Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83227.t1 | KEH38015.1 | 95.4 | 261 | 9 | 2 | 1 | 260 | 1 | 259 | 1.20E-134 | 489.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83227.t1 | O22227 | 52.8 | 176 | 72 | 4 | 93 | 260 | 125 | 297 | 4.4e-45 | 183.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83227.t1 | A0A072VIN3 | 95.4 | 261 | 9 | 2 | 1 | 260 | 1 | 259 | 8.6e-135 | 489.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene83227 | 0.816807 | 4.57E-52 | -1.69E-46 |
MS.gene049368 | MS.gene83227 | 0.832413 | 9.59E-56 | -1.69E-46 |
MS.gene049672 | MS.gene83227 | 0.807024 | 6.18E-50 | -1.69E-46 |
MS.gene050689 | MS.gene83227 | 0.831288 | 1.82E-55 | -1.69E-46 |
MS.gene050901 | MS.gene83227 | 0.806194 | 9.26E-50 | -1.69E-46 |
MS.gene05157 | MS.gene83227 | 0.820387 | 7.05E-53 | -1.69E-46 |
MS.gene051664 | MS.gene83227 | 0.807532 | 4.83E-50 | -1.69E-46 |
MS.gene051719 | MS.gene83227 | 0.803372 | 3.60E-49 | -1.69E-46 |
MS.gene051720 | MS.gene83227 | 0.815978 | 7.01E-52 | -1.69E-46 |
MS.gene052516 | MS.gene83227 | 0.820976 | 5.16E-53 | -1.69E-46 |
MS.gene053144 | MS.gene83227 | 0.811497 | 6.80E-51 | -1.69E-46 |
MS.gene053226 | MS.gene83227 | 0.802631 | 5.12E-49 | -1.69E-46 |
MS.gene053536 | MS.gene83227 | 0.805211 | 1.49E-49 | -1.69E-46 |
MS.gene053538 | MS.gene83227 | 0.805702 | 1.17E-49 | -1.69E-46 |
MS.gene05364 | MS.gene83227 | 0.833298 | 5.78E-56 | -1.69E-46 |
MS.gene054142 | MS.gene83227 | 0.813572 | 2.39E-51 | -1.69E-46 |
MS.gene054584 | MS.gene83227 | 0.802716 | 4.92E-49 | -1.69E-46 |
MS.gene055144 | MS.gene83227 | 0.80956 | 1.78E-50 | -1.69E-46 |
MS.gene055465 | MS.gene83227 | 0.813187 | 2.91E-51 | -1.69E-46 |
MS.gene055466 | MS.gene83227 | 0.818027 | 2.43E-52 | -1.69E-46 |
MS.gene055468 | MS.gene83227 | 0.803038 | 4.22E-49 | -1.69E-46 |
MS.gene055513 | MS.gene83227 | 0.814456 | 1.53E-51 | -1.69E-46 |
MS.gene056215 | MS.gene83227 | 0.802495 | 5.46E-49 | -1.69E-46 |
MS.gene056308 | MS.gene83227 | 0.828191 | 1.03E-54 | -1.69E-46 |
MS.gene05894 | MS.gene83227 | 0.802989 | 4.32E-49 | -1.69E-46 |
MS.gene059778 | MS.gene83227 | 0.80869 | 2.74E-50 | -1.69E-46 |
MS.gene05978 | MS.gene83227 | 0.819069 | 1.41E-52 | -1.69E-46 |
MS.gene060519 | MS.gene83227 | 0.802093 | 6.61E-49 | -1.69E-46 |
MS.gene060587 | MS.gene83227 | 0.802717 | 4.91E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83227.t1 | MTR_2g055990 | 95.402 | 261 | 9 | 2 | 1 | 260 | 1 | 259 | 0.0 | 514 |
MS.gene83227.t1 | MTR_4g112370 | 74.902 | 255 | 51 | 5 | 8 | 260 | 17 | 260 | 8.52e-130 | 368 |
MS.gene83227.t1 | MTR_2g054380 | 68.852 | 183 | 55 | 2 | 78 | 260 | 90 | 270 | 1.21e-84 | 254 |
MS.gene83227.t1 | MTR_1g053130 | 58.382 | 173 | 67 | 2 | 93 | 260 | 112 | 284 | 4.57e-59 | 189 |
MS.gene83227.t1 | MTR_3g094830 | 44.643 | 168 | 88 | 4 | 94 | 260 | 96 | 259 | 1.37e-47 | 159 |
MS.gene83227.t1 | MTR_8g040690 | 43.787 | 169 | 87 | 4 | 94 | 260 | 85 | 247 | 2.22e-46 | 155 |
MS.gene83227.t1 | MTR_8g040680 | 43.195 | 169 | 88 | 4 | 94 | 260 | 95 | 257 | 2.47e-44 | 150 |
MS.gene83227.t1 | MTR_3g101300 | 45.000 | 180 | 89 | 5 | 86 | 259 | 60 | 235 | 3.27e-44 | 149 |
MS.gene83227.t1 | MTR_7g064810 | 45.732 | 164 | 82 | 4 | 97 | 259 | 65 | 222 | 5.77e-39 | 135 |
MS.gene83227.t1 | MTR_3g086740 | 36.723 | 177 | 103 | 5 | 87 | 259 | 71 | 242 | 5.89e-32 | 118 |
MS.gene83227.t1 | MTR_8g089865 | 37.576 | 165 | 96 | 5 | 99 | 259 | 59 | 220 | 1.35e-29 | 111 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83227.t1 | AT5G23100 | 56.338 | 284 | 89 | 6 | 4 | 260 | 2 | 277 | 1.13e-93 | 277 |
MS.gene83227.t1 | AT3G25640 | 53.208 | 265 | 107 | 5 | 4 | 260 | 12 | 267 | 1.37e-79 | 241 |
MS.gene83227.t1 | AT3G25640 | 53.462 | 260 | 104 | 5 | 9 | 260 | 43 | 293 | 1.73e-79 | 241 |
MS.gene83227.t1 | AT2G41660 | 53.409 | 176 | 71 | 4 | 93 | 260 | 125 | 297 | 4.05e-59 | 189 |
MS.gene83227.t1 | AT4G39610 | 44.186 | 172 | 88 | 2 | 95 | 260 | 95 | 264 | 2.98e-51 | 168 |
MS.gene83227.t1 | AT5G06990 | 47.727 | 176 | 79 | 4 | 94 | 260 | 90 | 261 | 8.43e-50 | 164 |
MS.gene83227.t1 | AT2G21990 | 45.509 | 167 | 87 | 2 | 94 | 260 | 90 | 252 | 1.26e-49 | 164 |
MS.gene83227.t1 | AT2G37880 | 46.988 | 166 | 83 | 3 | 97 | 259 | 81 | 244 | 3.53e-45 | 152 |
MS.gene83227.t1 | AT5G42680 | 47.239 | 163 | 79 | 4 | 99 | 259 | 79 | 236 | 3.44e-43 | 147 |
MS.gene83227.t1 | AT5G42680 | 47.239 | 163 | 79 | 4 | 99 | 259 | 79 | 236 | 3.44e-43 | 147 |
MS.gene83227.t1 | AT1G21050 | 42.945 | 163 | 84 | 3 | 99 | 259 | 89 | 244 | 3.23e-39 | 137 |
MS.gene83227.t1 | AT1G21050 | 42.945 | 163 | 84 | 3 | 99 | 259 | 125 | 280 | 5.81e-39 | 137 |
MS.gene83227.t1 | AT5G65340 | 42.012 | 169 | 86 | 4 | 99 | 259 | 85 | 249 | 4.15e-34 | 124 |
MS.gene83227.t1 | AT1G76610 | 44.048 | 168 | 77 | 4 | 94 | 259 | 73 | 225 | 5.25e-34 | 123 |
MS.gene83227.t1 | AT2G22460 | 40.491 | 163 | 90 | 3 | 97 | 258 | 85 | 241 | 4.48e-30 | 113 |
Find 62 sgRNAs with CRISPR-Local
Find 70 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCGAACACGCCTTTCGGCCT+TGG | 0.280876 | 2.4:+34715012 | MS.gene83227:CDS |
TTGGTTCGCGAAATGGCATC+TGG | 0.293992 | 2.4:+34715153 | MS.gene83227:CDS |
CAGCGGTTTGGTTCGCGAAA+TGG | 0.374279 | 2.4:+34715146 | MS.gene83227:CDS |
GGCCTTGGTTCTCGTGTAGT+TGG | 0.374500 | 2.4:+34715027 | MS.gene83227:CDS |
GTTATACCAGGGACTGATAA+TGG | 0.382078 | 2.4:+34715366 | MS.gene83227:CDS |
AACCGGTCGAACACGCCTTT+CGG | 0.389841 | 2.4:+34715006 | MS.gene83227:CDS |
TGTTGCAAGCTCAATCAAAA+AGG | 0.391243 | 2.4:-34715118 | None:intergenic |
TCAGGAACACCATTGCTATC+AGG | 0.394368 | 2.4:-34715486 | None:intergenic |
GCAAAGTTTGAGAGAATTGT+TGG | 0.396020 | 2.4:+34715429 | MS.gene83227:CDS |
CGTGTAGTTGGAACACTCTT+CGG | 0.401610 | 2.4:+34715039 | MS.gene83227:CDS |
CGCTCAGCTCTCACCGTGTT+CGG | 0.408847 | 2.4:+34714979 | MS.gene83227:CDS |
TGAGAGCAGTGGCGATTTCA+AGG | 0.411124 | 2.4:+34714953 | MS.gene83227:CDS |
TCTCCTTGTTGCATGTGCAT+TGG | 0.421741 | 2.4:-34714926 | None:intergenic |
GGCCGAAAGGCGTGTTCGAC+CGG | 0.429701 | 2.4:-34715008 | None:intergenic |
TGCAACACCGATCAGCGGTT+TGG | 0.451076 | 2.4:+34715134 | MS.gene83227:CDS |
CCGAAGAGAATGCGGGCAAA+AGG | 0.452366 | 2.4:+34715296 | MS.gene83227:CDS |
ACACCAGCACCCATTGAAAT+CGG | 0.454573 | 2.4:-34715345 | None:intergenic |
TGGGTCAGTAAGAATTGCTC+TGG | 0.468506 | 2.4:+34715173 | MS.gene83227:CDS |
TCACCGTGTTCGGCAAGAAC+CGG | 0.473449 | 2.4:+34714989 | MS.gene83227:CDS |
AGCAAATAAATACTAAGCTC+AGG | 0.482261 | 2.4:-34715504 | None:intergenic |
AGCTGTGGAGCCGATTTCAA+TGG | 0.488272 | 2.4:+34715335 | MS.gene83227:CDS |
CAAAGTTTGAGAGAATTGTT+GGG | 0.491568 | 2.4:+34715430 | MS.gene83227:CDS |
AACAAGGTTGGAACTGAAGA+TGG | 0.498226 | 2.4:+34714802 | MS.gene83227:CDS |
ATGGGTGCTGGTGTTATACC+AGG | 0.505030 | 2.4:+34715354 | MS.gene83227:CDS |
GAGAATGCGGGCAAAAGGAG+TGG | 0.513741 | 2.4:+34715301 | MS.gene83227:CDS |
TTTCATTGGACAAACAAGGT+TGG | 0.516802 | 2.4:+34714790 | MS.gene83227:CDS |
TCTGCTCCATTATCAGTCCC+TGG | 0.519108 | 2.4:-34715372 | None:intergenic |
AAGCAGAGAAGAAAAGCTTA+AGG | 0.521495 | 2.4:+34715214 | MS.gene83227:CDS |
ACTGATAATGGAGCAGAAGC+AGG | 0.532733 | 2.4:+34715378 | MS.gene83227:CDS |
GCTGTGGAGCCGATTTCAAT+GGG | 0.538795 | 2.4:+34715336 | MS.gene83227:CDS |
TGGTTCGCGAAATGGCATCT+GGG | 0.541090 | 2.4:+34715154 | MS.gene83227:CDS |
CGACCGGTTCTTGCCGAACA+CGG | 0.544927 | 2.4:-34714992 | None:intergenic |
TGGAGCAGAAGCAGGACAAG+AGG | 0.545912 | 2.4:+34715386 | MS.gene83227:CDS |
GAGCCGATTTCAATGGGTGC+TGG | 0.554131 | 2.4:+34715342 | MS.gene83227:CDS |
TTCGACTCTCATTCAGAAGG+AGG | 0.560890 | 2.4:+34714849 | MS.gene83227:CDS |
GGATAAGAAAGAGGCTGACA+AGG | 0.563529 | 2.4:+34714870 | MS.gene83227:CDS |
TGACAAGGTTGTTGATCCTG+AGG | 0.564550 | 2.4:+34714885 | MS.gene83227:CDS |
TATTGCAATGGCAAGAAATG+TGG | 0.567073 | 2.4:+34715264 | MS.gene83227:CDS |
TCAGAAGGAGGATAAGAAAG+AGG | 0.581589 | 2.4:+34714861 | MS.gene83227:CDS |
GGAGCAGAAGCAGGACAAGA+GGG | 0.589548 | 2.4:+34715387 | MS.gene83227:CDS |
TTGCTAACCGAAGAGAATGC+GGG | 0.590108 | 2.4:+34715289 | MS.gene83227:CDS |
GTAGCAACTGATGAAACCTC+AGG | 0.592839 | 2.4:-34714901 | None:intergenic |
TCGCGAACCAAACCGCTGAT+CGG | 0.596673 | 2.4:-34715141 | None:intergenic |
AAGGAGAAAGCTGAGAGCAG+TGG | 0.611507 | 2.4:+34714942 | MS.gene83227:CDS |
ACACTCTTCGGATACAGACG+TGG | 0.614842 | 2.4:+34715051 | MS.gene83227:CDS |
AGGGTGAACTTATGTACATG+AGG | 0.615478 | 2.4:+34715406 | MS.gene83227:CDS |
CAGCCAATGCACATGCAACA+AGG | 0.617013 | 2.4:+34714923 | MS.gene83227:CDS |
AGAATGCGGGCAAAAGGAGT+GGG | 0.620572 | 2.4:+34715302 | MS.gene83227:CDS |
GTGGGATATTCTCAAAGCTG+TGG | 0.621077 | 2.4:+34715320 | MS.gene83227:CDS |
ACACGAGAACCAAGGCCGAA+AGG | 0.624612 | 2.4:-34715021 | None:intergenic |
TTTGCTAACCGAAGAGAATG+CGG | 0.625223 | 2.4:+34715288 | MS.gene83227:CDS |
GGTTGCTTGAAGAGCCTCAG+TGG | 0.639061 | 2.4:+34715235 | MS.gene83227:CDS |
GAGCTTGCAACACCGATCAG+CGG | 0.646768 | 2.4:+34715129 | MS.gene83227:CDS |
TGCTTGAAGAGCCTCAGTGG+AGG | 0.649149 | 2.4:+34715238 | MS.gene83227:CDS |
CAGTGGAGGACATATTGCAA+TGG | 0.652311 | 2.4:+34715252 | MS.gene83227:CDS |
AATTGCTCTGGAATGTGACA+AGG | 0.655325 | 2.4:+34715185 | MS.gene83227:CDS |
CACTCTTCGGATACAGACGT+GGG | 0.655753 | 2.4:+34715052 | MS.gene83227:CDS |
GGGTGAACTTATGTACATGA+GGG | 0.663670 | 2.4:+34715407 | MS.gene83227:CDS |
TGGGTGCTGGTGTTATACCA+GGG | 0.691210 | 2.4:+34715355 | MS.gene83227:CDS |
TTCCAACTACACGAGAACCA+AGG | 0.713314 | 2.4:-34715029 | None:intergenic |
TTGCAATATGTCCTCCACTG+AGG | 0.726059 | 2.4:-34715249 | None:intergenic |
ATGATGAATCCTGATAGCAA+TGG | 0.740095 | 2.4:+34715477 | MS.gene83227:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGTACATTTTGCATTTCAAA+AGG | + | chr2.4:34715077-34715096 | MS.gene83227:CDS | 25.0% |
AGCAAATAAATACTAAGCTC+AGG | - | chr2.4:34715507-34715526 | None:intergenic | 30.0% | |
CAAAGTTTGAGAGAATTGTT+GGG | + | chr2.4:34715430-34715449 | MS.gene83227:CDS | 30.0% | |
! | ACATTTTCATTGGACAAACA+AGG | + | chr2.4:34714786-34714805 | MS.gene83227:CDS | 30.0% |
!! | CTTCTAAGAGACATTTTCAT+TGG | + | chr2.4:34714776-34714795 | MS.gene83227:CDS | 30.0% |
AAGCAGAGAAGAAAAGCTTA+AGG | + | chr2.4:34715214-34715233 | MS.gene83227:CDS | 35.0% | |
ATGATGAATCCTGATAGCAA+TGG | + | chr2.4:34715477-34715496 | MS.gene83227:CDS | 35.0% | |
CTCAATCAAAAAGGCTTCTT+GGG | - | chr2.4:34715112-34715131 | None:intergenic | 35.0% | |
GCAAAGTTTGAGAGAATTGT+TGG | + | chr2.4:34715429-34715448 | MS.gene83227:CDS | 35.0% | |
TATTGCAATGGCAAGAAATG+TGG | + | chr2.4:34715264-34715283 | MS.gene83227:CDS | 35.0% | |
TGTTGCAAGCTCAATCAAAA+AGG | - | chr2.4:34715121-34715140 | None:intergenic | 35.0% | |
TTTCATTGGACAAACAAGGT+TGG | + | chr2.4:34714790-34714809 | MS.gene83227:CDS | 35.0% | |
AAAAAGGCTTCTTGGGAAGT+TGG | - | chr2.4:34715105-34715124 | None:intergenic | 40.0% | |
AACAAGGTTGGAACTGAAGA+TGG | + | chr2.4:34714802-34714821 | MS.gene83227:CDS | 40.0% | |
AGGGTGAACTTATGTACATG+AGG | + | chr2.4:34715406-34715425 | MS.gene83227:CDS | 40.0% | |
GCTCAATCAAAAAGGCTTCT+TGG | - | chr2.4:34715113-34715132 | None:intergenic | 40.0% | |
GGGTGAACTTATGTACATGA+GGG | + | chr2.4:34715407-34715426 | MS.gene83227:CDS | 40.0% | |
GTTATACCAGGGACTGATAA+TGG | + | chr2.4:34715366-34715385 | MS.gene83227:CDS | 40.0% | |
TCAGAAGGAGGATAAGAAAG+AGG | + | chr2.4:34714861-34714880 | MS.gene83227:CDS | 40.0% | |
TTTGCTAACCGAAGAGAATG+CGG | + | chr2.4:34715288-34715307 | MS.gene83227:CDS | 40.0% | |
! | GTTTTCGACTCTCATTCAGA+AGG | + | chr2.4:34714846-34714865 | MS.gene83227:CDS | 40.0% |
!! | AATTGCTCTGGAATGTGACA+AGG | + | chr2.4:34715185-34715204 | MS.gene83227:CDS | 40.0% |
ACACCAGCACCCATTGAAAT+CGG | - | chr2.4:34715348-34715367 | None:intergenic | 45.0% | |
CAGTGGAGGACATATTGCAA+TGG | + | chr2.4:34715252-34715271 | MS.gene83227:CDS | 45.0% | |
CGTGTAGTTGGAACACTCTT+CGG | + | chr2.4:34715039-34715058 | MS.gene83227:CDS | 45.0% | |
GGATAAGAAAGAGGCTGACA+AGG | + | chr2.4:34714870-34714889 | MS.gene83227:CDS | 45.0% | |
GTAGCAACTGATGAAACCTC+AGG | - | chr2.4:34714904-34714923 | None:intergenic | 45.0% | |
GTGGGATATTCTCAAAGCTG+TGG | + | chr2.4:34715320-34715339 | MS.gene83227:CDS | 45.0% | |
TCAGGAACACCATTGCTATC+AGG | - | chr2.4:34715489-34715508 | None:intergenic | 45.0% | |
TCTCCTTGTTGCATGTGCAT+TGG | - | chr2.4:34714929-34714948 | None:intergenic | 45.0% | |
TGACAAGGTTGTTGATCCTG+AGG | + | chr2.4:34714885-34714904 | MS.gene83227:CDS | 45.0% | |
TGGGTCAGTAAGAATTGCTC+TGG | + | chr2.4:34715173-34715192 | MS.gene83227:CDS | 45.0% | |
TTCCAACTACACGAGAACCA+AGG | - | chr2.4:34715032-34715051 | None:intergenic | 45.0% | |
TTCGACTCTCATTCAGAAGG+AGG | + | chr2.4:34714849-34714868 | MS.gene83227:CDS | 45.0% | |
TTGCAATATGTCCTCCACTG+AGG | - | chr2.4:34715252-34715271 | None:intergenic | 45.0% | |
TTGCTAACCGAAGAGAATGC+GGG | + | chr2.4:34715289-34715308 | MS.gene83227:CDS | 45.0% | |
!! | ACTGATAATGGAGCAGAAGC+AGG | + | chr2.4:34715378-34715397 | MS.gene83227:CDS | 45.0% |
AAGGAGAAAGCTGAGAGCAG+TGG | + | chr2.4:34714942-34714961 | MS.gene83227:CDS | 50.0% | |
ACACTCTTCGGATACAGACG+TGG | + | chr2.4:34715051-34715070 | MS.gene83227:CDS | 50.0% | |
AGAATGCGGGCAAAAGGAGT+GGG | + | chr2.4:34715302-34715321 | MS.gene83227:CDS | 50.0% | |
CACTCTTCGGATACAGACGT+GGG | + | chr2.4:34715052-34715071 | MS.gene83227:CDS | 50.0% | |
CAGCCAATGCACATGCAACA+AGG | + | chr2.4:34714923-34714942 | MS.gene83227:CDS | 50.0% | |
TCTGCTCCATTATCAGTCCC+TGG | - | chr2.4:34715375-34715394 | None:intergenic | 50.0% | |
TGAGAGCAGTGGCGATTTCA+AGG | + | chr2.4:34714953-34714972 | MS.gene83227:CDS | 50.0% | |
TGGTTCGCGAAATGGCATCT+GGG | + | chr2.4:34715154-34715173 | MS.gene83227:CDS | 50.0% | |
! | AGCTGTGGAGCCGATTTCAA+TGG | + | chr2.4:34715335-34715354 | MS.gene83227:CDS | 50.0% |
! | CCTTTTGCCCGCATTCTCTT+CGG | - | chr2.4:34715299-34715318 | None:intergenic | 50.0% |
! | GCTGTGGAGCCGATTTCAAT+GGG | + | chr2.4:34715336-34715355 | MS.gene83227:CDS | 50.0% |
! | TTGGTTCGCGAAATGGCATC+TGG | + | chr2.4:34715153-34715172 | MS.gene83227:CDS | 50.0% |
!! | ATGGGTGCTGGTGTTATACC+AGG | + | chr2.4:34715354-34715373 | MS.gene83227:CDS | 50.0% |
!! | TGGGTGCTGGTGTTATACCA+GGG | + | chr2.4:34715355-34715374 | MS.gene83227:CDS | 50.0% |
AACCGGTCGAACACGCCTTT+CGG | + | chr2.4:34715006-34715025 | MS.gene83227:CDS | 55.0% | |
ACACGAGAACCAAGGCCGAA+AGG | - | chr2.4:34715024-34715043 | None:intergenic | 55.0% | |
CCGAAGAGAATGCGGGCAAA+AGG | + | chr2.4:34715296-34715315 | MS.gene83227:CDS | 55.0% | |
GAGAATGCGGGCAAAAGGAG+TGG | + | chr2.4:34715301-34715320 | MS.gene83227:CDS | 55.0% | |
GAGCTTGCAACACCGATCAG+CGG | + | chr2.4:34715129-34715148 | MS.gene83227:CDS | 55.0% | |
GGAGCAGAAGCAGGACAAGA+GGG | + | chr2.4:34715387-34715406 | MS.gene83227:CDS | 55.0% | |
GGTTGCTTGAAGAGCCTCAG+TGG | + | chr2.4:34715235-34715254 | MS.gene83227:CDS | 55.0% | |
TCACCGTGTTCGGCAAGAAC+CGG | + | chr2.4:34714989-34715008 | MS.gene83227:CDS | 55.0% | |
TCGCGAACCAAACCGCTGAT+CGG | - | chr2.4:34715144-34715163 | None:intergenic | 55.0% | |
TGCAACACCGATCAGCGGTT+TGG | + | chr2.4:34715134-34715153 | MS.gene83227:CDS | 55.0% | |
TGCTTGAAGAGCCTCAGTGG+AGG | + | chr2.4:34715238-34715257 | MS.gene83227:CDS | 55.0% | |
TGGAGCAGAAGCAGGACAAG+AGG | + | chr2.4:34715386-34715405 | MS.gene83227:CDS | 55.0% | |
! | GAGCCGATTTCAATGGGTGC+TGG | + | chr2.4:34715342-34715361 | MS.gene83227:CDS | 55.0% |
! | GGCCTTGGTTCTCGTGTAGT+TGG | + | chr2.4:34715027-34715046 | MS.gene83227:CDS | 55.0% |
!! | CAGCGGTTTGGTTCGCGAAA+TGG | + | chr2.4:34715146-34715165 | MS.gene83227:CDS | 55.0% |
CGCTCAGCTCTCACCGTGTT+CGG | + | chr2.4:34714979-34714998 | MS.gene83227:CDS | 60.0% | |
TCGAACACGCCTTTCGGCCT+TGG | + | chr2.4:34715012-34715031 | MS.gene83227:CDS | 60.0% | |
! | CGACCGGTTCTTGCCGAACA+CGG | - | chr2.4:34714995-34715014 | None:intergenic | 60.0% |
! | GGCCGAAAGGCGTGTTCGAC+CGG | - | chr2.4:34715011-34715030 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 34714754 | 34715536 | 34714754 | ID=MS.gene83227 |
chr2.4 | mRNA | 34714754 | 34715536 | 34714754 | ID=MS.gene83227.t1;Parent=MS.gene83227 |
chr2.4 | exon | 34714754 | 34715536 | 34714754 | ID=MS.gene83227.t1.exon1;Parent=MS.gene83227.t1 |
chr2.4 | CDS | 34714754 | 34715536 | 34714754 | ID=cds.MS.gene83227.t1;Parent=MS.gene83227.t1 |
Gene Sequence |
Protein sequence |