Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83604.t1 | XP_013465603.1 | 95 | 320 | 9 | 4 | 1 | 317 | 1 | 316 | 7.50E-139 | 503.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83604.t1 | Q9SAH7 | 48.5 | 324 | 129 | 7 | 3 | 317 | 4 | 298 | 4.0e-64 | 246.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83604.t1 | A0A072VC75 | 95.0 | 320 | 9 | 4 | 1 | 317 | 1 | 316 | 5.4e-139 | 503.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene83604.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04998 | MS.gene83604 | 0.866422 | 2.88E-65 | -1.69E-46 |
MS.gene051226 | MS.gene83604 | 0.85313 | 2.93E-61 | -1.69E-46 |
MS.gene051837 | MS.gene83604 | 0.837431 | 5.22E-57 | -1.69E-46 |
MS.gene051959 | MS.gene83604 | 0.810488 | 1.12E-50 | -1.69E-46 |
MS.gene051960 | MS.gene83604 | 0.803694 | 3.08E-49 | -1.69E-46 |
MS.gene053932 | MS.gene83604 | 0.826229 | 3.04E-54 | -1.69E-46 |
MS.gene054617 | MS.gene83604 | 0.811411 | 7.10E-51 | -1.69E-46 |
MS.gene054892 | MS.gene83604 | 0.833763 | 4.42E-56 | -1.69E-46 |
MS.gene054893 | MS.gene83604 | 0.829141 | 6.08E-55 | -1.69E-46 |
MS.gene055549 | MS.gene83604 | 0.808431 | 3.11E-50 | -1.69E-46 |
MS.gene055550 | MS.gene83604 | 0.804396 | 2.20E-49 | -1.69E-46 |
MS.gene055551 | MS.gene83604 | 0.813124 | 3.00E-51 | -1.69E-46 |
MS.gene057093 | MS.gene83604 | 0.87461 | 5.90E-68 | -1.69E-46 |
MS.gene057167 | MS.gene83604 | 0.827226 | 1.76E-54 | -1.69E-46 |
MS.gene057622 | MS.gene83604 | 0.836298 | 1.02E-56 | -1.69E-46 |
MS.gene06023 | MS.gene83604 | 0.838587 | 2.63E-57 | -1.69E-46 |
MS.gene060446 | MS.gene83604 | 0.811099 | 8.29E-51 | -1.69E-46 |
MS.gene060964 | MS.gene83604 | 0.837877 | 4.01E-57 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83604.t1 | MTR_2g105060 | 95.016 | 321 | 7 | 5 | 1 | 317 | 1 | 316 | 0.0 | 611 |
MS.gene83604.t1 | MTR_2g105060 | 96.341 | 246 | 2 | 3 | 74 | 317 | 1 | 241 | 4.96e-174 | 481 |
MS.gene83604.t1 | MTR_4g007060 | 59.816 | 326 | 106 | 8 | 5 | 317 | 4 | 317 | 3.73e-107 | 315 |
MS.gene83604.t1 | MTR_4g007060 | 58.188 | 287 | 100 | 6 | 44 | 317 | 4 | 283 | 8.41e-90 | 270 |
MS.gene83604.t1 | MTR_1g013760 | 46.643 | 283 | 127 | 7 | 41 | 314 | 9 | 276 | 5.70e-71 | 222 |
MS.gene83604.t1 | MTR_3g106060 | 46.545 | 275 | 114 | 7 | 56 | 314 | 29 | 286 | 3.34e-70 | 220 |
MS.gene83604.t1 | MTR_4g007060 | 60.360 | 222 | 79 | 5 | 1 | 222 | 1 | 213 | 4.00e-68 | 213 |
MS.gene83604.t1 | MTR_1g013790 | 35.897 | 273 | 129 | 8 | 51 | 316 | 6 | 239 | 1.07e-39 | 140 |
MS.gene83604.t1 | MTR_7g110720 | 27.848 | 316 | 149 | 9 | 57 | 310 | 100 | 398 | 1.95e-29 | 117 |
MS.gene83604.t1 | MTR_7g110720 | 28.525 | 305 | 134 | 10 | 57 | 310 | 100 | 371 | 2.83e-28 | 113 |
MS.gene83604.t1 | MTR_4g132430 | 30.357 | 224 | 113 | 5 | 49 | 236 | 110 | 326 | 1.32e-27 | 112 |
MS.gene83604.t1 | MTR_2g023930 | 32.911 | 237 | 95 | 8 | 49 | 231 | 139 | 365 | 5.14e-26 | 108 |
MS.gene83604.t1 | MTR_2g045360 | 31.579 | 266 | 123 | 8 | 55 | 275 | 70 | 321 | 4.53e-24 | 102 |
MS.gene83604.t1 | MTR_3g053330 | 30.870 | 230 | 110 | 6 | 47 | 231 | 86 | 311 | 4.59e-24 | 102 |
MS.gene83604.t1 | MTR_4g094412 | 53.086 | 81 | 33 | 2 | 151 | 231 | 228 | 303 | 1.57e-23 | 100 |
MS.gene83604.t1 | MTR_4g094412 | 53.086 | 81 | 33 | 2 | 151 | 231 | 219 | 294 | 1.62e-23 | 100 |
MS.gene83604.t1 | MTR_4g107970 | 51.250 | 80 | 37 | 1 | 152 | 231 | 161 | 238 | 1.22e-22 | 98.6 |
MS.gene83604.t1 | MTR_7g009730 | 47.619 | 84 | 42 | 1 | 146 | 229 | 196 | 277 | 1.56e-22 | 98.2 |
MS.gene83604.t1 | MTR_4g107970 | 51.250 | 80 | 37 | 1 | 152 | 231 | 238 | 315 | 1.88e-22 | 98.2 |
MS.gene83604.t1 | MTR_7g109800 | 50.617 | 81 | 37 | 2 | 151 | 231 | 127 | 204 | 3.84e-22 | 94.7 |
MS.gene83604.t1 | MTR_1g086790 | 54.545 | 77 | 32 | 2 | 156 | 232 | 145 | 218 | 4.33e-22 | 95.1 |
MS.gene83604.t1 | MTR_3g104750 | 40.000 | 120 | 60 | 4 | 112 | 229 | 52 | 161 | 4.62e-22 | 91.3 |
MS.gene83604.t1 | MTR_4g132430 | 47.191 | 89 | 42 | 2 | 148 | 236 | 109 | 192 | 9.70e-22 | 94.4 |
MS.gene83604.t1 | MTR_2g033820 | 53.086 | 81 | 35 | 2 | 156 | 236 | 190 | 267 | 1.17e-21 | 94.4 |
MS.gene83604.t1 | MTR_4g094588 | 51.948 | 77 | 34 | 2 | 156 | 232 | 165 | 238 | 2.26e-21 | 93.2 |
MS.gene83604.t1 | MTR_4g049760 | 50.000 | 78 | 37 | 1 | 155 | 232 | 276 | 351 | 3.62e-21 | 94.4 |
MS.gene83604.t1 | MTR_7g079010 | 52.564 | 78 | 34 | 2 | 152 | 229 | 124 | 198 | 7.73e-21 | 89.4 |
MS.gene83604.t1 | MTR_2g088000 | 31.174 | 247 | 88 | 9 | 57 | 231 | 173 | 409 | 2.17e-20 | 92.0 |
MS.gene83604.t1 | MTR_4g007060 | 50.794 | 126 | 59 | 2 | 44 | 169 | 4 | 126 | 3.98e-20 | 86.3 |
MS.gene83604.t1 | MTR_5g094430 | 57.812 | 64 | 26 | 1 | 169 | 232 | 228 | 290 | 5.12e-20 | 90.1 |
MS.gene83604.t1 | MTR_5g094430 | 46.269 | 67 | 31 | 3 | 172 | 238 | 67 | 128 | 1.52e-11 | 65.1 |
MS.gene83604.t1 | MTR_5g094430 | 57.812 | 64 | 26 | 1 | 169 | 232 | 250 | 312 | 5.58e-20 | 90.1 |
MS.gene83604.t1 | MTR_5g094430 | 46.269 | 67 | 31 | 3 | 172 | 238 | 89 | 150 | 1.42e-11 | 65.1 |
MS.gene83604.t1 | MTR_5g094430 | 57.812 | 64 | 26 | 1 | 169 | 232 | 362 | 424 | 6.08e-20 | 90.5 |
MS.gene83604.t1 | MTR_5g094430 | 46.269 | 67 | 31 | 3 | 172 | 238 | 201 | 262 | 1.58e-11 | 65.5 |
MS.gene83604.t1 | MTR_4g049790 | 50.000 | 78 | 37 | 1 | 155 | 232 | 298 | 373 | 6.57e-20 | 90.5 |
MS.gene83604.t1 | MTR_4g013260 | 40.909 | 110 | 49 | 2 | 122 | 231 | 302 | 395 | 7.59e-20 | 90.1 |
MS.gene83604.t1 | MTR_4g013260 | 49.231 | 65 | 32 | 1 | 171 | 235 | 184 | 247 | 4.79e-16 | 79.0 |
MS.gene83604.t1 | MTR_7g100510 | 52.857 | 70 | 32 | 1 | 162 | 231 | 352 | 420 | 9.68e-20 | 89.7 |
MS.gene83604.t1 | MTR_7g100510 | 53.333 | 60 | 26 | 2 | 172 | 231 | 190 | 247 | 1.25e-14 | 74.3 |
MS.gene83604.t1 | MTR_3g056100 | 57.812 | 64 | 26 | 1 | 169 | 232 | 256 | 318 | 1.04e-19 | 89.4 |
MS.gene83604.t1 | MTR_3g056100 | 48.333 | 60 | 29 | 2 | 172 | 231 | 100 | 157 | 1.85e-11 | 65.1 |
MS.gene83604.t1 | MTR_3g056100 | 57.812 | 64 | 26 | 1 | 169 | 232 | 269 | 331 | 1.11e-19 | 89.4 |
MS.gene83604.t1 | MTR_3g056100 | 48.333 | 60 | 29 | 2 | 172 | 231 | 100 | 157 | 1.92e-11 | 65.1 |
MS.gene83604.t1 | MTR_5g042920 | 54.688 | 64 | 28 | 1 | 169 | 232 | 318 | 380 | 1.16e-19 | 89.4 |
MS.gene83604.t1 | MTR_5g042920 | 45.455 | 77 | 32 | 4 | 172 | 246 | 152 | 220 | 8.31e-13 | 68.9 |
MS.gene83604.t1 | MTR_3g056100 | 57.812 | 64 | 26 | 1 | 169 | 232 | 413 | 475 | 1.21e-19 | 89.7 |
MS.gene83604.t1 | MTR_3g056100 | 48.333 | 60 | 29 | 2 | 172 | 231 | 244 | 301 | 1.99e-11 | 65.1 |
MS.gene83604.t1 | MTR_3g056100 | 57.812 | 64 | 26 | 1 | 169 | 232 | 400 | 462 | 1.25e-19 | 89.7 |
MS.gene83604.t1 | MTR_3g056100 | 48.333 | 60 | 29 | 2 | 172 | 231 | 244 | 301 | 2.06e-11 | 65.1 |
MS.gene83604.t1 | MTR_4g082580 | 42.056 | 107 | 46 | 3 | 137 | 243 | 259 | 349 | 1.37e-19 | 88.6 |
MS.gene83604.t1 | MTR_4g082580 | 48.529 | 68 | 34 | 1 | 172 | 239 | 146 | 212 | 4.68e-13 | 69.7 |
MS.gene83604.t1 | MTR_5g091390 | 50.649 | 77 | 35 | 2 | 156 | 232 | 144 | 217 | 1.49e-19 | 87.8 |
MS.gene83604.t1 | MTR_7g080000 | 42.478 | 113 | 61 | 3 | 121 | 232 | 383 | 492 | 4.00e-19 | 88.2 |
MS.gene83604.t1 | MTR_1g015140 | 50.667 | 75 | 34 | 2 | 156 | 230 | 89 | 160 | 4.89e-19 | 82.8 |
MS.gene83604.t1 | MTR_3g009470 | 41.667 | 96 | 40 | 2 | 137 | 232 | 476 | 555 | 7.13e-19 | 87.8 |
MS.gene83604.t1 | MTR_3g009470 | 34.783 | 115 | 47 | 4 | 171 | 285 | 280 | 366 | 2.65e-12 | 67.8 |
MS.gene83604.t1 | MTR_7g011820 | 56.667 | 60 | 25 | 1 | 169 | 228 | 408 | 466 | 8.13e-19 | 87.0 |
MS.gene83604.t1 | MTR_7g011820 | 43.373 | 83 | 43 | 3 | 172 | 252 | 229 | 309 | 2.18e-11 | 64.7 |
MS.gene83604.t1 | MTR_5g074400 | 40.741 | 108 | 48 | 3 | 125 | 232 | 389 | 480 | 9.36e-19 | 87.0 |
MS.gene83604.t1 | MTR_5g074400 | 50.794 | 63 | 29 | 2 | 172 | 234 | 244 | 304 | 5.40e-14 | 72.8 |
MS.gene83604.t1 | MTR_5g016610 | 40.385 | 104 | 55 | 2 | 125 | 228 | 160 | 256 | 1.07e-18 | 84.7 |
MS.gene83604.t1 | MTR_7g071120 | 38.318 | 107 | 50 | 2 | 126 | 232 | 294 | 384 | 1.15e-18 | 86.7 |
MS.gene83604.t1 | MTR_7g071120 | 45.714 | 70 | 36 | 2 | 171 | 240 | 166 | 233 | 3.15e-14 | 73.6 |
MS.gene83604.t1 | MTR_5g043880 | 50.685 | 73 | 33 | 2 | 156 | 228 | 111 | 180 | 1.39e-18 | 84.3 |
MS.gene83604.t1 | MTR_8g092140 | 49.315 | 73 | 35 | 2 | 156 | 228 | 146 | 216 | 1.41e-18 | 83.6 |
MS.gene83604.t1 | MTR_7g028415 | 38.095 | 126 | 64 | 3 | 115 | 229 | 28 | 150 | 1.97e-18 | 81.6 |
MS.gene83604.t1 | MTR_7g028710 | 38.095 | 126 | 64 | 3 | 115 | 229 | 28 | 150 | 1.97e-18 | 81.6 |
MS.gene83604.t1 | MTR_7g080020 | 44.545 | 110 | 54 | 4 | 126 | 232 | 448 | 553 | 2.01e-18 | 86.3 |
MS.gene83604.t1 | MTR_7g080020 | 49.231 | 65 | 29 | 3 | 171 | 233 | 280 | 342 | 1.42e-11 | 65.9 |
MS.gene83604.t1 | MTR_8g096730 | 44.872 | 78 | 42 | 1 | 169 | 246 | 68 | 144 | 3.42e-18 | 80.1 |
MS.gene83604.t1 | MTR_4g122530 | 49.351 | 77 | 36 | 2 | 155 | 231 | 194 | 267 | 5.58e-18 | 84.3 |
MS.gene83604.t1 | MTR_1g077780 | 50.000 | 64 | 31 | 1 | 169 | 232 | 60 | 122 | 5.65e-18 | 79.7 |
MS.gene83604.t1 | MTR_1g009613 | 44.048 | 84 | 43 | 1 | 149 | 228 | 236 | 319 | 5.69e-18 | 83.6 |
MS.gene83604.t1 | MTR_3g031220 | 39.091 | 110 | 51 | 3 | 123 | 232 | 332 | 425 | 6.79e-18 | 84.3 |
MS.gene83604.t1 | MTR_3g031220 | 50.000 | 60 | 28 | 2 | 172 | 231 | 199 | 256 | 6.29e-14 | 72.4 |
MS.gene83604.t1 | MTR_4g094908 | 56.140 | 57 | 25 | 0 | 172 | 228 | 267 | 323 | 1.28e-17 | 82.4 |
MS.gene83604.t1 | MTR_3g095040 | 30.570 | 193 | 110 | 6 | 88 | 273 | 30 | 205 | 1.47e-17 | 80.1 |
MS.gene83604.t1 | MTR_5g097490 | 50.000 | 78 | 36 | 2 | 155 | 232 | 238 | 312 | 1.52e-17 | 82.8 |
MS.gene83604.t1 | MTR_3g095080 | 47.945 | 73 | 35 | 2 | 156 | 228 | 131 | 200 | 2.69e-17 | 79.7 |
MS.gene83604.t1 | MTR_3g095080 | 47.945 | 73 | 35 | 2 | 156 | 228 | 155 | 224 | 2.99e-17 | 80.1 |
MS.gene83604.t1 | MTR_8g092010 | 47.368 | 76 | 37 | 2 | 156 | 231 | 95 | 167 | 8.39e-17 | 77.4 |
MS.gene83604.t1 | MTR_2g032030 | 43.038 | 79 | 45 | 0 | 168 | 246 | 264 | 342 | 1.03e-16 | 80.9 |
MS.gene83604.t1 | MTR_2g032030 | 42.857 | 77 | 44 | 0 | 168 | 244 | 264 | 340 | 1.08e-16 | 80.5 |
MS.gene83604.t1 | MTR_8g007270 | 39.130 | 115 | 60 | 4 | 115 | 228 | 105 | 210 | 1.12e-16 | 78.2 |
MS.gene83604.t1 | MTR_1g070455 | 51.667 | 60 | 29 | 0 | 169 | 228 | 291 | 350 | 1.55e-16 | 79.7 |
MS.gene83604.t1 | MTR_7g109600 | 35.238 | 105 | 65 | 1 | 135 | 239 | 20 | 121 | 1.86e-16 | 78.2 |
MS.gene83604.t1 | MTR_7g062220 | 45.333 | 75 | 30 | 2 | 172 | 236 | 125 | 198 | 6.07e-16 | 77.4 |
MS.gene83604.t1 | MTR_4g127040 | 45.570 | 79 | 42 | 1 | 151 | 228 | 224 | 302 | 6.68e-16 | 77.4 |
MS.gene83604.t1 | MTR_8g098945 | 46.774 | 62 | 33 | 0 | 172 | 233 | 130 | 191 | 1.45e-15 | 75.9 |
MS.gene83604.t1 | MTR_8g028565 | 37.895 | 95 | 53 | 2 | 172 | 266 | 156 | 244 | 1.63e-15 | 76.6 |
MS.gene83604.t1 | MTR_8g087000 | 35.870 | 92 | 59 | 0 | 140 | 231 | 45 | 136 | 6.26e-15 | 73.6 |
MS.gene83604.t1 | MTR_3g108960 | 31.818 | 110 | 58 | 2 | 124 | 228 | 274 | 371 | 7.09e-15 | 75.1 |
MS.gene83604.t1 | MTR_4g130900 | 43.836 | 73 | 40 | 1 | 159 | 231 | 347 | 418 | 9.47e-15 | 75.1 |
MS.gene83604.t1 | MTR_7g079040 | 43.077 | 65 | 37 | 0 | 169 | 233 | 152 | 216 | 1.17e-14 | 73.9 |
MS.gene83604.t1 | MTR_0117s0040 | 43.939 | 66 | 37 | 0 | 163 | 228 | 66 | 131 | 1.37e-14 | 72.4 |
MS.gene83604.t1 | MTR_8g087000 | 46.667 | 60 | 32 | 0 | 172 | 231 | 78 | 137 | 1.43e-14 | 72.4 |
MS.gene83604.t1 | MTR_4g047580 | 38.462 | 78 | 46 | 1 | 155 | 232 | 267 | 342 | 1.88e-14 | 74.3 |
MS.gene83604.t1 | MTR_3g031220 | 50.000 | 60 | 28 | 2 | 172 | 231 | 199 | 256 | 3.84e-14 | 72.8 |
MS.gene83604.t1 | MTR_2g016770 | 45.000 | 60 | 33 | 0 | 172 | 231 | 36 | 95 | 5.41e-14 | 70.5 |
MS.gene83604.t1 | MTR_2g016770 | 45.000 | 60 | 33 | 0 | 172 | 231 | 28 | 87 | 6.55e-14 | 70.1 |
MS.gene83604.t1 | MTR_2g024350 | 45.161 | 62 | 34 | 0 | 171 | 232 | 8 | 69 | 7.97e-14 | 70.1 |
MS.gene83604.t1 | MTR_5g074200 | 39.394 | 99 | 52 | 4 | 172 | 269 | 221 | 312 | 9.56e-14 | 71.2 |
MS.gene83604.t1 | MTR_1g078260 | 44.595 | 74 | 37 | 3 | 156 | 228 | 234 | 304 | 1.39e-13 | 71.6 |
MS.gene83604.t1 | MTR_2g083870 | 36.364 | 110 | 66 | 2 | 125 | 231 | 32 | 140 | 1.44e-13 | 69.7 |
MS.gene83604.t1 | MTR_2g024380 | 46.774 | 62 | 33 | 0 | 171 | 232 | 251 | 312 | 1.67e-13 | 71.2 |
MS.gene83604.t1 | MTR_6g086555 | 39.506 | 81 | 45 | 3 | 156 | 235 | 193 | 270 | 2.36e-13 | 70.5 |
MS.gene83604.t1 | MTR_1g099600 | 43.548 | 62 | 35 | 0 | 172 | 233 | 186 | 247 | 7.16e-13 | 68.6 |
MS.gene83604.t1 | MTR_3g009470 | 34.783 | 115 | 47 | 4 | 171 | 285 | 280 | 366 | 1.93e-12 | 68.2 |
MS.gene83604.t1 | MTR_5g097500 | 38.667 | 75 | 45 | 1 | 158 | 232 | 217 | 290 | 2.88e-12 | 66.6 |
MS.gene83604.t1 | MTR_2g075610 | 42.029 | 69 | 38 | 1 | 161 | 227 | 19 | 87 | 3.97e-12 | 64.3 |
MS.gene83604.t1 | MTR_8g067650 | 44.444 | 72 | 35 | 1 | 169 | 240 | 337 | 403 | 8.68e-12 | 66.2 |
MS.gene83604.t1 | MTR_8g067635 | 44.444 | 72 | 35 | 1 | 169 | 240 | 347 | 413 | 9.60e-12 | 65.9 |
MS.gene83604.t1 | MTR_8g099350 | 47.059 | 68 | 32 | 2 | 163 | 226 | 122 | 189 | 9.76e-12 | 65.5 |
MS.gene83604.t1 | MTR_2g075750 | 41.176 | 68 | 38 | 1 | 161 | 226 | 18 | 85 | 1.06e-11 | 63.2 |
MS.gene83604.t1 | MTR_5g067680 | 32.479 | 117 | 69 | 4 | 120 | 226 | 143 | 259 | 4.56e-11 | 63.5 |
MS.gene83604.t1 | MTR_8g069935 | 42.623 | 61 | 35 | 0 | 171 | 231 | 331 | 391 | 5.73e-11 | 63.5 |
MS.gene83604.t1 | MTR_6g053200 | 42.188 | 64 | 37 | 0 | 169 | 232 | 328 | 391 | 8.35e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83604.t1 | AT1G80840 | 53.474 | 331 | 107 | 12 | 1 | 317 | 1 | 298 | 1.33e-98 | 293 |
MS.gene83604.t1 | AT4G31800 | 44.282 | 341 | 131 | 10 | 1 | 316 | 1 | 307 | 1.29e-78 | 242 |
MS.gene83604.t1 | AT4G31800 | 46.947 | 262 | 100 | 7 | 74 | 316 | 1 | 242 | 1.07e-67 | 212 |
MS.gene83604.t1 | AT2G25000 | 45.660 | 265 | 94 | 8 | 57 | 314 | 2 | 223 | 2.03e-63 | 200 |
MS.gene83604.t1 | AT2G25000 | 45.660 | 265 | 94 | 8 | 57 | 314 | 2 | 223 | 2.03e-63 | 200 |
MS.gene83604.t1 | AT2G25000 | 44.765 | 277 | 99 | 8 | 49 | 316 | 37 | 268 | 2.47e-63 | 202 |
MS.gene83604.t1 | AT2G25000 | 43.986 | 291 | 106 | 9 | 33 | 314 | 3 | 245 | 9.53e-63 | 199 |
MS.gene83604.t1 | AT4G31800 | 45.494 | 233 | 82 | 8 | 1 | 208 | 1 | 213 | 1.56e-49 | 165 |
MS.gene83604.t1 | AT5G41570 | 48.936 | 94 | 44 | 3 | 136 | 229 | 66 | 155 | 2.85e-23 | 94.7 |
MS.gene83604.t1 | AT4G01720 | 25.143 | 350 | 152 | 9 | 60 | 310 | 105 | 443 | 4.92e-23 | 99.4 |
MS.gene83604.t1 | AT4G18170 | 47.525 | 101 | 49 | 3 | 133 | 232 | 135 | 232 | 6.86e-23 | 97.1 |
MS.gene83604.t1 | AT4G04450 | 39.252 | 107 | 56 | 1 | 125 | 231 | 161 | 258 | 8.61e-23 | 98.2 |
MS.gene83604.t1 | AT1G64000 | 52.632 | 76 | 33 | 2 | 154 | 229 | 99 | 171 | 8.97e-23 | 94.0 |
MS.gene83604.t1 | AT1G68150 | 51.852 | 81 | 34 | 2 | 151 | 231 | 220 | 295 | 1.30e-22 | 97.1 |
MS.gene83604.t1 | AT4G22070 | 50.000 | 84 | 37 | 2 | 148 | 231 | 279 | 357 | 1.56e-22 | 98.2 |
MS.gene83604.t1 | AT4G22070 | 50.000 | 84 | 37 | 2 | 148 | 231 | 279 | 357 | 1.56e-22 | 98.2 |
MS.gene83604.t1 | AT4G22070 | 50.000 | 84 | 37 | 2 | 148 | 231 | 279 | 357 | 1.56e-22 | 98.2 |
MS.gene83604.t1 | AT4G22070 | 50.000 | 84 | 37 | 2 | 148 | 231 | 279 | 357 | 1.56e-22 | 98.2 |
MS.gene83604.t1 | AT4G04450 | 39.252 | 107 | 56 | 1 | 125 | 231 | 255 | 352 | 2.71e-22 | 97.4 |
MS.gene83604.t1 | AT1G29860 | 52.439 | 82 | 36 | 2 | 156 | 237 | 123 | 201 | 2.83e-22 | 94.7 |
MS.gene83604.t1 | AT1G62300 | 50.000 | 84 | 37 | 2 | 148 | 231 | 294 | 372 | 4.07e-22 | 97.1 |
MS.gene83604.t1 | AT5G15130 | 38.793 | 116 | 55 | 3 | 121 | 231 | 141 | 245 | 1.03e-21 | 95.9 |
MS.gene83604.t1 | AT5G15130 | 38.793 | 116 | 55 | 3 | 121 | 231 | 183 | 287 | 1.22e-21 | 95.5 |
MS.gene83604.t1 | AT1G18860 | 58.065 | 62 | 26 | 0 | 170 | 231 | 238 | 299 | 1.78e-21 | 95.1 |
MS.gene83604.t1 | AT5G07100 | 33.987 | 153 | 80 | 4 | 85 | 232 | 65 | 201 | 3.23e-21 | 90.5 |
MS.gene83604.t1 | AT5G07100 | 45.455 | 77 | 41 | 1 | 159 | 235 | 12 | 87 | 3.50e-16 | 76.6 |
MS.gene83604.t1 | AT5G07100 | 33.987 | 153 | 80 | 4 | 85 | 232 | 65 | 201 | 3.23e-21 | 90.5 |
MS.gene83604.t1 | AT5G07100 | 45.455 | 77 | 41 | 1 | 159 | 235 | 12 | 87 | 3.50e-16 | 76.6 |
MS.gene83604.t1 | AT5G07100 | 33.987 | 153 | 80 | 4 | 85 | 232 | 65 | 201 | 3.23e-21 | 90.5 |
MS.gene83604.t1 | AT5G07100 | 45.455 | 77 | 41 | 1 | 159 | 235 | 12 | 87 | 3.50e-16 | 76.6 |
MS.gene83604.t1 | AT5G07100 | 33.987 | 153 | 80 | 4 | 85 | 232 | 65 | 201 | 3.23e-21 | 90.5 |
MS.gene83604.t1 | AT5G07100 | 45.455 | 77 | 41 | 1 | 159 | 235 | 12 | 87 | 3.50e-16 | 76.6 |
MS.gene83604.t1 | AT2G47260 | 50.000 | 86 | 40 | 2 | 151 | 236 | 156 | 238 | 5.05e-21 | 92.0 |
MS.gene83604.t1 | AT5G49520 | 51.948 | 77 | 34 | 2 | 155 | 231 | 207 | 280 | 5.97e-21 | 92.8 |
MS.gene83604.t1 | AT5G07100 | 33.987 | 153 | 80 | 4 | 85 | 232 | 158 | 294 | 7.85e-21 | 91.3 |
MS.gene83604.t1 | AT5G07100 | 45.455 | 77 | 41 | 1 | 159 | 235 | 105 | 180 | 1.20e-15 | 76.6 |
MS.gene83604.t1 | AT3G62340 | 53.086 | 81 | 35 | 2 | 151 | 231 | 100 | 177 | 9.86e-21 | 90.5 |
MS.gene83604.t1 | AT2G21900 | 44.554 | 101 | 48 | 3 | 133 | 232 | 76 | 169 | 1.37e-20 | 88.2 |
MS.gene83604.t1 | AT4G26640 | 32.512 | 203 | 119 | 6 | 113 | 310 | 144 | 333 | 1.42e-20 | 91.7 |
MS.gene83604.t1 | AT4G26640 | 43.662 | 71 | 38 | 2 | 161 | 231 | 25 | 93 | 3.30e-12 | 67.0 |
MS.gene83604.t1 | AT4G26640 | 32.512 | 203 | 119 | 6 | 113 | 310 | 144 | 333 | 1.42e-20 | 91.7 |
MS.gene83604.t1 | AT4G26640 | 43.662 | 71 | 38 | 2 | 161 | 231 | 25 | 93 | 3.30e-12 | 67.0 |
MS.gene83604.t1 | AT4G26640 | 32.512 | 203 | 119 | 6 | 113 | 310 | 144 | 333 | 1.42e-20 | 91.7 |
MS.gene83604.t1 | AT4G26640 | 43.662 | 71 | 38 | 2 | 161 | 231 | 25 | 93 | 3.30e-12 | 67.0 |
MS.gene83604.t1 | AT4G26640 | 32.512 | 203 | 119 | 6 | 113 | 310 | 144 | 333 | 1.42e-20 | 91.7 |
MS.gene83604.t1 | AT4G26640 | 43.662 | 71 | 38 | 2 | 161 | 231 | 25 | 93 | 3.30e-12 | 67.0 |
MS.gene83604.t1 | AT5G26170 | 53.425 | 73 | 31 | 2 | 156 | 228 | 100 | 169 | 2.10e-20 | 87.0 |
MS.gene83604.t1 | AT1G13960 | 34.694 | 147 | 68 | 3 | 101 | 247 | 366 | 484 | 2.28e-20 | 91.7 |
MS.gene83604.t1 | AT1G13960 | 50.746 | 67 | 31 | 2 | 172 | 238 | 230 | 294 | 2.56e-13 | 70.9 |
MS.gene83604.t1 | AT4G26640 | 32.512 | 203 | 119 | 6 | 113 | 310 | 248 | 437 | 3.93e-20 | 90.9 |
MS.gene83604.t1 | AT4G26640 | 43.662 | 71 | 38 | 2 | 161 | 231 | 129 | 197 | 3.72e-12 | 67.0 |
MS.gene83604.t1 | AT1G13960 | 34.694 | 147 | 68 | 3 | 101 | 247 | 213 | 331 | 4.20e-20 | 90.1 |
MS.gene83604.t1 | AT1G13960 | 50.746 | 67 | 31 | 2 | 172 | 238 | 77 | 141 | 2.91e-13 | 70.1 |
MS.gene83604.t1 | AT1G69310 | 50.000 | 78 | 36 | 2 | 151 | 228 | 129 | 203 | 5.38e-20 | 88.6 |
MS.gene83604.t1 | AT1G69310 | 50.000 | 78 | 36 | 2 | 151 | 228 | 129 | 203 | 5.38e-20 | 88.6 |
MS.gene83604.t1 | AT1G69310 | 50.000 | 78 | 36 | 2 | 151 | 228 | 129 | 203 | 5.38e-20 | 88.6 |
MS.gene83604.t1 | AT4G26640 | 36.429 | 140 | 81 | 3 | 113 | 247 | 280 | 416 | 5.62e-20 | 90.5 |
MS.gene83604.t1 | AT4G26640 | 43.662 | 71 | 38 | 2 | 161 | 231 | 161 | 229 | 3.85e-12 | 67.4 |
MS.gene83604.t1 | AT4G26640 | 36.429 | 140 | 81 | 3 | 113 | 247 | 320 | 456 | 6.21e-20 | 90.5 |
MS.gene83604.t1 | AT4G26640 | 43.662 | 71 | 38 | 2 | 161 | 231 | 201 | 269 | 3.84e-12 | 67.4 |
MS.gene83604.t1 | AT5G46350 | 40.476 | 126 | 54 | 6 | 156 | 280 | 170 | 275 | 8.06e-20 | 88.6 |
MS.gene83604.t1 | AT5G56270 | 44.000 | 100 | 40 | 3 | 133 | 232 | 464 | 547 | 8.67e-20 | 90.5 |
MS.gene83604.t1 | AT5G56270 | 44.737 | 76 | 36 | 3 | 170 | 245 | 272 | 341 | 1.64e-12 | 68.6 |
MS.gene83604.t1 | AT2G03340 | 56.250 | 64 | 27 | 1 | 169 | 232 | 413 | 475 | 9.77e-20 | 90.1 |
MS.gene83604.t1 | AT2G03340 | 47.222 | 72 | 36 | 2 | 172 | 243 | 251 | 320 | 4.51e-14 | 73.2 |
MS.gene83604.t1 | AT5G13080 | 50.000 | 80 | 37 | 2 | 156 | 235 | 54 | 130 | 1.86e-19 | 83.6 |
MS.gene83604.t1 | AT1G55600 | 50.000 | 80 | 37 | 2 | 152 | 231 | 290 | 366 | 2.45e-19 | 88.6 |
MS.gene83604.t1 | AT1G69810 | 29.365 | 252 | 113 | 8 | 43 | 231 | 15 | 264 | 1.16e-18 | 86.3 |
MS.gene83604.t1 | AT3G01080 | 56.667 | 60 | 25 | 1 | 169 | 228 | 342 | 400 | 1.21e-18 | 86.7 |
MS.gene83604.t1 | AT3G01080 | 56.667 | 60 | 25 | 1 | 169 | 228 | 304 | 362 | 1.36e-18 | 86.3 |
MS.gene83604.t1 | AT2G30250 | 48.276 | 87 | 42 | 2 | 146 | 232 | 305 | 388 | 3.53e-18 | 84.7 |
MS.gene83604.t1 | AT2G30250 | 35.577 | 104 | 52 | 4 | 172 | 262 | 167 | 268 | 1.53e-12 | 68.2 |
MS.gene83604.t1 | AT5G64810 | 37.931 | 116 | 67 | 3 | 113 | 228 | 56 | 166 | 4.14e-18 | 81.3 |
MS.gene83604.t1 | AT3G01970 | 51.351 | 74 | 33 | 2 | 155 | 228 | 51 | 121 | 6.58e-18 | 79.3 |
MS.gene83604.t1 | AT1G69810 | 48.750 | 80 | 38 | 2 | 153 | 231 | 129 | 206 | 8.36e-18 | 83.2 |
MS.gene83604.t1 | AT5G52830 | 42.045 | 88 | 51 | 0 | 172 | 259 | 166 | 253 | 8.42e-18 | 83.2 |
MS.gene83604.t1 | AT2G23320 | 39.683 | 126 | 62 | 4 | 103 | 228 | 186 | 297 | 1.16e-17 | 82.4 |
MS.gene83604.t1 | AT4G39410 | 45.783 | 83 | 42 | 2 | 146 | 228 | 200 | 279 | 1.44e-17 | 82.0 |
MS.gene83604.t1 | AT2G46130 | 48.101 | 79 | 38 | 2 | 151 | 229 | 12 | 87 | 1.54e-17 | 77.4 |
MS.gene83604.t1 | AT2G04880 | 50.704 | 71 | 34 | 1 | 169 | 239 | 305 | 374 | 1.81e-17 | 83.2 |
MS.gene83604.t1 | AT2G04880 | 40.244 | 82 | 46 | 3 | 169 | 249 | 109 | 188 | 1.44e-12 | 68.6 |
MS.gene83604.t1 | AT2G04880 | 50.704 | 71 | 34 | 1 | 169 | 239 | 281 | 350 | 1.99e-17 | 82.8 |
MS.gene83604.t1 | AT2G04880 | 40.244 | 82 | 46 | 3 | 169 | 249 | 109 | 188 | 1.56e-12 | 68.2 |
MS.gene83604.t1 | AT2G38470 | 53.125 | 64 | 29 | 1 | 169 | 232 | 360 | 422 | 3.04e-17 | 82.4 |
MS.gene83604.t1 | AT2G38470 | 39.806 | 103 | 54 | 3 | 171 | 273 | 184 | 278 | 2.01e-14 | 73.9 |
MS.gene83604.t1 | AT2G30590 | 50.746 | 67 | 32 | 1 | 169 | 234 | 311 | 377 | 4.31e-17 | 81.6 |
MS.gene83604.t1 | AT4G26440 | 54.688 | 64 | 28 | 1 | 169 | 232 | 370 | 432 | 4.35e-17 | 82.0 |
MS.gene83604.t1 | AT4G26440 | 44.928 | 69 | 32 | 3 | 172 | 240 | 179 | 241 | 1.88e-11 | 65.1 |
MS.gene83604.t1 | AT4G31550 | 51.667 | 60 | 29 | 0 | 169 | 228 | 244 | 303 | 4.97e-17 | 80.9 |
MS.gene83604.t1 | AT4G31550 | 51.667 | 60 | 29 | 0 | 169 | 228 | 243 | 302 | 5.02e-17 | 80.9 |
MS.gene83604.t1 | AT2G44745 | 38.655 | 119 | 68 | 4 | 120 | 236 | 95 | 210 | 5.52e-17 | 79.0 |
MS.gene83604.t1 | AT1G29280 | 50.000 | 60 | 30 | 0 | 172 | 231 | 75 | 134 | 6.75e-17 | 79.3 |
MS.gene83604.t1 | AT5G43290 | 42.857 | 84 | 46 | 2 | 145 | 228 | 89 | 170 | 7.27e-17 | 79.7 |
MS.gene83604.t1 | AT2G34830 | 35.043 | 117 | 70 | 1 | 123 | 233 | 161 | 277 | 8.16e-17 | 80.9 |
MS.gene83604.t1 | AT2G34830 | 35.043 | 117 | 70 | 1 | 123 | 233 | 170 | 286 | 1.03e-16 | 80.9 |
MS.gene83604.t1 | AT3G04670 | 51.667 | 60 | 29 | 0 | 169 | 228 | 260 | 319 | 2.96e-16 | 78.6 |
MS.gene83604.t1 | AT4G24240 | 44.304 | 79 | 43 | 1 | 151 | 228 | 260 | 338 | 4.27e-16 | 78.2 |
MS.gene83604.t1 | AT2G37260 | 37.500 | 120 | 64 | 3 | 113 | 228 | 213 | 325 | 4.97e-16 | 78.2 |
MS.gene83604.t1 | AT2G37260 | 48.000 | 75 | 37 | 2 | 158 | 232 | 72 | 144 | 3.88e-14 | 72.4 |
MS.gene83604.t1 | AT1G69310 | 48.718 | 78 | 33 | 3 | 151 | 228 | 129 | 199 | 5.09e-16 | 77.4 |
MS.gene83604.t1 | AT2G37260 | 37.500 | 120 | 64 | 3 | 113 | 228 | 211 | 323 | 5.18e-16 | 78.2 |
MS.gene83604.t1 | AT2G37260 | 48.000 | 75 | 37 | 2 | 158 | 232 | 70 | 142 | 4.09e-14 | 72.4 |
MS.gene83604.t1 | AT2G37260 | 37.037 | 135 | 69 | 4 | 113 | 238 | 293 | 420 | 8.00e-16 | 78.2 |
MS.gene83604.t1 | AT2G37260 | 48.000 | 75 | 37 | 2 | 158 | 232 | 152 | 224 | 4.60e-14 | 72.8 |
MS.gene83604.t1 | AT5G28650 | 51.667 | 60 | 29 | 0 | 169 | 228 | 260 | 319 | 8.02e-16 | 77.4 |
MS.gene83604.t1 | AT1G30650 | 45.714 | 70 | 38 | 0 | 164 | 233 | 210 | 279 | 8.18e-16 | 78.2 |
MS.gene83604.t1 | AT2G24570 | 50.000 | 60 | 30 | 0 | 169 | 228 | 241 | 300 | 1.38e-15 | 76.6 |
MS.gene83604.t1 | AT5G45050 | 37.500 | 120 | 66 | 2 | 172 | 282 | 1153 | 1272 | 1.42e-15 | 78.2 |
MS.gene83604.t1 | AT5G45050 | 37.500 | 120 | 66 | 2 | 172 | 282 | 1181 | 1300 | 1.46e-15 | 78.2 |
MS.gene83604.t1 | AT5G45050 | 37.500 | 120 | 66 | 2 | 172 | 282 | 1042 | 1161 | 1.57e-15 | 77.8 |
MS.gene83604.t1 | AT3G58710 | 40.323 | 124 | 64 | 3 | 129 | 245 | 24 | 144 | 2.10e-15 | 75.5 |
MS.gene83604.t1 | AT4G01250 | 38.824 | 85 | 52 | 0 | 172 | 256 | 129 | 213 | 2.43e-15 | 75.5 |
MS.gene83604.t1 | AT3G58710 | 40.000 | 125 | 64 | 3 | 129 | 245 | 24 | 145 | 2.93e-15 | 75.1 |
MS.gene83604.t1 | AT4G23550 | 32.192 | 146 | 87 | 4 | 169 | 314 | 138 | 271 | 4.07e-15 | 75.1 |
MS.gene83604.t1 | AT4G30935 | 42.466 | 73 | 41 | 1 | 159 | 231 | 319 | 390 | 4.99e-15 | 75.9 |
MS.gene83604.t1 | AT2G46130 | 46.835 | 79 | 35 | 3 | 151 | 229 | 12 | 83 | 1.20e-13 | 66.6 |
MS.gene83604.t1 | AT2G46400 | 41.096 | 73 | 39 | 2 | 156 | 226 | 91 | 161 | 9.54e-12 | 65.1 |
MS.gene83604.t1 | AT5G45260 | 37.975 | 79 | 47 | 1 | 172 | 248 | 1209 | 1287 | 1.37e-11 | 65.9 |
MS.gene83604.t1 | AT3G01080 | 40.000 | 75 | 43 | 2 | 172 | 246 | 206 | 278 | 7.95e-11 | 62.4 |
Find 59 sgRNAs with CRISPR-Local
Find 77 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATCTGTGGTACTTCCATTT+TGG | 0.140306 | 2.2:-1475237 | None:intergenic |
TCATACTTCTTGAAGTTTAC+AGG | 0.231811 | 2.2:-1474253 | None:intergenic |
AATGGAAGTACCACAGATTT+TGG | 0.248540 | 2.2:+1475241 | MS.gene83604:CDS |
GCACTTGCTGCTGCCATATC+AGG | 0.283466 | 2.2:+1475311 | MS.gene83604:CDS |
AATCTAATGGGAGGAGTAAC+TGG | 0.300205 | 2.2:+1474649 | MS.gene83604:CDS |
GGATATCAGTGGAGAAAATA+TGG | 0.332364 | 2.2:+1474918 | MS.gene83604:CDS |
GATGATAAATAATCCCAAAA+TGG | 0.343074 | 2.2:+1475223 | MS.gene83604:CDS |
TTTATCATCATATTCTTAGA+AGG | 0.347068 | 2.2:-1475209 | None:intergenic |
AATAGTAGAAACTTGCATTA+AGG | 0.347618 | 2.2:+1474729 | MS.gene83604:CDS |
CAAGTACAGTTACACTTGAT+TGG | 0.350481 | 2.2:+1475162 | MS.gene83604:CDS |
AAGCAGCAGTAACAATCTAA+TGG | 0.359770 | 2.2:+1474636 | MS.gene83604:CDS |
AAGGTACTACTGGACTAATT+TGG | 0.361772 | 2.2:-1475130 | None:intergenic |
TTCTTCTTCACTGTGCAGCT+TGG | 0.402986 | 2.2:-1474999 | None:intergenic |
AGCATTTGAAGTATGCTCTT+GGG | 0.421783 | 2.2:-1474968 | None:intergenic |
TTCCTACAACGATTGTTTGT+CGG | 0.422479 | 2.2:-1475107 | None:intergenic |
CAAGTTTCTACTATTTGCCT+TGG | 0.425526 | 2.2:-1474721 | None:intergenic |
GGGCTTTGCTCCTTATGATC+AGG | 0.429712 | 2.2:-1474586 | None:intergenic |
GAGAAAGAATCCTGATCATA+AGG | 0.436763 | 2.2:+1474576 | MS.gene83604:CDS |
AGCAGCAGTAACAATCTAAT+GGG | 0.440609 | 2.2:+1474637 | MS.gene83604:CDS |
TCAGTCAAGTGGTGCCTTGG+TGG | 0.446693 | 2.2:+1474450 | MS.gene83604:intron |
GAGCATTTGAAGTATGCTCT+TGG | 0.457888 | 2.2:-1474969 | None:intergenic |
ATCATGGATTAACACTTCCT+TGG | 0.460598 | 2.2:+1474189 | MS.gene83604:CDS |
GTGGAGAAAATATGGACAAA+AGG | 0.461765 | 2.2:+1474926 | MS.gene83604:CDS |
TTGAAGTATGCTCTTGGGGA+TGG | 0.464325 | 2.2:-1474963 | None:intergenic |
TTCTTAGAAGGTTCAGAAGA+AGG | 0.464649 | 2.2:-1475197 | None:intergenic |
CAATCAAGTGTAACTGTACT+TGG | 0.475314 | 2.2:-1475161 | None:intergenic |
AGCAAAGCCCATCTCAGAAA+AGG | 0.487615 | 2.2:+1474599 | MS.gene83604:CDS |
GTCAAGTGGTGCCTTGGTGG+AGG | 0.490012 | 2.2:+1474453 | MS.gene83604:intron |
TGCTCTGAAGTTAAGATCCT+TGG | 0.493603 | 2.2:-1475288 | None:intergenic |
TGTAAACTTCAAGAAGTATG+AGG | 0.496827 | 2.2:+1474255 | MS.gene83604:CDS |
TCATCCTCATCCTTCTCAAA+CGG | 0.516116 | 2.2:+1475082 | MS.gene83604:CDS |
GCAGAAAACAAGAAGTTGAC+AGG | 0.521855 | 2.2:+1474493 | MS.gene83604:CDS |
TATGTTGCAACCACAACTGA+TGG | 0.530178 | 2.2:-1475044 | None:intergenic |
CACATTGAGAAACAATCTGA+TGG | 0.530744 | 2.2:+1474546 | MS.gene83604:CDS |
GGTGCAGAAGAAGGTACTAC+TGG | 0.531405 | 2.2:-1475140 | None:intergenic |
ACTGTACTTGGTGCAGAAGA+AGG | 0.542764 | 2.2:-1475149 | None:intergenic |
CAACATTAATCCACGCAGTA+GGG | 0.544477 | 2.2:+1474216 | MS.gene83604:CDS |
TCAACATTAATCCACGCAGT+AGG | 0.551260 | 2.2:+1474215 | MS.gene83604:CDS |
GTTGTGGTTGCAACATATGA+AGG | 0.552701 | 2.2:+1475050 | MS.gene83604:CDS |
AGCCGACAAACAATCGTTGT+AGG | 0.557166 | 2.2:+1475105 | MS.gene83604:CDS |
TATATCTTCTGCAAAAGAAG+AGG | 0.565925 | 2.2:+1474309 | MS.gene83604:CDS |
TTTGTCGGCTCCGTTTGAGA+AGG | 0.566050 | 2.2:-1475092 | None:intergenic |
TGGATTAATGTTGAGATCCA+AGG | 0.586656 | 2.2:-1474206 | None:intergenic |
GAAGAAGGTGCAAAGAAGTG+TGG | 0.601905 | 2.2:+1475016 | MS.gene83604:CDS |
ATATGGACAAAAGGTGACAA+GGG | 0.608161 | 2.2:+1474935 | MS.gene83604:CDS |
ATCAATCATGCAAGAAACCA+AGG | 0.612418 | 2.2:+1474704 | MS.gene83604:CDS |
GCATTTGAAGTATGCTCTTG+GGG | 0.616672 | 2.2:-1474967 | None:intergenic |
TACTTCTTGAAGTTTACAGG+AGG | 0.621579 | 2.2:-1474250 | None:intergenic |
AATATGGACAAAAGGTGACA+AGG | 0.623618 | 2.2:+1474934 | MS.gene83604:CDS |
ATCTGTTCCACCAAAATCTG+TGG | 0.633715 | 2.2:-1475251 | None:intergenic |
GGCTCCGTTTGAGAAGGATG+AGG | 0.643319 | 2.2:-1475086 | None:intergenic |
AAACTTCAAGAAGTATGAGG+TGG | 0.647098 | 2.2:+1474258 | MS.gene83604:CDS |
TTGTGAAAGATGGATATCAG+TGG | 0.648462 | 2.2:+1474907 | MS.gene83604:CDS |
TGTGGATGATCCATCAGTTG+TGG | 0.652865 | 2.2:+1475034 | MS.gene83604:CDS |
AGCAGTAACAATCTAATGGG+AGG | 0.658927 | 2.2:+1474640 | MS.gene83604:CDS |
AAGCTGCACAGTGAAGAAGA+AGG | 0.665099 | 2.2:+1475001 | MS.gene83604:CDS |
GATGGCTACTTCATTGACCA+AGG | 0.672567 | 2.2:+1475271 | MS.gene83604:CDS |
TGTTCATGAACCCTACTGCG+TGG | 0.674456 | 2.2:-1474226 | None:intergenic |
TCGTTTCAGCTCCTCCACCA+AGG | 0.688042 | 2.2:-1474464 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAACAATTTTTTCTCATTA+GGG | + | chr2.2:1474281-1474300 | MS.gene83604:CDS | 15.0% |
!! | TTATGAATACTAGATATATG+AGG | + | chr2.2:1474384-1474403 | MS.gene83604:intron | 20.0% |
!! | TTTATCATCATATTCTTAGA+AGG | - | chr2.2:1475212-1475231 | None:intergenic | 20.0% |
!!! | GAAAACAATTTTTTCTCATT+AGG | + | chr2.2:1474280-1474299 | MS.gene83604:CDS | 20.0% |
! | AATAGTAGAAACTTGCATTA+AGG | + | chr2.2:1474729-1474748 | MS.gene83604:CDS | 25.0% |
! | GAAGAAAAATGAATCTTACA+AGG | - | chr2.2:1474801-1474820 | None:intergenic | 25.0% |
! | GATGATAAATAATCCCAAAA+TGG | + | chr2.2:1475223-1475242 | MS.gene83604:CDS | 25.0% |
!! | TACTAGATATATGAGGTTTT+TGG | + | chr2.2:1474391-1474410 | MS.gene83604:intron | 25.0% |
!! | TATTGATATTTTCAGTCAAG+TGG | + | chr2.2:1474439-1474458 | MS.gene83604:intron | 25.0% |
!! | TATTTTCAGATTGTGAAAGA+TGG | + | chr2.2:1474897-1474916 | MS.gene83604:intron | 25.0% |
AAAGAAGAGGTAAGTTAGTT+TGG | + | chr2.2:1474322-1474341 | MS.gene83604:intron | 30.0% | |
AGTCATACAACCTAATGAAA+TGG | - | chr2.2:1474841-1474860 | None:intergenic | 30.0% | |
ATTTGCAAAGCCATTTCATT+AGG | + | chr2.2:1474828-1474847 | MS.gene83604:intron | 30.0% | |
TATATCTTCTGCAAAAGAAG+AGG | + | chr2.2:1474309-1474328 | MS.gene83604:CDS | 30.0% | |
TCATACTTCTTGAAGTTTAC+AGG | - | chr2.2:1474256-1474275 | None:intergenic | 30.0% | |
! | GTAAGTTAGTTTGGTTACTT+TGG | + | chr2.2:1474331-1474350 | MS.gene83604:intron | 30.0% |
! | GTGTAACATTTTTCCTGATA+TGG | - | chr2.2:1475327-1475346 | None:intergenic | 30.0% |
! | TGTAAACTTCAAGAAGTATG+AGG | + | chr2.2:1474255-1474274 | MS.gene83604:CDS | 30.0% |
AAGCAGCAGTAACAATCTAA+TGG | + | chr2.2:1474636-1474655 | MS.gene83604:CDS | 35.0% | |
AATATGGACAAAAGGTGACA+AGG | + | chr2.2:1474934-1474953 | MS.gene83604:CDS | 35.0% | |
AGCAGCAGTAACAATCTAAT+GGG | + | chr2.2:1474637-1474656 | MS.gene83604:CDS | 35.0% | |
ATATGGACAAAAGGTGACAA+GGG | + | chr2.2:1474935-1474954 | MS.gene83604:CDS | 35.0% | |
ATCAATCATGCAAGAAACCA+AGG | + | chr2.2:1474704-1474723 | MS.gene83604:CDS | 35.0% | |
CAAGTACAGTTACACTTGAT+TGG | + | chr2.2:1475162-1475181 | MS.gene83604:CDS | 35.0% | |
CAAGTTTCTACTATTTGCCT+TGG | - | chr2.2:1474724-1474743 | None:intergenic | 35.0% | |
CAATCAAGTGTAACTGTACT+TGG | - | chr2.2:1475164-1475183 | None:intergenic | 35.0% | |
CACATTGAGAAACAATCTGA+TGG | + | chr2.2:1474546-1474565 | MS.gene83604:CDS | 35.0% | |
GAGAAAGAATCCTGATCATA+AGG | + | chr2.2:1474576-1474595 | MS.gene83604:CDS | 35.0% | |
GGATATCAGTGGAGAAAATA+TGG | + | chr2.2:1474918-1474937 | MS.gene83604:CDS | 35.0% | |
GTGGAGAAAATATGGACAAA+AGG | + | chr2.2:1474926-1474945 | MS.gene83604:CDS | 35.0% | |
TACTTCTTGAAGTTTACAGG+AGG | - | chr2.2:1474253-1474272 | None:intergenic | 35.0% | |
TGGATTAATGTTGAGATCCA+AGG | - | chr2.2:1474209-1474228 | None:intergenic | 35.0% | |
TTCCTACAACGATTGTTTGT+CGG | - | chr2.2:1475110-1475129 | None:intergenic | 35.0% | |
TTCTTAGAAGGTTCAGAAGA+AGG | - | chr2.2:1475200-1475219 | None:intergenic | 35.0% | |
TTGTGAAAGATGGATATCAG+TGG | + | chr2.2:1474907-1474926 | MS.gene83604:CDS | 35.0% | |
! | AAACTTCAAGAAGTATGAGG+TGG | + | chr2.2:1474258-1474277 | MS.gene83604:CDS | 35.0% |
! | AAGGTACTACTGGACTAATT+TGG | - | chr2.2:1475133-1475152 | None:intergenic | 35.0% |
! | AATCTGTGGTACTTCCATTT+TGG | - | chr2.2:1475240-1475259 | None:intergenic | 35.0% |
! | AGCATTTGAAGTATGCTCTT+GGG | - | chr2.2:1474971-1474990 | None:intergenic | 35.0% |
! | ATCATGGATTAACACTTCCT+TGG | + | chr2.2:1474189-1474208 | MS.gene83604:CDS | 35.0% |
! | ATCTGTGGTACTTCCATTTT+GGG | - | chr2.2:1475239-1475258 | None:intergenic | 35.0% |
!! | TCAGATTTCCTTTTCTGAGA+TGG | - | chr2.2:1474610-1474629 | None:intergenic | 35.0% |
!!! | AATGGAAGTACCACAGATTT+TGG | + | chr2.2:1475241-1475260 | MS.gene83604:CDS | 35.0% |
!!! | CAGATTTCCTTTTCTGAGAT+GGG | - | chr2.2:1474609-1474628 | None:intergenic | 35.0% |
AATCTAATGGGAGGAGTAAC+TGG | + | chr2.2:1474649-1474668 | MS.gene83604:CDS | 40.0% | |
AGCAGTAACAATCTAATGGG+AGG | + | chr2.2:1474640-1474659 | MS.gene83604:CDS | 40.0% | |
ATCTGTTCCACCAAAATCTG+TGG | - | chr2.2:1475254-1475273 | None:intergenic | 40.0% | |
CAACATTAATCCACGCAGTA+GGG | + | chr2.2:1474216-1474235 | MS.gene83604:CDS | 40.0% | |
GCAGAAAACAAGAAGTTGAC+AGG | + | chr2.2:1474493-1474512 | MS.gene83604:CDS | 40.0% | |
GTTGTGGTTGCAACATATGA+AGG | + | chr2.2:1475050-1475069 | MS.gene83604:CDS | 40.0% | |
TATGTTGCAACCACAACTGA+TGG | - | chr2.2:1475047-1475066 | None:intergenic | 40.0% | |
TCAACATTAATCCACGCAGT+AGG | + | chr2.2:1474215-1474234 | MS.gene83604:CDS | 40.0% | |
TCATCCTCATCCTTCTCAAA+CGG | + | chr2.2:1475082-1475101 | MS.gene83604:CDS | 40.0% | |
! | GAGCATTTGAAGTATGCTCT+TGG | - | chr2.2:1474972-1474991 | None:intergenic | 40.0% |
! | GCATTTGAAGTATGCTCTTG+GGG | - | chr2.2:1474970-1474989 | None:intergenic | 40.0% |
!! | ACAGATTTTGGTGGAACAGA+TGG | + | chr2.2:1475253-1475272 | MS.gene83604:CDS | 40.0% |
!! | TGCTCTGAAGTTAAGATCCT+TGG | - | chr2.2:1475291-1475310 | None:intergenic | 40.0% |
AAGCTGCACAGTGAAGAAGA+AGG | + | chr2.2:1475001-1475020 | MS.gene83604:CDS | 45.0% | |
AGCAAAGCCCATCTCAGAAA+AGG | + | chr2.2:1474599-1474618 | MS.gene83604:CDS | 45.0% | |
AGCCGACAAACAATCGTTGT+AGG | + | chr2.2:1475105-1475124 | MS.gene83604:CDS | 45.0% | |
GATGGCTACTTCATTGACCA+AGG | + | chr2.2:1475271-1475290 | MS.gene83604:CDS | 45.0% | |
TGTGGATGATCCATCAGTTG+TGG | + | chr2.2:1475034-1475053 | MS.gene83604:CDS | 45.0% | |
TTCTTCTTCACTGTGCAGCT+TGG | - | chr2.2:1475002-1475021 | None:intergenic | 45.0% | |
TTGAAGTATGCTCTTGGGGA+TGG | - | chr2.2:1474966-1474985 | None:intergenic | 45.0% | |
! | GAAGAAGGTGCAAAGAAGTG+TGG | + | chr2.2:1475016-1475035 | MS.gene83604:CDS | 45.0% |
! | TTTTCAGTCAAGTGGTGCCT+TGG | + | chr2.2:1474447-1474466 | MS.gene83604:intron | 45.0% |
!! | ACTGTACTTGGTGCAGAAGA+AGG | - | chr2.2:1475152-1475171 | None:intergenic | 45.0% |
!!! | GGAAGTACCACAGATTTTGG+TGG | + | chr2.2:1475244-1475263 | MS.gene83604:CDS | 45.0% |
GGGCTTTGCTCCTTATGATC+AGG | - | chr2.2:1474589-1474608 | None:intergenic | 50.0% | |
TGTTCATGAACCCTACTGCG+TGG | - | chr2.2:1474229-1474248 | None:intergenic | 50.0% | |
!! | GGTGCAGAAGAAGGTACTAC+TGG | - | chr2.2:1475143-1475162 | None:intergenic | 50.0% |
!! | TTTGTCGGCTCCGTTTGAGA+AGG | - | chr2.2:1475095-1475114 | None:intergenic | 50.0% |
GGCTCCGTTTGAGAAGGATG+AGG | - | chr2.2:1475089-1475108 | None:intergenic | 55.0% | |
TCAGTCAAGTGGTGCCTTGG+TGG | + | chr2.2:1474450-1474469 | MS.gene83604:intron | 55.0% | |
TCGTTTCAGCTCCTCCACCA+AGG | - | chr2.2:1474467-1474486 | None:intergenic | 55.0% | |
! | GCACTTGCTGCTGCCATATC+AGG | + | chr2.2:1475311-1475330 | MS.gene83604:CDS | 55.0% |
GTCAAGTGGTGCCTTGGTGG+AGG | + | chr2.2:1474453-1474472 | MS.gene83604:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 1474175 | 1475355 | 1474175 | ID=MS.gene83604 |
chr2.2 | mRNA | 1474175 | 1475355 | 1474175 | ID=MS.gene83604.t1;Parent=MS.gene83604 |
chr2.2 | exon | 1474175 | 1474330 | 1474175 | ID=MS.gene83604.t1.exon1;Parent=MS.gene83604.t1 |
chr2.2 | CDS | 1474175 | 1474330 | 1474175 | ID=cds.MS.gene83604.t1;Parent=MS.gene83604.t1 |
chr2.2 | exon | 1474454 | 1474801 | 1474454 | ID=MS.gene83604.t1.exon2;Parent=MS.gene83604.t1 |
chr2.2 | CDS | 1474454 | 1474801 | 1474454 | ID=cds.MS.gene83604.t1;Parent=MS.gene83604.t1 |
chr2.2 | exon | 1474906 | 1475355 | 1474906 | ID=MS.gene83604.t1.exon3;Parent=MS.gene83604.t1 |
chr2.2 | CDS | 1474906 | 1475355 | 1474906 | ID=cds.MS.gene83604.t1;Parent=MS.gene83604.t1 |
Gene Sequence |
Protein sequence |