Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83279.t1 | XP_024641995.1 | 91.4 | 733 | 57 | 4 | 20 | 750 | 75 | 803 | 0.00E+00 | 1110.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83279.t1 | Q8IWB9 | 22.5 | 316 | 212 | 5 | 299 | 595 | 825 | 1126 | 9.2e-19 | 97.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83279.t1 | A0A396HHW7 | 91.4 | 733 | 57 | 4 | 20 | 750 | 75 | 803 | 0.0e+00 | 1110.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene83279 | 0.835443 | 1.67E-56 | -1.69E-46 |
| MS.gene049369 | MS.gene83279 | 0.812725 | 3.67E-51 | -1.69E-46 |
| MS.gene049396 | MS.gene83279 | 0.843942 | 1.03E-58 | -1.69E-46 |
| MS.gene050670 | MS.gene83279 | 0.800632 | 1.32E-48 | -1.69E-46 |
| MS.gene051360 | MS.gene83279 | 0.816746 | 4.72E-52 | -1.69E-46 |
| MS.gene051734 | MS.gene83279 | 0.801474 | 8.85E-49 | -1.69E-46 |
| MS.gene051838 | MS.gene83279 | 0.810905 | 9.13E-51 | -1.69E-46 |
| MS.gene052414 | MS.gene83279 | 0.834493 | 2.90E-56 | -1.69E-46 |
| MS.gene053449 | MS.gene83279 | 0.839402 | 1.62E-57 | -1.69E-46 |
| MS.gene053758 | MS.gene83279 | 0.808013 | 3.81E-50 | -1.69E-46 |
| MS.gene053912 | MS.gene83279 | 0.835114 | 2.03E-56 | -1.69E-46 |
| MS.gene054003 | MS.gene83279 | 0.811484 | 6.84E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene83279 | 0.805779 | 1.13E-49 | -1.69E-46 |
| MS.gene055486 | MS.gene83279 | 0.803028 | 4.24E-49 | -1.69E-46 |
| MS.gene055909 | MS.gene83279 | 0.823472 | 1.36E-53 | -1.69E-46 |
| MS.gene055911 | MS.gene83279 | 0.817434 | 3.30E-52 | -1.69E-46 |
| MS.gene056166 | MS.gene83279 | 0.826393 | 2.78E-54 | -1.69E-46 |
| MS.gene056422 | MS.gene83279 | 0.823476 | 1.36E-53 | -1.69E-46 |
| MS.gene056448 | MS.gene83279 | 0.820905 | 5.36E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene83279 | 0.875861 | 2.21E-68 | -1.69E-46 |
| MS.gene057076 | MS.gene83279 | 0.802332 | 5.90E-49 | -1.69E-46 |
| MS.gene057668 | MS.gene83279 | 0.841427 | 4.78E-58 | -1.69E-46 |
| MS.gene057734 | MS.gene83279 | 0.855434 | 6.33E-62 | -1.69E-46 |
| MS.gene057856 | MS.gene83279 | 0.820794 | 5.68E-53 | -1.69E-46 |
| MS.gene058007 | MS.gene83279 | 0.823573 | 1.29E-53 | -1.69E-46 |
| MS.gene058120 | MS.gene83279 | 0.800748 | 1.25E-48 | -1.69E-46 |
| MS.gene058376 | MS.gene83279 | 0.834247 | 3.35E-56 | -1.69E-46 |
| MS.gene059455 | MS.gene83279 | 0.822534 | 2.25E-53 | -1.69E-46 |
| MS.gene059674 | MS.gene83279 | 0.819879 | 9.21E-53 | -1.69E-46 |
| MS.gene059711 | MS.gene83279 | 0.814626 | 1.40E-51 | -1.69E-46 |
| MS.gene059807 | MS.gene83279 | 0.852193 | 5.42E-61 | -1.69E-46 |
| MS.gene060804 | MS.gene83279 | 0.803143 | 4.01E-49 | -1.69E-46 |
| MS.gene060818 | MS.gene83279 | 0.803404 | 3.54E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene83279 | 0.863246 | 2.86E-64 | -1.69E-46 |
| MS.gene06097 | MS.gene83279 | 0.81583 | 7.56E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83279.t1 | MTR_6g066300 | 93.151 | 730 | 44 | 4 | 23 | 750 | 23 | 748 | 0.0 | 1339 |
| MS.gene83279.t1 | MTR_1g077470 | 59.249 | 746 | 250 | 13 | 20 | 745 | 69 | 780 | 0.0 | 800 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83279.t1 | AT1G17820 | 44.156 | 770 | 332 | 19 | 20 | 745 | 69 | 784 | 0.0 | 579 |
| MS.gene83279.t1 | AT1G73200 | 45.101 | 745 | 339 | 21 | 20 | 745 | 68 | 761 | 0.0 | 576 |
Find 166 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATATTGGGTTTGGGTTT+GGG | 0.118851 | 6.1:-62340199 | MS.gene83279:CDS |
| ATGCCTACGCTTTCACTATT+TGG | 0.123258 | 6.1:+62335805 | None:intergenic |
| GTTTGGGGTTGGGTTTCTTC+AGG | 0.215943 | 6.1:-62340183 | MS.gene83279:CDS |
| TTGGGTTTGGGTTTGGGGTT+GGG | 0.230499 | 6.1:-62340193 | MS.gene83279:CDS |
| TTCCTATCACTTTGGCAATA+AGG | 0.235656 | 6.1:-62336526 | MS.gene83279:CDS |
| ATTGATATTGGGTTTGGGTT+TGG | 0.256846 | 6.1:-62340200 | MS.gene83279:CDS |
| ATTGTTCATGTCATTGATAT+TGG | 0.268667 | 6.1:-62340212 | MS.gene83279:CDS |
| ATTGGGTTTGGGTTTGGGGT+TGG | 0.281811 | 6.1:-62340194 | MS.gene83279:CDS |
| GTTTCTCCTGTTAGGAAGTA+TGG | 0.286219 | 6.1:-62340068 | MS.gene83279:CDS |
| GAGGTTGACATCGAATATTC+TGG | 0.288180 | 6.1:-62337814 | MS.gene83279:CDS |
| TGTTGGCCACTTTCTAATAA+AGG | 0.289373 | 6.1:+62335478 | None:intergenic |
| TGCCTACGCTTTCACTATTT+GGG | 0.314845 | 6.1:+62335806 | None:intergenic |
| TCTTCTGCAGGCAGCAATTC+GGG | 0.315263 | 6.1:-62335842 | MS.gene83279:intron |
| GGTTTCTTCAGGGTGTAGTT+TGG | 0.316306 | 6.1:-62340172 | MS.gene83279:CDS |
| TTGTTCATGTCATTGATATT+GGG | 0.325202 | 6.1:-62340211 | MS.gene83279:CDS |
| TCCTATCACTTTGGCAATAA+GGG | 0.326907 | 6.1:-62336525 | MS.gene83279:CDS |
| CTCTTCTGCAGGCAGCAATT+CGG | 0.329201 | 6.1:-62335843 | MS.gene83279:intron |
| CTTTCACTCCACCAGAAGTT+TGG | 0.329291 | 6.1:+62335668 | None:intergenic |
| AATCACTAGTTTCTTGTTGT+TGG | 0.332638 | 6.1:+62335461 | None:intergenic |
| GTTTCTTCAGGGTGTAGTTT+GGG | 0.335417 | 6.1:-62340171 | MS.gene83279:CDS |
| CATGTCATTGATATTGGGTT+TGG | 0.341049 | 6.1:-62340206 | MS.gene83279:CDS |
| TTCGACCAGTTCGGCTCAAC+AGG | 0.344859 | 6.1:-62335320 | MS.gene83279:CDS |
| TGATATTGGGTTTGGGTTTG+GGG | 0.347995 | 6.1:-62340198 | MS.gene83279:CDS |
| ATATGGATCAACCAAGAATC+TGG | 0.349308 | 6.1:-62335727 | MS.gene83279:CDS |
| ATATTACCATACTTCCTAAC+AGG | 0.354920 | 6.1:+62340062 | None:intergenic |
| ATGTCATTGATATTGGGTTT+GGG | 0.355443 | 6.1:-62340205 | MS.gene83279:CDS |
| AAGTTTCATTCCCAGATTCT+TGG | 0.360415 | 6.1:+62335716 | None:intergenic |
| GATAGCAATAACCAAACTTC+TGG | 0.364101 | 6.1:-62335679 | MS.gene83279:CDS |
| TGCTTGAGAATCTGATTTCC+TGG | 0.365550 | 6.1:+62335567 | None:intergenic |
| ATATTCTGGAAGTGCAATAT+TGG | 0.369791 | 6.1:-62337800 | MS.gene83279:CDS |
| TGATGGAGCATCGTCTGATA+TGG | 0.377589 | 6.1:+62338851 | None:intergenic |
| GAGTATTTAGATAAGCAATT+AGG | 0.382026 | 6.1:-62337676 | MS.gene83279:CDS |
| GTTTGGTTATTGCTATCAAT+TGG | 0.383830 | 6.1:+62335685 | None:intergenic |
| TTTGGGGTTGGGTTTCTTCA+GGG | 0.386518 | 6.1:-62340182 | MS.gene83279:CDS |
| TCCAAGTTGAAGTCTATATC+AGG | 0.387688 | 6.1:+62336422 | None:intergenic |
| TTGCTTTGTTCCTGATCAAC+CGG | 0.388432 | 6.1:-62336361 | MS.gene83279:CDS |
| GGAATGTTGCACCTTTCATA+TGG | 0.397009 | 6.1:-62335744 | MS.gene83279:CDS |
| TCTGACACCGATGAAAAGTT+TGG | 0.400358 | 6.1:-62338774 | MS.gene83279:CDS |
| TCATCATCCCTGTCTCGTTC+AGG | 0.402009 | 6.1:-62338822 | MS.gene83279:CDS |
| GTACCTTGAGCCGGTTGATC+AGG | 0.405477 | 6.1:+62336351 | None:intergenic |
| AACCCTCATCCCAATGATAC+AGG | 0.410476 | 6.1:+62337870 | None:intergenic |
| TTCCAATCACCATCTTCTTT+AGG | 0.414265 | 6.1:+62337622 | None:intergenic |
| GAAGGTTTCAAAGTACTTTG+TGG | 0.414855 | 6.1:-62340135 | MS.gene83279:CDS |
| AATGTTCCACCCTGTATCAT+TGG | 0.416971 | 6.1:-62337880 | MS.gene83279:CDS |
| AAGTACTTTGAAACCTTCTC+TGG | 0.419257 | 6.1:+62340140 | None:intergenic |
| ATCCGTGCAAGAGAGAATTC+AGG | 0.424667 | 6.1:-62338670 | MS.gene83279:intron |
| TCAAAAGGTTCCTATCACTT+TGG | 0.424731 | 6.1:-62336534 | MS.gene83279:intron |
| ACCCGATCAAAGTGGAAAAC+AGG | 0.425455 | 6.1:-62339316 | MS.gene83279:CDS |
| AAAGAAAACTGAGAAACTTC+GGG | 0.426927 | 6.1:-62338943 | MS.gene83279:CDS |
| TCTTCTCTTCGCTAGCTTCG+TGG | 0.432629 | 6.1:+62335404 | None:intergenic |
| TGAGAATCTGATTTCCTGGC+TGG | 0.433212 | 6.1:+62335571 | None:intergenic |
| ATCATCCTGTTGAGCCGAAC+TGG | 0.437373 | 6.1:+62335315 | None:intergenic |
| GATCATCAAAAGAGGTGAAA+AGG | 0.439984 | 6.1:-62340109 | MS.gene83279:CDS |
| CACCCTGTATCATTGGGATG+AGG | 0.441486 | 6.1:-62337873 | MS.gene83279:CDS |
| ACAAGAAACTAGTGATTTGA+AGG | 0.442278 | 6.1:-62335455 | MS.gene83279:CDS |
| TTTGGCTTCCTGAACGAGAC+AGG | 0.442494 | 6.1:+62338814 | None:intergenic |
| ACCCTTATTGCCAAAGTGAT+AGG | 0.448457 | 6.1:+62336524 | None:intergenic |
| AGCCTAAAGAAGATGGTGAT+TGG | 0.450084 | 6.1:-62337624 | MS.gene83279:CDS |
| AAGATCTTCCCGAGTTGGCT+TGG | 0.457101 | 6.1:-62339003 | MS.gene83279:CDS |
| AAAACGCAGTGTCCCTCTTA+GGG | 0.459266 | 6.1:+62336496 | None:intergenic |
| ATGGTGTAAGGCCCTCCGTT+TGG | 0.460478 | 6.1:-62339225 | MS.gene83279:CDS |
| ATCCCGTGTCGAACAATGTT+GGG | 0.460921 | 6.1:-62337729 | MS.gene83279:CDS |
| TTCAACTTGGAATCATCTGT+TGG | 0.464203 | 6.1:-62336410 | MS.gene83279:CDS |
| TCAAAACCTTTATTAGAAAG+TGG | 0.472444 | 6.1:-62335484 | MS.gene83279:CDS |
| TCGTGGTCACTTTCTAATGA+AGG | 0.474003 | 6.1:+62335421 | None:intergenic |
| CACAGTTGATCGGCGGGTGG+CGG | 0.475158 | 6.1:+62336464 | None:intergenic |
| AAAAGAAAACTGAGAAACTT+CGG | 0.476046 | 6.1:-62338944 | MS.gene83279:CDS |
| GAACAAAGCAATGCGCGTAT+TGG | 0.482320 | 6.1:+62336373 | None:intergenic |
| ATGTTCCACCCTGTATCATT+GGG | 0.484097 | 6.1:-62337879 | MS.gene83279:CDS |
| AATGCACCTTCCTCGACTCC+TGG | 0.486513 | 6.1:-62337000 | MS.gene83279:CDS |
| TTGATGAGGGAACATTATGT+TGG | 0.486865 | 6.1:-62338749 | MS.gene83279:CDS |
| TGAGAAAGAGGCATGGTGTA+AGG | 0.488123 | 6.1:-62339237 | MS.gene83279:CDS |
| GTCAATCAGTTCGACCAGTT+CGG | 0.488922 | 6.1:-62335329 | MS.gene83279:CDS |
| CTTGTTCTCACTGAGCCTGA+TGG | 0.489817 | 6.1:-62340026 | MS.gene83279:CDS |
| CTTGCAACTGCGAATACCAT+TGG | 0.496512 | 6.1:+62339177 | None:intergenic |
| ATAGATTTCCATCTTGATCC+AGG | 0.497314 | 6.1:+62336982 | None:intergenic |
| ACCCTGTATCATTGGGATGA+GGG | 0.499379 | 6.1:-62337872 | MS.gene83279:CDS |
| AAATCTTGAATAATATCTGA+TGG | 0.502351 | 6.1:+62337700 | None:intergenic |
| GAGTTGGCTTGGATAACAAA+TGG | 0.506671 | 6.1:-62338992 | MS.gene83279:CDS |
| AGTTGGTGAGCTAGAGAAAG+AGG | 0.506751 | 6.1:-62337758 | MS.gene83279:CDS |
| TGAGACTTCGTCTGAGAAAG+AGG | 0.510698 | 6.1:-62339249 | MS.gene83279:CDS |
| ATGGTTGTATGCGATCCATC+AGG | 0.512009 | 6.1:+62340011 | None:intergenic |
| CGAATAGTGCAGTGATGGAT+AGG | 0.514333 | 6.1:-62335351 | MS.gene83279:CDS |
| TGTTGCCAAGCATGTTTCAC+AGG | 0.516906 | 6.1:-62336950 | MS.gene83279:intron |
| ACGAGAAGATCTTCCCGAGT+TGG | 0.518906 | 6.1:-62339008 | MS.gene83279:CDS |
| TCGTCTGATATGGAACTTCT+CGG | 0.519274 | 6.1:+62338861 | None:intergenic |
| TGGGATGAGGGTTCTTCCGA+TGG | 0.522231 | 6.1:-62337860 | MS.gene83279:CDS |
| GAAGATGGTGATTGGAACAA+TGG | 0.523042 | 6.1:-62337616 | MS.gene83279:intron |
| GAAAAGTTTGGTATTGATGA+GGG | 0.526720 | 6.1:-62338762 | MS.gene83279:CDS |
| TGGTTATTGCTATCAATTGG+AGG | 0.536308 | 6.1:+62335688 | None:intergenic |
| AACAAATGGACTTCACTCTC+AGG | 0.538781 | 6.1:-62338978 | MS.gene83279:CDS |
| GTTCCTGATCAACCGGCTCA+AGG | 0.539141 | 6.1:-62336354 | MS.gene83279:intron |
| CGAAGCTAGCGAAGAGAAGA+CGG | 0.539187 | 6.1:-62335401 | MS.gene83279:CDS |
| AACCTGAATTCTCTCTTGCA+CGG | 0.542748 | 6.1:+62338668 | None:intergenic |
| AAGTGTTGAGGCAATAGAAA+GGG | 0.545264 | 6.1:-62339084 | MS.gene83279:CDS |
| GAACTATTTGTACCTTGAGC+CGG | 0.545514 | 6.1:+62336342 | None:intergenic |
| AGCAATAACCAAACTTCTGG+TGG | 0.546655 | 6.1:-62335676 | MS.gene83279:CDS |
| AATCCCGTGTCGAACAATGT+TGG | 0.546792 | 6.1:-62337730 | MS.gene83279:CDS |
| CCATACCACAGTTGATCGGC+GGG | 0.547019 | 6.1:+62336458 | None:intergenic |
| ATAAGGGTAGCATCCCTAAG+AGG | 0.547041 | 6.1:-62336509 | MS.gene83279:CDS |
| TATGGATCAACCAAGAATCT+GGG | 0.548472 | 6.1:-62335726 | MS.gene83279:CDS |
| TGAAAAGTTTGGTATTGATG+AGG | 0.549156 | 6.1:-62338763 | MS.gene83279:CDS |
| AGGAAGTATGGTAATATCAA+AGG | 0.551644 | 6.1:-62340056 | MS.gene83279:CDS |
| TTTCATCACATGAGGCCAAA+CGG | 0.552918 | 6.1:+62339210 | None:intergenic |
| TCAACACTTAATCCTACTGT+TGG | 0.555166 | 6.1:+62339098 | None:intergenic |
| CCCGCCGATCAACTGTGGTA+TGG | 0.556456 | 6.1:-62336458 | MS.gene83279:CDS |
| TAAGTGTTGAGGCAATAGAA+AGG | 0.556870 | 6.1:-62339085 | MS.gene83279:CDS |
| CCTCGACTCCTGGATCAAGA+TGG | 0.559242 | 6.1:-62336990 | MS.gene83279:CDS |
| GCCTGATATAGACTTCAACT+TGG | 0.559696 | 6.1:-62336423 | MS.gene83279:CDS |
| GATGCATCCTTTGAGCTGAA+TGG | 0.566318 | 6.1:+62339992 | None:intergenic |
| TTTGTTATCCAAGCCAACTC+GGG | 0.567675 | 6.1:+62338995 | None:intergenic |
| AAAGCTAGTGCAAAGACCTC+AGG | 0.569315 | 6.1:-62335649 | MS.gene83279:CDS |
| ACGACATCACCGACATATGC+GGG | 0.570605 | 6.1:+62337925 | None:intergenic |
| TCGCAAGAGCCTAAAGAAGA+TGG | 0.571853 | 6.1:-62337631 | MS.gene83279:CDS |
| GCCTTCGAATAGTGCAGTGA+TGG | 0.573192 | 6.1:-62335356 | MS.gene83279:CDS |
| ATTGAAACAAGGCTAGAAGT+TGG | 0.573990 | 6.1:-62337775 | MS.gene83279:CDS |
| AATGAGCGAGGTATGTGCCT+TGG | 0.574392 | 6.1:-62337836 | MS.gene83279:CDS |
| AATCGAGACAAGATCCAGCC+AGG | 0.576251 | 6.1:-62335585 | MS.gene83279:CDS |
| TAGTGGCTAAAACTGCATCT+TGG | 0.576575 | 6.1:+62338916 | None:intergenic |
| TGTGGAAAGATCATCAAAAG+AGG | 0.580766 | 6.1:-62340117 | MS.gene83279:CDS |
| GAGCGAGGTATGTGCCTTGG+AGG | 0.581153 | 6.1:-62337833 | MS.gene83279:CDS |
| AATAGAAAGGGCTACTAAGA+CGG | 0.581906 | 6.1:-62339072 | MS.gene83279:CDS |
| GAAAGGGCTACTAAGACGGA+TGG | 0.583377 | 6.1:-62339068 | MS.gene83279:CDS |
| GACGACATCACCGACATATG+CGG | 0.584649 | 6.1:+62337924 | None:intergenic |
| ATTTGTTATCCAAGCCAACT+CGG | 0.586001 | 6.1:+62338994 | None:intergenic |
| CATACAACCATTCAGCTCAA+AGG | 0.586848 | 6.1:-62339999 | MS.gene83279:CDS |
| AATCTTGAATAATATCTGAT+GGG | 0.586921 | 6.1:+62337701 | None:intergenic |
| CGTCTGTACAGATATCAACA+TGG | 0.587148 | 6.1:-62337905 | MS.gene83279:CDS |
| GTGAAAGCGTAGGCATTCGA+TGG | 0.590183 | 6.1:-62335798 | MS.gene83279:CDS |
| TCCATCACTGCACTATTCGA+AGG | 0.590384 | 6.1:+62335355 | None:intergenic |
| GACCCAACATTGTTCGACAC+GGG | 0.595452 | 6.1:+62337727 | None:intergenic |
| GTCTGTACAGATATCAACAT+GGG | 0.598911 | 6.1:-62337904 | MS.gene83279:CDS |
| CCATCTTGATCCAGGAGTCG+AGG | 0.603336 | 6.1:+62336990 | None:intergenic |
| CGCCACCCGCCGATCAACTG+TGG | 0.603692 | 6.1:-62336463 | MS.gene83279:CDS |
| TTGGCTTCCTGAACGAGACA+GGG | 0.604129 | 6.1:+62338815 | None:intergenic |
| ATCACATGAGGCCAAACGGA+GGG | 0.605249 | 6.1:+62339214 | None:intergenic |
| ATGAGAACTCCCGCATATGT+CGG | 0.606647 | 6.1:-62337934 | MS.gene83279:CDS |
| TCTTGGTTGATCCATATGAA+AGG | 0.609363 | 6.1:+62335733 | None:intergenic |
| CTTGATCCAGGAGTCGAGGA+AGG | 0.609556 | 6.1:+62336994 | None:intergenic |
| ATGAAAGGTGCAACATTCCG+AGG | 0.610005 | 6.1:+62335748 | None:intergenic |
| TAAGGGTAGCATCCCTAAGA+GGG | 0.611091 | 6.1:-62336508 | MS.gene83279:CDS |
| ATATTCGATGTCAACCTCCA+AGG | 0.613501 | 6.1:+62337819 | None:intergenic |
| GACGGATGGATCTTCCTCAA+AGG | 0.621067 | 6.1:-62339054 | MS.gene83279:CDS |
| AACAGTAGGATTAAGTGTTG+AGG | 0.624183 | 6.1:-62339096 | MS.gene83279:CDS |
| CAATATTGGAGATTGAAACA+AGG | 0.629662 | 6.1:-62337786 | MS.gene83279:CDS |
| CATACCTCGCTCATTTCCAT+CGG | 0.629923 | 6.1:+62337844 | None:intergenic |
| GAAACCATACCACAGTTGAT+CGG | 0.632911 | 6.1:+62336454 | None:intergenic |
| AGGGATGATGATGATAGTGA+TGG | 0.634372 | 6.1:+62338834 | None:intergenic |
| ACCCTCATCCCAATGATACA+GGG | 0.634983 | 6.1:+62337871 | None:intergenic |
| ACCATACCACAGTTGATCGG+CGG | 0.637112 | 6.1:+62336457 | None:intergenic |
| AAGCAATTAGGTCTTGCAGA+AGG | 0.637792 | 6.1:-62337664 | MS.gene83279:CDS |
| GTTGGTGAGCTAGAGAAAGA+GGG | 0.642446 | 6.1:-62337757 | MS.gene83279:CDS |
| AGGACCTCTGTGATATACCA+TGG | 0.648055 | 6.1:-62339296 | MS.gene83279:CDS |
| CGGTTCTGGACTATCACCTG+AGG | 0.654907 | 6.1:+62335633 | None:intergenic |
| AGACCCAACATTGTTCGACA+CGG | 0.659175 | 6.1:+62337726 | None:intergenic |
| TACCACAGTTGATCGGCGGG+TGG | 0.667424 | 6.1:+62336461 | None:intergenic |
| CATCACATGAGGCCAAACGG+AGG | 0.674711 | 6.1:+62339213 | None:intergenic |
| CTTCGTCTGAGAAAGAGGCA+TGG | 0.679779 | 6.1:-62339244 | MS.gene83279:CDS |
| TGGTACCTGTGAAACATGCT+TGG | 0.690113 | 6.1:+62336945 | None:intergenic |
| ATATGCGGGAGTTCTCATGT+TGG | 0.690179 | 6.1:+62337939 | None:intergenic |
| CTCCCAAATAGTGAAAGCGT+AGG | 0.693841 | 6.1:-62335808 | MS.gene83279:CDS |
| CTCATCCCAATGATACAGGG+TGG | 0.698539 | 6.1:+62337874 | None:intergenic |
| GCTTCCATGGTATATCACAG+AGG | 0.709584 | 6.1:+62339292 | None:intergenic |
| TCTTCCGATGGAAATGAGCG+AGG | 0.715274 | 6.1:-62337848 | MS.gene83279:CDS |
| AGGCATTCGATGGATGCTAG+CGG | 0.718095 | 6.1:-62335788 | MS.gene83279:CDS |
| TCTGTACAGATATCAACATG+GGG | 0.718675 | 6.1:-62337903 | MS.gene83279:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACTATTAAGAAATATTTA+GGG | - | chr6.1:62335563-62335582 | MS.gene83279:CDS | 10.0% |
| !! | GATATAATATTCTAAATTTA+GGG | + | chr6.1:62337564-62337583 | None:intergenic | 10.0% |
| !!! | ATATAAGTTATATAATTTTC+AGG | - | chr6.1:62337650-62337669 | MS.gene83279:CDS | 10.0% |
| !!! | GTGTTTATTTATTTATTTTT+TGG | + | chr6.1:62339287-62339306 | None:intergenic | 10.0% |
| !!! | GTTTATTTATTTATTTTTTG+GGG | + | chr6.1:62339285-62339304 | None:intergenic | 10.0% |
| !!! | TTTATTTATTTATTTTTTGG+GGG | + | chr6.1:62339284-62339303 | None:intergenic | 10.0% |
| !!! | TTTTAATTTGTGATATTTTA+AGG | - | chr6.1:62336206-62336225 | MS.gene83279:intron | 10.0% |
| !!! | TTTTGAAATTTATAATCTAT+AGG | + | chr6.1:62338905-62338924 | None:intergenic | 10.0% |
| !! | AAAATATAATATGATGCTAT+AGG | + | chr6.1:62338798-62338817 | None:intergenic | 15.0% |
| !! | ATAGCTTATAAAAAAATAGT+CGG | + | chr6.1:62339896-62339915 | None:intergenic | 15.0% |
| !! | GAAACTATTAAGAAATATTT+AGG | - | chr6.1:62335562-62335581 | MS.gene83279:CDS | 15.0% |
| !! | GGATATAATATTCTAAATTT+AGG | + | chr6.1:62337565-62337584 | None:intergenic | 15.0% |
| !!! | ACTTTAAGAAAAAAATCTTT+GGG | - | chr6.1:62340102-62340121 | MS.gene83279:CDS | 15.0% |
| !!! | GAATATTAGTTTTAGTTATT+TGG | - | chr6.1:62336252-62336271 | MS.gene83279:intron | 15.0% |
| !!! | TAATTTTTTTCAAAAACTGA+CGG | + | chr6.1:62337013-62337032 | None:intergenic | 15.0% |
| !!! | TTATTTATTTATTTTTTGGG+GGG | + | chr6.1:62339283-62339302 | None:intergenic | 15.0% |
| !!! | TTGAAAACTTTATTTTGTTA+TGG | - | chr6.1:62338039-62338058 | MS.gene83279:intron | 15.0% |
| !! | AAATCTTGAATAATATCTGA+TGG | + | chr6.1:62338343-62338362 | None:intergenic | 20.0% |
| !! | AATCTTGAATAATATCTGAT+GGG | + | chr6.1:62338342-62338361 | None:intergenic | 20.0% |
| !! | ATAAAAATTAAGTTTGCAAG+TGG | + | chr6.1:62340175-62340194 | None:intergenic | 20.0% |
| !! | ATATACTTATGTTATCTTAG+TGG | + | chr6.1:62335234-62335253 | None:intergenic | 20.0% |
| !! | ATCTTCTACATTTGAATTAA+TGG | - | chr6.1:62337683-62337702 | MS.gene83279:CDS | 20.0% |
| !! | ATTAGCTATTTATAACTTCA+TGG | + | chr6.1:62339450-62339469 | None:intergenic | 20.0% |
| !! | ATTCTTAATAATGAAAGAAC+GGG | + | chr6.1:62339167-62339186 | None:intergenic | 20.0% |
| !! | GATTCTTAATAATGAAAGAA+CGG | + | chr6.1:62339168-62339187 | None:intergenic | 20.0% |
| !! | GTAGTTTATCTAAATAAACA+AGG | + | chr6.1:62339819-62339838 | None:intergenic | 20.0% |
| !! | TAAAAATTAAGTTTGCAAGT+GGG | + | chr6.1:62340174-62340193 | None:intergenic | 20.0% |
| !! | TATATACTTATGTCATTAAG+TGG | + | chr6.1:62335377-62335396 | None:intergenic | 20.0% |
| !! | TTATAATCTATAGGAAAACA+AGG | + | chr6.1:62338896-62338915 | None:intergenic | 20.0% |
| !! | TTCTATGTATAGTAGAAAAT+AGG | - | chr6.1:62335444-62335463 | MS.gene83279:CDS | 20.0% |
| !! | TTTCATAACTTAACGAAAAA+GGG | + | chr6.1:62339723-62339742 | None:intergenic | 20.0% |
| !!! | AAATAACGATTTGTTCAAAT+TGG | - | chr6.1:62337847-62337866 | MS.gene83279:CDS | 20.0% |
| !!! | ATTATTTAGCTTAACACATT+AGG | - | chr6.1:62337624-62337643 | MS.gene83279:CDS | 20.0% |
| !!! | CTTTAAGAAAAAAATCTTTG+GGG | - | chr6.1:62340103-62340122 | MS.gene83279:CDS | 20.0% |
| !!! | GACTTTAAGAAAAAAATCTT+TGG | - | chr6.1:62340101-62340120 | MS.gene83279:CDS | 20.0% |
| !!! | GATTTGCAATGAATTTTATA+GGG | - | chr6.1:62336692-62336711 | MS.gene83279:intron | 20.0% |
| !!! | TATTTTAAGGTTGATTTCTT+TGG | - | chr6.1:62336219-62336238 | MS.gene83279:intron | 20.0% |
| !!! | TCTTTTTCATAGATTAAACA+AGG | + | chr6.1:62339790-62339809 | None:intergenic | 20.0% |
| !!! | TGATTTGCAATGAATTTTAT+AGG | - | chr6.1:62336691-62336710 | MS.gene83279:intron | 20.0% |
| ! | AAAAAATTGGAAAAAGGGAA+AGG | - | chr6.1:62340758-62340777 | MS.gene83279:intron | 25.0% |
| ! | AAAAGAAAACTGAGAAACTT+CGG | - | chr6.1:62337096-62337115 | MS.gene83279:intron | 25.0% |
| ! | AACATGTTATCTCTTTCTTT+AGG | + | chr6.1:62336567-62336586 | None:intergenic | 25.0% |
| ! | AACATTAGCAATTTAACTAC+TGG | - | chr6.1:62337727-62337746 | MS.gene83279:CDS | 25.0% |
| ! | ATAAAACAATTCACATGTCT+TGG | - | chr6.1:62338674-62338693 | MS.gene83279:CDS | 25.0% |
| ! | ATAAATAAACACGAACTTGT+AGG | - | chr6.1:62339295-62339314 | MS.gene83279:CDS | 25.0% |
| ! | ATATAATATGATGCTATAGG+TGG | + | chr6.1:62338795-62338814 | None:intergenic | 25.0% |
| ! | ATCTACTTATGTTATCTTAG+TGG | + | chr6.1:62335747-62335766 | None:intergenic | 25.0% |
| ! | ATTGTTCATGTCATTGATAT+TGG | - | chr6.1:62335828-62335847 | MS.gene83279:CDS | 25.0% |
| ! | CTTTCATAACTTAACGAAAA+AGG | + | chr6.1:62339724-62339743 | None:intergenic | 25.0% |
| ! | CTTTGATATCAAAAAAGAGT+CGG | + | chr6.1:62337331-62337350 | None:intergenic | 25.0% |
| ! | GAGTATTTAGATAAGCAATT+AGG | - | chr6.1:62338364-62338383 | MS.gene83279:intron | 25.0% |
| ! | GTCAAATTAACCAAGTAATT+GGG | - | chr6.1:62336341-62336360 | MS.gene83279:intron | 25.0% |
| ! | GTTTCTCTTATAGTTATTCT+AGG | + | chr6.1:62335547-62335566 | None:intergenic | 25.0% |
| ! | TAGAAGAAGCCAAAAAAAAT+TGG | - | chr6.1:62340827-62340846 | MS.gene83279:intron | 25.0% |
| ! | TCAAAACCTTTATTAGAAAG+TGG | - | chr6.1:62340556-62340575 | MS.gene83279:intron | 25.0% |
| ! | TCAAATAAACCAATTCAAAC+AGG | - | chr6.1:62340030-62340049 | MS.gene83279:CDS | 25.0% |
| ! | TCAACTGCATATATTCATAT+AGG | + | chr6.1:62337407-62337426 | None:intergenic | 25.0% |
| ! | TCTACATTTGAATTAATGGA+AGG | - | chr6.1:62337687-62337706 | MS.gene83279:CDS | 25.0% |
| ! | TGCTAAATAACTATGTAAAG+TGG | - | chr6.1:62339188-62339207 | MS.gene83279:CDS | 25.0% |
| ! | TGTCAAATTAACCAAGTAAT+TGG | - | chr6.1:62336340-62336359 | MS.gene83279:intron | 25.0% |
| ! | TGTCATACTTCATATGATTA+TGG | - | chr6.1:62336604-62336623 | MS.gene83279:intron | 25.0% |
| ! | TTCAAAAAATATTTCTCGTG+TGG | - | chr6.1:62338918-62338937 | MS.gene83279:CDS | 25.0% |
| ! | TTCTTAATAATGAAAGAACG+GGG | + | chr6.1:62339166-62339185 | None:intergenic | 25.0% |
| ! | TTGTTCATGTCATTGATATT+GGG | - | chr6.1:62335829-62335848 | MS.gene83279:CDS | 25.0% |
| ! | TTTCTTAAAGTCATTTCTGA+AGG | + | chr6.1:62340093-62340112 | None:intergenic | 25.0% |
| ! | TTTGATATCAAAAAAGAGTC+GGG | + | chr6.1:62337330-62337349 | None:intergenic | 25.0% |
| !! | ATCAATACCAAACTTTTCAT+CGG | + | chr6.1:62337276-62337295 | None:intergenic | 25.0% |
| !! | TATTATATCCTTTTAGCAAC+AGG | - | chr6.1:62337575-62337594 | MS.gene83279:intron | 25.0% |
| !!! | AATTTTTATTTCTCTTCTGC+AGG | - | chr6.1:62340186-62340205 | MS.gene83279:CDS | 25.0% |
| !!! | CTTTTTCGTTAAGTTATGAA+AGG | - | chr6.1:62339722-62339741 | MS.gene83279:intron | 25.0% |
| !!! | GTAAATTTTTCTAGCACTTT+TGG | - | chr6.1:62338735-62338754 | MS.gene83279:CDS | 25.0% |
| !!! | TATTTTGTTATGGTAAGTGA+TGG | - | chr6.1:62338049-62338068 | MS.gene83279:intron | 25.0% |
| !!! | TCACTTCTTCCAATTTTTTT+TGG | + | chr6.1:62340839-62340858 | None:intergenic | 25.0% |
| !!! | TCCCTTTTTCCAATTTTTTT+CGG | + | chr6.1:62340757-62340776 | None:intergenic | 25.0% |
| !!! | TCTTAAAGAAGTGTTGTAAA+CGG | - | chr6.1:62336470-62336489 | MS.gene83279:CDS | 25.0% |
| !!! | TTTTTTTACATTTGTCACAC+TGG | - | chr6.1:62338835-62338854 | MS.gene83279:CDS | 25.0% |
| AAAGAAAACTGAGAAACTTC+GGG | - | chr6.1:62337097-62337116 | MS.gene83279:intron | 30.0% | |
| AACAGACAGAAAAATGACTT+TGG | + | chr6.1:62337247-62337266 | None:intergenic | 30.0% | |
| ACAAGAAACTAGTGATTTGA+AGG | - | chr6.1:62340585-62340604 | MS.gene83279:intron | 30.0% | |
| ACAATGTCCTCTGTAAAAAA+TGG | + | chr6.1:62338081-62338100 | None:intergenic | 30.0% | |
| AGAGATAACATGTTATAGCT+TGG | - | chr6.1:62336573-62336592 | MS.gene83279:intron | 30.0% | |
| AGCACTTATATCTAGATATC+AGG | + | chr6.1:62338953-62338972 | None:intergenic | 30.0% | |
| AGCCGAAAAAAATTGGAAAA+AGG | - | chr6.1:62340752-62340771 | MS.gene83279:intron | 30.0% | |
| AGTCAATAGTTATGCACAAA+GGG | - | chr6.1:62340061-62340080 | MS.gene83279:CDS | 30.0% | |
| ATAAAACAGCGTAGTCAAAT+AGG | + | chr6.1:62338004-62338023 | None:intergenic | 30.0% | |
| ATATTACCATACTTCCTAAC+AGG | + | chr6.1:62335981-62336000 | None:intergenic | 30.0% | |
| ATCTAAAAACTCAAGCTTTC+TGG | - | chr6.1:62338597-62338616 | MS.gene83279:intron | 30.0% | |
| ATGAAAGAGAAAAACTCCAA+TGG | - | chr6.1:62336847-62336866 | MS.gene83279:intron | 30.0% | |
| ATGTCATTGATATTGGGTTT+GGG | - | chr6.1:62335835-62335854 | MS.gene83279:CDS | 30.0% | |
| ATTCTCATAATCATTAACCG+AGG | - | chr6.1:62336643-62336662 | MS.gene83279:intron | 30.0% | |
| CAATATTGGAGATTGAAACA+AGG | - | chr6.1:62338254-62338273 | MS.gene83279:intron | 30.0% | |
| CATTCTCTCAACAATCTTAA+AGG | + | chr6.1:62337784-62337803 | None:intergenic | 30.0% | |
| CATTTGAATTAATGGAAGGA+AGG | - | chr6.1:62337691-62337710 | MS.gene83279:CDS | 30.0% | |
| CTCCTACAAAAAAATGGTAA+TGG | - | chr6.1:62336096-62336115 | MS.gene83279:intron | 30.0% | |
| CTGTTCATTTCTATAAACGA+AGG | + | chr6.1:62340144-62340163 | None:intergenic | 30.0% | |
| GATTCAAAGCCGAAAAAAAT+TGG | - | chr6.1:62340745-62340764 | MS.gene83279:intron | 30.0% | |
| GCCGAAAAAAATTGGAAAAA+GGG | - | chr6.1:62340753-62340772 | MS.gene83279:intron | 30.0% | |
| GTTACATCATGAACAACTAA+AGG | - | chr6.1:62339344-62339363 | MS.gene83279:intron | 30.0% | |
| GTTTGGTTATTGCTATCAAT+TGG | + | chr6.1:62340358-62340377 | None:intergenic | 30.0% | |
| TAAAACAGCGTAGTCAAATA+GGG | + | chr6.1:62338003-62338022 | None:intergenic | 30.0% | |
| TAGATCAGATGAAGTATAGT+CGG | - | chr6.1:62335500-62335519 | MS.gene83279:CDS | 30.0% | |
| TAGTAGAAAATAGGCTTAGA+TGG | - | chr6.1:62335453-62335472 | MS.gene83279:CDS | 30.0% | |
| TAGTCAATAGTTATGCACAA+AGG | - | chr6.1:62340060-62340079 | MS.gene83279:CDS | 30.0% | |
| TCGTTTATAGAAATGAACAG+AGG | - | chr6.1:62340144-62340163 | MS.gene83279:CDS | 30.0% | |
| TCTCAACAATCTTAAAGGAA+TGG | + | chr6.1:62337779-62337798 | None:intergenic | 30.0% | |
| TCTTAATAATGAAAGAACGG+GGG | + | chr6.1:62339165-62339184 | None:intergenic | 30.0% | |
| TGGTAGAAAAGATTGTAGTA+AGG | - | chr6.1:62335473-62335492 | MS.gene83279:CDS | 30.0% | |
| TGTAGGTGAAAACATTTGAA+TGG | - | chr6.1:62339312-62339331 | MS.gene83279:CDS | 30.0% | |
| TGTGTAGTACATAATTTCCT+CGG | + | chr6.1:62336663-62336682 | None:intergenic | 30.0% | |
| ! | AAATGATTTAGAGTTCACGA+AGG | + | chr6.1:62339220-62339239 | None:intergenic | 30.0% |
| ! | AAGGAAAAAAGAGGTTTTTG+AGG | - | chr6.1:62335950-62335969 | MS.gene83279:intron | 30.0% |
| ! | AATCACTAGTTTCTTGTTGT+TGG | + | chr6.1:62340582-62340601 | None:intergenic | 30.0% |
| ! | AGGAAGTATGGTAATATCAA+AGG | - | chr6.1:62335984-62336003 | MS.gene83279:intron | 30.0% |
| ! | ATATTCTGGAAGTGCAATAT+TGG | - | chr6.1:62338240-62338259 | MS.gene83279:intron | 30.0% |
| ! | GCATAACTATTGACTACTTA+GGG | + | chr6.1:62340056-62340075 | None:intergenic | 30.0% |
| ! | GTGGTTTTCAACAGTTTTTT+TGG | - | chr6.1:62338870-62338889 | MS.gene83279:CDS | 30.0% |
| ! | TAGTACTTACGCATTCATTT+TGG | - | chr6.1:62337536-62337555 | MS.gene83279:intron | 30.0% |
| ! | TCTTTTATGAAACCAACAGT+AGG | - | chr6.1:62336930-62336949 | MS.gene83279:intron | 30.0% |
| ! | TGCATAACTATTGACTACTT+AGG | + | chr6.1:62340057-62340076 | None:intergenic | 30.0% |
| ! | TTTCCTCACCTACATTTTAA+CGG | + | chr6.1:62338528-62338547 | None:intergenic | 30.0% |
| ! | TTTTTCTCCCGTTAAAATGT+AGG | - | chr6.1:62338517-62338536 | MS.gene83279:intron | 30.0% |
| ! | TTTTTCTCTTTCATCACATG+AGG | + | chr6.1:62336841-62336860 | None:intergenic | 30.0% |
| !! | AAAAATGGTAATGGTGTTTG+TGG | - | chr6.1:62336105-62336124 | MS.gene83279:intron | 30.0% |
| !! | AAGCTTGAGTTTTTAGATGA+AGG | + | chr6.1:62338595-62338614 | None:intergenic | 30.0% |
| !! | ACCATTTTTCATATAGCTAG+TGG | + | chr6.1:62337144-62337163 | None:intergenic | 30.0% |
| !! | CTCTTCAGTTTTTCTTGTTT+CGG | + | chr6.1:62340430-62340449 | None:intergenic | 30.0% |
| !! | CTTAAAGAAGTGTTGTAAAC+GGG | - | chr6.1:62336471-62336490 | MS.gene83279:CDS | 30.0% |
| !! | GAAAAGTTTGGTATTGATGA+GGG | - | chr6.1:62337278-62337297 | MS.gene83279:intron | 30.0% |
| !! | TGAAAAGTTTGGTATTGATG+AGG | - | chr6.1:62337277-62337296 | MS.gene83279:intron | 30.0% |
| !! | TGTCTTGGTTTTTAAAAGAG+AGG | - | chr6.1:62338689-62338708 | MS.gene83279:CDS | 30.0% |
| !!! | CACCATTACCATTTTTTTGT+AGG | + | chr6.1:62336101-62336120 | None:intergenic | 30.0% |
| !!! | CGACTCTTTTTTGATATCAA+AGG | - | chr6.1:62337329-62337348 | MS.gene83279:intron | 30.0% |
| !!! | TATTTATTTTTTGGGGGGAA+GGG | + | chr6.1:62339278-62339297 | None:intergenic | 30.0% |
| !!! | TGACTACGCTGTTTTATTTA+CGG | - | chr6.1:62338007-62338026 | MS.gene83279:intron | 30.0% |
| !!! | TTATTTATTTTTTGGGGGGA+AGG | + | chr6.1:62339279-62339298 | None:intergenic | 30.0% |
| AAAAACTCAAGCTTTCTGGA+TGG | - | chr6.1:62338601-62338620 | MS.gene83279:intron | 35.0% | |
| AAAAAGATGATTGGGTTCCT+CGG | - | chr6.1:62340275-62340294 | MS.gene83279:intron | 35.0% | |
| AAAGCAACCAATGGGAAAAA+AGG | + | chr6.1:62339138-62339157 | None:intergenic | 35.0% | |
| AAGTTTCATTCCCAGATTCT+TGG | + | chr6.1:62340327-62340346 | None:intergenic | 35.0% | |
| AATAGAAAGGGCTACTAAGA+CGG | - | chr6.1:62336968-62336987 | MS.gene83279:CDS | 35.0% | |
| AATGTATTAGTGCTCATGCA+TGG | - | chr6.1:62338636-62338655 | MS.gene83279:intron | 35.0% | |
| ACACTGGAAATGAAATCATG+TGG | - | chr6.1:62338851-62338870 | MS.gene83279:CDS | 35.0% | |
| AGAAACTGAGTTCAATTCCT+GGG | - | chr6.1:62336407-62336426 | MS.gene83279:CDS | 35.0% | |
| AGAGGTGAAAAGGAAAAAAG+AGG | - | chr6.1:62335941-62335960 | MS.gene83279:intron | 35.0% | |
| ATAGATTTCCATCTTGATCC+AGG | + | chr6.1:62339061-62339080 | None:intergenic | 35.0% | |
| ATATGGATCAACCAAGAATC+TGG | - | chr6.1:62340313-62340332 | MS.gene83279:intron | 35.0% | |
| ATATTTAGGGAGCAATGAGT+TGG | - | chr6.1:62335576-62335595 | MS.gene83279:CDS | 35.0% | |
| ATTGAAACAAGGCTAGAAGT+TGG | - | chr6.1:62338265-62338284 | MS.gene83279:intron | 35.0% | |
| CATGCATGGAAACATATTTG+TGG | - | chr6.1:62338650-62338669 | MS.gene83279:intron | 35.0% | |
| CATGTCATTGATATTGGGTT+TGG | - | chr6.1:62335834-62335853 | MS.gene83279:CDS | 35.0% | |
| CTTAATAATGAAAGAACGGG+GGG | + | chr6.1:62339164-62339183 | None:intergenic | 35.0% | |
| GATAGCAATAACCAAACTTC+TGG | - | chr6.1:62340361-62340380 | MS.gene83279:intron | 35.0% | |
| GATCATCAAAAGAGGTGAAA+AGG | - | chr6.1:62335931-62335950 | MS.gene83279:intron | 35.0% | |
| GCCACTAGCTATATGAAAAA+TGG | - | chr6.1:62337140-62337159 | MS.gene83279:intron | 35.0% | |
| GCTGAAAAAGAGAAACTTGA+CGG | + | chr6.1:62340502-62340521 | None:intergenic | 35.0% | |
| GTCAATAGTTATGCACAAAG+GGG | - | chr6.1:62340062-62340081 | MS.gene83279:CDS | 35.0% | |
| GTCTGTACAGATATCAACAT+GGG | - | chr6.1:62338136-62338155 | MS.gene83279:intron | 35.0% | |
| TATGGATCAACCAAGAATCT+GGG | - | chr6.1:62340314-62340333 | MS.gene83279:intron | 35.0% | |
| TATTTCAGCGTTGTCAATTG+CGG | - | chr6.1:62337816-62337835 | MS.gene83279:CDS | 35.0% | |
| TCAAAAGGTTCCTATCACTT+TGG | - | chr6.1:62339506-62339525 | MS.gene83279:intron | 35.0% | |
| TCAACACTTAATCCTACTGT+TGG | + | chr6.1:62336945-62336964 | None:intergenic | 35.0% | |
| TCCTATCACTTTGGCAATAA+GGG | - | chr6.1:62339515-62339534 | MS.gene83279:intron | 35.0% | |
| TCTGTACAGATATCAACATG+GGG | - | chr6.1:62338137-62338156 | MS.gene83279:intron | 35.0% | |
| TCTTGGTTGATCCATATGAA+AGG | + | chr6.1:62340310-62340329 | None:intergenic | 35.0% | |
| TGGTTATTGCTATCAATTGG+AGG | + | chr6.1:62340355-62340374 | None:intergenic | 35.0% | |
| TGTGGAAAGATCATCAAAAG+AGG | - | chr6.1:62335923-62335942 | MS.gene83279:intron | 35.0% | |
| TTCAACTTGGAATCATCTGT+TGG | - | chr6.1:62339630-62339649 | MS.gene83279:intron | 35.0% | |
| TTCCAATCACCATCTTCTTT+AGG | + | chr6.1:62338421-62338440 | None:intergenic | 35.0% | |
| TTCCTATCACTTTGGCAATA+AGG | - | chr6.1:62339514-62339533 | MS.gene83279:intron | 35.0% | |
| TTCTTTGACACATCTGCAAA+GGG | + | chr6.1:62339010-62339029 | None:intergenic | 35.0% | |
| TTGATGAGGGAACATTATGT+TGG | - | chr6.1:62337291-62337310 | MS.gene83279:intron | 35.0% | |
| ! | AACAGTAGGATTAAGTGTTG+AGG | - | chr6.1:62336944-62336963 | MS.gene83279:intron | 35.0% |
| ! | ATTGATATTGGGTTTGGGTT+TGG | - | chr6.1:62335840-62335859 | MS.gene83279:intron | 35.0% |
| ! | CAATGAGTTGGATCGAAATA+TGG | - | chr6.1:62335588-62335607 | MS.gene83279:CDS | 35.0% |
| ! | CAGTTTTCTTTTTGTCTTCG+CGG | + | chr6.1:62337088-62337107 | None:intergenic | 35.0% |
| ! | CATAAAGAGTTTTGCTTCCA+TGG | + | chr6.1:62336764-62336783 | None:intergenic | 35.0% |
| ! | GAAGGTTTCAAAGTACTTTG+TGG | - | chr6.1:62335905-62335924 | MS.gene83279:intron | 35.0% |
| ! | TCCAAGTTGAAGTCTATATC+AGG | + | chr6.1:62339621-62339640 | None:intergenic | 35.0% |
| ! | TGTTGGCCACTTTCTAATAA+AGG | + | chr6.1:62340565-62340584 | None:intergenic | 35.0% |
| ! | TTGATATTGGGTTTGGGTTT+GGG | - | chr6.1:62335841-62335860 | MS.gene83279:intron | 35.0% |
| !! | AAAAAAGTACCCGATCAAAG+TGG | - | chr6.1:62336716-62336735 | MS.gene83279:intron | 35.0% |
| !! | AAGTACTTTGAAACCTTCTC+TGG | + | chr6.1:62335903-62335922 | None:intergenic | 35.0% |
| !! | AAGTGTTGAGGCAATAGAAA+GGG | - | chr6.1:62336956-62336975 | MS.gene83279:CDS | 35.0% |
| !! | AGTTTTTCTTGTTTCGGTTC+TGG | + | chr6.1:62340424-62340443 | None:intergenic | 35.0% |
| !! | ATTTGTTATCCAAGCCAACT+CGG | + | chr6.1:62337049-62337068 | None:intergenic | 35.0% |
| !! | TAAGTGTTGAGGCAATAGAA+AGG | - | chr6.1:62336955-62336974 | MS.gene83279:CDS | 35.0% |
| !! | TGTTTTTGAGCACTTTCATG+TGG | - | chr6.1:62339383-62339402 | MS.gene83279:intron | 35.0% |
| !! | TTCCTCACCTACATTTTAAC+GGG | + | chr6.1:62338527-62338546 | None:intergenic | 35.0% |
| !!! | ATTTATTTTTTGGGGGGAAG+GGG | + | chr6.1:62339277-62339296 | None:intergenic | 35.0% |
| !!! | GTCTTCTCCATTTTTTACAG+AGG | - | chr6.1:62338071-62338090 | MS.gene83279:intron | 35.0% |
| !!! | TCTCTTTTTCAGCAGCAATA+AGG | - | chr6.1:62340509-62340528 | MS.gene83279:intron | 35.0% |
| !!! | TTTTTGAGGTTTCTCCTGTT+AGG | - | chr6.1:62335964-62335983 | MS.gene83279:intron | 35.0% |
| AACCTGAATTCTCTCTTGCA+CGG | + | chr6.1:62337375-62337394 | None:intergenic | 40.0% | |
| AAGCAATTAGGTCTTGCAGA+AGG | - | chr6.1:62338376-62338395 | MS.gene83279:intron | 40.0% | |
| AAGTATAGTCGGATCACTAG+AGG | - | chr6.1:62335511-62335530 | MS.gene83279:CDS | 40.0% | |
| AATGTTCCACCCTGTATCAT+TGG | - | chr6.1:62338160-62338179 | MS.gene83279:intron | 40.0% | |
| ACCCTTATTGCCAAAGTGAT+AGG | + | chr6.1:62339519-62339538 | None:intergenic | 40.0% | |
| AGCAATAACCAAACTTCTGG+TGG | - | chr6.1:62340364-62340383 | MS.gene83279:intron | 40.0% | |
| AGCCTAAAGAAGATGGTGAT+TGG | - | chr6.1:62338416-62338435 | MS.gene83279:intron | 40.0% | |
| AGCTTGAACCTGTTGCTAAA+AGG | + | chr6.1:62337586-62337605 | None:intergenic | 40.0% | |
| AGGAGGGAGTTATAAAGAGA+TGG | + | chr6.1:62339118-62339137 | None:intergenic | 40.0% | |
| AGGATGCAAGCACATCATAA+AGG | + | chr6.1:62336547-62336566 | None:intergenic | 40.0% | |
| ATATTCGATGTCAACCTCCA+AGG | + | chr6.1:62338224-62338243 | None:intergenic | 40.0% | |
| ATATTTCTCGTGTGGACAAG+TGG | - | chr6.1:62338926-62338945 | MS.gene83279:CDS | 40.0% | |
| ATGCCTACGCTTTCACTATT+TGG | + | chr6.1:62340238-62340257 | None:intergenic | 40.0% | |
| ATGTTCCACCCTGTATCATT+GGG | - | chr6.1:62338161-62338180 | MS.gene83279:intron | 40.0% | |
| CAACCAATGGGAAAAAAGGA+GGG | + | chr6.1:62339134-62339153 | None:intergenic | 40.0% | |
| CAAGCGCTCCTACAAAAAAA+TGG | - | chr6.1:62336090-62336109 | MS.gene83279:intron | 40.0% | |
| CATACAACCATTCAGCTCAA+AGG | - | chr6.1:62336041-62336060 | MS.gene83279:intron | 40.0% | |
| CGTCTGTACAGATATCAACA+TGG | - | chr6.1:62338135-62338154 | MS.gene83279:intron | 40.0% | |
| CTCCTGAACAATTCGTCTTT+CGG | + | chr6.1:62336389-62336408 | None:intergenic | 40.0% | |
| CTTAAAGGAATGGAGTTTGC+TGG | + | chr6.1:62337769-62337788 | None:intergenic | 40.0% | |
| CTTATCCCACTAAATGGAGT+CGG | + | chr6.1:62335653-62335672 | None:intergenic | 40.0% | |
| CTTCTTTGACACATCTGCAA+AGG | + | chr6.1:62339011-62339030 | None:intergenic | 40.0% | |
| GAAACCATACCACAGTTGAT+CGG | + | chr6.1:62339589-62339608 | None:intergenic | 40.0% | |
| GAACTATTTGTACCTTGAGC+CGG | + | chr6.1:62339701-62339720 | None:intergenic | 40.0% | |
| GAAGATGGTGATTGGAACAA+TGG | - | chr6.1:62338424-62338443 | MS.gene83279:intron | 40.0% | |
| GACTCCATTTAGTGGGATAA+GGG | - | chr6.1:62335652-62335671 | MS.gene83279:CDS | 40.0% | |
| GAGAAACTGAGTTCAATTCC+TGG | - | chr6.1:62336406-62336425 | MS.gene83279:CDS | 40.0% | |
| GAGGTTGACATCGAATATTC+TGG | - | chr6.1:62338226-62338245 | MS.gene83279:intron | 40.0% | |
| GCCTGATATAGACTTCAACT+TGG | - | chr6.1:62339617-62339636 | MS.gene83279:intron | 40.0% | |
| GCTAGCGGAAAAAGATGATT+GGG | - | chr6.1:62340267-62340286 | MS.gene83279:intron | 40.0% | |
| GGAATGTTGCACCTTTCATA+TGG | - | chr6.1:62340296-62340315 | MS.gene83279:intron | 40.0% | |
| GTTCAAATTGGCTATGCTAC+AGG | - | chr6.1:62337859-62337878 | MS.gene83279:CDS | 40.0% | |
| GTTTCTCCTGTTAGGAAGTA+TGG | - | chr6.1:62335972-62335991 | MS.gene83279:intron | 40.0% | |
| GTTTCTTCAGGGTGTAGTTT+GGG | - | chr6.1:62335869-62335888 | MS.gene83279:intron | 40.0% | |
| TACTTAGGGCCTGTTTGAAT+TGG | + | chr6.1:62340042-62340061 | None:intergenic | 40.0% | |
| TAGTGGCTAAAACTGCATCT+TGG | + | chr6.1:62337127-62337146 | None:intergenic | 40.0% | |
| TCGTCTGATATGGAACTTCT+CGG | + | chr6.1:62337182-62337201 | None:intergenic | 40.0% | |
| TCTGACACCGATGAAAAGTT+TGG | - | chr6.1:62337266-62337285 | MS.gene83279:intron | 40.0% | |
| TGCCTACGCTTTCACTATTT+GGG | + | chr6.1:62340237-62340256 | None:intergenic | 40.0% | |
| TGCTAGCGGAAAAAGATGAT+TGG | - | chr6.1:62340266-62340285 | MS.gene83279:intron | 40.0% | |
| TGCTTGAGAATCTGATTTCC+TGG | + | chr6.1:62340476-62340495 | None:intergenic | 40.0% | |
| TTTCATCACATGAGGCCAAA+CGG | + | chr6.1:62336833-62336852 | None:intergenic | 40.0% | |
| ! | AACAAATGGACTTCACTCTC+AGG | - | chr6.1:62337062-62337081 | MS.gene83279:intron | 40.0% |
| ! | AGGGATGATGATGATAGTGA+TGG | + | chr6.1:62337209-62337228 | None:intergenic | 40.0% |
| ! | GCTCTCATAAAGCATTCAGA+TGG | - | chr6.1:62338970-62338989 | MS.gene83279:CDS | 40.0% |
| ! | GTCCTGTTTTCCACTTTGAT+CGG | + | chr6.1:62336729-62336748 | None:intergenic | 40.0% |
| ! | GTTCGAGAAGGAATTTTGGA+AGG | + | chr6.1:62338773-62338792 | None:intergenic | 40.0% |
| ! | TCCTGTTTTCCACTTTGATC+GGG | + | chr6.1:62336728-62336747 | None:intergenic | 40.0% |
| ! | TCGTGGTCACTTTCTAATGA+AGG | + | chr6.1:62340622-62340641 | None:intergenic | 40.0% |
| ! | TGATATTGGGTTTGGGTTTG+GGG | - | chr6.1:62335842-62335861 | MS.gene83279:intron | 40.0% |
| ! | TTGCTTTGTTCCTGATCAAC+CGG | - | chr6.1:62339679-62339698 | MS.gene83279:intron | 40.0% |
| ! | TTTGTTATCCAAGCCAACTC+GGG | + | chr6.1:62337048-62337067 | None:intergenic | 40.0% |
| !! | GAGTTGGCTTGGATAACAAA+TGG | - | chr6.1:62337048-62337067 | MS.gene83279:intron | 40.0% |
| !! | TAGCACTTTTGGTGATAGCA+GGG | - | chr6.1:62338746-62338765 | MS.gene83279:CDS | 40.0% |
| !!! | TTGGGTTTTAGAACCAGAGA+AGG | - | chr6.1:62335887-62335906 | MS.gene83279:intron | 40.0% |
| !!! | TTTTTTTGTAGGAGCGCTTG+TGG | + | chr6.1:62336090-62336109 | None:intergenic | 40.0% |
| AAAAACGCAGTGTCCCTCTT+AGG | + | chr6.1:62339548-62339567 | None:intergenic | 45.0% | |
| AAAACGCAGTGTCCCTCTTA+GGG | + | chr6.1:62339547-62339566 | None:intergenic | 45.0% | |
| AAAGCTAGTGCAAAGACCTC+AGG | - | chr6.1:62340391-62340410 | MS.gene83279:intron | 45.0% | |
| AACCCTCATCCCAATGATAC+AGG | + | chr6.1:62338173-62338192 | None:intergenic | 45.0% | |
| AACTGAGTTCAATTCCTGGG+TGG | - | chr6.1:62336410-62336429 | MS.gene83279:CDS | 45.0% | |
| AATCCCGTGTCGAACAATGT+TGG | - | chr6.1:62338310-62338329 | MS.gene83279:intron | 45.0% | |
| ACCAAGTAATTGGGCTCAAG+TGG | - | chr6.1:62336350-62336369 | MS.gene83279:intron | 45.0% | |
| ACCACTTGAGCCCAATTACT+TGG | + | chr6.1:62336354-62336373 | None:intergenic | 45.0% | |
| ACCCGATCAAAGTGGAAAAC+AGG | - | chr6.1:62336724-62336743 | MS.gene83279:intron | 45.0% | |
| ACCCTCATCCCAATGATACA+GGG | + | chr6.1:62338172-62338191 | None:intergenic | 45.0% | |
| ACCCTGTATCATTGGGATGA+GGG | - | chr6.1:62338168-62338187 | MS.gene83279:intron | 45.0% | |
| ACTAAATGGAGTCGGCTACA+TGG | + | chr6.1:62335645-62335664 | None:intergenic | 45.0% | |
| AGACCCAACATTGTTCGACA+CGG | + | chr6.1:62338317-62338336 | None:intergenic | 45.0% | |
| AGGACCTCTGTGATATACCA+TGG | - | chr6.1:62336744-62336763 | MS.gene83279:intron | 45.0% | |
| ATAAGGGTAGCATCCCTAAG+AGG | - | chr6.1:62339531-62339550 | MS.gene83279:intron | 45.0% | |
| ATATGCGGGAGTTCTCATGT+TGG | + | chr6.1:62338104-62338123 | None:intergenic | 45.0% | |
| ATCCCGTGTCGAACAATGTT+GGG | - | chr6.1:62338311-62338330 | MS.gene83279:intron | 45.0% | |
| ATCCGTGCAAGAGAGAATTC+AGG | - | chr6.1:62337370-62337389 | MS.gene83279:intron | 45.0% | |
| ATGAGAACTCCCGCATATGT+CGG | - | chr6.1:62338106-62338125 | MS.gene83279:intron | 45.0% | |
| ATGCTATAGGTGGTTCGAGA+AGG | + | chr6.1:62338785-62338804 | None:intergenic | 45.0% | |
| ATGGTTGTATGCGATCCATC+AGG | + | chr6.1:62336032-62336051 | None:intergenic | 45.0% | |
| CACCGAAAGACGAATTGTTC+AGG | - | chr6.1:62336384-62336403 | MS.gene83279:CDS | 45.0% | |
| CACTAAACAGCGTCGTATAG+TGG | - | chr6.1:62337920-62337939 | MS.gene83279:CDS | 45.0% | |
| CATACCTCGCTCATTTCCAT+CGG | + | chr6.1:62338199-62338218 | None:intergenic | 45.0% | |
| CCAACCCTTATCCCACTAAA+TGG | + | chr6.1:62335659-62335678 | None:intergenic | 45.0% | |
| CCATTTAGTGGGATAAGGGT+TGG | - | chr6.1:62335656-62335675 | MS.gene83279:CDS | 45.0% | |
| CGACTCCATTTAGTGGGATA+AGG | - | chr6.1:62335651-62335670 | MS.gene83279:CDS | 45.0% | |
| CTCCCGTTAAAATGTAGGTG+AGG | - | chr6.1:62338522-62338541 | MS.gene83279:intron | 45.0% | |
| CTTGCAACTGCGAATACCAT+TGG | + | chr6.1:62336866-62336885 | None:intergenic | 45.0% | |
| CTTTCACTCCACCAGAAGTT+TGG | + | chr6.1:62340375-62340394 | None:intergenic | 45.0% | |
| GAACAAAGCAATGCGCGTAT+TGG | + | chr6.1:62339670-62339689 | None:intergenic | 45.0% | |
| GATGCATCCTTTGAGCTGAA+TGG | + | chr6.1:62336051-62336070 | None:intergenic | 45.0% | |
| GCAACCAATGGGAAAAAAGG+AGG | + | chr6.1:62339135-62339154 | None:intergenic | 45.0% | |
| GCTTCCATGGTATATCACAG+AGG | + | chr6.1:62336751-62336770 | None:intergenic | 45.0% | |
| GGGGGAAAAAAGCAACCAAT+GGG | + | chr6.1:62339146-62339165 | None:intergenic | 45.0% | |
| GGTTTCTTCAGGGTGTAGTT+TGG | - | chr6.1:62335868-62335887 | MS.gene83279:intron | 45.0% | |
| GTCAATCAGTTCGACCAGTT+CGG | - | chr6.1:62340711-62340730 | MS.gene83279:intron | 45.0% | |
| TAAGGGTAGCATCCCTAAGA+GGG | - | chr6.1:62339532-62339551 | MS.gene83279:intron | 45.0% | |
| TCCATCACTGCACTATTCGA+AGG | + | chr6.1:62340688-62340707 | None:intergenic | 45.0% | |
| TCGCAAGAGCCTAAAGAAGA+TGG | - | chr6.1:62338409-62338428 | MS.gene83279:intron | 45.0% | |
| TGAGAATCTGATTTCCTGGC+TGG | + | chr6.1:62340472-62340491 | None:intergenic | 45.0% | |
| TGAGACTTCGTCTGAGAAAG+AGG | - | chr6.1:62336791-62336810 | MS.gene83279:intron | 45.0% | |
| TGGTACCTGTGAAACATGCT+TGG | + | chr6.1:62339098-62339117 | None:intergenic | 45.0% | |
| TGTTGCCAAGCATGTTTCAC+AGG | - | chr6.1:62339090-62339109 | MS.gene83279:CDS | 45.0% | |
| ! | ATGAAAGGTGCAACATTCCG+AGG | + | chr6.1:62340295-62340314 | None:intergenic | 45.0% |
| ! | ATGTAGCCGACTCCATTTAG+TGG | - | chr6.1:62335644-62335663 | MS.gene83279:CDS | 45.0% |
| ! | CAAAAACTGACGGACCTTTG+AGG | + | chr6.1:62337003-62337022 | None:intergenic | 45.0% |
| ! | CTCCCAAATAGTGAAAGCGT+AGG | - | chr6.1:62340232-62340251 | MS.gene83279:intron | 45.0% |
| ! | GGTGGTTCGAGAAGGAATTT+TGG | + | chr6.1:62338777-62338796 | None:intergenic | 45.0% |
| ! | GTTGGTGAGCTAGAGAAAGA+GGG | - | chr6.1:62338283-62338302 | MS.gene83279:intron | 45.0% |
| ! | TGAGAAAGAGGCATGGTGTA+AGG | - | chr6.1:62336803-62336822 | MS.gene83279:intron | 45.0% |
| ! | TGTAGCCGACTCCATTTAGT+GGG | - | chr6.1:62335645-62335664 | MS.gene83279:CDS | 45.0% |
| ! | TTTGGGGTTGGGTTTCTTCA+GGG | - | chr6.1:62335858-62335877 | MS.gene83279:intron | 45.0% |
| !! | AGCACTTTTGGTGATAGCAG+GGG | - | chr6.1:62338747-62338766 | MS.gene83279:CDS | 45.0% |
| !! | AGTTGGTGAGCTAGAGAAAG+AGG | - | chr6.1:62338282-62338301 | MS.gene83279:intron | 45.0% |
| !! | CGAATAGTGCAGTGATGGAT+AGG | - | chr6.1:62340689-62340708 | MS.gene83279:intron | 45.0% |
| !! | CTAGCACTTTTGGTGATAGC+AGG | - | chr6.1:62338745-62338764 | MS.gene83279:CDS | 45.0% |
| !! | GAGTTTGCTGGACCAAAATG+GGG | + | chr6.1:62337757-62337776 | None:intergenic | 45.0% |
| !! | GGAGTTTGCTGGACCAAAAT+GGG | + | chr6.1:62337758-62337777 | None:intergenic | 45.0% |
| !! | TGATGGAGCATCGTCTGATA+TGG | + | chr6.1:62337192-62337211 | None:intergenic | 45.0% |
| !! | TGGAGTTTGCTGGACCAAAA+TGG | + | chr6.1:62337759-62337778 | None:intergenic | 45.0% |
| !!! | ACTCCCTCCTTTTTTCCCAT+TGG | - | chr6.1:62339128-62339147 | MS.gene83279:CDS | 45.0% |
| !!! | TGTTTATTTATTTATTTTTT+GGG | + | chr6.1:62339286-62339305 | None:intergenic | 5.0% |
| AATCGAGACAAGATCCAGCC+AGG | - | chr6.1:62340455-62340474 | MS.gene83279:intron | 50.0% | |
| AATGAGCGAGGTATGTGCCT+TGG | - | chr6.1:62338204-62338223 | MS.gene83279:intron | 50.0% | |
| ACCATACCACAGTTGATCGG+CGG | + | chr6.1:62339586-62339605 | None:intergenic | 50.0% | |
| ACGACATCACCGACATATGC+GGG | + | chr6.1:62338118-62338137 | None:intergenic | 50.0% | |
| ACGAGAAGATCTTCCCGAGT+TGG | - | chr6.1:62337032-62337051 | MS.gene83279:intron | 50.0% | |
| ACGATGTGATTGTTCCACCC+AGG | + | chr6.1:62336427-62336446 | None:intergenic | 50.0% | |
| AGGCATTCGATGGATGCTAG+CGG | - | chr6.1:62340252-62340271 | MS.gene83279:intron | 50.0% | |
| AGTCGGATCACTAGAGGTAG+AGG | - | chr6.1:62335517-62335536 | MS.gene83279:CDS | 50.0% | |
| ATCACATGAGGCCAAACGGA+GGG | + | chr6.1:62336829-62336848 | None:intergenic | 50.0% | |
| ATCATCCTGTTGAGCCGAAC+TGG | + | chr6.1:62340728-62340747 | None:intergenic | 50.0% | |
| CACCCTGTATCATTGGGATG+AGG | - | chr6.1:62338167-62338186 | MS.gene83279:intron | 50.0% | |
| CGAAGCTAGCGAAGAGAAGA+CGG | - | chr6.1:62340639-62340658 | MS.gene83279:intron | 50.0% | |
| CTCATCCCAATGATACAGGG+TGG | + | chr6.1:62338169-62338188 | None:intergenic | 50.0% | |
| CTCTTCTGCAGGCAGCAATT+CGG | - | chr6.1:62340197-62340216 | MS.gene83279:CDS | 50.0% | |
| CTTCGTCTGAGAAAGAGGCA+TGG | - | chr6.1:62336796-62336815 | MS.gene83279:intron | 50.0% | |
| CTTGTTCTCACTGAGCCTGA+TGG | - | chr6.1:62336014-62336033 | MS.gene83279:intron | 50.0% | |
| GAAAGGGCTACTAAGACGGA+TGG | - | chr6.1:62336972-62336991 | MS.gene83279:CDS | 50.0% | |
| GACCCAACATTGTTCGACAC+GGG | + | chr6.1:62338316-62338335 | None:intergenic | 50.0% | |
| GACGACATCACCGACATATG+CGG | + | chr6.1:62338119-62338138 | None:intergenic | 50.0% | |
| GACGGATGGATCTTCCTCAA+AGG | - | chr6.1:62336986-62337005 | MS.gene83279:CDS | 50.0% | |
| GCCTTCGAATAGTGCAGTGA+TGG | - | chr6.1:62340684-62340703 | MS.gene83279:intron | 50.0% | |
| GCGTTGTCAATTGCGGATCA+CGG | - | chr6.1:62337823-62337842 | MS.gene83279:CDS | 50.0% | |
| GGGGGGAAAAAAGCAACCAA+TGG | + | chr6.1:62339147-62339166 | None:intergenic | 50.0% | |
| TCATCATCCCTGTCTCGTTC+AGG | - | chr6.1:62337218-62337237 | MS.gene83279:intron | 50.0% | |
| TCTTCCGATGGAAATGAGCG+AGG | - | chr6.1:62338192-62338211 | MS.gene83279:intron | 50.0% | |
| TCTTCTGCAGGCAGCAATTC+GGG | - | chr6.1:62340198-62340217 | MS.gene83279:CDS | 50.0% | |
| TTGGCTTCCTGAACGAGACA+GGG | + | chr6.1:62337228-62337247 | None:intergenic | 50.0% | |
| ! | AAGATCTTCCCGAGTTGGCT+TGG | - | chr6.1:62337037-62337056 | MS.gene83279:intron | 50.0% |
| ! | ATTGGGTTTGGGTTTGGGGT+TGG | - | chr6.1:62335846-62335865 | MS.gene83279:intron | 50.0% |
| ! | GTGAAAGCGTAGGCATTCGA+TGG | - | chr6.1:62340242-62340261 | MS.gene83279:intron | 50.0% |
| ! | GTTTGGGGTTGGGTTTCTTC+AGG | - | chr6.1:62335857-62335876 | MS.gene83279:intron | 50.0% |
| ! | TCTTCTCTTCGCTAGCTTCG+TGG | + | chr6.1:62340639-62340658 | None:intergenic | 50.0% |
| ! | TTGGGTTTGGGTTTGGGGTT+GGG | - | chr6.1:62335847-62335866 | MS.gene83279:intron | 50.0% |
| ! | TTTGGCTTCCTGAACGAGAC+AGG | + | chr6.1:62337229-62337248 | None:intergenic | 50.0% |
| !!! | ACTACTGGCTTGCCCCATTT+TGG | - | chr6.1:62337742-62337761 | MS.gene83279:CDS | 50.0% |
| !!! | TATTTTTTGGGGGGAAGGGG+TGG | + | chr6.1:62339274-62339293 | None:intergenic | 50.0% |
| AATGCACCTTCCTCGACTCC+TGG | - | chr6.1:62339040-62339059 | MS.gene83279:CDS | 55.0% | |
| ATGGTGTAAGGCCCTCCGTT+TGG | - | chr6.1:62336815-62336834 | MS.gene83279:intron | 55.0% | |
| CATCACATGAGGCCAAACGG+AGG | + | chr6.1:62336830-62336849 | None:intergenic | 55.0% | |
| CCATACCACAGTTGATCGGC+GGG | + | chr6.1:62339585-62339604 | None:intergenic | 55.0% | |
| CCATCTTGATCCAGGAGTCG+AGG | + | chr6.1:62339053-62339072 | None:intergenic | 55.0% | |
| CCTCGACTCCTGGATCAAGA+TGG | - | chr6.1:62339050-62339069 | MS.gene83279:CDS | 55.0% | |
| CTTGATCCAGGAGTCGAGGA+AGG | + | chr6.1:62339049-62339068 | None:intergenic | 55.0% | |
| GTACCTTGAGCCGGTTGATC+AGG | + | chr6.1:62339692-62339711 | None:intergenic | 55.0% | |
| TGGGATGAGGGTTCTTCCGA+TGG | - | chr6.1:62338180-62338199 | MS.gene83279:intron | 55.0% | |
| TTCGACCAGTTCGGCTCAAC+AGG | - | chr6.1:62340720-62340739 | MS.gene83279:intron | 55.0% | |
| ! | GTTCCTGATCAACCGGCTCA+AGG | - | chr6.1:62339686-62339705 | MS.gene83279:intron | 55.0% |
| !! | CGGTTCTGGACTATCACCTG+AGG | + | chr6.1:62340410-62340429 | None:intergenic | 55.0% |
| CCCGCCGATCAACTGTGGTA+TGG | - | chr6.1:62339582-62339601 | MS.gene83279:intron | 60.0% | |
| GAGCGAGGTATGTGCCTTGG+AGG | - | chr6.1:62338207-62338226 | MS.gene83279:intron | 60.0% | |
| TACCACAGTTGATCGGCGGG+TGG | + | chr6.1:62339582-62339601 | None:intergenic | 60.0% | |
| CACAGTTGATCGGCGGGTGG+CGG | + | chr6.1:62339579-62339598 | None:intergenic | 65.0% | |
| CGCCACCCGCCGATCAACTG+TGG | - | chr6.1:62339577-62339596 | MS.gene83279:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 62335204 | 62340858 | 62335204 | ID=MS.gene83279 |
| chr6.1 | mRNA | 62335204 | 62340858 | 62335204 | ID=MS.gene83279.t1;Parent=MS.gene83279 |
| chr6.1 | exon | 62340850 | 62340858 | 62340850 | ID=MS.gene83279.t1.exon1;Parent=MS.gene83279.t1 |
| chr6.1 | CDS | 62340850 | 62340858 | 62340850 | ID=cds.MS.gene83279.t1;Parent=MS.gene83279.t1 |
| chr6.1 | exon | 62339951 | 62340234 | 62339951 | ID=MS.gene83279.t1.exon2;Parent=MS.gene83279.t1 |
| chr6.1 | CDS | 62339951 | 62340234 | 62339951 | ID=cds.MS.gene83279.t1;Parent=MS.gene83279.t1 |
| chr6.1 | exon | 62338671 | 62339349 | 62338671 | ID=MS.gene83279.t1.exon3;Parent=MS.gene83279.t1 |
| chr6.1 | CDS | 62338671 | 62339349 | 62338671 | ID=cds.MS.gene83279.t1;Parent=MS.gene83279.t1 |
| chr6.1 | exon | 62337617 | 62337971 | 62337617 | ID=MS.gene83279.t1.exon4;Parent=MS.gene83279.t1 |
| chr6.1 | CDS | 62337617 | 62337971 | 62337617 | ID=cds.MS.gene83279.t1;Parent=MS.gene83279.t1 |
| chr6.1 | exon | 62336951 | 62337045 | 62336951 | ID=MS.gene83279.t1.exon5;Parent=MS.gene83279.t1 |
| chr6.1 | CDS | 62336951 | 62337045 | 62336951 | ID=cds.MS.gene83279.t1;Parent=MS.gene83279.t1 |
| chr6.1 | exon | 62336355 | 62336549 | 62336355 | ID=MS.gene83279.t1.exon6;Parent=MS.gene83279.t1 |
| chr6.1 | CDS | 62336355 | 62336549 | 62336355 | ID=cds.MS.gene83279.t1;Parent=MS.gene83279.t1 |
| chr6.1 | exon | 62335204 | 62335854 | 62335204 | ID=MS.gene83279.t1.exon7;Parent=MS.gene83279.t1 |
| chr6.1 | CDS | 62335204 | 62335854 | 62335204 | ID=cds.MS.gene83279.t1;Parent=MS.gene83279.t1 |
| Gene Sequence |
| Protein sequence |
