Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82763.t1 | XP_013450686.1 | 91.8 | 354 | 19 | 2 | 1 | 344 | 1 | 354 | 3.80E-173 | 617.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82763.t1 | B8E0X6 | 33.3 | 327 | 178 | 9 | 26 | 337 | 3 | 304 | 2.8e-39 | 164.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82763.t1 | A0A072U6C9 | 91.8 | 354 | 19 | 2 | 1 | 344 | 1 | 354 | 2.8e-173 | 617.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049427 | MS.gene82763 | 0.834977 | 2.19E-56 | -1.69E-46 |
| MS.gene049614 | MS.gene82763 | 0.812317 | 4.51E-51 | -1.69E-46 |
| MS.gene049627 | MS.gene82763 | 0.819741 | 9.90E-53 | -1.69E-46 |
| MS.gene050163 | MS.gene82763 | 0.800239 | 1.58E-48 | -1.69E-46 |
| MS.gene050767 | MS.gene82763 | 0.809794 | 1.59E-50 | -1.69E-46 |
| MS.gene050770 | MS.gene82763 | 0.815458 | 9.15E-52 | -1.69E-46 |
| MS.gene050781 | MS.gene82763 | 0.824713 | 6.96E-54 | -1.69E-46 |
| MS.gene050783 | MS.gene82763 | 0.831957 | 1.24E-55 | -1.69E-46 |
| MS.gene05100 | MS.gene82763 | 0.800176 | 1.63E-48 | -1.69E-46 |
| MS.gene051694 | MS.gene82763 | 0.829277 | 5.63E-55 | -1.69E-46 |
| MS.gene052326 | MS.gene82763 | 0.805459 | 1.32E-49 | -1.69E-46 |
| MS.gene053107 | MS.gene82763 | 0.84174 | 3.95E-58 | -1.69E-46 |
| MS.gene053322 | MS.gene82763 | 0.837642 | 4.61E-57 | -1.69E-46 |
| MS.gene054376 | MS.gene82763 | 0.805036 | 1.62E-49 | -1.69E-46 |
| MS.gene054802 | MS.gene82763 | 0.843676 | 1.21E-58 | -1.69E-46 |
| MS.gene054803 | MS.gene82763 | 0.842694 | 2.21E-58 | -1.69E-46 |
| MS.gene054804 | MS.gene82763 | 0.844424 | 7.63E-59 | -1.69E-46 |
| MS.gene055499 | MS.gene82763 | 0.81874 | 1.67E-52 | -1.69E-46 |
| MS.gene056452 | MS.gene82763 | 0.837359 | 5.45E-57 | -1.69E-46 |
| MS.gene057011 | MS.gene82763 | 0.857444 | 1.63E-62 | -1.69E-46 |
| MS.gene057129 | MS.gene82763 | 0.812993 | 3.21E-51 | -1.69E-46 |
| MS.gene058323 | MS.gene82763 | 0.832641 | 8.42E-56 | -1.69E-46 |
| MS.gene059536 | MS.gene82763 | 0.8095 | 1.83E-50 | -1.69E-46 |
| MS.gene059960 | MS.gene82763 | 0.841141 | 5.69E-58 | -1.69E-46 |
| MS.gene06092 | MS.gene82763 | 0.804085 | 2.56E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene82763 | 0.848256 | 6.88E-60 | -1.69E-46 |
| MS.gene061200 | MS.gene82763 | 0.822102 | 2.84E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82763.t1 | MTR_6g003980 | 94.633 | 354 | 9 | 2 | 1 | 344 | 1 | 354 | 0.0 | 671 |
| MS.gene82763.t1 | MTR_6g003980 | 94.068 | 354 | 9 | 3 | 1 | 344 | 1 | 352 | 0.0 | 662 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82763.t1 | AT1G66520 | 66.667 | 354 | 108 | 2 | 1 | 344 | 2 | 355 | 8.17e-174 | 487 |
| MS.gene82763.t1 | AT1G66520 | 64.724 | 326 | 105 | 2 | 1 | 316 | 2 | 327 | 4.28e-153 | 433 |
Find 77 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGTCAATGCAGCTGCTTTC+TGG | 0.125708 | 6.1:+48457 | MS.gene82763:CDS |
| TCATGAAGTTTACCTTATTA+TGG | 0.225256 | 6.1:-47065 | None:intergenic |
| CATTGAACTGCACACTTTCA+TGG | 0.232858 | 6.1:-47237 | None:intergenic |
| CAGGATCTAAACTTCTGATT+AGG | 0.275769 | 6.1:+46077 | MS.gene82763:intron |
| CTTATCAGATTTAAAAGCTT+TGG | 0.282909 | 6.1:+44575 | MS.gene82763:intron |
| TTTCTAGATATTCCTCCTTC+TGG | 0.297526 | 6.1:+44648 | MS.gene82763:CDS |
| TTATGCATTACGGCTGCTTA+TGG | 0.303086 | 6.1:+44606 | MS.gene82763:CDS |
| AGGAGGAATATCTAGAAATT+TGG | 0.308117 | 6.1:-44643 | None:intergenic |
| AGCATCTGTTCTCCATAATA+AGG | 0.323120 | 6.1:+47053 | MS.gene82763:CDS |
| TGCTTTCTGGAATGGCCTCC+GGG | 0.329802 | 6.1:+48470 | MS.gene82763:CDS |
| TCCAGTTCAAAGAGCATTGC+AGG | 0.331837 | 6.1:+45162 | MS.gene82763:CDS |
| CTTGAGCTTCTGTTTCATAA+AGG | 0.341200 | 6.1:+45901 | MS.gene82763:CDS |
| TAGGATGGTGTTAAAGAAAC+TGG | 0.357569 | 6.1:+45298 | MS.gene82763:intron |
| CTGCTTTCTGGAATGGCCTC+CGG | 0.360539 | 6.1:+48469 | MS.gene82763:CDS |
| TGTAGCCTTTGAATCATCTT+GGG | 0.385996 | 6.1:-46146 | None:intergenic |
| AACAGAAGCTCAAGCAAATC+AGG | 0.393602 | 6.1:-45892 | None:intergenic |
| AGGATCTAAACTTCTGATTA+GGG | 0.393965 | 6.1:+46078 | MS.gene82763:intron |
| GGAACCTCAGTTATGCATTA+CGG | 0.394084 | 6.1:+44596 | MS.gene82763:CDS |
| TCAAGTTGATGATCATATAA+AGG | 0.397407 | 6.1:+45384 | MS.gene82763:CDS |
| GTTATGTTGTGTACAGAGTC+AGG | 0.400000 | 6.1:+44187 | MS.gene82763:CDS |
| ACCTGCAATGCTCTTTGAAC+TGG | 0.416492 | 6.1:-45163 | None:intergenic |
| ATGTAGCCTTTGAATCATCT+TGG | 0.427563 | 6.1:-46147 | None:intergenic |
| GCCTCTTTCAAGAGCAAAGT+TGG | 0.432159 | 6.1:-44408 | None:intergenic |
| GCCAACTTTGCTCTTGAAAG+AGG | 0.436963 | 6.1:+44407 | MS.gene82763:CDS |
| ATTGAACTGCACACTTTCAT+GGG | 0.441075 | 6.1:-47236 | None:intergenic |
| ATTGTTTCAGTAGCAATGAT+AGG | 0.444349 | 6.1:-45361 | None:intergenic |
| CGATAGATTGGCAAAAGGCT+AGG | 0.448912 | 6.1:-45130 | None:intergenic |
| AAGAAACCCGTTGTTCTGTT+GGG | 0.452053 | 6.1:+44242 | MS.gene82763:CDS |
| ACTGTTCGTGCACTTGATGC+TGG | 0.472791 | 6.1:+45337 | MS.gene82763:CDS |
| AATGCAGCTGCTTTCTGGAA+TGG | 0.473723 | 6.1:+48462 | MS.gene82763:CDS |
| AAAGATAGCCATGATTCGTC+TGG | 0.475467 | 6.1:-47021 | None:intergenic |
| TTGCCTCTGTCTCTTCTAGC+GGG | 0.476167 | 6.1:-44362 | None:intergenic |
| AAATGGTCAGAATAAAACTT+TGG | 0.487220 | 6.1:+47183 | MS.gene82763:CDS |
| AAAACTTTCACTCTCTCCCT+TGG | 0.487513 | 6.1:+44385 | MS.gene82763:CDS |
| GGTGCGCCCAACAGAACAAC+GGG | 0.488001 | 6.1:-44248 | None:intergenic |
| GAAGAAACCCGTTGTTCTGT+TGG | 0.494064 | 6.1:+44241 | MS.gene82763:CDS |
| GGAGCAGCACCACGATAGAT+TGG | 0.499295 | 6.1:-45142 | None:intergenic |
| AGAATCTTTGCTCTAGATCC+TGG | 0.502056 | 6.1:-47148 | None:intergenic |
| GTATTGGAACTTCAGCTCCC+TGG | 0.503673 | 6.1:+48426 | MS.gene82763:CDS |
| AGGAATATCTAGAAATTTGG+TGG | 0.508162 | 6.1:-44640 | None:intergenic |
| TTCAAGAGCAAAGTTGGCCA+AGG | 0.523928 | 6.1:-44402 | None:intergenic |
| GGTGAGAAAGAAGAATGATT+CGG | 0.528290 | 6.1:+44162 | None:intergenic |
| AGATAGGTCCAGACGAATCA+TGG | 0.540771 | 6.1:+47013 | MS.gene82763:intron |
| AGATGATTCAAAGGCTACAT+TGG | 0.545534 | 6.1:+46150 | MS.gene82763:CDS |
| GATAGATTGGCAAAAGGCTA+GGG | 0.546057 | 6.1:-45129 | None:intergenic |
| TGCATTTGTCAATAGTGCAT+TGG | 0.547205 | 6.1:+47273 | MS.gene82763:CDS |
| CACCACGATAGATTGGCAAA+AGG | 0.549477 | 6.1:-45135 | None:intergenic |
| GGGTTTCTTCTTGTTTGTTG+TGG | 0.552904 | 6.1:-44228 | None:intergenic |
| TTTGCCTCTGTCTCTTCTAG+CGG | 0.558300 | 6.1:-44363 | None:intergenic |
| CATTGGTGTTTCCATGTGGA+AGG | 0.561444 | 6.1:+47290 | MS.gene82763:CDS |
| GACAATAGCAGCAACTTCAA+AGG | 0.572515 | 6.1:-44330 | None:intergenic |
| TTGGTGTTTCCATGTGGAAG+GGG | 0.572569 | 6.1:+47292 | MS.gene82763:CDS |
| AAAGGCTACATTGGCACCAA+AGG | 0.579198 | 6.1:+46159 | MS.gene82763:CDS |
| TGTTGTGGTGAAAGTAGAAG+TGG | 0.580279 | 6.1:-44213 | None:intergenic |
| GGAATATCTAGAAATTTGGT+GGG | 0.580845 | 6.1:-44639 | None:intergenic |
| GTAGCCTTTGAATCATCTTG+GGG | 0.594795 | 6.1:-46145 | None:intergenic |
| AGAATGTGGAGAAGCAGAAG+CGG | 0.597855 | 6.1:-44306 | None:intergenic |
| TTATGTTGTGTACAGAGTCA+GGG | 0.600743 | 6.1:+44188 | MS.gene82763:CDS |
| CCTCTGTCTCTTCTAGCGGG+TGG | 0.601967 | 6.1:-44359 | None:intergenic |
| GCAACTTCAAAGGAAGAATG+TGG | 0.614138 | 6.1:-44320 | None:intergenic |
| TCAAGAGCAAAGTTGGCCAA+GGG | 0.614517 | 6.1:-44401 | None:intergenic |
| GCTTTCTGGAATGGCCTCCG+GGG | 0.620892 | 6.1:+48471 | MS.gene82763:CDS |
| ACAACCCCAAGATGATTCAA+AGG | 0.621667 | 6.1:+46141 | MS.gene82763:CDS |
| TTCATGGGTGCAAACTCGCG+TGG | 0.624132 | 6.1:-47221 | None:intergenic |
| ATTGGTGTTTCCATGTGGAA+GGG | 0.627647 | 6.1:+47291 | MS.gene82763:CDS |
| AGGTGCGCCCAACAGAACAA+CGG | 0.637246 | 6.1:-44249 | None:intergenic |
| AGTGTGGTTCCCCTTCCACA+TGG | 0.637310 | 6.1:-47301 | None:intergenic |
| ATGAATGACTAACCAGAAGG+AGG | 0.654381 | 6.1:-44660 | None:intergenic |
| AACTACACATACCTCGAGTG+TGG | 0.665523 | 6.1:-47317 | None:intergenic |
| CCACCCGCTAGAAGAGACAG+AGG | 0.670796 | 6.1:+44359 | MS.gene82763:CDS |
| TCTTCAGCTTCTGTCCCCGG+AGG | 0.683016 | 6.1:-48485 | None:intergenic |
| TGGAAGGGGAACCACACTCG+AGG | 0.687673 | 6.1:+47306 | MS.gene82763:CDS |
| AGGACTATAGTAGACACTTG+AGG | 0.690791 | 6.1:-44269 | None:intergenic |
| GAGAAAGAAGAATGATTCGG+CGG | 0.701222 | 6.1:+44165 | None:intergenic |
| AGTGCATTGGTGTTTCCATG+TGG | 0.701932 | 6.1:+47286 | MS.gene82763:CDS |
| GCAGCCGTAATGCATAACTG+AGG | 0.749183 | 6.1:-44600 | None:intergenic |
| AAGCGGTGAGAAGTGCATCG+AGG | 0.761991 | 6.1:-44289 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTCATTAATAAAATCA+CGG | - | chr6.1:45500-45519 | None:intergenic | 10.0% |
| !! | AATAAAAAAAATCTTGAAAT+TGG | + | chr6.1:46840-46859 | MS.gene82763:intron | 10.0% |
| !! | ATAAAAAAAATCTTGAAATT+GGG | + | chr6.1:46841-46860 | MS.gene82763:intron | 10.0% |
| !! | TTCTTATTAATTTATTTGTT+TGG | + | chr6.1:44746-44765 | MS.gene82763:intron | 10.0% |
| !! | AAACTAATGTAAAATACAAA+TGG | + | chr6.1:48204-48223 | MS.gene82763:intron | 15.0% |
| !! | AGTGTTCAAAAAAAAAAAAA+AGG | + | chr6.1:46769-46788 | MS.gene82763:intron | 15.0% |
| !! | GAACTAATAATAATATCAAT+AGG | - | chr6.1:46231-46250 | None:intergenic | 15.0% |
| !! | GTTAATTGCAAAAATAAATT+TGG | + | chr6.1:47880-47899 | MS.gene82763:intron | 15.0% |
| !! | TAAAAAAAATCTTGAAATTG+GGG | + | chr6.1:46842-46861 | MS.gene82763:intron | 15.0% |
| !! | TTAGATAATAAGATTGTATT+TGG | - | chr6.1:47724-47743 | None:intergenic | 15.0% |
| !!! | TAATGATTTTTAAAAGCAAA+TGG | - | chr6.1:47943-47962 | None:intergenic | 15.0% |
| !!! | TATTTTATTTAACCATTCAA+TGG | + | chr6.1:44849-44868 | MS.gene82763:intron | 15.0% |
| !! | AAAAAAAACAATCTTCAAAC+TGG | + | chr6.1:45528-45547 | MS.gene82763:intron | 20.0% |
| !! | AAAAGATAAATTAACATCCA+TGG | - | chr6.1:45941-45960 | None:intergenic | 20.0% |
| !! | AACCAAAATGAAAAAGAAAA+TGG | - | chr6.1:47529-47548 | None:intergenic | 20.0% |
| !! | AACTAGTTAATTAGTTAGTT+AGG | - | chr6.1:44483-44502 | None:intergenic | 20.0% |
| !! | AAGTAAATATGAAATAGCAT+TGG | - | chr6.1:46284-46303 | None:intergenic | 20.0% |
| !! | AGTAAATATGAAATAGCATT+GGG | - | chr6.1:46283-46302 | None:intergenic | 20.0% |
| !! | AGTAGTATAAGTAAAACATA+TGG | + | chr6.1:45052-45071 | MS.gene82763:intron | 20.0% |
| !! | ATTTATTTGTTTGGATTGTT+TGG | + | chr6.1:44755-44774 | MS.gene82763:intron | 20.0% |
| !! | GATTGTCTTAATAATATCTT+AGG | + | chr6.1:45657-45676 | MS.gene82763:intron | 20.0% |
| !! | TCGGTAAATCTAAAAAATTT+GGG | + | chr6.1:47600-47619 | MS.gene82763:intron | 20.0% |
| !!! | AAGTACTAATACTATACTTT+TGG | - | chr6.1:47990-48009 | None:intergenic | 20.0% |
| !!! | CCAGTTTTTTTTTTTTTGAA+GGG | - | chr6.1:45564-45583 | None:intergenic | 20.0% |
| !!! | CTTTTTCCTAAAAAATGTTT+GGG | - | chr6.1:47812-47831 | None:intergenic | 20.0% |
| !!! | GCTATTTCATATTTACTTTT+AGG | + | chr6.1:46286-46305 | MS.gene82763:intron | 20.0% |
| !!! | TCCAGTTTTTTTTTTTTTGA+AGG | - | chr6.1:45565-45584 | None:intergenic | 20.0% |
| !!! | TCTTTTTCCTAAAAAATGTT+TGG | - | chr6.1:47813-47832 | None:intergenic | 20.0% |
| !!! | TTTTTCCTAAAAAATGTTTG+GGG | - | chr6.1:47811-47830 | None:intergenic | 20.0% |
| ! | AAATAAAAGTAAGCCAAATG+TGG | - | chr6.1:46420-46439 | None:intergenic | 25.0% |
| ! | AAATCTGTAATATATCAAGC+AGG | + | chr6.1:48320-48339 | MS.gene82763:intron | 25.0% |
| ! | AAATGGTCAGAATAAAACTT+TGG | + | chr6.1:47183-47202 | MS.gene82763:CDS | 25.0% |
| ! | AATCATTCATAAACCACATT+TGG | + | chr6.1:46404-46423 | MS.gene82763:intron | 25.0% |
| ! | AATTTATCAACTGTGTATAG+TGG | - | chr6.1:46945-46964 | None:intergenic | 25.0% |
| ! | ATGTAAAATACAAATGGTGT+TGG | + | chr6.1:48210-48229 | MS.gene82763:intron | 25.0% |
| ! | ATTAACAAGAAACATTCCAT+TGG | - | chr6.1:47866-47885 | None:intergenic | 25.0% |
| ! | ATTATATCGTAATTCATGCT+AGG | + | chr6.1:46529-46548 | MS.gene82763:intron | 25.0% |
| ! | CACTAGGATAAAAGATTATA+AGG | - | chr6.1:45969-45988 | None:intergenic | 25.0% |
| ! | CCCTTCAAAAAAAAAAAAAC+TGG | + | chr6.1:45561-45580 | MS.gene82763:intron | 25.0% |
| ! | CTTATCAGATTTAAAAGCTT+TGG | + | chr6.1:44575-44594 | MS.gene82763:intron | 25.0% |
| ! | CTTTAGATACCTATATATGT+AGG | + | chr6.1:45867-45886 | MS.gene82763:intron | 25.0% |
| ! | GATAAATTATGTTCCTTACA+AGG | + | chr6.1:46957-46976 | MS.gene82763:intron | 25.0% |
| ! | GTAGATAACAGGATATAAAA+TGG | - | chr6.1:46898-46917 | None:intergenic | 25.0% |
| ! | GTATAAGTAAAACATATGGA+TGG | + | chr6.1:45056-45075 | MS.gene82763:intron | 25.0% |
| ! | GTCGGTAAATCTAAAAAATT+TGG | + | chr6.1:47599-47618 | MS.gene82763:intron | 25.0% |
| ! | TATATCCTGTTATCTACATA+AGG | + | chr6.1:46901-46920 | MS.gene82763:intron | 25.0% |
| ! | TATCAAAAATAGAACCAAAC+AGG | - | chr6.1:47697-47716 | None:intergenic | 25.0% |
| ! | TCATGAAGTTTACCTTATTA+TGG | - | chr6.1:47068-47087 | None:intergenic | 25.0% |
| ! | TCATTGTAAACAGTAATTCT+AGG | + | chr6.1:47964-47983 | MS.gene82763:intron | 25.0% |
| ! | TTACTTAATTGTCCATTGAA+TGG | - | chr6.1:44864-44883 | None:intergenic | 25.0% |
| ! | TTGCTTCTCTCTAAATAATT+AGG | + | chr6.1:44962-44981 | MS.gene82763:intron | 25.0% |
| ! | TTTATGAATGATTGTCTCAA+AGG | - | chr6.1:46397-46416 | None:intergenic | 25.0% |
| ! | TTTGATTATGTTACTCAGAA+GGG | + | chr6.1:46192-46211 | MS.gene82763:intron | 25.0% |
| !! | ATATCTTTATTTGACAAAGC+AGG | + | chr6.1:46058-46077 | MS.gene82763:intron | 25.0% |
| !! | CAAAAATAAATTTGGTTCCA+AGG | + | chr6.1:47888-47907 | MS.gene82763:intron | 25.0% |
| !! | TTTTATTACTCCTCAAAACT+AGG | - | chr6.1:46827-46846 | None:intergenic | 25.0% |
| !! | TTTTTCCTTATGTAGATAAC+AGG | - | chr6.1:46909-46928 | None:intergenic | 25.0% |
| !!! | ATTTTTTGCTGATAAGAGAA+TGG | + | chr6.1:46743-46762 | MS.gene82763:intron | 25.0% |
| !!! | CTCAGAAATAAAAAAGTATC+TGG | - | chr6.1:45702-45721 | None:intergenic | 25.0% |
| !!! | CTTTTTTCTTTATAGGAAGT+AGG | - | chr6.1:46581-46600 | None:intergenic | 25.0% |
| !!! | GTATCTAAAGATTTGTTAGA+AGG | - | chr6.1:45857-45876 | None:intergenic | 25.0% |
| !!! | TACAAGTTTTGTTAGGAATA+TGG | - | chr6.1:46449-46468 | None:intergenic | 25.0% |
| !!! | TCAAGTTGATGATCATATAA+AGG | + | chr6.1:45384-45403 | MS.gene82763:CDS | 25.0% |
| !!! | TCTCATTTACAAGTTTTGTT+AGG | - | chr6.1:46456-46475 | None:intergenic | 25.0% |
| !!! | TGCCATTTTCTTTTTCATTT+TGG | + | chr6.1:47524-47543 | MS.gene82763:intron | 25.0% |
| !!! | TTGACTTGTATTTGTATACT+AGG | + | chr6.1:45279-45298 | MS.gene82763:intron | 25.0% |
| !!! | TTGGTTAATTGATTTGTGTT+TGG | + | chr6.1:44706-44725 | MS.gene82763:intron | 25.0% |
| !!! | TTTTGATTATGTTACTCAGA+AGG | + | chr6.1:46191-46210 | MS.gene82763:intron | 25.0% |
| !!! | TTTTTTGCTGATAAGAGAAT+GGG | + | chr6.1:46744-46763 | MS.gene82763:intron | 25.0% |
| AAAAACTGGAATGTTTCAAC+TGG | + | chr6.1:45575-45594 | MS.gene82763:intron | 30.0% | |
| AAATAAGCTAGTGAAACGAA+AGG | - | chr6.1:45240-45259 | None:intergenic | 30.0% | |
| AACAATGACTTTCTATCAGA+AGG | - | chr6.1:46026-46045 | None:intergenic | 30.0% | |
| AATAAGATCCATTCCTTGTA+AGG | - | chr6.1:46973-46992 | None:intergenic | 30.0% | |
| AATTGGAGAAAAGAACAAGA+AGG | - | chr6.1:48150-48169 | None:intergenic | 30.0% | |
| AGAAGCTGAAGAAAATATGA+TGG | + | chr6.1:48496-48515 | MS.gene82763:CDS | 30.0% | |
| AGGAATATCTAGAAATTTGG+TGG | - | chr6.1:44643-44662 | None:intergenic | 30.0% | |
| AGGAGGAATATCTAGAAATT+TGG | - | chr6.1:44646-44665 | None:intergenic | 30.0% | |
| AGGATCTAAACTTCTGATTA+GGG | + | chr6.1:46078-46097 | MS.gene82763:intron | 30.0% | |
| ATTATGTTCCTTACAAGGAA+TGG | + | chr6.1:46962-46981 | MS.gene82763:intron | 30.0% | |
| ATTCTTGTAGCTGACAAAAA+TGG | + | chr6.1:47166-47185 | MS.gene82763:CDS | 30.0% | |
| ATTGGAGAAAAGAACAAGAA+GGG | - | chr6.1:48149-48168 | None:intergenic | 30.0% | |
| ATTGTTTCAGTAGCAATGAT+AGG | - | chr6.1:45364-45383 | None:intergenic | 30.0% | |
| ATTTAGTGATGTTGTAACTC+AGG | + | chr6.1:48404-48423 | MS.gene82763:intron | 30.0% | |
| CACCTAATATGTACCTTATT+AGG | - | chr6.1:46654-46673 | None:intergenic | 30.0% | |
| CTAATATGTACCTTATTAGG+AGG | - | chr6.1:46651-46670 | None:intergenic | 30.0% | |
| CTCACTGTGCAAAAAATAAA+CGG | + | chr6.1:46602-46621 | MS.gene82763:intron | 30.0% | |
| CTCCTAATAAGGTACATATT+AGG | + | chr6.1:46649-46668 | MS.gene82763:intron | 30.0% | |
| CTGAAGAATCTTATCAGTAT+AGG | - | chr6.1:47578-47597 | None:intergenic | 30.0% | |
| CTGAATAAGAAAAGCTCTTA+GGG | - | chr6.1:45995-46014 | None:intergenic | 30.0% | |
| CTTGTATTTGTATACTAGGA+TGG | + | chr6.1:45283-45302 | MS.gene82763:intron | 30.0% | |
| GGAATATCTAGAAATTTGGT+GGG | - | chr6.1:44642-44661 | None:intergenic | 30.0% | |
| TAAAATGGAGTGAGCATAAA+AGG | - | chr6.1:46883-46902 | None:intergenic | 30.0% | |
| TCTGAATAAGAAAAGCTCTT+AGG | - | chr6.1:45996-46015 | None:intergenic | 30.0% | |
| TTTGTGTTTGGATACATTGA+CGG | + | chr6.1:44718-44737 | MS.gene82763:intron | 30.0% | |
| ! | ACTTTATCTGAAATCATCTC+AGG | + | chr6.1:45091-45110 | MS.gene82763:intron | 30.0% |
| ! | GCATGAGCTTTGTATATAAA+GGG | + | chr6.1:48118-48137 | MS.gene82763:intron | 30.0% |
| ! | TCTGTTTGCTACAAAGTAAA+AGG | + | chr6.1:45424-45443 | MS.gene82763:intron | 30.0% |
| ! | TGCATGAGCTTTGTATATAA+AGG | + | chr6.1:48117-48136 | MS.gene82763:intron | 30.0% |
| ! | TTTTCAGAGTAGTTCTCTTT+CGG | - | chr6.1:47490-47509 | None:intergenic | 30.0% |
| !! | ACAAGGAATGGATCTTATTT+TGG | + | chr6.1:46974-46993 | MS.gene82763:intron | 30.0% |
| !! | CTAAAGATTTGTTAGAAGGA+GGG | - | chr6.1:45853-45872 | None:intergenic | 30.0% |
| !! | TATTTCTGAAACCATAGTGA+TGG | + | chr6.1:46318-46337 | MS.gene82763:intron | 30.0% |
| !! | TCTAAAGATTTGTTAGAAGG+AGG | - | chr6.1:45854-45873 | None:intergenic | 30.0% |
| !!! | AAGTTTTGTTAGGAATATGG+AGG | - | chr6.1:46446-46465 | None:intergenic | 30.0% |
| !!! | AGTGAGGCTTTTTTCTTTAT+AGG | - | chr6.1:46588-46607 | None:intergenic | 30.0% |
| !!! | TTTTGCTACTTTATGCAGAT+AGG | + | chr6.1:46997-47016 | MS.gene82763:intron | 30.0% |
| AAGATTTCCTTCCAAGTTAG+AGG | + | chr6.1:47829-47848 | MS.gene82763:intron | 35.0% | |
| AAGCATACAAACGTTAGAAG+TGG | - | chr6.1:45212-45231 | None:intergenic | 35.0% | |
| AAGTGTGTGCATTCACAATT+TGG | - | chr6.1:48261-48280 | None:intergenic | 35.0% | |
| AATCAGGTGCCTACATATAT+AGG | - | chr6.1:45879-45898 | None:intergenic | 35.0% | |
| ACACCAATTTGTAGCTTCTA+CGG | - | chr6.1:44934-44953 | None:intergenic | 35.0% | |
| ACTGCTGCATATTATGTTGA+GGG | + | chr6.1:45622-45641 | MS.gene82763:intron | 35.0% | |
| AGATCATGTATATGCAAAGC+CGG | + | chr6.1:45720-45739 | MS.gene82763:intron | 35.0% | |
| AGATGATTCAAAGGCTACAT+TGG | + | chr6.1:46150-46169 | MS.gene82763:CDS | 35.0% | |
| AGCATCTGTTCTCCATAATA+AGG | + | chr6.1:47053-47072 | MS.gene82763:CDS | 35.0% | |
| AGGTAAAAATGAGTCTTGAG+AGG | + | chr6.1:44982-45001 | MS.gene82763:intron | 35.0% | |
| AGGTATGATTATTCTCTCCA+TGG | + | chr6.1:45921-45940 | MS.gene82763:intron | 35.0% | |
| ATACTACTAAGCCGATGTTT+GGG | - | chr6.1:45040-45059 | None:intergenic | 35.0% | |
| ATAGAACCAAACAGGACAAA+AGG | - | chr6.1:47689-47708 | None:intergenic | 35.0% | |
| ATCAAAACCAACACTACCTT+TGG | - | chr6.1:46178-46197 | None:intergenic | 35.0% | |
| ATGAAAACACACACATACAC+CGG | - | chr6.1:45742-45761 | None:intergenic | 35.0% | |
| ATGTAGCCTTTGAATCATCT+TGG | - | chr6.1:46150-46169 | None:intergenic | 35.0% | |
| ATGTTTCACTCGGTCATTAT+AGG | + | chr6.1:45769-45788 | MS.gene82763:intron | 35.0% | |
| ATTATCGTCATGCAAAGAGA+TGG | - | chr6.1:46367-46386 | None:intergenic | 35.0% | |
| ATTGAACTGCACACTTTCAT+GGG | - | chr6.1:47239-47258 | None:intergenic | 35.0% | |
| CAAAAGGTAGGCATCTAAAA+TGG | - | chr6.1:47673-47692 | None:intergenic | 35.0% | |
| CACAGTGATTTCAGTTACAT+TGG | - | chr6.1:48085-48104 | None:intergenic | 35.0% | |
| CAGGATCTAAACTTCTGATT+AGG | + | chr6.1:46077-46096 | MS.gene82763:intron | 35.0% | |
| CTGATAAGATTCTTCAGTGT+CGG | + | chr6.1:47581-47600 | MS.gene82763:intron | 35.0% | |
| CTTGAACTTATTGCTTGTGT+TGG | + | chr6.1:46720-46739 | MS.gene82763:intron | 35.0% | |
| CTTGAGCTTCTGTTTCATAA+AGG | + | chr6.1:45901-45920 | MS.gene82763:CDS | 35.0% | |
| GAGATGAAAAGTAGTACATC+AGG | + | chr6.1:46483-46502 | MS.gene82763:intron | 35.0% | |
| TACTGCTGCATATTATGTTG+AGG | + | chr6.1:45621-45640 | MS.gene82763:intron | 35.0% | |
| TATACTACTAAGCCGATGTT+TGG | - | chr6.1:45041-45060 | None:intergenic | 35.0% | |
| TCAATTTCAAGATGTAACCC+AGG | - | chr6.1:48185-48204 | None:intergenic | 35.0% | |
| TCACATACTAACAAGATCCA+TGG | - | chr6.1:47774-47793 | None:intergenic | 35.0% | |
| TCTAGCTGATCCATCAAAAA+TGG | - | chr6.1:46113-46132 | None:intergenic | 35.0% | |
| TCTATTCATTTCTTGCTTGC+AGG | + | chr6.1:44545-44564 | MS.gene82763:intron | 35.0% | |
| TCTTTATAGGAAGTAGGACT+GGG | - | chr6.1:46575-46594 | None:intergenic | 35.0% | |
| TGAAGTTTCAGTTATCACTG+CGG | + | chr6.1:47354-47373 | MS.gene82763:intron | 35.0% | |
| TGAATGAATGACTAACCAGA+AGG | - | chr6.1:44666-44685 | None:intergenic | 35.0% | |
| TGATGTTGTAACTCAGGTAT+TGG | + | chr6.1:48410-48429 | MS.gene82763:intron | 35.0% | |
| TGCATTTGTCAATAGTGCAT+TGG | + | chr6.1:47273-47292 | MS.gene82763:CDS | 35.0% | |
| TGCTACAAAGTAAAAGGTCT+GGG | + | chr6.1:45430-45449 | MS.gene82763:intron | 35.0% | |
| TGTAGCCTTTGAATCATCTT+GGG | - | chr6.1:46149-46168 | None:intergenic | 35.0% | |
| TTATGTTGTGTACAGAGTCA+GGG | + | chr6.1:44188-44207 | MS.gene82763:CDS | 35.0% | |
| TTCGGTTTCCTAACATAGAT+TGG | - | chr6.1:47472-47491 | None:intergenic | 35.0% | |
| TTCTTTATAGGAAGTAGGAC+TGG | - | chr6.1:46576-46595 | None:intergenic | 35.0% | |
| TTGCTACAAAGTAAAAGGTC+TGG | + | chr6.1:45429-45448 | MS.gene82763:intron | 35.0% | |
| TTGCTCTATTCTGTTCTCTT+TGG | + | chr6.1:47642-47661 | MS.gene82763:intron | 35.0% | |
| TTTCTAGATATTCCTCCTTC+TGG | + | chr6.1:44648-44667 | MS.gene82763:CDS | 35.0% | |
| ! | AATACAAATGGTGTTGGACA+AGG | + | chr6.1:48216-48235 | MS.gene82763:intron | 35.0% |
| ! | AGCTGTGACACAACAATTTT+AGG | + | chr6.1:47105-47124 | MS.gene82763:intron | 35.0% |
| ! | CATAGATTGGTCCTAGAAAT+TGG | - | chr6.1:47459-47478 | None:intergenic | 35.0% |
| ! | TAGGATGGTGTTAAAGAAAC+TGG | + | chr6.1:45298-45317 | MS.gene82763:intron | 35.0% |
| ! | TCTTCTTATCGCTGTGTTTT+TGG | + | chr6.1:44687-44706 | MS.gene82763:intron | 35.0% |
| !! | CTAGAAATTGGCTTGGTATA+CGG | - | chr6.1:47447-47466 | None:intergenic | 35.0% |
| !! | GAACTTCCATCCATTTTTGA+TGG | + | chr6.1:46100-46119 | MS.gene82763:CDS | 35.0% |
| !! | TTCTAGGACCAATCTATGTT+AGG | + | chr6.1:47461-47480 | MS.gene82763:intron | 35.0% |
| !! | TTTAGGTTCGTGCATTTTCA+GGG | + | chr6.1:47122-47141 | MS.gene82763:intron | 35.0% |
| !!! | AACATTGAGTCCTAGTTTTG+AGG | + | chr6.1:46814-46833 | MS.gene82763:intron | 35.0% |
| !!! | CGTTTATTTTTTGCACAGTG+AGG | - | chr6.1:46604-46623 | None:intergenic | 35.0% |
| !!! | CTTTGCCCCAAACATTTTTT+AGG | + | chr6.1:47803-47822 | MS.gene82763:intron | 35.0% |
| !!! | TTTTAGGTTCGTGCATTTTC+AGG | + | chr6.1:47121-47140 | MS.gene82763:intron | 35.0% |
| AAAACTTTCACTCTCTCCCT+TGG | + | chr6.1:44385-44404 | MS.gene82763:CDS | 40.0% | |
| AAAGATAGCCATGATTCGTC+TGG | - | chr6.1:47024-47043 | None:intergenic | 40.0% | |
| AAAGCTCTTAGGGTAACACT+AGG | - | chr6.1:45985-46004 | None:intergenic | 40.0% | |
| AACAGAAGCTCAAGCAAATC+AGG | - | chr6.1:45895-45914 | None:intergenic | 40.0% | |
| AACCAAACAGGACAAAAGGT+AGG | - | chr6.1:47685-47704 | None:intergenic | 40.0% | |
| AACTGGAATGTTTCAACTGG+TGG | + | chr6.1:45578-45597 | MS.gene82763:intron | 40.0% | |
| AAGAAACCCGTTGTTCTGTT+GGG | + | chr6.1:44242-44261 | MS.gene82763:CDS | 40.0% | |
| ACAACCCCAAGATGATTCAA+AGG | + | chr6.1:46141-46160 | MS.gene82763:CDS | 40.0% | |
| AGGACTATAGTAGACACTTG+AGG | - | chr6.1:44272-44291 | None:intergenic | 40.0% | |
| ATGAATGACTAACCAGAAGG+AGG | - | chr6.1:44663-44682 | None:intergenic | 40.0% | |
| ATTGGTCCTAGAAATTGGCT+TGG | - | chr6.1:47454-47473 | None:intergenic | 40.0% | |
| ATTTCCACCTCTAACTTGGA+AGG | - | chr6.1:47839-47858 | None:intergenic | 40.0% | |
| ATTTCCTTCCAAGTTAGAGG+TGG | + | chr6.1:47832-47851 | MS.gene82763:intron | 40.0% | |
| CATAGCTGTCATGTTTCACT+CGG | + | chr6.1:45759-45778 | MS.gene82763:intron | 40.0% | |
| CATTGAACTGCACACTTTCA+TGG | - | chr6.1:47240-47259 | None:intergenic | 40.0% | |
| CGTATACCAAGCCAATTTCT+AGG | + | chr6.1:47445-47464 | MS.gene82763:intron | 40.0% | |
| CTACAAAGTAAAAGGTCTGG+GGG | + | chr6.1:45432-45451 | MS.gene82763:intron | 40.0% | |
| CTACCAGAAAACACTTGTCT+AGG | - | chr6.1:47401-47420 | None:intergenic | 40.0% | |
| GACAATAGCAGCAACTTCAA+AGG | - | chr6.1:44333-44352 | None:intergenic | 40.0% | |
| GATAGATTGGCAAAAGGCTA+GGG | - | chr6.1:45132-45151 | None:intergenic | 40.0% | |
| GATGGCTCAAAAATGCAACA+AGG | + | chr6.1:46336-46355 | MS.gene82763:intron | 40.0% | |
| GCAACTTCAAAGGAAGAATG+TGG | - | chr6.1:44323-44342 | None:intergenic | 40.0% | |
| GCTACAAAGTAAAAGGTCTG+GGG | + | chr6.1:45431-45450 | MS.gene82763:intron | 40.0% | |
| GCTGATCCATCAAAAATGGA+TGG | - | chr6.1:46109-46128 | None:intergenic | 40.0% | |
| GGAACCTCAGTTATGCATTA+CGG | + | chr6.1:44596-44615 | MS.gene82763:CDS | 40.0% | |
| GTAGCCTTTGAATCATCTTG+GGG | - | chr6.1:46148-46167 | None:intergenic | 40.0% | |
| GTTATGTTGTGTACAGAGTC+AGG | + | chr6.1:44187-44206 | MS.gene82763:CDS | 40.0% | |
| TATTAGGTGCAAGAGCTGTA+AGG | + | chr6.1:46665-46684 | MS.gene82763:intron | 40.0% | |
| TCAGAACACACCTCCTAATA+AGG | + | chr6.1:46638-46657 | MS.gene82763:intron | 40.0% | |
| TCAGTATAGGAACAAGCAAG+AGG | - | chr6.1:47565-47584 | None:intergenic | 40.0% | |
| TCTCATTTCCACCTCTAACT+TGG | - | chr6.1:47843-47862 | None:intergenic | 40.0% | |
| TGGCATGAGATGAAGGAAAA+CGG | - | chr6.1:45192-45211 | None:intergenic | 40.0% | |
| TGTTGTGGTGAAAGTAGAAG+TGG | - | chr6.1:44216-44235 | None:intergenic | 40.0% | |
| TTAGAAGTGGCATGAGATGA+AGG | - | chr6.1:45199-45218 | None:intergenic | 40.0% | |
| TTATGCATTACGGCTGCTTA+TGG | + | chr6.1:44606-44625 | MS.gene82763:CDS | 40.0% | |
| TTGCCGTAGAAGCTACAAAT+TGG | + | chr6.1:44928-44947 | MS.gene82763:intron | 40.0% | |
| ! | AGAATCTTTGCTCTAGATCC+TGG | - | chr6.1:47151-47170 | None:intergenic | 40.0% |
| ! | ATTGGTGTTTCCATGTGGAA+GGG | + | chr6.1:47291-47310 | MS.gene82763:CDS | 40.0% |
| ! | GGGTTTCTTCTTGTTTGTTG+TGG | - | chr6.1:44231-44250 | None:intergenic | 40.0% |
| ! | GTGCTTTTGTGGATGCAAAT+TGG | + | chr6.1:45012-45031 | MS.gene82763:intron | 40.0% |
| !! | AGACAAGTGTTTTCTGGTAG+AGG | + | chr6.1:47401-47420 | MS.gene82763:intron | 40.0% |
| !! | GACAAGTGTTTTCTGGTAGA+GGG | + | chr6.1:47402-47421 | MS.gene82763:intron | 40.0% |
| !! | GCATTTTTGAGCCATCACTA+TGG | - | chr6.1:46332-46351 | None:intergenic | 40.0% |
| !! | TAACAGTCAAAAGAGCACCT+TGG | - | chr6.1:47908-47927 | None:intergenic | 40.0% |
| AAAGGCTACATTGGCACCAA+AGG | + | chr6.1:46159-46178 | MS.gene82763:CDS | 45.0% | |
| AACTACACATACCTCGAGTG+TGG | - | chr6.1:47320-47339 | None:intergenic | 45.0% | |
| ACCTGCAATGCTCTTTGAAC+TGG | - | chr6.1:45166-45185 | None:intergenic | 45.0% | |
| ACTTCAGCTCCCTGGAAAAA+AGG | + | chr6.1:48434-48453 | MS.gene82763:CDS | 45.0% | |
| AGAATGTGGAGAAGCAGAAG+CGG | - | chr6.1:44309-44328 | None:intergenic | 45.0% | |
| AGAGGTGGAAATGAGACCAA+TGG | + | chr6.1:47847-47866 | MS.gene82763:intron | 45.0% | |
| AGAGTGAGTGAGCGAGTAAT+TGG | - | chr6.1:44528-44547 | None:intergenic | 45.0% | |
| AGATAGGTCCAGACGAATCA+TGG | + | chr6.1:47013-47032 | MS.gene82763:intron | 45.0% | |
| ATTACATCTCCAGCACGTTG+AGG | - | chr6.1:44458-44477 | None:intergenic | 45.0% | |
| ATTGGCACCAAAGGTAGTGT+TGG | + | chr6.1:46168-46187 | MS.gene82763:intron | 45.0% | |
| CACCACGATAGATTGGCAAA+AGG | - | chr6.1:45138-45157 | None:intergenic | 45.0% | |
| CGATAGATTGGCAAAAGGCT+AGG | - | chr6.1:45133-45152 | None:intergenic | 45.0% | |
| CGTAATTCATGCTAGGACGT+GGG | + | chr6.1:46536-46555 | MS.gene82763:intron | 45.0% | |
| GAAGAAACCCGTTGTTCTGT+TGG | + | chr6.1:44241-44260 | MS.gene82763:CDS | 45.0% | |
| GCAAATTGGCACCCAAACAT+CGG | + | chr6.1:45026-45045 | MS.gene82763:intron | 45.0% | |
| GCACACACTCTCTTCTCATA+TGG | + | chr6.1:45796-45815 | MS.gene82763:intron | 45.0% | |
| GCATTGGGCAAACACTATAG+AGG | - | chr6.1:46268-46287 | None:intergenic | 45.0% | |
| GCCAACTTTGCTCTTGAAAG+AGG | + | chr6.1:44407-44426 | MS.gene82763:CDS | 45.0% | |
| GCCTCTTTCAAGAGCAAAGT+TGG | - | chr6.1:44411-44430 | None:intergenic | 45.0% | |
| GTAATTCATGCTAGGACGTG+GGG | + | chr6.1:46537-46556 | MS.gene82763:intron | 45.0% | |
| TCAAGAGCAAAGTTGGCCAA+GGG | - | chr6.1:44404-44423 | None:intergenic | 45.0% | |
| TCGTAATTCATGCTAGGACG+TGG | + | chr6.1:46535-46554 | MS.gene82763:intron | 45.0% | |
| TTCAAGAGCAAAGTTGGCCA+AGG | - | chr6.1:44405-44424 | None:intergenic | 45.0% | |
| TTTGCCTCTGTCTCTTCTAG+CGG | - | chr6.1:44366-44385 | None:intergenic | 45.0% | |
| ! | AATGCAGCTGCTTTCTGGAA+TGG | + | chr6.1:48462-48481 | MS.gene82763:CDS | 45.0% |
| ! | AGCCTTTTGCCAATCTATCG+TGG | + | chr6.1:45133-45152 | MS.gene82763:CDS | 45.0% |
| ! | AGTGCATTGGTGTTTCCATG+TGG | + | chr6.1:47286-47305 | MS.gene82763:CDS | 45.0% |
| ! | ATGAGAAGAGAGTGTGTGCA+AGG | - | chr6.1:45795-45814 | None:intergenic | 45.0% |
| ! | ATTTTCACTCCTCAACGTGC+TGG | + | chr6.1:44446-44465 | MS.gene82763:intron | 45.0% |
| ! | CATTGGTGTTTCCATGTGGA+AGG | + | chr6.1:47290-47309 | MS.gene82763:CDS | 45.0% |
| ! | CTGCCTAGACAAGTGTTTTC+TGG | + | chr6.1:47395-47414 | MS.gene82763:intron | 45.0% |
| ! | TGCCTACCTTTTGTCCTGTT+TGG | + | chr6.1:47680-47699 | MS.gene82763:intron | 45.0% |
| ! | TTGGTGTTTCCATGTGGAAG+GGG | + | chr6.1:47292-47311 | MS.gene82763:CDS | 45.0% |
| ! | TTTTCTTCAGCTTCTGTCCC+CGG | - | chr6.1:48491-48510 | None:intergenic | 45.0% |
| !! | ACATGGCCTTTTCTTGGTGT+CGG | + | chr6.1:45456-45475 | MS.gene82763:intron | 45.0% |
| !! | GAGGTTTTGTCGTGCTTTTG+TGG | + | chr6.1:45001-45020 | MS.gene82763:intron | 45.0% |
| !! | TCCAGTTCAAAGAGCATTGC+AGG | + | chr6.1:45162-45181 | MS.gene82763:CDS | 45.0% |
| !! | TGTTTTCTGGTAGAGGGTAC+AGG | + | chr6.1:47408-47427 | MS.gene82763:intron | 45.0% |
| !!! | CATTGACCGCCTTTTTTCCA+GGG | - | chr6.1:48446-48465 | None:intergenic | 45.0% |
| ACTGTTCGTGCACTTGATGC+TGG | + | chr6.1:45337-45356 | MS.gene82763:CDS | 50.0% | |
| GAAGTAGGACTGGGAACACA+AGG | - | chr6.1:46566-46585 | None:intergenic | 50.0% | |
| GACAAGGCGACAATGTCTTC+AGG | + | chr6.1:48232-48251 | MS.gene82763:intron | 50.0% | |
| GCAGCCGTAATGCATAACTG+AGG | - | chr6.1:44603-44622 | None:intergenic | 50.0% | |
| GTATTGGAACTTCAGCTCCC+TGG | + | chr6.1:48426-48445 | MS.gene82763:CDS | 50.0% | |
| TCAGCTCCCTGGAAAAAAGG+CGG | + | chr6.1:48437-48456 | MS.gene82763:CDS | 50.0% | |
| TTGCCTCTGTCTCTTCTAGC+GGG | - | chr6.1:44365-44384 | None:intergenic | 50.0% | |
| ! | AACAAGATCCATGGCGCTGA+AGG | - | chr6.1:47765-47784 | None:intergenic | 50.0% |
| !! | AGGTTCGTGCATTTTCAGGG+TGG | + | chr6.1:47125-47144 | MS.gene82763:intron | 50.0% |
| !! | GTAGTGCCGACACCAAGAAA+AGG | - | chr6.1:45465-45484 | None:intergenic | 50.0% |
| !!! | GCATTGACCGCCTTTTTTCC+AGG | - | chr6.1:48447-48466 | None:intergenic | 50.0% |
| AGGTGCGCCCAACAGAACAA+CGG | - | chr6.1:44252-44271 | None:intergenic | 55.0% | |
| AGTGTGGTTCCCCTTCCACA+TGG | - | chr6.1:47304-47323 | None:intergenic | 55.0% | |
| GGAGCAGCACCACGATAGAT+TGG | - | chr6.1:45145-45164 | None:intergenic | 55.0% | |
| TTCATGGGTGCAAACTCGCG+TGG | - | chr6.1:47224-47243 | None:intergenic | 55.0% | |
| ! | AAGCGGTGAGAAGTGCATCG+AGG | - | chr6.1:44292-44311 | None:intergenic | 55.0% |
| ! | CATGGCGCTGAAGGTAGCAT+CGG | - | chr6.1:47756-47775 | None:intergenic | 55.0% |
| ! | CGGTCAATGCAGCTGCTTTC+TGG | + | chr6.1:48457-48476 | MS.gene82763:CDS | 55.0% |
| ! | GTAAAAGGTCTGGGGGCACA+TGG | + | chr6.1:45439-45458 | MS.gene82763:intron | 55.0% |
| !! | CTGCTTTCTGGAATGGCCTC+CGG | + | chr6.1:48469-48488 | MS.gene82763:CDS | 55.0% |
| !! | TGCTTTCTGGAATGGCCTCC+GGG | + | chr6.1:48470-48489 | MS.gene82763:CDS | 55.0% |
| CCACCCGCTAGAAGAGACAG+AGG | + | chr6.1:44359-44378 | MS.gene82763:CDS | 60.0% | |
| CCTCTGTCTCTTCTAGCGGG+TGG | - | chr6.1:44362-44381 | None:intergenic | 60.0% | |
| CGATGCTACCTTCAGCGCCA+TGG | + | chr6.1:47754-47773 | MS.gene82763:intron | 60.0% | |
| GGTGCGCCCAACAGAACAAC+GGG | - | chr6.1:44251-44270 | None:intergenic | 60.0% | |
| TCTTCAGCTTCTGTCCCCGG+AGG | - | chr6.1:48488-48507 | None:intergenic | 60.0% | |
| TGGAAGGGGAACCACACTCG+AGG | + | chr6.1:47306-47325 | MS.gene82763:CDS | 60.0% | |
| ! | GCGCTGAAGGTAGCATCGGA+TGG | - | chr6.1:47752-47771 | None:intergenic | 60.0% |
| !! | CGTGCATTTTCAGGGTGGCC+AGG | + | chr6.1:47130-47149 | MS.gene82763:CDS | 60.0% |
| !! | GCTTTCTGGAATGGCCTCCG+GGG | + | chr6.1:48471-48490 | MS.gene82763:CDS | 60.0% |
| !! | GGGGGCACATGGCCTTTTCT+TGG | + | chr6.1:45450-45469 | MS.gene82763:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 44176 | 48515 | 44176 | ID=MS.gene82763 |
| chr6.1 | mRNA | 44176 | 48515 | 44176 | ID=MS.gene82763.t1;Parent=MS.gene82763 |
| chr6.1 | exon | 44176 | 44461 | 44176 | ID=MS.gene82763.t1.exon1;Parent=MS.gene82763.t1 |
| chr6.1 | CDS | 44176 | 44461 | 44176 | ID=cds.MS.gene82763.t1;Parent=MS.gene82763.t1 |
| chr6.1 | exon | 44583 | 44669 | 44583 | ID=MS.gene82763.t1.exon2;Parent=MS.gene82763.t1 |
| chr6.1 | CDS | 44583 | 44669 | 44583 | ID=cds.MS.gene82763.t1;Parent=MS.gene82763.t1 |
| chr6.1 | exon | 45113 | 45183 | 45113 | ID=MS.gene82763.t1.exon3;Parent=MS.gene82763.t1 |
| chr6.1 | CDS | 45113 | 45183 | 45113 | ID=cds.MS.gene82763.t1;Parent=MS.gene82763.t1 |
| chr6.1 | exon | 45301 | 45405 | 45301 | ID=MS.gene82763.t1.exon4;Parent=MS.gene82763.t1 |
| chr6.1 | CDS | 45301 | 45405 | 45301 | ID=cds.MS.gene82763.t1;Parent=MS.gene82763.t1 |
| chr6.1 | exon | 45889 | 45922 | 45889 | ID=MS.gene82763.t1.exon5;Parent=MS.gene82763.t1 |
| chr6.1 | CDS | 45889 | 45922 | 45889 | ID=cds.MS.gene82763.t1;Parent=MS.gene82763.t1 |
| chr6.1 | exon | 46080 | 46180 | 46080 | ID=MS.gene82763.t1.exon6;Parent=MS.gene82763.t1 |
| chr6.1 | CDS | 46080 | 46180 | 46080 | ID=cds.MS.gene82763.t1;Parent=MS.gene82763.t1 |
| chr6.1 | exon | 47015 | 47074 | 47015 | ID=MS.gene82763.t1.exon7;Parent=MS.gene82763.t1 |
| chr6.1 | CDS | 47015 | 47074 | 47015 | ID=cds.MS.gene82763.t1;Parent=MS.gene82763.t1 |
| chr6.1 | exon | 47127 | 47327 | 47127 | ID=MS.gene82763.t1.exon8;Parent=MS.gene82763.t1 |
| chr6.1 | CDS | 47127 | 47327 | 47127 | ID=cds.MS.gene82763.t1;Parent=MS.gene82763.t1 |
| chr6.1 | exon | 48426 | 48515 | 48426 | ID=MS.gene82763.t1.exon9;Parent=MS.gene82763.t1 |
| chr6.1 | CDS | 48426 | 48515 | 48426 | ID=cds.MS.gene82763.t1;Parent=MS.gene82763.t1 |
| Gene Sequence |
| Protein sequence |
