7 357 1.08e-28 125
MS.gene81409.t1 AT5G10470 30.259 347 205 10 69 407 137 454 3.49e-27 120
MS.gene81409.t1 AT5G10470 30.259 347 205 10 69 407 137 454 3.67e-27 120
MS.gene81409.t1 AT3G16630 26.536 358 215 8 75 409 194 526 1.14e-26 118
MS.gene81409.t1 AT3G16630 26.536 358 215 8 75 409 194 526 1.14e-26 118
MS.gene81409.t1 AT1G01950 29.508 305 171 9 145 430 1 280 2.51e-25 114
MS.gene81409.t1 AT5G27950 31.707 246 144 5 176 411 9 240 5.07e-24 107
MS.gene81409.t1 AT3G51150 29.327 208 137 3 240 446 22 220 3.17e-19 94.4
MS.gene81409.t1 AT5G42490 26.378 254 163 4 109 361 56 286 5.53e-18 90.5
MS.gene81409.t1 AT5G42490 26.378 254 163 4 109 361 56 286 5.78e-18 90.5
MS.gene81409.t1 AT4G14330 24.631 406 241 14 28 409 3 367 8.25e-16 83.2
MS.gene81409.t1 AT5G65460 29.921 254 155 9 196 444 9 244 3.39e-14 78.2

Find 244 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTAGAGCTCTTAGAATTTA+AGG 0.089137 5.2:+79567859 None:intergenic
GCATCTGGATTTGGGAATTT+AGG 0.135138 5.2:+79569570 None:intergenic
GGACCTTGTATTCATCTTTC+AGG 0.158904 5.2:+79565496 None:intergenic
CTTCCCCAACAAATCCTTAT+TGG 0.177557 5.2:+79566303 None:intergenic
TCCTCAACTTCATTCTCTTT+TGG 0.203179 5.2:-79566139 MS.gene81409:CDS
TTAGATACATACCTGTTATC+TGG 0.229980 5.2:+79567247 None:intergenic
CATCTGGATTTGGGAATTTA+GGG 0.233253 5.2:+79569571 None:intergenic
CTTCAGGTGGAGAAACTTAA+AGG 0.235229 5.2:-79565600 MS.gene81409:intron
CTGCTGAGCTTTCTGCATTA+AGG 0.238086 5.2:-79564772 MS.gene81409:CDS
TCAAGAGGTGTAGTTGAAAT+TGG 0.239886 5.2:+79569456 None:intergenic
CGGCAGCAAAGGCTGGAAAA+AGG 0.260623 5.2:-79564823 MS.gene81409:CDS
TCTTCCCCGCCATCATTATT+AGG 0.262071 5.2:+79565130 None:intergenic
CAGGTATACAATGGACAAAT+TGG 0.262245 5.2:-79568243 MS.gene81409:CDS
CAAGGGTTTGGAGAGTATTC+TGG 0.263678 5.2:-79565835 MS.gene81409:intron
CTTGAGTAGTTCTTCCTTCT+CGG 0.274077 5.2:+79565279 None:intergenic
AGAAGCAAAATTCTTGAAAA+AGG 0.280396 5.2:-79564735 MS.gene81409:CDS
CAGGCATGGAGAGCTGAATT+TGG 0.283559 5.2:-79564291 MS.gene81409:CDS
TCCTTTATTTCATTGATAAC+AGG 0.287880 5.2:+79567062 None:intergenic
CTAAACTCCATCGGCGAGTA+TGG 0.303071 5.2:-79565567 MS.gene81409:CDS
AGAGAATTCAAGTTCCAATA+AGG 0.322310 5.2:-79566317 MS.gene81409:CDS
TTCTTTGAGTTAGTTCTTCC+CGG 0.327258 5.2:+79565320 None:intergenic
TCTTGGAAGTTCAAACAAAT+TGG 0.327323 5.2:-79566344 MS.gene81409:CDS
TGCTGAGCTTTCTGCATTAA+GGG 0.333425 5.2:-79564771 MS.gene81409:CDS
AGTCACACAAATTCTGATTA+AGG 0.338149 5.2:-79568003 MS.gene81409:intron
GCGCAGGCAGACATTGTCTA+AGG 0.338235 5.2:-79567570 MS.gene81409:CDS
GGAACATATTACTGAGAGTT+TGG 0.343353 5.2:+79567276 None:intergenic
CAAGCTCAGAAAACAACATT+TGG 0.345999 5.2:+79568515 None:intergenic
CTTCTGATACATTGTGTGTT+GGG 0.347847 5.2:-79569125 MS.gene81409:CDS
TCAGTCAGTTGGTGTTCCTT+TGG 0.354949 5.2:-79568800 MS.gene81409:CDS
CAAGAGGTGTAGTTGAAATT+GGG 0.355574 5.2:+79569457 None:intergenic
CAACATCAATAAGGCTAATT+CGG 0.356605 5.2:+79567620 None:intergenic
CCAAGAAAAGTATAACGATT+TGG 0.358597 5.2:-79564894 MS.gene81409:CDS
ATCTCTAAATGAAGATCTAA+TGG 0.363176 5.2:+79566483 None:intergenic
TTTCAGTCAGCTCATCTATT+CGG 0.370452 5.2:-79566456 MS.gene81409:CDS
ATTAGCCTTATTGATGTTGC+TGG 0.372348 5.2:-79567616 MS.gene81409:CDS
AACACTTCAATTCTATCATA+TGG 0.373878 5.2:-79568754 MS.gene81409:CDS
GCCTGTTATCAATGAAATAA+AGG 0.373983 5.2:-79567063 MS.gene81409:CDS
TGTGAATGAGGAGGACATAA+AGG 0.374740 5.2:-79566725 MS.gene81409:CDS
ACACTGCGCACACTCAGATT+TGG 0.375356 5.2:-79567113 MS.gene81409:CDS
TATAAAACTCATCAATTTGC+TGG 0.376164 5.2:+79566695 None:intergenic
CAATGGAATATTTCTTCTGT+TGG 0.376279 5.2:+79566080 None:intergenic
TGCTTACCTCAAGGTTCCGC+TGG 0.380162 5.2:+79568202 None:intergenic
GTTAAACAAGAGTTTCTGTT+TGG 0.380622 5.2:+79567331 None:intergenic
CTCCGCAAGGTACTGCTTCA+TGG 0.381050 5.2:+79564407 None:intergenic
ATACCTGTTATCTGGGTAGA+TGG 0.382020 5.2:+79567255 None:intergenic
AGTTCCAATAAGGATTTGTT+GGG 0.382899 5.2:-79566307 MS.gene81409:CDS
GCCTTATCCGTCAGTCCATC+TGG 0.392728 5.2:+79565941 None:intergenic
CTTCCTCAACAGAATAATAC+TGG 0.393055 5.2:+79566623 None:intergenic
GGGTTGGGAGTGTGATTGTT+TGG 0.394207 5.2:+79569479 None:intergenic
CTTGCCCAGCAACATCAATA+AGG 0.397155 5.2:+79567611 None:intergenic
AGGTATACAATGGACAAATT+GGG 0.399826 5.2:-79568242 MS.gene81409:CDS
AAGAGAGAGATGGACAGAAA+TGG 0.401461 5.2:-79565095 MS.gene81409:CDS
ATCTCGAGGCCAACCGGCAC+AGG 0.403469 5.2:-79565033 MS.gene81409:CDS
AAGCTCAGCAGCGAGCGATT+TGG 0.408329 5.2:+79564784 None:intergenic
TTATCTGTAATCCCCTCTTA+AGG 0.411367 5.2:+79566197 None:intergenic
GGGTTGATCTGAATGATGTT+GGG 0.412974 5.2:+79569525 None:intergenic
CAGGATTCCAATGAGGTTCC+AGG 0.414953 5.2:-79566004 MS.gene81409:CDS
CCGCAAAATAATAACTGATC+AGG 0.418006 5.2:-79566023 MS.gene81409:CDS
AATGGCCCTTGAGGTGTTGT+TGG 0.418097 5.2:+79566501 None:intergenic
CGAGTGATTCATGTAGTAAA+CGG 0.419555 5.2:+79567308 None:intergenic
ACAATTCCTTTGTGACTTTG+AGG 0.419935 5.2:+79568550 None:intergenic
AATGTGAAATTAAAGAAGTC+CGG 0.420235 5.2:-79565339 MS.gene81409:CDS
CCTTGGCAGCAAGCCTTAAG+AGG 0.421259 5.2:-79566210 MS.gene81409:CDS
GTTCCATCTACCCAGATAAC+AGG 0.422738 5.2:-79567258 MS.gene81409:intron
AGCTCAGATGGGAGTAGAAA+TGG 0.422930 5.2:-79566859 MS.gene81409:CDS
AGGGTTGATCTGAATGATGT+TGG 0.422979 5.2:+79569524 None:intergenic
TCCATCTGGATTTCCTGCTT+CGG 0.426137 5.2:+79565955 None:intergenic
AATCGATGAACTAAATCAAT+TGG 0.427015 5.2:-79565694 MS.gene81409:intron
GCACTGAAAAGATCAGTTCT+TGG 0.428468 5.2:-79564950 MS.gene81409:CDS
GACCTTGTATTCATCTTTCA+GGG 0.431284 5.2:+79565497 None:intergenic
TGTAGCAGTTCTTTCATCAA+TGG 0.431936 5.2:+79566063 None:intergenic
CCTACCGCTAACATTGGAAT+AGG 0.435538 5.2:-79569171 MS.gene81409:CDS
CTCTTGGAAGAGAATGATCT+AGG 0.435728 5.2:+79569609 None:intergenic
AAAAGAAATCACGAGAGAAA+AGG 0.437969 5.2:-79565751 MS.gene81409:CDS
CTGAATGATGTTGGGGTCTG+TGG 0.439830 5.2:+79569533 None:intergenic
CCTTTGTGACTTTGAGGTGA+GGG 0.440615 5.2:+79568556 None:intergenic
TGTGATTGAGTCTTGGTGTA+AGG 0.441362 5.2:-79567816 MS.gene81409:intron
CCTCTTAAGGCTTGCTGCCA+AGG 0.443189 5.2:+79566210 None:intergenic
CAGGGCAGAGAGGGTTGAGC+AGG 0.443329 5.2:-79565014 MS.gene81409:CDS
GCAGAAGCTGTTCATGCAGC+TGG 0.444082 5.2:-79564677 MS.gene81409:CDS
TTGGTTAGAAATGCTTTAGC+TGG 0.445615 5.2:-79568781 MS.gene81409:CDS
CAAGACAGGAACAAAGTTGA+TGG 0.449066 5.2:-79567592 MS.gene81409:CDS
GGCTCCTCAAACATGGCACT+TGG 0.449291 5.2:+79568577 None:intergenic
TCCAGGTCCGACTGAGTCCT+TGG 0.449668 5.2:-79566227 MS.gene81409:CDS
CAATACAACTCCTCACAATC+AGG 0.450057 5.2:-79564322 MS.gene81409:CDS
GCTCCTCAAACATGGCACTT+GGG 0.451062 5.2:+79568578 None:intergenic
AAGAAGGCGGCAGCAAAGGC+TGG 0.452669 5.2:-79564830 MS.gene81409:CDS
CTCCTCAAACATGGCACTTG+GGG 0.454141 5.2:+79568579 None:intergenic
TCACTGACAGATATATCAAT+AGG 0.455100 5.2:+79566655 None:intergenic
TCCAAGACAACTAGATGAAA+AGG 0.460671 5.2:+79566360 None:intergenic
TCTTCTGATACATTGTGTGT+TGG 0.461392 5.2:-79569126 MS.gene81409:CDS
TCACAATCAGGATGATGATC+AGG 0.461838 5.2:-79564310 MS.gene81409:CDS
AGGAGATGAAACTGTTAAGA+AGG 0.462391 5.2:-79569151 MS.gene81409:CDS
TTGATGTTGCTGGGCAAGAC+AGG 0.462588 5.2:-79567606 MS.gene81409:CDS
ACCTCAAGGTTCCGCTGGGT+TGG 0.463123 5.2:+79568207 None:intergenic
CAACCCTCTCTGCCCTGTGC+CGG 0.465079 5.2:+79565020 None:intergenic
GTATCATTATCATCAATGTT+AGG 0.465704 5.2:+79566763 None:intergenic
AAGTTCCAATAAGGATTTGT+TGG 0.466588 5.2:-79566308 MS.gene81409:CDS
AGAAATCCTTATCACAGCTT+GGG 0.470181 5.2:-79567531 MS.gene81409:intron
TCCTTACCCAAGCTGTGATA+AGG 0.472448 5.2:+79567525 None:intergenic
GAGTTGATCTCGAGGCCAAC+CGG 0.474654 5.2:-79565039 MS.gene81409:CDS
AGCTGACCCTCAAATTATTG+AGG 0.477307 5.2:+79566806 None:intergenic
GCCAAGGACTCAGTCGGACC+TGG 0.477579 5.2:+79566226 None:intergenic
CAAGTCTCAAGATTCAACTT+AGG 0.479794 5.2:-79564706 MS.gene81409:CDS
ATCTCCTATTCCAATGTTAG+CGG 0.480535 5.2:+79569167 None:intergenic
TTCACTAAAGAACCTCGCTT+GGG 0.481693 5.2:-79567367 MS.gene81409:CDS
AAAGCTACCTGGAACCTCAT+TGG 0.481727 5.2:+79565997 None:intergenic
AAGAAATCCTTATCACAGCT+TGG 0.481825 5.2:-79567532 MS.gene81409:CDS
AAAAGAAATCACGAGAGAAA+AGG 0.483651 5.2:-79565811 MS.gene81409:CDS
TTGCAGGGAACCTCAACAAA+TGG 0.489508 5.2:-79567664 MS.gene81409:intron
CCTCTCTGCCCTGTGCCGGT+TGG 0.491184 5.2:+79565024 None:intergenic
AAGTCTCAAGATTCAACTTA+GGG 0.491530 5.2:-79564705 MS.gene81409:CDS
TGGCATAGCCGAGGTGAAGA+AGG 0.492448 5.2:-79564846 MS.gene81409:CDS
AAGAGAATGATCTAGGAAGA+AGG 0.494293 5.2:+79569616 None:intergenic
TTTCTCCTAATAATGATGGC+GGG 0.496265 5.2:-79565135 MS.gene81409:CDS
TGCATTGACACAGCCGAAGC+AGG 0.496274 5.2:-79565968 MS.gene81409:CDS
TTTCACTAAAGAACCTCGCT+TGG 0.499237 5.2:-79567368 MS.gene81409:CDS
TCCAGATGGACTGACGGATA+AGG 0.500737 5.2:-79565942 MS.gene81409:CDS
TTCTGATACATTGTGTGTTG+GGG 0.503916 5.2:-79569124 MS.gene81409:CDS
TAGATACATACCTGTTATCT+GGG 0.507310 5.2:+79567248 None:intergenic
TCCTTTGTGACTTTGAGGTG+AGG 0.511218 5.2:+79568555 None:intergenic
TGAATGATGTTGGGGTCTGT+GGG 0.511553 5.2:+79569534 None:intergenic
CTCCCTGAAAGATGAATACA+AGG 0.511601 5.2:-79565499 MS.gene81409:intron
GAGTGATTCATGTAGTAAAC+GGG 0.514477 5.2:+79567309 None:intergenic
TTCTGCATTAAGGGTGGAGA+GGG 0.514585 5.2:-79564762 MS.gene81409:CDS
AGTTCTTGGACATGCTAGAA+TGG 0.516757 5.2:-79564936 MS.gene81409:CDS
TGTGGTTCCTCAAGAAGCAT+TGG 0.519275 5.2:+79566430 None:intergenic
GGTGAAGAAGGCGGCAGCAA+AGG 0.521371 5.2:-79564834 MS.gene81409:CDS
GGTCTCTCTAGCAGAAAAGT+TGG 0.522771 5.2:-79567890 MS.gene81409:CDS
TTAGCCTTATTGATGTTGCT+GGG 0.524448 5.2:-79567615 MS.gene81409:CDS
CAACCGGCACAGGGCAGAGA+GGG 0.524555 5.2:-79565023 MS.gene81409:CDS
TTCAACTACACCTCTTGACT+CGG 0.528460 5.2:-79569451 MS.gene81409:CDS
CGAAAGCCTCAATAATTTGA+GGG 0.533616 5.2:-79566812 MS.gene81409:CDS
ATGTGAAATTAAAGAAGTCC+GGG 0.535816 5.2:-79565338 MS.gene81409:CDS
TGCTGCCGCCTTCTTCACCT+CGG 0.536431 5.2:+79564838 None:intergenic
AAGAGGTGTAGTTGAAATTG+GGG 0.538887 5.2:+79569458 None:intergenic
TGATCAAATCCGACAGCTGA+AGG 0.539792 5.2:-79567018 MS.gene81409:intron
TTCAATTCTATCATATGGCC+AGG 0.540320 5.2:-79568749 MS.gene81409:intron
CAGTGCATCATCTAACTCCT+CGG 0.541430 5.2:+79564967 None:intergenic
GCTGATGTTCGAAGCTCAGA+TGG 0.541850 5.2:-79566871 MS.gene81409:CDS
TCTTTGTGCTAGTCTGGAAG+TGG 0.543075 5.2:-79568625 MS.gene81409:intron
AGCTGTTTCAATGCAGACTC+TGG 0.544086 5.2:+79564375 None:intergenic
GTGGTGCTTACTTTCACTGA+AGG 0.545402 5.2:+79569426 None:intergenic
AGAACTGCTACATTGCTTTG+TGG 0.547690 5.2:-79566052 MS.gene81409:CDS
TTGCAAGGACCAAGCAGCTA+AGG 0.550972 5.2:-79565775 MS.gene81409:CDS
GTAGTTTACCTGACTTGTGT+TGG 0.552675 5.2:+79569068 None:intergenic
TTCTTCTAAATCACAGTCTG+AGG 0.553042 5.2:+79565363 None:intergenic
TGGAAGTTCAAACAAATTGG+CGG 0.553958 5.2:-79566341 MS.gene81409:CDS
ATTAGACCTACCGCTAACAT+TGG 0.558228 5.2:-79569177 MS.gene81409:CDS
TTTGGAGACTCAGTAAGTTG+TGG 0.558819 5.2:+79566412 None:intergenic
GCAGGCTGAACATGCTGAAG+AGG 0.561583 5.2:-79565529 MS.gene81409:CDS
TTCTCCTAATAATGATGGCG+GGG 0.563127 5.2:-79565134 MS.gene81409:CDS
CTTGGCAGCAAGCCTTAAGA+GGG 0.563175 5.2:-79566209 MS.gene81409:CDS
ATGCATGACTTAAAGCTACC+TGG 0.564648 5.2:+79565986 None:intergenic
CAGTATTATTCTGTTGAGGA+AGG 0.568990 5.2:-79566622 MS.gene81409:CDS
GTTGTTGGCTGATGCATACA+AGG 0.570065 5.2:+79566516 None:intergenic
CTCTTTCGATGCTACCGAGA+AGG 0.570104 5.2:-79565293 MS.gene81409:CDS
ATACATTGTGTGTTGGGGAT+AGG 0.570372 5.2:-79569119 MS.gene81409:CDS
ACTCAAAAGAAAGCACAAGA+TGG 0.570677 5.2:-79564439 MS.gene81409:CDS
TGGAAAGACATATACAATGT+GGG 0.571383 5.2:-79568605 MS.gene81409:CDS
GCGAAAGCCTCAATAATTTG+AGG 0.572608 5.2:-79566813 MS.gene81409:CDS
TGTCCAGTATTATTCTGTTG+AGG 0.573010 5.2:-79566626 MS.gene81409:CDS
CGAGAAGGAAGAACTACTCA+AGG 0.573212 5.2:-79565278 MS.gene81409:CDS
TTTCGCGTACATTCTGTACA+TGG 0.573400 5.2:+79566830 None:intergenic
AACAGTTCAATTATCAGTGT+CGG 0.579060 5.2:-79568374 MS.gene81409:CDS
AGGAACAAAGTTGATGGCGC+AGG 0.581992 5.2:-79567586 MS.gene81409:CDS
GGACAGAAATGGAAAGTGAG+TGG 0.582397 5.2:-79565084 MS.gene81409:CDS
ATTTCATTGACGTAGGCACT+TGG 0.582884 5.2:-79567398 MS.gene81409:intron
TGAAGATCTAATGGCCCTTG+AGG 0.583728 5.2:+79566492 None:intergenic
GCTTACCTCAAGGTTCCGCT+GGG 0.584153 5.2:+79568203 None:intergenic
CAGTCTGAGGAAGTGCTCCT+CGG 0.584197 5.2:+79565376 None:intergenic
ATCAGGATGATGATCAGGCA+TGG 0.584764 5.2:-79564305 MS.gene81409:CDS
GCTAAAGCATTTCTAACCAA+AGG 0.584994 5.2:+79568784 None:intergenic
TGAAGATCTCAGTTTGTCAG+TGG 0.585633 5.2:+79565198 None:intergenic
GGAAGAACTTATTAGAGCAA+AGG 0.585650 5.2:-79566893 MS.gene81409:CDS
GGAGCTTGAGAATGTTTGCA+AGG 0.586349 5.2:-79565730 MS.gene81409:CDS
GGAGCTTGAGAATGTTTGCA+AGG 0.586349 5.2:-79565790 MS.gene81409:CDS
TAGGAGCAGGGTATGTCTGA+GGG 0.588205 5.2:-79568399 MS.gene81409:CDS
TCTCGAGGCCAACCGGCACA+GGG 0.590172 5.2:-79565032 MS.gene81409:CDS
TGTTTGAAACAGGTATACAA+TGG 0.590632 5.2:-79568252 MS.gene81409:intron
CATCAGCCAACAACACCTCA+AGG 0.591173 5.2:-79566507 MS.gene81409:CDS
TGAAGATGTGAATGTGAATG+AGG 0.591949 5.2:-79566737 MS.gene81409:CDS
CCCAAAAGAGAATGAAGTTG+AGG 0.592536 5.2:+79566138 None:intergenic
GGTATACAATGGACAAATTG+GGG 0.593381 5.2:-79568241 MS.gene81409:CDS
GTTGGGGAAGTCATTTACAA+AGG 0.595090 5.2:-79566290 MS.gene81409:CDS
GTGGAAAGACATATACAATG+TGG 0.595141 5.2:-79568606 MS.gene81409:CDS
TGGTGCTTACTTTCACTGAA+GGG 0.597567 5.2:+79569427 None:intergenic
AGGTGAGGGCTCCTCAAACA+TGG 0.598594 5.2:+79568570 None:intergenic
CTGGTAATTTGCTCTCCGCA+AGG 0.599016 5.2:+79564394 None:intergenic
ATTGAGCAAGCTTTGTCATG+AGG 0.599540 5.2:-79566560 MS.gene81409:CDS
ATGATGTTGGGGTCTGTGGG+AGG 0.602167 5.2:+79569537 None:intergenic
TCCTCAAACATGGCACTTGG+GGG 0.602570 5.2:+79568580 None:intergenic
CGCAGGCAGACATTGTCTAA+GGG 0.604189 5.2:-79567569 MS.gene81409:CDS
CTTGCTGCCAAGGACTCAGT+CGG 0.606506 5.2:+79566220 None:intergenic
AACATTGCTTGATCTTAGTG+AGG 0.607506 5.2:+79566252 None:intergenic
GCCGAAGCAGGAAATCCAGA+TGG 0.608712 5.2:-79565956 MS.gene81409:CDS
AAACACAATGCTATAATGCA+TGG 0.609772 5.2:-79564866 MS.gene81409:CDS
GGATAAATATATTAGGAGCA+GGG 0.614079 5.2:-79568411 MS.gene81409:intron
CCAACCGGCACAGGGCAGAG+AGG 0.614093 5.2:-79565024 MS.gene81409:CDS
TTCCTCACTCAGATTCTCCA+AGG 0.615861 5.2:+79568046 None:intergenic
TTAGGAGCAGGGTATGTCTG+AGG 0.616325 5.2:-79568400 MS.gene81409:intron
GGTTGATCTGAATGATGTTG+GGG 0.618505 5.2:+79569526 None:intergenic
TGAACAATACCTTCAGCTGT+CGG 0.621388 5.2:+79567009 None:intergenic
AGAGGGTTGAGCAGGAACTG+AGG 0.623084 5.2:-79565006 MS.gene81409:CDS
CTGATGTTCGAAGCTCAGAT+GGG 0.624043 5.2:-79566870 MS.gene81409:CDS
CCTATTCCAATGTTAGCGGT+AGG 0.625055 5.2:+79569171 None:intergenic
GATAGATGATGTAGAAGACA+TGG 0.630577 5.2:+79569644 None:intergenic
ATTGAAACAGCTATATAGAG+AGG 0.630677 5.2:-79564364 MS.gene81409:CDS
TCGGTCTCCAATGCTTCTTG+AGG 0.631094 5.2:-79566437 MS.gene81409:CDS
GTCACAAAGGAATTGTACCT+CGG 0.633667 5.2:-79568543 MS.gene81409:CDS
TAGAGAAAGAAAGAGAGAGA+TGG 0.637643 5.2:-79565105 MS.gene81409:CDS
AGGAAATCCAGATGGACTGA+CGG 0.639471 5.2:-79565948 MS.gene81409:CDS
CGTTTACTACATGAATCACT+CGG 0.640794 5.2:-79567307 MS.gene81409:CDS
CCCTCACCTCAAAGTCACAA+AGG 0.640798 5.2:-79568556 MS.gene81409:CDS
ACTACTGAAACCATTTGTTG+AGG 0.642628 5.2:+79567654 None:intergenic
TTTCTGCATTAAGGGTGGAG+AGG 0.644275 5.2:-79564763 MS.gene81409:CDS
ACATGCAGCTTCTGTTGCAG+AGG 0.645024 5.2:-79564624 MS.gene81409:intron
GGAAAGACATATACAATGTG+GGG 0.645822 5.2:-79568604 MS.gene81409:CDS
TACCATGAAGCAGTACCTTG+CGG 0.647637 5.2:-79564409 MS.gene81409:CDS
AGATAATTGATTCTCATCAG+AGG 0.649750 5.2:-79566180 MS.gene81409:CDS
ACTGAAGGGTCCGAGTCAAG+AGG 0.650596 5.2:+79569441 None:intergenic
ATATAGAGAGGATTCTGATG+TGG 0.653131 5.2:-79564352 MS.gene81409:CDS
ATCAGCCAACAACACCTCAA+GGG 0.654032 5.2:-79566506 MS.gene81409:CDS
AACAACATTTGGAAGATCCG+AGG 0.654788 5.2:+79568526 None:intergenic
AACTGATCAGGATTCCAATG+AGG 0.656850 5.2:-79566011 MS.gene81409:CDS
GTTCCAATAAGGATTTGTTG+GGG 0.658522 5.2:-79566306 MS.gene81409:CDS
CATAGCCGAGGTGAAGAAGG+CGG 0.660734 5.2:-79564843 MS.gene81409:CDS
TGTTATCAATGAAATAAAGG+AGG 0.661524 5.2:-79567060 MS.gene81409:CDS
GTCCTTGGAGAATCTGAGTG+AGG 0.662004 5.2:-79568048 MS.gene81409:CDS
TCCAACCCAGCGGAACCTTG+AGG 0.665689 5.2:-79568208 MS.gene81409:intron
TGAGCTTTCTGCATTAAGGG+TGG 0.666270 5.2:-79564768 MS.gene81409:CDS
AGAGGTGTAGTTGAAATTGG+GGG 0.671050 5.2:+79569459 None:intergenic
TGATCATCATCCTGATTGTG+AGG 0.676878 5.2:+79564312 None:intergenic
AGGAGCAGGGTATGTCTGAG+GGG 0.690055 5.2:-79568398 MS.gene81409:CDS
GAATTTACAGAGGAAGAGTG+TGG 0.690087 5.2:-79566383 MS.gene81409:CDS
TATAATGCATGGCATAGCCG+AGG 0.698012 5.2:-79564855 MS.gene81409:CDS
TTGGCAGCAAGCCTTAAGAG+GGG 0.700632 5.2:-79566208 MS.gene81409:CDS
GCTTTGTCATGAGGACAGTG+TGG 0.712962 5.2:-79566551 MS.gene81409:CDS
TGTTAGGTATGAGTAGAGAG+CGG 0.713488 5.2:+79566779 None:intergenic
TGAACTAAGAGTTGATCTCG+AGG 0.713984 5.2:-79565047 MS.gene81409:CDS
AGATGTGAATGTGAATGAGG+AGG 0.720665 5.2:-79566734 MS.gene81409:CDS
TTACTACATGAATCACTCGG+TGG 0.726889 5.2:-79567304 MS.gene81409:CDS
GTTAGAGAAGATGTGCACCG+AGG 0.729488 5.2:-79564984 MS.gene81409:CDS
ATTTACTTGATCCAACCCAG+CGG 0.791866 5.2:-79568218 MS.gene81409:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACATAAAAGTAAATTATA+AGG + chr5.2:79568502-79568521 None:intergenic 10.0%
!! AACATAAAAGTAAATTATAA+GGG + chr5.2:79568501-79568520 None:intergenic 10.0%
!! AAAATGTTTCTTATATTTGA+TGG - chr5.2:79565228-79565247 MS.gene81409:CDS 15.0%
!! TATACATTATTTATGTCATT+AGG + chr5.2:79566717-79566736 None:intergenic 15.0%
!! TCAATGGAAATAATTTATAA+AGG - chr5.2:79566933-79566952 MS.gene81409:intron 15.0%
!!! AAATGAATTTTTTTGAAAAG+TGG + chr5.2:79564504-79564523 None:intergenic 15.0%
!!! ACTATTTTTTTTCTTTTTCA+AGG - chr5.2:79568055-79568074 MS.gene81409:CDS 15.0%
!!! CTATTTTTTTTCTTTTTCAA+GGG - chr5.2:79568056-79568075 MS.gene81409:CDS 15.0%
!!! TCAAAGATTTAAAGTTTAAA+TGG + chr5.2:79568472-79568491 None:intergenic 15.0%
!!! TTATGAAATTTCTAAAAATG+TGG - chr5.2:79565580-79565599 MS.gene81409:CDS 15.0%
!! AAAATTAATCAAGCAATGAA+TGG + chr5.2:79566411-79566430 None:intergenic 20.0%
!! AAATTATTTCCATTGAAGTT+AGG + chr5.2:79566929-79566948 None:intergenic 20.0%
!! AATTATTTCCATTGAAGTTA+GGG + chr5.2:79566928-79566947 None:intergenic 20.0%
!! TTGTAACTCAAAAATAAGAT+GGG + chr5.2:79569316-79569335 None:intergenic 20.0%
!! TTTGTAACTCAAAAATAAGA+TGG + chr5.2:79569317-79569336 None:intergenic 20.0%
!!! ATTAAGTCAATACATACTTT+TGG + chr5.2:79567994-79568013 None:intergenic 20.0%
!!! GATGTTTGAAATTAATATCT+TGG - chr5.2:79566451-79566470 MS.gene81409:CDS 20.0%
!!! GTTTTTCGGATAAATATATT+AGG - chr5.2:79565490-79565509 MS.gene81409:intron 20.0%
!!! TCTAATTTTGCTCAAAATAT+GGG - chr5.2:79564610-79564629 MS.gene81409:intron 20.0%
!!! TTCTAATTTTGCTCAAAATA+TGG - chr5.2:79564609-79564628 MS.gene81409:intron 20.0%
!!! TTTTAGTTTTGACTGTTTTT+CGG - chr5.2:79565476-79565495 MS.gene81409:intron 20.0%
! AACACTTCAATTCTATCATA+TGG - chr5.2:79565154-79565173 MS.gene81409:CDS 25.0%
! AATCCTATGATAGAAAACTA+TGG + chr5.2:79564905-79564924 None:intergenic 25.0%
! AATCGATGAACTAAATCAAT+TGG - chr5.2:79568214-79568233 MS.gene81409:CDS 25.0%
! AATGTGAAATTAAAGAAGTC+CGG - chr5.2:79568569-79568588 MS.gene81409:CDS 25.0%
! ACTTCACTGTTAACTATTTA+TGG - chr5.2:79564866-79564885 MS.gene81409:CDS 25.0%
! AGAAGCAAAATTCTTGAAAA+AGG - chr5.2:79569173-79569192 MS.gene81409:CDS 25.0%
! ATCTCTAAATGAAGATCTAA+TGG + chr5.2:79567428-79567447 None:intergenic 25.0%
! CAAGCATTAGAAATTTAAGT+AGG + chr5.2:79565437-79565456 None:intergenic 25.0%
! CAATTTATTTGAATTCCTTC+AGG - chr5.2:79568292-79568311 MS.gene81409:intron 25.0%
! CTACTTAAATTTCTAATGCT+TGG - chr5.2:79565435-79565454 MS.gene81409:intron 25.0%
! CTGTTTAACATGATTCTTTA+TGG - chr5.2:79566131-79566150 MS.gene81409:CDS 25.0%
! GTATCATTATCATCAATGTT+AGG + chr5.2:79567148-79567167 None:intergenic 25.0%
! TAATGTTTGAACTCAGAAAT+GGG - chr5.2:79564553-79564572 MS.gene81409:intron 25.0%
! TATAAAACTCATCAATTTGC+TGG + chr5.2:79567216-79567235 None:intergenic 25.0%
! TGTTATCAATGAAATAAAGG+AGG - chr5.2:79566848-79566867 MS.gene81409:CDS 25.0%
! TTAATGTTTGAACTCAGAAA+TGG - chr5.2:79564552-79564571 MS.gene81409:intron 25.0%
! TTTAGATTTGAACTTGAAAC+AGG - chr5.2:79564697-79564716 MS.gene81409:CDS 25.0%
! TTTCTGAGTTCAAACATTAA+AGG + chr5.2:79564552-79564571 None:intergenic 25.0%
!! ATTGTTTCAACCTTTTAGTA+GGG - chr5.2:79565202-79565221 MS.gene81409:CDS 25.0%
!! CATAATTAAGTTGTAAGAGA+AGG - chr5.2:79565027-79565046 MS.gene81409:CDS 25.0%
!! GTATTTTCTCCTAATAATGA+TGG - chr5.2:79568769-79568788 MS.gene81409:CDS 25.0%
!! TATTGTTTCAACCTTTTAGT+AGG - chr5.2:79565201-79565220 MS.gene81409:CDS 25.0%
!! TCCTTTATTTCATTGATAAC+AGG + chr5.2:79566849-79566868 None:intergenic 25.0%
!! TGATTTTATATTTCTTGTGC+AGG - chr5.2:79569391-79569410 MS.gene81409:intron 25.0%
!! TTTCCATAGTTTTCTATCAT+AGG - chr5.2:79564899-79564918 MS.gene81409:CDS 25.0%
!!! ACATTTTTTTCCCTACTAAA+AGG + chr5.2:79565215-79565234 None:intergenic 25.0%
!!! TTTTATTGATTCATGTTGCA+GGG - chr5.2:79566229-79566248 MS.gene81409:CDS 25.0%
!!! TTTTTATTGATTCATGTTGC+AGG - chr5.2:79566228-79566247 MS.gene81409:CDS 25.0%
!!! TTTTTGTTGTTGTTTGAAAC+AGG - chr5.2:79565646-79565665 MS.gene81409:intron 25.0%
!!! TTTTTTCTTTTTCAAGGGTT+TGG - chr5.2:79568061-79568080 MS.gene81409:CDS 25.0%
AAAAGAAATCACGAGAGAAA+AGG - chr5.2:79568097-79568116 MS.gene81409:intron 30.0%
AAACACAATGCTATAATGCA+TGG - chr5.2:79569042-79569061 MS.gene81409:intron 30.0%
AACAGTTCAATTATCAGTGT+CGG - chr5.2:79565534-79565553 MS.gene81409:CDS 30.0%
AACCTTCATCTGTGATAATT+TGG + chr5.2:79565823-79565842 None:intergenic 30.0%
AAGTCTCAAGATTCAACTTA+GGG - chr5.2:79569203-79569222 MS.gene81409:intron 30.0%
AAGTTCCAATAAGGATTTGT+TGG - chr5.2:79567600-79567619 MS.gene81409:CDS 30.0%
ACAAAAGTGGAAGTGAATAA+TGG + chr5.2:79565769-79565788 None:intergenic 30.0%
ACACAAATTCTGATTAAGGT+AGG - chr5.2:79565909-79565928 MS.gene81409:intron 30.0%
ACTGCAAAACGTTTCTAATT+AGG + chr5.2:79564968-79564987 None:intergenic 30.0%
AGAAAACATCAAATAGTACC+TGG + chr5.2:79565180-79565199 None:intergenic 30.0%
AGGTATACAATGGACAAATT+GGG - chr5.2:79565666-79565685 MS.gene81409:intron 30.0%
AGGTGATGAAATTGAAAAAG+AGG - chr5.2:79567306-79567325 MS.gene81409:CDS 30.0%
AGTCACACAAATTCTGATTA+AGG - chr5.2:79565905-79565924 MS.gene81409:intron 30.0%
ATGTGAAATTAAAGAAGTCC+GGG - chr5.2:79568570-79568589 MS.gene81409:CDS 30.0%
ATTGAAACAGCTATATAGAG+AGG - chr5.2:79569544-79569563 MS.gene81409:CDS 30.0%
ATTTGATCTTTATATGCTGC+AGG - chr5.2:79565996-79566015 MS.gene81409:CDS 30.0%
CAAAAATCAGGAATTTACAG+AGG - chr5.2:79567515-79567534 MS.gene81409:intron 30.0%
CAACATCAATAAGGCTAATT+CGG + chr5.2:79566291-79566310 None:intergenic 30.0%
CAATGGAATATTTCTTCTGT+TGG + chr5.2:79567831-79567850 None:intergenic 30.0%
CACAAATTCTGATTAAGGTA+GGG - chr5.2:79565910-79565929 MS.gene81409:intron 30.0%
CGAAAAGCTAAAAAAGCAAA+TGG - chr5.2:79569442-79569461 MS.gene81409:CDS 30.0%
GAAAAAGAACTAAACTCCAT+CGG - chr5.2:79568332-79568351 MS.gene81409:intron 30.0%
GAACTAAATCAATTGGTATG+AGG - chr5.2:79568221-79568240 MS.gene81409:CDS 30.0%
GCCTGTTATCAATGAAATAA+AGG - chr5.2:79566845-79566864 MS.gene81409:CDS 30.0%
GGATAAATATATTAGGAGCA+GGG - chr5.2:79565497-79565516 MS.gene81409:intron 30.0%
GTTAAACAAGAGTTTCTGTT+TGG + chr5.2:79566580-79566599 None:intergenic 30.0%
GTTACTAGTTGCTTCTAATA+AGG + chr5.2:79564939-79564958 None:intergenic 30.0%
TAGATACATACCTGTTATCT+GGG + chr5.2:79566663-79566682 None:intergenic 30.0%
TCACTGACAGATATATCAAT+AGG + chr5.2:79567256-79567275 None:intergenic 30.0%
TCCATTCAATTGAGAAAAAG+TGG - chr5.2:79568745-79568764 MS.gene81409:intron 30.0%
TCTTGGAAGTTCAAACAAAT+TGG - chr5.2:79567564-79567583 MS.gene81409:CDS 30.0%
TGGAAAGACATATACAATGT+GGG - chr5.2:79565303-79565322 MS.gene81409:CDS 30.0%
TTAGATACATACCTGTTATC+TGG + chr5.2:79566664-79566683 None:intergenic 30.0%
TTGTAGATTAGAAACAAGCA+TGG + chr5.2:79568436-79568455 None:intergenic 30.0%
TTTATTTGAATTCCTTCAGG+TGG - chr5.2:79568295-79568314 MS.gene81409:intron 30.0%
TTTGATCTTTATATGCTGCA+GGG - chr5.2:79565997-79566016 MS.gene81409:CDS 30.0%
! AATCGTTATACTTTTCTTGG+AGG + chr5.2:79569014-79569033 None:intergenic 30.0%
! AGAGAATTCAAGTTCCAATA+AGG - chr5.2:79567591-79567610 MS.gene81409:CDS 30.0%
! AGATAATTGATTCTCATCAG+AGG - chr5.2:79567728-79567747 MS.gene81409:intron 30.0%
! AGTTCCAATAAGGATTTGTT+GGG - chr5.2:79567601-79567620 MS.gene81409:CDS 30.0%
! CCAAATCGTTATACTTTTCT+TGG + chr5.2:79569017-79569036 None:intergenic 30.0%
! CCAAGAAAAGTATAACGATT+TGG - chr5.2:79569014-79569033 MS.gene81409:intron 30.0%
! CTAAAAATGTGGCAAGTTTT+GGG - chr5.2:79565591-79565610 MS.gene81409:CDS 30.0%
! CTCTGTAAATTCCTGATTTT+TGG + chr5.2:79567517-79567536 None:intergenic 30.0%
! GAAAAAGAGGAAGTATGTTT+GGG - chr5.2:79567319-79567338 MS.gene81409:CDS 30.0%
! TATTTTCTGCATCTGGATTT+GGG + chr5.2:79564349-79564368 None:intergenic 30.0%
! TCTAAAAATGTGGCAAGTTT+TGG - chr5.2:79565590-79565609 MS.gene81409:CDS 30.0%
! TCTAGAGCTCTTAGAATTTA+AGG + chr5.2:79566052-79566071 None:intergenic 30.0%
! TGAAAAAGAGGAAGTATGTT+TGG - chr5.2:79567318-79567337 MS.gene81409:CDS 30.0%
! TGATTGACAATGACTTTTGA+GGG + chr5.2:79564406-79564425 None:intergenic 30.0%
! TGTTTGAAACAGGTATACAA+TGG - chr5.2:79565656-79565675 MS.gene81409:intron 30.0%
! TTGATTGACAATGACTTTTG+AGG + chr5.2:79564407-79564426 None:intergenic 30.0%
! TTTTCTCCTAATAATGATGG+CGG - chr5.2:79568772-79568791 MS.gene81409:CDS 30.0%
!! ATTGTAACTTGTGTTTTGTC+TGG - chr5.2:79566974-79566993 MS.gene81409:intron 30.0%
!! CCTGATCAGTTATTATTTTG+CGG + chr5.2:79567888-79567907 None:intergenic 30.0%
!! GAAGATATTTTTCAGTCAGT+TGG - chr5.2:79565097-79565116 MS.gene81409:CDS 30.0%
!! GAGTTTTATAGTTCATGTGA+AGG - chr5.2:79567226-79567245 MS.gene81409:intron 30.0%
!! GTTTGAAGTTGATTTTCTCT+TGG + chr5.2:79564318-79564337 None:intergenic 30.0%
!!! ACCACTTTTTCTCAATTGAA+TGG + chr5.2:79568749-79568768 None:intergenic 30.0%
!!! TTCTGTTGTTTGTTTTGTTC+AGG - chr5.2:79565075-79565094 MS.gene81409:CDS 30.0%
!!! TTTTTGAGTTACAAAAGTGC+AGG - chr5.2:79569322-79569341 MS.gene81409:intron 30.0%
AACATTGCTTGATCTTAGTG+AGG + chr5.2:79567659-79567678 None:intergenic 35.0%
AACCTTGAGGTAAGCATATA+TGG - chr5.2:79565713-79565732 MS.gene81409:CDS 35.0%
AAGAAATCCTTATCACAGCT+TGG - chr5.2:79566376-79566395 MS.gene81409:CDS 35.0%
AAGAGAATGATCTAGGAAGA+AGG + chr5.2:79564295-79564314 None:intergenic 35.0%
ACAATTCCTTTGTGACTTTG+AGG + chr5.2:79565361-79565380 None:intergenic 35.0%
AGAAATCCTTATCACAGCTT+GGG - chr5.2:79566377-79566396 MS.gene81409:CDS 35.0%
AGCATATATGGCTACCTTTA+TGG - chr5.2:79565725-79565744 MS.gene81409:CDS 35.0%
AGGAGATGAAACTGTTAAGA+AGG - chr5.2:79564757-79564776 MS.gene81409:CDS 35.0%
AGGATAACTTCTTAATCTCC+GGG - chr5.2:79569342-79569361 MS.gene81409:intron 35.0%
ATATAGAGAGGATTCTGATG+TGG - chr5.2:79569556-79569575 MS.gene81409:CDS 35.0%
ATATGGCTACCTTTATGGTA+CGG - chr5.2:79565730-79565749 MS.gene81409:CDS 35.0%
ATCTCCTATTCCAATGTTAG+CGG + chr5.2:79564744-79564763 None:intergenic 35.0%
ATGACAAAACCGTACCATAA+AGG + chr5.2:79565742-79565761 None:intergenic 35.0%
CAAGCTCAGAAAACAACATT+TGG + chr5.2:79565396-79565415 None:intergenic 35.0%
CAAGTCTCAAGATTCAACTT+AGG - chr5.2:79569202-79569221 MS.gene81409:intron 35.0%
CAGGATAACTTCTTAATCTC+CGG - chr5.2:79569341-79569360 MS.gene81409:intron 35.0%
CAGGTATACAATGGACAAAT+TGG - chr5.2:79565665-79565684 MS.gene81409:intron 35.0%
CAGTATTATTCTGTTGAGGA+AGG - chr5.2:79567286-79567305 MS.gene81409:CDS 35.0%
CATCTGGATTTGGGAATTTA+GGG + chr5.2:79564340-79564359 None:intergenic 35.0%
CCGCAAAATAATAACTGATC+AGG - chr5.2:79567885-79567904 MS.gene81409:CDS 35.0%
CGAAAGCCTCAATAATTTGA+GGG - chr5.2:79567096-79567115 MS.gene81409:CDS 35.0%
CGAGTGATTCATGTAGTAAA+CGG + chr5.2:79566603-79566622 None:intergenic 35.0%
CGGATAAATATATTAGGAGC+AGG - chr5.2:79565496-79565515 MS.gene81409:intron 35.0%
CGTTTACTACATGAATCACT+CGG - chr5.2:79566601-79566620 MS.gene81409:CDS 35.0%
CTCAAAAAATGCATTGTCCT+TGG - chr5.2:79565845-79565864 MS.gene81409:intron 35.0%
CTGTTTCATTTCATTGACGT+AGG - chr5.2:79566503-79566522 MS.gene81409:CDS 35.0%
CTTCCTCAACAGAATAATAC+TGG + chr5.2:79567288-79567307 None:intergenic 35.0%
CTTCTGATACATTGTGTGTT+GGG - chr5.2:79564783-79564802 MS.gene81409:CDS 35.0%
GACCTTGTATTCATCTTTCA+GGG + chr5.2:79568414-79568433 None:intergenic 35.0%
GAGCATTATCATCTGAACAA+GGG + chr5.2:79565624-79565643 None:intergenic 35.0%
GAGTGATTCATGTAGTAAAC+GGG + chr5.2:79566602-79566621 None:intergenic 35.0%
GGAAAGACATATACAATGTG+GGG - chr5.2:79565304-79565323 MS.gene81409:CDS 35.0%
GGAACATATTACTGAGAGTT+TGG + chr5.2:79566635-79566654 None:intergenic 35.0%
GGAAGAACTTATTAGAGCAA+AGG - chr5.2:79567015-79567034 MS.gene81409:intron 35.0%
GGTATACAATGGACAAATTG+GGG - chr5.2:79565667-79565686 MS.gene81409:intron 35.0%
GTCCAAATTATCACAGATGA+AGG - chr5.2:79565818-79565837 MS.gene81409:CDS 35.0%
GTGGAAAGACATATACAATG+TGG - chr5.2:79565302-79565321 MS.gene81409:CDS 35.0%
TAGAGAAAGAAAGAGAGAGA+TGG - chr5.2:79568803-79568822 MS.gene81409:CDS 35.0%
TCATTGCTGCATGCTTATTA+TGG - chr5.2:79565791-79565810 MS.gene81409:CDS 35.0%
TCCAAGACAACTAGATGAAA+AGG + chr5.2:79567551-79567570 None:intergenic 35.0%
TCTTCTGATACATTGTGTGT+TGG - chr5.2:79564782-79564801 MS.gene81409:CDS 35.0%
TGAAGATGTGAATGTGAATG+AGG - chr5.2:79567171-79567190 MS.gene81409:intron 35.0%
TGCAGCAATGAAAACAAAAG+TGG + chr5.2:79565782-79565801 None:intergenic 35.0%
TGGAAGTTCAAACAAATTGG+CGG - chr5.2:79567567-79567586 MS.gene81409:CDS 35.0%
TGTAGCAGTTCTTTCATCAA+TGG + chr5.2:79567848-79567867 None:intergenic 35.0%
TGTCCAGTATTATTCTGTTG+AGG - chr5.2:79567282-79567301 MS.gene81409:CDS 35.0%
TTACTGAGTCTCCAAAAATC+AGG - chr5.2:79567503-79567522 MS.gene81409:intron 35.0%
TTATCTGTAATCCCCTCTTA+AGG + chr5.2:79567714-79567733 None:intergenic 35.0%
TTCAATTCTATCATATGGCC+AGG - chr5.2:79565159-79565178 MS.gene81409:CDS 35.0%
TTCTGATACATTGTGTGTTG+GGG - chr5.2:79564784-79564803 MS.gene81409:CDS 35.0%
TTGGTTAGAAATGCTTTAGC+TGG - chr5.2:79565127-79565146 MS.gene81409:CDS 35.0%
TTTAACTCTTTGTGCTAGTC+TGG - chr5.2:79565277-79565296 MS.gene81409:CDS 35.0%
TTTCAGTCAGCTCATCTATT+CGG - chr5.2:79567452-79567471 MS.gene81409:intron 35.0%
TTTCTCCTAATAATGATGGC+GGG - chr5.2:79568773-79568792 MS.gene81409:CDS 35.0%
! AAGAGGTGTAGTTGAAATTG+GGG + chr5.2:79564453-79564472 None:intergenic 35.0%
! ACTACTGAAACCATTTGTTG+AGG + chr5.2:79566257-79566276 None:intergenic 35.0%
! ACTCAAAAGAAAGCACAAGA+TGG - chr5.2:79569469-79569488 MS.gene81409:CDS 35.0%
! AGAGCATTATCATCTGAACA+AGG + chr5.2:79565625-79565644 None:intergenic 35.0%
! AGATCAAGCAATGTTTTTCC+AGG - chr5.2:79567664-79567683 MS.gene81409:intron 35.0%
! CAAGAGGTGTAGTTGAAATT+GGG + chr5.2:79564454-79564473 None:intergenic 35.0%
! CCTCAACTTCATTCTCTTTT+GGG - chr5.2:79567770-79567789 MS.gene81409:intron 35.0%
! GCACTTGTTGATTGTATTGT+AGG - chr5.2:79566760-79566779 MS.gene81409:CDS 35.0%
! GCTAAAGCATTTCTAACCAA+AGG + chr5.2:79565127-79565146 None:intergenic 35.0%
! GTATTTTCTGCATCTGGATT+TGG + chr5.2:79564350-79564369 None:intergenic 35.0%
! TCAAGAGGTGTAGTTGAAAT+TGG + chr5.2:79564455-79564474 None:intergenic 35.0%
! TCCTCAACTTCATTCTCTTT+TGG - chr5.2:79567769-79567788 MS.gene81409:intron 35.0%
! TTCTTTGAGTTAGTTCTTCC+CGG + chr5.2:79568591-79568610 None:intergenic 35.0%
! TTTCTTTTTCCTTAGCTGCT+TGG + chr5.2:79568145-79568164 None:intergenic 35.0%
! TTTGTCTGGTATGTTTTGTC+TGG - chr5.2:79566988-79567007 MS.gene81409:intron 35.0%
! TTTTGATACCAACACAAGTC+AGG - chr5.2:79564832-79564851 MS.gene81409:CDS 35.0%
!! ATTAGCCTTATTGATGTTGC+TGG - chr5.2:79566292-79566311 MS.gene81409:CDS 35.0%
!! GTTCCAATAAGGATTTGTTG+GGG - chr5.2:79567602-79567621 MS.gene81409:CDS 35.0%
!! TCACTTTTGTGATTGAGTCT+TGG - chr5.2:79566085-79566104 MS.gene81409:CDS 35.0%
!! TTAGCCTTATTGATGTTGCT+GGG - chr5.2:79566293-79566312 MS.gene81409:CDS 35.0%
!! TTGATGGACTAATGAGATGA+AGG - chr5.2:79565244-79565263 MS.gene81409:CDS 35.0%
!! TTGTCAGTGGACATTTTAAC+TGG + chr5.2:79568700-79568719 None:intergenic 35.0%
AACAACATTTGGAAGATCCG+AGG + chr5.2:79565385-79565404 None:intergenic 40.0%
AACTGATCAGGATTCCAATG+AGG - chr5.2:79567897-79567916 MS.gene81409:intron 40.0%
AAGAGAGAGATGGACAGAAA+TGG - chr5.2:79568813-79568832 MS.gene81409:CDS 40.0%
AGAACTGCTACATTGCTTTG+TGG - chr5.2:79567856-79567875 MS.gene81409:CDS 40.0%
AGATGTGAATGTGAATGAGG+AGG - chr5.2:79567174-79567193 MS.gene81409:intron 40.0%
AGCCATATATGCTTACCTCA+AGG + chr5.2:79565718-79565737 None:intergenic 40.0%
AGCTGACCCTCAAATTATTG+AGG + chr5.2:79567105-79567124 None:intergenic 40.0%
AGTTCTTGGACATGCTAGAA+TGG - chr5.2:79568972-79568991 MS.gene81409:intron 40.0%
ATACATTGTGTGTTGGGGAT+AGG - chr5.2:79564789-79564808 MS.gene81409:CDS 40.0%
ATACCTGTTATCTGGGTAGA+TGG + chr5.2:79566656-79566675 None:intergenic 40.0%
ATGCATGACTTAAAGCTACC+TGG + chr5.2:79567925-79567944 None:intergenic 40.0%
ATTAGACCTACCGCTAACAT+TGG - chr5.2:79564731-79564750 MS.gene81409:CDS 40.0%
ATTTACTTGATCCAACCCAG+CGG - chr5.2:79565690-79565709 MS.gene81409:intron 40.0%
ATTTCATTGACGTAGGCACT+TGG - chr5.2:79566510-79566529 MS.gene81409:CDS 40.0%
CAAGACAGGAACAAAGTTGA+TGG - chr5.2:79566316-79566335 MS.gene81409:CDS 40.0%
CAATACAACTCCTCACAATC+AGG - chr5.2:79569586-79569605 MS.gene81409:CDS 40.0%
CCCAAAAGAGAATGAAGTTG+AGG + chr5.2:79567773-79567792 None:intergenic 40.0%
CTCCCTGAAAGATGAATACA+AGG - chr5.2:79568409-79568428 MS.gene81409:intron 40.0%
CTCTTGGAAGAGAATGATCT+AGG + chr5.2:79564302-79564321 None:intergenic 40.0%
CTTCAGGTGGAGAAACTTAA+AGG - chr5.2:79568308-79568327 MS.gene81409:intron 40.0%
CTTCCCCAACAAATCCTTAT+TGG + chr5.2:79567608-79567627 None:intergenic 40.0%
CTTGAGTAGTTCTTCCTTCT+CGG + chr5.2:79568632-79568651 None:intergenic 40.0%
GAATTTACAGAGGAAGAGTG+TGG - chr5.2:79567525-79567544 MS.gene81409:intron 40.0%
GCACTGAAAAGATCAGTTCT+TGG - chr5.2:79568958-79568977 MS.gene81409:intron 40.0%
GCATCTGGATTTGGGAATTT+AGG + chr5.2:79564341-79564360 None:intergenic 40.0%
GCGAAAGCCTCAATAATTTG+AGG - chr5.2:79567095-79567114 MS.gene81409:CDS 40.0%
GGACCTTGTATTCATCTTTC+AGG + chr5.2:79568415-79568434 None:intergenic 40.0%
GGTTGATCTGAATGATGTTG+GGG + chr5.2:79564385-79564404 None:intergenic 40.0%
GTCACAAAGGAATTGTACCT+CGG - chr5.2:79565365-79565384 MS.gene81409:CDS 40.0%
GTTCATCTCCCTAACTTCAA+TGG - chr5.2:79566917-79566936 MS.gene81409:intron 40.0%
GTTGGGGAAGTCATTTACAA+AGG - chr5.2:79567618-79567637 MS.gene81409:CDS 40.0%
TCACAATCAGGATGATGATC+AGG - chr5.2:79569598-79569617 MS.gene81409:CDS 40.0%
TCTGATTAAGGTAGGGACAA+GGG - chr5.2:79565917-79565936 MS.gene81409:intron 40.0%
TGAACAATACCTTCAGCTGT+CGG + chr5.2:79566902-79566921 None:intergenic 40.0%
TGAAGATCTCAGTTTGTCAG+TGG + chr5.2:79568713-79568732 None:intergenic 40.0%
TGATCATCATCCTGATTGTG+AGG + chr5.2:79569599-79569618 None:intergenic 40.0%
TGCTGAGCTTTCTGCATTAA+GGG - chr5.2:79569137-79569156 MS.gene81409:CDS 40.0%
TGGTAAAAAAAGCAGCAAGC+AGG - chr5.2:79568361-79568380 MS.gene81409:CDS 40.0%
TGGTGCTTACTTTCACTGAA+GGG + chr5.2:79564484-79564503 None:intergenic 40.0%
TGTAGTTGAAATTGGGGGTT+GGG + chr5.2:79564447-79564466 None:intergenic 40.0%
TGTGAATGAGGAGGACATAA+AGG - chr5.2:79567183-79567202 MS.gene81409:intron 40.0%
TGTTAGGTATGAGTAGAGAG+CGG + chr5.2:79567132-79567151 None:intergenic 40.0%
TTACTACATGAATCACTCGG+TGG - chr5.2:79566604-79566623 MS.gene81409:CDS 40.0%
TTCAACTACACCTCTTGACT+CGG - chr5.2:79564457-79564476 MS.gene81409:CDS 40.0%
TTCACTAAAGAACCTCGCTT+GGG - chr5.2:79566541-79566560 MS.gene81409:CDS 40.0%
TTCTGATTAAGGTAGGGACA+AGG - chr5.2:79565916-79565935 MS.gene81409:intron 40.0%
TTTCACTAAAGAACCTCGCT+TGG - chr5.2:79566540-79566559 MS.gene81409:CDS 40.0%
TTTCGCGTACATTCTGTACA+TGG + chr5.2:79567081-79567100 None:intergenic 40.0%
TTTGGAGACTCAGTAAGTTG+TGG + chr5.2:79567499-79567518 None:intergenic 40.0%
! AGAGGTGTAGTTGAAATTGG+GGG + chr5.2:79564452-79564471 None:intergenic 40.0%
! AGGGTTGATCTGAATGATGT+TGG + chr5.2:79564387-79564406 None:intergenic 40.0%
! ATTGAGCAAGCTTTGTCATG+AGG - chr5.2:79567348-79567367 MS.gene81409:CDS 40.0%
! CTTTAAGTTTCTCCACCTGA+AGG + chr5.2:79568310-79568329 None:intergenic 40.0%
! GCCTTTTCATCTAGTTGTCT+TGG - chr5.2:79567547-79567566 MS.gene81409:CDS 40.0%
! GGGTTGATCTGAATGATGTT+GGG + chr5.2:79564386-79564405 None:intergenic 40.0%
! GTAGTTTACCTGACTTGTGT+TGG + chr5.2:79564843-79564862 None:intergenic 40.0%
! TGAACTAAGAGTTGATCTCG+AGG - chr5.2:79568861-79568880 MS.gene81409:intron 40.0%
! TGAGTCTTGGTGTAAGGTAT+TGG - chr5.2:79566098-79566117 MS.gene81409:CDS 40.0%
! TGGTATGTTTTGTCTGGTAC+AGG - chr5.2:79566994-79567013 MS.gene81409:intron 40.0%
! TGTGATTGAGTCTTGGTGTA+AGG - chr5.2:79566092-79566111 MS.gene81409:CDS 40.0%
! TTCTCCTAATAATGATGGCG+GGG - chr5.2:79568774-79568793 MS.gene81409:CDS 40.0%
!! GTTTTGCAGTTTAACTTCGC+TGG - chr5.2:79564978-79564997 MS.gene81409:CDS 40.0%
!!! TATGTTTTTTGCAGCTTCCG+AGG - chr5.2:79568515-79568534 MS.gene81409:CDS 40.0%
!!! TTTTTTACCATACTCGCCGA+TGG + chr5.2:79568351-79568370 None:intergenic 40.0%
AAAGCTACCTGGAACCTCAT+TGG + chr5.2:79567914-79567933 None:intergenic 45.0%
AGCTCAGATGGGAGTAGAAA+TGG - chr5.2:79567049-79567068 MS.gene81409:CDS 45.0%
ATCAGCCAACAACACCTCAA+GGG - chr5.2:79567402-79567421 MS.gene81409:intron 45.0%
ATCAGGATGATGATCAGGCA+TGG - chr5.2:79569603-79569622 MS.gene81409:CDS 45.0%
CAGTGCATCATCTAACTCCT+CGG + chr5.2:79568944-79568963 None:intergenic 45.0%
CCTACCGCTAACATTGGAAT+AGG - chr5.2:79564737-79564756 MS.gene81409:CDS 45.0%
CCTATTCCAATGTTAGCGGT+AGG + chr5.2:79564740-79564759 None:intergenic 45.0%
CGAGAAGGAAGAACTACTCA+AGG - chr5.2:79568630-79568649 MS.gene81409:intron 45.0%
CTGATGTTCGAAGCTCAGAT+GGG - chr5.2:79567038-79567057 MS.gene81409:CDS 45.0%
CTGCTGAGCTTTCTGCATTA+AGG - chr5.2:79569136-79569155 MS.gene81409:CDS 45.0%
CTTGCCCAGCAACATCAATA+AGG + chr5.2:79566300-79566319 None:intergenic 45.0%
GCTGCATGCTTATTATGGCT+TGG - chr5.2:79565796-79565815 MS.gene81409:CDS 45.0%
GGACAGAAATGGAAAGTGAG+TGG - chr5.2:79568824-79568843 MS.gene81409:intron 45.0%
GGAGCTTGAGAATGTTTGCA+AGG - chr5.2:79568118-79568137 MS.gene81409:intron 45.0%
GGTCTCTCTAGCAGAAAAGT+TGG - chr5.2:79566018-79566037 MS.gene81409:CDS 45.0%
GTGGTGCTTACTTTCACTGA+AGG + chr5.2:79564485-79564504 None:intergenic 45.0%
GTGTAGTTGAAATTGGGGGT+TGG + chr5.2:79564448-79564467 None:intergenic 45.0%
GTTCCATCTACCCAGATAAC+AGG - chr5.2:79566650-79566669 MS.gene81409:CDS 45.0%
TACCATGAAGCAGTACCTTG+CGG - chr5.2:79569499-79569518 MS.gene81409:CDS 45.0%
TATAATGCATGGCATAGCCG+AGG - chr5.2:79569053-79569072 MS.gene81409:intron 45.0%
TCCATCTGGATTTCCTGCTT+CGG + chr5.2:79567956-79567975 None:intergenic 45.0%
TCCTTACCCAAGCTGTGATA+AGG + chr5.2:79566386-79566405 None:intergenic 45.0%
TCCTTATCACAGCTTGGGTA+AGG - chr5.2:79566382-79566401 MS.gene81409:CDS 45.0%
TCTTCCCCGCCATCATTATT+AGG + chr5.2:79568781-79568800 None:intergenic 45.0%
TGAAGATCTAATGGCCCTTG+AGG + chr5.2:79567419-79567438 None:intergenic 45.0%
TGAATGATGTTGGGGTCTGT+GGG + chr5.2:79564377-79564396 None:intergenic 45.0%
TGAGCTTTCTGCATTAAGGG+TGG - chr5.2:79569140-79569159 MS.gene81409:CDS 45.0%
TGATCAAATCCGACAGCTGA+AGG - chr5.2:79566890-79566909 MS.gene81409:CDS 45.0%
TTCCTCACTCAGATTCTCCA+AGG + chr5.2:79565865-79565884 None:intergenic 45.0%
TTCTGCATTAAGGGTGGAGA+GGG - chr5.2:79569146-79569165 MS.gene81409:CDS 45.0%
TTGCAGGGAACCTCAACAAA+TGG - chr5.2:79566244-79566263 MS.gene81409:CDS 45.0%
TTTCTGCATTAAGGGTGGAG+AGG - chr5.2:79569145-79569164 MS.gene81409:CDS 45.0%
! AGCTGTTTCAATGCAGACTC+TGG + chr5.2:79569536-79569555 None:intergenic 45.0%
! GTTGTTGGCTGATGCATACA+AGG + chr5.2:79567395-79567414 None:intergenic 45.0%
! TCAGTCAGTTGGTGTTCCTT+TGG - chr5.2:79565108-79565127 MS.gene81409:CDS 45.0%
! TCTTTGTGCTAGTCTGGAAG+TGG - chr5.2:79565283-79565302 MS.gene81409:CDS 45.0%
! TGTGGTTCCTCAAGAAGCAT+TGG + chr5.2:79567481-79567500 None:intergenic 45.0%
!! AGGAAATCCAGATGGACTGA+CGG - chr5.2:79567960-79567979 MS.gene81409:intron 45.0%
!! CAAGGGTTTGGAGAGTATTC+TGG - chr5.2:79568073-79568092 MS.gene81409:CDS 45.0%
!! CCTTTGTGACTTTGAGGTGA+GGG + chr5.2:79565355-79565374 None:intergenic 45.0%
!! TCCTTTGTGACTTTGAGGTG+AGG + chr5.2:79565356-79565375 None:intergenic 45.0%
!!! GGAGGAGTATTTTCTGCATC+TGG + chr5.2:79564356-79564375 None:intergenic 45.0%
!!! GTGTCGGTGTTGTTTTCTTG+AGG - chr5.2:79565550-79565569 MS.gene81409:CDS 45.0%
ACACTGCGCACACTCAGATT+TGG - chr5.2:79566795-79566814 MS.gene81409:CDS 50.0%
ACATGCAGCTTCTGTTGCAG+AGG - chr5.2:79569284-79569303 MS.gene81409:intron 50.0%
CAGGATTCCAATGAGGTTCC+AGG - chr5.2:79567904-79567923 MS.gene81409:intron 50.0%
CAGGCATGGAGAGCTGAATT+TGG - chr5.2:79569617-79569636 MS.gene81409:CDS 50.0%
CATCAGCCAACAACACCTCA+AGG - chr5.2:79567401-79567420 MS.gene81409:intron 50.0%
CCCTCACCTCAAAGTCACAA+AGG - chr5.2:79565352-79565371 MS.gene81409:CDS 50.0%
CGCAGGCAGACATTGTCTAA+GGG - chr5.2:79566339-79566358 MS.gene81409:CDS 50.0%
CTAAACTCCATCGGCGAGTA+TGG - chr5.2:79568341-79568360 MS.gene81409:intron 50.0%
CTCCTCAAACATGGCACTTG+GGG + chr5.2:79565332-79565351 None:intergenic 50.0%
CTCTTTCGATGCTACCGAGA+AGG - chr5.2:79568615-79568634 MS.gene81409:CDS 50.0%
CTGAATGATGTTGGGGTCTG+TGG + chr5.2:79564378-79564397 None:intergenic 50.0%
CTTGGCAGCAAGCCTTAAGA+GGG - chr5.2:79567699-79567718 MS.gene81409:intron 50.0%
GCAGCAAAGGCTGGAAAAAG+GGG - chr5.2:79569087-79569106 MS.gene81409:CDS 50.0%
GCTCCTCAAACATGGCACTT+GGG + chr5.2:79565333-79565352 None:intergenic 50.0%
GCTGATGTTCGAAGCTCAGA+TGG - chr5.2:79567037-79567056 MS.gene81409:CDS 50.0%
GCTTTGTCATGAGGACAGTG+TGG - chr5.2:79567357-79567376 MS.gene81409:CDS 50.0%
GGCAGCAAAGGCTGGAAAAA+GGG - chr5.2:79569086-79569105 MS.gene81409:CDS 50.0%
GTCCTTGGAGAATCTGAGTG+AGG - chr5.2:79565860-79565879 MS.gene81409:intron 50.0%
GTTAGAGAAGATGTGCACCG+AGG - chr5.2:79568924-79568943 MS.gene81409:intron 50.0%
TAGGAGCAGGGTATGTCTGA+GGG - chr5.2:79565509-79565528 MS.gene81409:CDS 50.0%
TCCTCAAACATGGCACTTGG+GGG + chr5.2:79565331-79565350 None:intergenic 50.0%
TCGGTCTCCAATGCTTCTTG+AGG - chr5.2:79567471-79567490 MS.gene81409:intron 50.0%
TTAGGAGCAGGGTATGTCTG+AGG - chr5.2:79565508-79565527 MS.gene81409:CDS 50.0%
TTGATGTTGCTGGGCAAGAC+AGG - chr5.2:79566302-79566321 MS.gene81409:CDS 50.0%
TTGCAAGGACCAAGCAGCTA+AGG - chr5.2:79568133-79568152 MS.gene81409:intron 50.0%
TTGGCAGCAAGCCTTAAGAG+GGG - chr5.2:79567700-79567719 MS.gene81409:intron 50.0%
! GGGTTGGGAGTGTGATTGTT+TGG + chr5.2:79564432-79564451 None:intergenic 50.0%
! TCTTTTGGGCGCTTAAGCTG+TGG - chr5.2:79567784-79567803 MS.gene81409:intron 50.0%
!! AATGGCCCTTGAGGTGTTGT+TGG + chr5.2:79567410-79567429 None:intergenic 50.0%
!! ACTTCTGCTTTTCCCAAGCG+AGG + chr5.2:79566556-79566575 None:intergenic 50.0%
!! AGGAACAAAGTTGATGGCGC+AGG - chr5.2:79566322-79566341 MS.gene81409:CDS 50.0%
!! CTGGTAATTTGCTCTCCGCA+AGG + chr5.2:79569517-79569536 None:intergenic 50.0%
!! TCCAGATGGACTGACGGATA+AGG - chr5.2:79567966-79567985 MS.gene81409:intron 50.0%
AAGCTCAGCAGCGAGCGATT+TGG + chr5.2:79569127-79569146 None:intergenic 55.0%
ACTGAAGGGTCCGAGTCAAG+AGG + chr5.2:79564470-79564489 None:intergenic 55.0%
AGAGGGTTGAGCAGGAACTG+AGG - chr5.2:79568902-79568921 MS.gene81409:intron 55.0%
AGGAGCAGGGTATGTCTGAG+GGG - chr5.2:79565510-79565529 MS.gene81409:CDS 55.0%
AGGTGAGGGCTCCTCAAACA+TGG + chr5.2:79565341-79565360 None:intergenic 55.0%
ATCTCCGGGTGCAACTTCAG+TGG - chr5.2:79569356-79569375 MS.gene81409:intron 55.0%
ATGATGTTGGGGTCTGTGGG+AGG + chr5.2:79564374-79564393 None:intergenic 55.0%
CATAGCCGAGGTGAAGAAGG+CGG - chr5.2:79569065-79569084 MS.gene81409:intron 55.0%
CCTTGGCAGCAAGCCTTAAG+AGG - chr5.2:79567698-79567717 MS.gene81409:intron 55.0%
CGGCAGCAAAGGCTGGAAAA+AGG - chr5.2:79569085-79569104 MS.gene81409:CDS 55.0%
CTTGCTGCCAAGGACTCAGT+CGG + chr5.2:79567691-79567710 None:intergenic 55.0%
GCAGAAGCTGTTCATGCAGC+TGG - chr5.2:79569231-79569250 MS.gene81409:intron 55.0%
GCAGGCTGAACATGCTGAAG+AGG - chr5.2:79568379-79568398 MS.gene81409:CDS 55.0%
GCCGAAGCAGGAAATCCAGA+TGG - chr5.2:79567952-79567971 MS.gene81409:intron 55.0%
GCCTTATCCGTCAGTCCATC+TGG + chr5.2:79567970-79567989 None:intergenic 55.0%
GCGCAGGCAGACATTGTCTA+AGG - chr5.2:79566338-79566357 MS.gene81409:CDS 55.0%
GCTTACCTCAAGGTTCCGCT+GGG + chr5.2:79565708-79565727 None:intergenic 55.0%
GGCTCCTCAAACATGGCACT+TGG + chr5.2:79565334-79565353 None:intergenic 55.0%
TCCCCCAAGTGCCATGTTTG+AGG - chr5.2:79565327-79565346 MS.gene81409:CDS 55.0%
TCCTCCACTGAAGTTGCACC+CGG + chr5.2:79569363-79569382 None:intergenic 55.0%
TGCTTACCTCAAGGTTCCGC+TGG + chr5.2:79565709-79565728 None:intergenic 55.0%
TGGCATAGCCGAGGTGAAGA+AGG - chr5.2:79569062-79569081 MS.gene81409:intron 55.0%
! GAGTTGATCTCGAGGCCAAC+CGG - chr5.2:79568869-79568888 MS.gene81409:intron 55.0%
! TGCATTGACACAGCCGAAGC+AGG - chr5.2:79567940-79567959 MS.gene81409:intron 55.0%
!! CAGTCTGAGGAAGTGCTCCT+CGG + chr5.2:79568535-79568554 None:intergenic 55.0%
!! CCTCTTAAGGCTTGCTGCCA+AGG + chr5.2:79567701-79567720 None:intergenic 55.0%
!! CTCCGCAAGGTACTGCTTCA+TGG + chr5.2:79569504-79569523 None:intergenic 55.0%
AAGAAGGCGGCAGCAAAGGC+TGG - chr5.2:79569078-79569097 MS.gene81409:CDS 60.0%
ACCTCAAGGTTCCGCTGGGT+TGG + chr5.2:79565704-79565723 None:intergenic 60.0%
GGTGAAGAAGGCGGCAGCAA+AGG - chr5.2:79569074-79569093 MS.gene81409:intron 60.0%
TCCAACCCAGCGGAACCTTG+AGG - chr5.2:79565700-79565719 MS.gene81409:CDS 60.0%
TCCAGGTCCGACTGAGTCCT+TGG - chr5.2:79567681-79567700 MS.gene81409:intron 60.0%
TCCGGGTGCAACTTCAGTGG+AGG - chr5.2:79569359-79569378 MS.gene81409:intron 60.0%
TGCTGCCGCCTTCTTCACCT+CGG + chr5.2:79569073-79569092 None:intergenic 60.0%
ATCTCGAGGCCAACCGGCAC+AGG - chr5.2:79568875-79568894 MS.gene81409:intron 65.0%
CAACCCTCTCTGCCCTGTGC+CGG + chr5.2:79568891-79568910 None:intergenic 65.0%
CAACCGGCACAGGGCAGAGA+GGG - chr5.2:79568885-79568904 MS.gene81409:intron 65.0%
CAGGGCAGAGAGGGTTGAGC+AGG - chr5.2:79568894-79568913 MS.gene81409:intron 65.0%
GCCAAGGACTCAGTCGGACC+TGG + chr5.2:79567685-79567704 None:intergenic 65.0%
TCTCGAGGCCAACCGGCACA+GGG - chr5.2:79568876-79568895 MS.gene81409:intron 65.0%
CCAACCGGCACAGGGCAGAG+AGG - chr5.2:79568884-79568903 MS.gene81409:intron 70.0%
! CCTCTCTGCCCTGTGCCGGT+TGG + chr5.2:79568887-79568906 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 79564266 79569664 79564266 ID=MS.gene81409
chr5.2 mRNA 79564266 79569664 79564266 ID=MS.gene81409.t1;Parent=MS.gene81409
chr5.2 exon 79569437 79569664 79569437 ID=MS.gene81409.t1.exon1;Parent=MS.gene81409.t1
chr5.2 CDS 79569437 79569664 79569437 ID=cds.MS.gene81409.t1;Parent=MS.gene81409.t1
chr5.2 exon 79569077 79569211 79569077 ID=MS.gene81409.t1.exon2;Parent=MS.gene81409.t1
chr5.2 CDS 79569077 79569211 79569077 ID=cds.MS.gene81409.t1;Parent=MS.gene81409.t1
chr5.2 exon 79568750 79568833 79568750 ID=MS.gene81409.t1.exon3;Parent=MS.gene81409.t1
chr5.2 CDS 79568750 79568833 79568750 ID=cds.MS.gene81409.t1;Parent=MS.gene81409.t1
chr5.2 exon 79568510 79568635 79568510 ID=MS.gene81409.t1.exon4;Parent=MS.gene81409.t1
chr5.2 CDS 79568510 79568635 79568510 ID=cds.MS.gene81409.t1;Parent=MS.gene81409.t1
chr5.2 exon 79568359 79568418 79568359 ID=MS.gene81409.t1.exon5;Parent=MS.gene81409.t1
chr5.2 CDS 79568359 79568418 79568359 ID=cds.MS.gene81409.t1;Parent=MS.gene81409.t1
chr5.2 exon 79568209 79568262 79568209 ID=MS.gene81409.t1.exon6;Parent=MS.gene81409.t1
chr5.2 CDS 79568209 79568262 79568209 ID=cds.MS.gene81409.t1;Parent=MS.gene81409.t1
chr5.2 exon 79568004 79568096 79568004 ID=MS.gene81409.t1.exon7;Parent=MS.gene81409.t1
chr5.2 CDS 79568004 79568096 79568004 ID=cds.MS.gene81409.t1;Parent=MS.gene81409.t1
chr5.2 exon 79567817 79567912 79567817 ID=MS.gene81409.t1.exon8;Parent=MS.gene81409.t1
chr5.2 CDS 79567817 79567912 79567817 ID=cds.MS.gene81409.t1;Parent=MS.gene81409.t1
chr5.2 exon 79567532 79567680 79567532 ID=MS.gene81409.t1.exon9;Parent=MS.gene81409.t1
chr5.2 CDS 79567532 79567680 79567532 ID=cds.MS.gene81409.t1;Parent=MS.gene81409.t1
chr5.2 exon 79567259 79567405 79567259 ID=MS.gene81409.t1.exon10;Parent=MS.gene81409.t1
chr5.2 CDS 79567259 79567405 79567259 ID=cds.MS.gene81409.t1;Parent=MS.gene81409.t1
chr5.2 exon 79567019 79567148 79567019 ID=MS.gene81409.t1.exon11;Parent=MS.gene81409.t1
chr5.2 CDS 79567019 79567148 79567019 ID=cds.MS.gene81409.t1;Parent=MS.gene81409.t1
chr5.2 exon 79565934 79566914 79565934 ID=MS.gene81409.t1.exon12;Parent=MS.gene81409.t1
chr5.2 CDS 79565934 79566914 79565934 ID=cds.MS.gene81409.t1;Parent=MS.gene81409.t1
chr5.2 exon 79565695 79565853 79565695 ID=MS.gene81409.t1.exon13;Parent=MS.gene81409.t1
chr5.2 CDS 79565695 79565853 79565695 ID=cds.MS.gene81409.t1;Parent=MS.gene81409.t1
chr5.2 exon 79565500 79565616 79565500 ID=MS.gene81409.t1.exon14;Parent=MS.gene81409.t1
chr5.2 CDS 79565500 79565616 79565500 ID=cds.MS.gene81409.t1;Parent=MS.gene81409.t1
chr5.2 exon 79564625 79565401 79564625 ID=MS.gene81409.t1.exon15;Parent=MS.gene81409.t1
chr5.2 CDS 79564625 79565401 79564625 ID=cds.MS.gene81409.t1;Parent=MS.gene81409.t1
chr5.2 exon 79564266 79564517 79564266 ID=MS.gene81409.t1.exon16;Parent=MS.gene81409.t1
chr5.2 CDS 79564266 79564517 79564266 ID=cds.MS.gene81409.t1;Parent=MS.gene81409.t1
Gene Sequence

>MS.gene81409

ATGTCTTCTACATCATCTATCAGAAACCTTCTTCCTAGATCATTCTCTTCCAAGAGAAAATCAACTTCAAACCCTAAATTCCCAAATCCAGATGCAGAAAATACTCCTCCCACAGACCCCAACATCATTCAGATCAACCCTCAAAAGTCATTGTCAATCAAAACCAAACAATCACACTCCCAACCCCCAATTTCAACTACACCTCTTGACTCGGACCCTTCAGTGAAAGTAAGCACCACTTTTCAAAAAAATTCATTTTTCTGCTTAATTTTTGTAAATCGAACCTTTAATGTTTGAACTCAGAAATGGGTATATATCTAAAAATCATTTTTTTTGTTTCTCTTTCTAATTTTGCTCAAAATATGGGTATTATAAGTAAAATCATAAATCACTGTTTTTTTTGTTTGTTTTTGTTTCAATTATGCTTATGATTTAGATTTGAACTTGAAACAGGTTGTAGTACGAATTAGACCTACCGCTAACATTGGAATAGGAGATGAAACTGTTAAGAAGGTTTCTTCTGATACATTGTGTGTTGGGGATAGGCAATTTCAATTTGATTCAATTTTTGATACCAACACAAGTCAGGTAAACTACTTTACTTCACTGTTAACTATTTATGGTGTTTTTTTCTTTCCATAGTTTTCTATCATAGGATTGATGTACGTTTCCTTATTAGAAGCAACTAGTAACTTCTTTCCTAATTAGAAACGTTTTGCAGTTTAACTTCGCTGGTTCAATGTTGTTGCTTGATAGATACTCATAATTAAGTTGTAAGAGAAGGATGATAAGTGTGATTTATGTTAAGTTTCTGTTGTTTGTTTTGTTCAGGAAGATATTTTTCAGTCAGTTGGTGTTCCTTTGGTTAGAAATGCTTTAGCTGGTTACAACACTTCAATTCTATCATATGGCCAGGTACTATTTGATGTTTTCTGTATTGTTTCAACCTTTTAGTAGGGAAAAAAATGTTTCTTATATTTGATGGACTAATGAGATGAAGGTTTATTCTTTTTTAACTCTTTGTGCTAGTCTGGAAGTGGAAAGACATATACAATGTGGGGTCCCCCAAGTGCCATGTTTGAGGAGCCCTCACCTCAAAGTCACAAAGGAATTGTACCTCGGATCTTCCAAATGTTGTTTTCTGAGCTTGAAAAAGTATGTTTTATTTCCTACTTAAATTTCTAATGCTTGGAAGTTTGTCTTCTGTTTTTTTTAGTTTTGACTGTTTTTCGGATAAATATATTAGGAGCAGGGTATGTCTGAGGGGAAACAGTTCAATTATCAGTGTCGGTGTTGTTTTCTTGAGGTAATTCTTTATGAAATTTCTAAAAATGTGGCAAGTTTTGGGTGTTGTTCCCTTGTTCAGATGATAATGCTCTTTTTTTGTTGTTGTTTGAAACAGGTATACAATGGACAAATTGGGGATTTACTTGATCCAACCCAGCGGAACCTTGAGGTAAGCATATATGGCTACCTTTATGGTACGGTTTTGTCATTAAACCATTATTCACTTCCACTTTTGTTTTCATTGCTGCATGCTTATTATGGCTTGGTCCAAATTATCACAGATGAAGGTTGACTCAAAAAATGCATTGTCCTTGGAGAATCTGAGTGAGGAATATGTCACTAGCTATGATGAAGTCACACAAATTCTGATTAAGGTAGGGACAAGGGAAGCATGAAAGCAAATATTGTTGAAAATTGAATATGCAAAATTTTCAGCTTAATTGATTTGATCTTTATATGCTGCAGGGTCTCTCTAGCAGAAAAGTTGGAGCAACAACCTTAAATTCTAAGAGCTCTAGATCGCACATTATTTTCACTTTTGTGATTGAGTCTTGGTGTAAGGTATTGGCAGTATAATTCTGTTTAACATGATTCTTTATGGATACAGTCATTTCTATTATTCAAGATTGAAACTGTTATTGTTAATTTTCACTATTAGTTGTTTGCTATGTCTAATTTTTATTGATTCATGTTGCAGGGAACCTCAACAAATGGTTTCAGTAGTTCAAAAAGTAGCCGAATTAGCCTTATTGATGTTGCTGGGCAAGACAGGAACAAAGTTGATGGCGCAGGCAGACATTGTCTAAGGGAAACAAGAAATATAAAGAAATCCTTATCACAGCTTGGGTAAGGATACCATTCATTGCTTGATTAATTTTATATTTTCTACAGTTAAGTTGATGTTTGAAATTAATATCTTGGTCTTATTGTACTTCTTTCATTCTTTTTAACTGTTTCATTTCATTGACGTAGGCACTTGGTAGATGCTTTCACTAAAGAACCTCGCTTGGGAAAAGCAGAAGTTCCAAACAGAAACTCTTGTTTAACCCGTTTACTACATGAATCACTCGGTGGAAATGCCAAACTCTCAGTAATATGTTCCATCTACCCAGATAACAGGTATGTATCTAAATTGAACAATATTGATTATTTGTTTGTAAGCCTAATGACATAAATAATGTATATTTCATTTCTAGATGTAAAGATTGCACTTGTTGATTGTATTGTAGGAATAATAGTGAAACACTGCGCACACTCAGATTTGGACAGAGAGTAAGATCAATTCAAAATGAGCCTGTTATCAATGAAATAAAGGAGGATGATGTTAATGATTTGAGTGATCAAATCCGACAGCTGAAGGTATTGTTCATCTCCCTAACTTCAATGGAAATAATTTATAAAGGATACATGCAAATCTGAAAATTGTAACTTGTGTTTTGTCTGGTATGTTTTGTCTGGTACAGGAAGAACTTATTAGAGCAAAGGCTGATGTTCGAAGCTCAGATGGGAGTAGAAATGGATACTTCCATGTACAGAATGTACGCGAAAGCCTCAATAATTTGAGGGTCAGCTTAAACCGCTCTCTACTCATACCTAACATTGATGATAATGATACTGATGAAGATGTGAATGTGAATGAGGAGGACATAAAGGAATTACGCCAGCAAATTGATGAGTTTTATAGTTCATGTGAAGGAAATCCTATTGATATATCTGTCAGTGAAGATTGTGTCCAGTATTATTCTGTTGAGGAAGGTGATGAAATTGAAAAAGAGGAAGTATGTTTGGGAGAAGAATTGAGCAAGCTTTGTCATGAGGACAGTGTGGCATCAGATAACACCTTGTATGCATCAGCCAACAACACCTCAAGGGCCATTAGATCTTCATTTAGAGATAGCATTTCAGTCAGCTCATCTATTCGGTCTCCAATGCTTCTTGAGGAACCACAACTTACTGAGTCTCCAAAAATCAGGAATTTACAGAGGAAGAGTGTGGCCTTTTCATCTAGTTGTCTTGGAAGTTCAAACAAATTGGCGGAAGAGAATTCAAGTTCCAATAAGGATTTGTTGGGGAAGTCATTTACAAAGGATGAACTTATGAGATCCTCACTAAGATCAAGCAATGTTTTTCCAGGTCCGACTGAGTCCTTGGCAGCAAGCCTTAAGAGGGGATTACAGATAATTGATTCTCATCAGAGGAACTCATTACTGAACAAATCCTCAACTTCATTCTCTTTTGGGCGCTTAAGCTGTGGTGATTCTTCTGATCAAACAATCCAACAGAAGAAATATTCCATTGATGAAAGAACTGCTACATTGCTTTGTGGTTATTGCCGCAAAATAATAACTGATCAGGATTCCAATGAGGTTCCAGGTAGCTTTAAGTCATGCATTGACACAGCCGAAGCAGGAAATCCAGATGGACTGACGGATAAGGCTCCAAAAGTATGTATTGACTTAATTTCTGTTACGTTCTTCAATAGTCTTGTGTTAAACTCATGTAACTATTTTTTTTCTTTTTCAAGGGTTTGGAGAGTATTCTGGAAAAAGAAATCACGAGAGAAAAGGAGCTTGAGAATGTTTGCAAGGACCAAGCAGCTAAGGAAAAAGAAATCACGAGAGAAAAGGAGCTTGAGAATGTTTGCAAGGAGCAAGCAGCTAAAATCGATGAACTAAATCAATTGGTATGAGGATTGTTGACTCATAAATTATGTCTGTAGTTTTTATTTTACACTGCTGACAATTTATTTGAATTCCTTCAGGTGGAGAAACTTAAAGGAGAAAAAGAACTAAACTCCATCGGCGAGTATGGTAAAAAAAGCAGCAAGCAGGCTGAACATGCTGAAGAGGACAATAACTCCCTGAAAGATGAATACAAGGTCCATGCTTGTTTCTAATCTACAATAGAAAGTTATAGCCATTTAAACTTTAAATCTTTGAAGCTGACCCTTATAATTTACTTTTATGTTTTTTGCAGCTTCCGAGGAGCACTTCCTCAGACTGTGATTTAGAAGAAAAATGTGAAATTAAAGAAGTCCGGGAAGAACTAACTCAAAGAAGCATCTCTTTCGATGCTACCGAGAAGGAAGAACTACTCAAGGAAATTCAGAATCTGAGAAGCAAGCTGCAATTATACAGTGATGCACCAGTTAAAATGTCCACTGACAAACTGAGATCTTCATTAATATCAAGATCCATTCAATTGAGAAAAAGTGGTGTATTTTCTCCTAATAATGATGGCGGGGAAGAGCTAGAGAAAGAAAGAGAGAGATGGACAGAAATGGAAAGTGAGTGGATTTGTCTTACTGATGAACTAAGAGTTGATCTCGAGGCCAACCGGCACAGGGCAGAGAGGGTTGAGCAGGAACTGAGGTTAGAGAAGATGTGCACCGAGGAGTTAGATGATGCACTGAAAAGATCAGTTCTTGGACATGCTAGAATGGTAGAACACTATGTTGACCTCCAAGAAAAGTATAACGATTTGGTTGCAAAACACAATGCTATAATGCATGGCATAGCCGAGGTGAAGAAGGCGGCAGCAAAGGCTGGAAAAAGGGGTCATGCTCGCTTTGCCAAATCGCTCGCTGCTGAGCTTTCTGCATTAAGGGTGGAGAGGGAAAGAGAAGCAAAATTCTTGAAAAAGGAGAACACAAGTCTCAAGATTCAACTTAGGGACACTGCAGAAGCTGTTCATGCAGCTGGAGAACTACTTGTCAGACTCAGAGAAGCTGAACATGCAGCTTCTGTTGCAGAGGTAAAATCCCATCTTATTTTTGAGTTACAAAAGTGCAGGATAACTTCTTAATCTCCGGGTGCAACTTCAGTGGAGGAAAGTTTCATGATTTTATATTTCTTGTGCAGGATAATTTTACAAAAGTGCAACAAGATAACGAAAAGCTAAAAAAGCAAATGGATAAACTCAAAAGAAAGCACAAGATGGAGCTGATTACCATGAAGCAGTACCTTGCGGAGAGCAAATTACCAGAGTCTGCATTGAAACAGCTATATAGAGAGGATTCTGATGTGGCACAGAACAATACAACTCCTCACAATCAGGATGATGATCAGGCATGGAGAGCTGAATTTGGAGCAATCTATCAAGAGCATTATTAA
Protein sequence

>MS.gene81409.t1

MSSTSSIRNLLPRSFSSKRKSTSNPKFPNPDAENTPPTDPNIIQINPQKSLSIKTKQSHSQPPISTTPLDSDPSVKVVVRIRPTANIGIGDETVKKVSSDTLCVGDRQFQFDSIFDTNTSQEDIFQSVGVPLVRNALAGYNTSILSYGQSGSGKTYTMWGPPSAMFEEPSPQSHKGIVPRIFQMLFSELEKEQGMSEGKQFNYQCRCCFLEVYNGQIGDLLDPTQRNLEMKVDSKNALSLENLSEEYVTSYDEVTQILIKGLSSRKVGATTLNSKSSRSHIIFTFVIESWCKGTSTNGFSSSKSSRISLIDVAGQDRNKVDGAGRHCLRETRNIKKSLSQLGHLVDAFTKEPRLGKAEVPNRNSCLTRLLHESLGGNAKLSVICSIYPDNRNNSETLRTLRFGQRVRSIQNEPVINEIKEDDVNDLSDQIRQLKEELIRAKADVRSSDGSRNGYFHVQNVRESLNNLRVSLNRSLLIPNIDDNDTDEDVNVNEEDIKELRQQIDEFYSSCEGNPIDISVSEDCVQYYSVEEGDEIEKEEVCLGEELSKLCHEDSVASDNTLYASANNTSRAIRSSFRDSISVSSSIRSPMLLEEPQLTESPKIRNLQRKSVAFSSSCLGSSNKLAEENSSSNKDLLGKSFTKDELMRSSLRSSNVFPGPTESLAASLKRGLQIIDSHQRNSLLNKSSTSFSFGRLSCGDSSDQTIQQKKYSIDERTATLLCGYCRKIITDQDSNEVPGSFKSCIDTAEAGNPDGLTDKAPKGLESILEKEITREKELENVCKDQAAKEKEITREKELENVCKEQAAKIDELNQLVEKLKGEKELNSIGEYGKKSSKQAEHAEEDNNSLKDEYKLPRSTSSDCDLEEKCEIKEVREELTQRSISFDATEKEELLKEIQNLRSKLQLYSDAPVKMSTDKLRSSLISRSIQLRKSGVFSPNNDGGEELEKERERWTEMESEWICLTDELRVDLEANRHRAERVEQELRLEKMCTEELDDALKRSVLGHARMVEHYVDLQEKYNDLVAKHNAIMHGIAEVKKAAAKAGKRGHARFAKSLAAELSALRVEREREAKFLKKENTSLKIQLRDTAEAVHAAGELLVRLREAEHAASVAEDNFTKVQQDNEKLKKQMDKLKRKHKMELITMKQYLAESKLPESALKQLYREDSDVAQNNTTPHNQDDDQAWRAEFGAIYQEHY