AlfalfaGEDB | MS.gene060446

M. sativa cultivar XinJiangDaYe / MS.gene060446

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060446.t1	RHN45038.1	98.7	77	1	0	1	77	1	77	1.10E-33	152.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060446.t1	Q8RYJ9	50.8	63	31	0	6	68	6	68	1.9e-10	67.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060446.t1	A0A396GX56	98.7	77	1	0	1	77	1	77	7.9e-34	152.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene060446	MS.gene067477	0.817423	3.32E-52	-1.69E-46
MS.gene060446	MS.gene08120	0.804683	1.92E-49	-1.69E-46
MS.gene060446	MS.gene24099	0.828082	1.10E-54	-1.69E-46
MS.gene060446	MS.gene46918	0.819687	1.02E-52	-1.69E-46
MS.gene060446	MS.gene57704	0.809289	2.04E-50	-1.69E-46
MS.gene060446	MS.gene58768	0.825572	4.36E-54	-1.69E-46
MS.gene060446	MS.gene58769	0.816538	5.25E-52	-1.69E-46
MS.gene060446	MS.gene58793	0.821324	4.29E-53	-1.69E-46
MS.gene060446	MS.gene62540	0.999297	1.90E-301	-1.69E-46
MS.gene060446	MS.gene78745	0.812608	3.89E-51	-1.69E-46
MS.gene060446	MS.gene83604	0.811099	8.29E-51	-1.69E-46
MS.gene060446	MS.gene88946	0.808467	3.05E-50	-1.69E-46
MS.gene060446	MS.gene88977	0.810589	1.07E-50	-1.69E-46
MS.gene060446	MS.gene90362	0.815984	6.98E-52	-1.69E-46
MS.gene060446	MS.gene95332	0.802923	4.46E-49	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene060446	MS.gene64310	PPI
MS.gene63281	MS.gene060446	PPI
MS.gene060446	MS.gene29459	PPI
MS.gene68345	MS.gene060446	PPI
MS.gene066863	MS.gene060446	PPI
MS.gene060446	MS.gene71207	PPI
MS.gene036930	MS.gene060446	PPI
MS.gene060446	MS.gene09934	PPI
MS.gene001246	MS.gene060446	PPI
MS.gene040127	MS.gene060446	PPI
MS.gene62258	MS.gene060446	PPI
MS.gene55545	MS.gene060446	PPI
MS.gene000724	MS.gene060446	PPI
MS.gene64311	MS.gene060446	PPI
MS.gene060446	MS.gene21696	PPI
MS.gene58906	MS.gene060446	PPI
MS.gene060446	MS.gene074045	PPI
MS.gene060446	MS.gene85596	PPI
MS.gene060446	MS.gene96922	PPI
MS.gene060446	MS.gene80013	PPI
MS.gene58860	MS.gene060446	PPI
MS.gene64313	MS.gene060446	PPI
MS.gene83068	MS.gene060446	PPI
MS.gene060446	MS.gene64314	PPI
MS.gene27516	MS.gene060446	PPI
MS.gene62689	MS.gene060446	PPI
MS.gene053319	MS.gene060446	PPI
MS.gene97948	MS.gene060446	PPI
MS.gene61009	MS.gene060446	PPI
MS.gene000738	MS.gene060446	PPI
MS.gene64307	MS.gene060446	PPI
MS.gene061261	MS.gene060446	PPI
MS.gene04917	MS.gene060446	PPI
MS.gene060446	MS.gene93087	PPI
MS.gene062239	MS.gene060446	PPI
MS.gene060446	MS.gene046988	PPI
MS.gene46886	MS.gene060446	PPI
MS.gene026530	MS.gene060446	PPI
MS.gene47195	MS.gene060446	PPI
MS.gene060446	MS.gene057293	PPI
MS.gene060446	MS.gene93763	PPI
MS.gene060446	MS.gene53650	PPI
MS.gene013748	MS.gene060446	PPI
MS.gene060446	MS.gene79028	PPI
MS.gene28338	MS.gene060446	PPI
MS.gene94551	MS.gene060446	PPI
MS.gene65954	MS.gene060446	PPI
MS.gene008225	MS.gene060446	PPI
MS.gene056383	MS.gene060446	PPI
MS.gene060446	MS.gene026940	PPI
MS.gene64324	MS.gene060446	PPI
MS.gene015470	MS.gene060446	PPI
MS.gene015658	MS.gene060446	PPI
MS.gene024717	MS.gene060446	PPI
MS.gene64308	MS.gene060446	PPI
MS.gene060446	MS.gene025797	PPI
MS.gene060446	MS.gene21931	PPI
MS.gene22553	MS.gene060446	PPI
MS.gene53662	MS.gene060446	PPI
MS.gene060446	MS.gene53659	PPI
MS.gene060446	MS.gene09960	PPI
MS.gene003880	MS.gene060446	PPI
MS.gene54637	MS.gene060446	PPI
MS.gene67281	MS.gene060446	PPI
MS.gene060446	MS.gene061768	PPI
MS.gene025777	MS.gene060446	PPI
MS.gene060446	MS.gene066862	PPI
MS.gene060446	MS.gene02545	PPI
MS.gene060446	MS.gene96913	PPI
MS.gene21155	MS.gene060446	PPI
MS.gene92775	MS.gene060446	PPI
MS.gene21932	MS.gene060446	PPI
MS.gene060446	MS.gene80012	PPI
MS.gene060446	MS.gene026618	PPI
MS.gene87673	MS.gene060446	PPI
MS.gene05284	MS.gene060446	PPI
MS.gene041795	MS.gene060446	PPI
MS.gene63000	MS.gene060446	PPI
MS.gene060446	MS.gene056461	PPI
MS.gene060446	MS.gene98972	PPI
MS.gene80011	MS.gene060446	PPI
MS.gene96914	MS.gene060446	PPI
MS.gene53648	MS.gene060446	PPI
MS.gene070168	MS.gene060446	PPI
MS.gene017446	MS.gene060446	PPI
MS.gene060446	MS.gene89216	PPI
MS.gene038456	MS.gene060446	PPI
MS.gene052672	MS.gene060446	PPI
MS.gene060446	MS.gene07422	PPI
MS.gene004899	MS.gene060446	PPI
MS.gene25186	MS.gene060446	PPI
MS.gene060446	MS.gene64316	PPI
MS.gene008831	MS.gene060446	PPI
MS.gene96913	MS.gene060446	PPI
MS.gene009021	MS.gene060446	PPI
MS.gene060446	MS.gene03228	PPI
MS.gene020515	MS.gene060446	PPI
MS.gene070167	MS.gene060446	PPI
MS.gene060446	MS.gene46237	PPI
MS.gene060446	MS.gene64317	PPI
MS.gene04915	MS.gene060446	PPI
MS.gene64327	MS.gene060446	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060446.t1	MTR_6g023460	77.305	141	31	1	1	141	3	142	2.49e-76	223
MS.gene060446.t1	MTR_4g103655	59.259	135	54	1	6	140	6	139	1.67e-51	160
MS.gene060446.t1	MTR_4g103650	58.519	135	55	1	6	140	2	135	1.02e-50	158
MS.gene060446.t1	MTR_4g103630	57.037	135	57	1	6	140	6	139	1.30e-49	155
MS.gene060446.t1	MTR_3g089070	53.571	140	64	1	1	140	1	139	1.26e-46	148
MS.gene060446.t1	MTR_3g089090	53.623	138	63	1	3	140	2	138	2.07e-46	147
MS.gene060446.t1	MTR_8g078270	48.485	132	66	2	10	140	57	187	3.70e-35	120
MS.gene060446.t1	MTR_1g046950	39.437	142	74	3	6	140	4	140	4.49e-30	106
MS.gene060446.t1	MTR_5g079340	37.778	135	83	1	6	140	4	137	1.17e-28	102
MS.gene060446.t1	MTR_3g067610	38.519	135	79	2	6	140	5	135	1.19e-28	102
MS.gene060446.t1	MTR_1g047100	37.857	140	78	3	6	140	4	139	2.15e-27	99.4
MS.gene060446.t1	MTR_8g107110	38.519	135	82	1	6	140	24	157	3.39e-27	99.8
MS.gene060446.t1	MTR_8g105230	38.346	133	80	2	6	137	36	167	6.52e-26	97.1
MS.gene060446.t1	MTR_1g032070	38.519	135	81	2	8	141	48	181	1.27e-25	96.3
MS.gene060446.t1	MTR_6g079570	38.519	135	83	0	6	140	26	160	3.49e-25	94.7
MS.gene060446.t1	MTR_7g075040	38.255	149	83	4	1	140	42	190	1.47e-24	93.6
MS.gene060446.t1	MTR_4g067270	35.971	139	85	3	5	140	4	141	1.84e-23	89.7
MS.gene060446.t1	MTR_7g087610	34.043	141	90	3	2	140	8	147	3.04e-23	89.0
MS.gene060446.t1	MTR_5g017510	35.252	139	90	0	3	141	45	183	5.60e-23	89.4
MS.gene060446.t1	MTR_5g017560	35.252	139	90	0	3	141	45	183	5.60e-23	89.4
MS.gene060446.t1	MTR_5g017550	34.532	139	90	1	3	141	45	182	1.67e-22	88.2
MS.gene060446.t1	MTR_1g076650	31.915	141	94	2	2	141	8	147	2.13e-22	87.0
MS.gene060446.t1	MTR_1g076650	46.269	67	36	0	74	140	7	73	1.19e-12	61.6
MS.gene060446.t1	MTR_8g066630	33.813	139	87	2	2	136	13	150	2.37e-22	87.0
MS.gene060446.t1	MTR_8g036075	36.111	144	82	4	6	140	49	191	2.90e-22	87.8
MS.gene060446.t1	MTR_6g025320	33.333	141	91	3	2	140	8	147	6.17e-22	85.5
MS.gene060446.t1	MTR_6g025320	41.791	67	39	0	74	140	7	73	2.65e-11	58.2
MS.gene060446.t1	MTR_1g041285	33.333	141	92	2	2	141	8	147	1.53e-21	84.7
MS.gene060446.t1	MTR_5g088320	32.624	141	92	3	2	140	8	147	2.73e-21	84.0
MS.gene060446.t1	MTR_5g088320	43.284	67	38	0	74	140	7	73	6.88e-12	59.7
MS.gene060446.t1	MTR_4g086260	35.338	133	80	3	10	140	61	189	7.94e-21	84.0
MS.gene060446.t1	MTR_1g071150	31.206	141	95	2	2	141	8	147	2.35e-20	81.6
MS.gene060446.t1	MTR_3g083470	31.159	138	83	2	5	141	92	218	8.28e-20	82.0
MS.gene060446.t1	MTR_4g115170	37.580	157	72	5	6	140	64	216	7.06e-19	79.7
MS.gene060446.t1	MTR_7g089760	36.296	135	82	3	9	140	8	141	1.43e-18	77.0
MS.gene060446.t1	MTR_4g112460	32.168	143	93	3	1	140	6	147	7.41e-18	75.5
MS.gene060446.t1	MTR_5g008705	34.091	132	77	3	14	140	2	128	1.18e-17	73.9
MS.gene060446.t1	MTR_7g074240	35.374	147	77	4	9	140	27	170	1.83e-17	74.7
MS.gene060446.t1	MTR_8g069915	28.873	142	97	3	2	140	8	148	8.44e-16	70.1
MS.gene060446.t1	MTR_1g030440	33.557	149	81	3	4	141	20	161	2.42e-15	68.9
MS.gene060446.t1	MTR_7g090450	28.276	145	99	2	1	140	68	212	1.27e-14	68.2
MS.gene060446.t1	MTR_5g027000	29.078	141	98	2	1	140	17	156	1.43e-14	67.0
MS.gene060446.t1	MTR_5g089320	29.787	141	93	3	2	140	369	505	3.24e-14	68.6
MS.gene060446.t1	MTR_3g088655	32.895	152	78	5	8	141	10	155	3.97e-14	65.9
MS.gene060446.t1	MTR_6g007613	29.496	139	96	2	3	140	26	163	7.03e-14	65.1
MS.gene060446.t1	MTR_0168s0120	32.727	110	71	3	33	140	3	111	8.73e-14	63.5
MS.gene060446.t1	MTR_6g025320	32.727	110	71	3	33	140	3	111	8.73e-14	63.5
MS.gene060446.t1	MTR_5g008695	33.333	105	67	1	38	139	8	112	2.30e-13	62.8
MS.gene060446.t1	MTR_1g026190	29.630	135	89	3	8	140	389	519	3.43e-13	65.9
MS.gene060446.t1	MTR_5g009830	29.630	135	89	3	8	140	373	503	4.74e-13	65.5
MS.gene060446.t1	MTR_7g074020	29.496	139	96	2	3	140	27	164	6.20e-13	62.8
MS.gene060446.t1	MTR_5g079470	40.580	69	39	1	4	72	8	74	9.01e-13	60.1
MS.gene060446.t1	MTR_2g098890	32.867	143	86	4	5	140	63	202	1.06e-12	62.8
MS.gene060446.t1	MTR_0028s0170	31.579	133	85	3	10	140	387	515	1.58e-12	63.9
MS.gene060446.t1	MTR_4g132070	30.827	133	86	3	10	140	400	528	5.61e-12	62.4
MS.gene060446.t1	MTR_8g099095	30.075	133	87	3	10	140	375	503	6.25e-12	62.0
MS.gene060446.t1	MTR_5g092810	30.827	133	86	3	10	140	401	529	6.87e-12	62.0
MS.gene060446.t1	MTR_7g068710	29.496	139	97	1	2	140	357	494	9.24e-12	61.6
MS.gene060446.t1	MTR_4g132040	29.787	141	93	3	2	140	396	532	9.74e-12	61.6
MS.gene060446.t1	MTR_7g115040	31.206	141	95	2	2	141	8	147	1.97e-11	58.5
MS.gene060446.t1	MTR_5g011850	27.083	144	95	3	2	141	8	145	5.79e-11	57.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060446.t1	AT1G76650	51.079	139	67	1	2	140	39	176	6.11e-42	137
MS.gene060446.t1	AT1G76650	51.079	139	67	1	2	140	39	176	6.11e-42	137
MS.gene060446.t1	AT1G76650	47.482	139	62	1	2	140	39	166	1.04e-37	126
MS.gene060446.t1	AT1G76640	47.183	142	71	2	2	140	18	158	2.58e-37	125
MS.gene060446.t1	AT3G01830	48.592	142	69	2	1	140	6	145	1.40e-35	120
MS.gene060446.t1	AT5G42380	47.482	139	70	2	4	140	47	184	4.20e-35	120
MS.gene060446.t1	AT3G50770	45.652	138	68	3	9	140	67	203	1.50e-33	117
MS.gene060446.t1	AT1G24620	42.446	139	78	2	3	140	34	171	3.09e-31	110
MS.gene060446.t1	AT5G37770	42.754	138	73	2	8	140	19	155	1.70e-30	107
MS.gene060446.t1	AT5G37770	42.754	138	73	2	8	140	19	155	1.70e-30	107
MS.gene060446.t1	AT1G66400	40.876	137	77	2	8	141	17	152	1.11e-27	100
MS.gene060446.t1	AT1G18210	36.429	140	85	2	1	140	18	153	9.78e-24	90.9
MS.gene060446.t1	AT1G18210	36.429	140	85	2	1	140	18	153	9.78e-24	90.9
MS.gene060446.t1	AT5G17470	37.778	135	78	3	10	140	6	138	7.30e-23	87.8
MS.gene060446.t1	AT5G21274	34.043	141	90	3	2	140	8	147	3.10e-22	86.3
MS.gene060446.t1	AT5G21274	41.791	67	39	0	74	140	7	73	2.69e-11	58.2
MS.gene060446.t1	AT1G73630	33.333	135	86	2	6	140	20	150	3.17e-22	86.7
MS.gene060446.t1	AT3G56800	33.333	141	91	3	2	140	8	147	5.32e-22	85.9
MS.gene060446.t1	AT3G56800	41.791	67	39	0	74	140	7	73	2.60e-11	58.2
MS.gene060446.t1	AT2G27030	33.333	141	91	3	2	140	8	147	5.32e-22	85.9
MS.gene060446.t1	AT2G27030	41.791	67	39	0	74	140	7	73	2.60e-11	58.2
MS.gene060446.t1	AT2G41110	33.333	141	91	3	2	140	8	147	5.32e-22	85.9
MS.gene060446.t1	AT2G41110	41.791	67	39	0	74	140	7	73	2.60e-11	58.2
MS.gene060446.t1	AT3G43810	33.333	141	91	3	2	140	8	147	6.46e-22	85.5
MS.gene060446.t1	AT3G43810	41.791	67	39	0	74	140	7	73	2.77e-11	58.2
MS.gene060446.t1	AT2G43290	35.374	147	80	4	5	140	64	206	9.05e-22	87.0
MS.gene060446.t1	AT5G37780	31.915	141	93	3	2	140	8	147	1.33e-21	84.7
MS.gene060446.t1	AT1G66410	31.915	141	93	3	2	140	8	147	1.33e-21	84.7
MS.gene060446.t1	AT3G22930	31.206	141	95	2	2	141	31	170	1.54e-21	85.5
MS.gene060446.t1	AT2G27030	33.333	141	91	3	2	140	8	147	2.04e-21	85.1
MS.gene060446.t1	AT2G27030	41.791	67	39	0	74	140	7	73	8.46e-11	57.4
MS.gene060446.t1	AT4G14640	31.206	141	95	2	2	141	9	148	2.32e-21	84.3
MS.gene060446.t1	AT1G05990	35.714	140	85	3	5	140	4	142	2.55e-21	84.0
MS.gene060446.t1	AT3G43810	33.333	141	91	3	2	140	8	147	2.92e-21	85.5
MS.gene060446.t1	AT3G43810	41.791	67	39	0	74	140	7	73	9.86e-11	57.8
MS.gene060446.t1	AT2G15680	35.252	139	84	3	4	140	48	182	3.24e-21	84.7
MS.gene060446.t1	AT2G36180	34.532	139	80	3	9	140	3	137	5.09e-21	83.2
MS.gene060446.t1	AT4G12860	35.664	143	87	4	1	140	1	141	5.75e-21	83.2
MS.gene060446.t1	AT2G41100	32.051	156	88	2	2	140	8	162	2.09e-20	85.1
MS.gene060446.t1	AT2G41100	31.210	157	89	2	2	140	97	252	5.63e-20	84.0
MS.gene060446.t1	AT2G41100	32.051	156	88	2	2	140	8	162	2.09e-20	85.1
MS.gene060446.t1	AT2G41100	31.210	157	89	2	2	140	97	252	5.63e-20	84.0
MS.gene060446.t1	AT2G41100	31.210	157	89	2	2	140	62	217	3.37e-20	84.3
MS.gene060446.t1	AT2G41100	29.921	127	71	2	31	140	2	127	1.96e-11	60.5
MS.gene060446.t1	AT2G41100	31.210	157	89	2	2	140	62	217	3.37e-20	84.3
MS.gene060446.t1	AT2G41100	29.921	127	71	2	31	140	2	127	1.96e-11	60.5
MS.gene060446.t1	AT2G41100	31.210	157	89	2	2	140	62	217	3.37e-20	84.3
MS.gene060446.t1	AT2G41100	29.921	127	71	2	31	140	2	127	1.96e-11	60.5
MS.gene060446.t1	AT3G01830	47.273	110	54	2	1	108	6	113	4.34e-20	80.5
MS.gene060446.t1	AT3G59440	33.333	135	87	2	8	140	53	186	7.23e-20	81.6
MS.gene060446.t1	AT2G41110	30.719	153	91	4	2	140	8	159	1.09e-19	80.1
MS.gene060446.t1	AT4G03290	33.099	142	88	3	5	140	4	144	9.71e-19	77.4
MS.gene060446.t1	AT1G18530	33.099	142	91	3	2	140	3	143	1.21e-18	77.4
MS.gene060446.t1	AT3G07490	35.252	139	86	3	5	140	4	141	2.01e-18	76.6
MS.gene060446.t1	AT3G50360	33.094	139	91	2	3	140	24	161	3.27e-18	76.6
MS.gene060446.t1	AT3G10190	31.579	133	90	1	9	140	73	205	1.24e-17	75.9
MS.gene060446.t1	AT5G37780	28.846	156	93	4	2	140	8	162	1.64e-17	74.7
MS.gene060446.t1	AT1G32250	30.986	142	90	3	2	136	12	152	7.68e-17	72.8
MS.gene060446.t1	AT3G03400	34.615	130	75	3	10	133	9	134	8.60e-17	72.0
MS.gene060446.t1	AT5G37780	26.946	167	93	4	2	140	8	173	7.81e-16	70.5
MS.gene060446.t1	AT4G14640	30.894	123	83	2	20	141	9	130	1.03e-15	69.3
MS.gene060446.t1	AT3G25600	30.282	142	95	3	2	140	8	148	1.53e-15	69.3
MS.gene060446.t1	AT5G37780	31.707	123	81	3	20	140	13	134	1.88e-15	68.6
MS.gene060446.t1	AT1G66410	31.707	123	81	3	20	140	36	157	2.64e-15	68.9
MS.gene060446.t1	AT4G37010	28.777	139	97	2	3	140	28	165	2.69e-15	68.9
MS.gene060446.t1	AT4G37010	28.777	139	97	2	3	140	24	161	2.73e-15	68.9
MS.gene060446.t1	AT2G41090	28.777	139	96	2	3	141	9	144	3.33e-15	69.3
MS.gene060446.t1	AT3G51920	29.078	141	98	2	2	141	8	147	4.64e-15	67.8
MS.gene060446.t1	AT2G41410	29.371	143	98	2	2	141	66	208	2.82e-14	67.4
MS.gene060446.t1	AT1G66410	34.783	92	58	2	51	140	20	111	4.56e-14	64.3
MS.gene060446.t1	AT1G66410	34.783	92	58	2	51	140	20	111	4.56e-14	64.3
MS.gene060446.t1	AT4G20780	32.278	158	81	5	6	140	29	183	5.10e-14	66.2
MS.gene060446.t1	AT3G43810	32.727	110	71	3	33	140	3	111	9.15e-14	63.5
MS.gene060446.t1	AT3G43810	32.727	110	71	3	33	140	3	111	9.15e-14	63.5
MS.gene060446.t1	AT3G03000	30.657	137	92	2	2	136	16	151	1.15e-13	64.7
MS.gene060446.t1	AT1G74740	31.944	144	89	4	1	140	359	497	2.45e-13	66.2
MS.gene060446.t1	AT5G44460	33.333	150	82	6	6	140	28	174	8.29e-13	62.8
MS.gene060446.t1	AT1G76040	32.593	135	85	3	8	140	180	310	9.47e-13	64.3
MS.gene060446.t1	AT1G76040	32.593	135	85	3	8	140	180	310	9.47e-13	64.3
MS.gene060446.t1	AT3G03410	31.343	134	83	2	8	141	4	128	9.99e-13	61.2
MS.gene060446.t1	AT1G76040	32.593	135	85	3	8	140	418	548	1.34e-12	63.9
MS.gene060446.t1	AT5G12180	33.083	133	83	3	10	140	382	510	1.44e-12	63.9
MS.gene060446.t1	AT4G23650	30.827	133	86	3	10	140	387	515	2.19e-12	63.5
MS.gene060446.t1	AT5G17480	40.625	64	36	1	5	68	8	69	2.25e-12	59.3
MS.gene060446.t1	AT5G19360	32.331	133	84	3	10	140	377	505	2.25e-12	63.5
MS.gene060446.t1	AT1G12310	28.472	144	93	3	2	141	9	146	4.63e-12	60.1
MS.gene060446.t1	AT3G03430	36.765	68	41	1	5	72	8	73	8.04e-12	57.8
MS.gene060446.t1	AT3G51850	29.008	131	92	1	10	140	363	492	1.54e-11	61.2
MS.gene060446.t1	AT2G31500	32.394	142	92	3	2	140	367	507	1.64e-11	60.8
MS.gene060446.t1	AT4G04695	30.075	133	87	3	10	140	340	468	2.00e-11	60.8
MS.gene060446.t1	AT1G62820	26.950	141	99	2	2	141	9	146	5.56e-11	57.4
MS.gene060446.t1	AT1G50700	30.075	133	87	3	10	140	382	510	6.22e-11	59.3
MS.gene060446.t1	AT5G19450	27.143	140	102	0	1	140	357	496	7.28e-11	58.9
MS.gene060446.t1	AT5G19450	27.143	140	102	0	1	140	357	496	7.28e-11	58.9

Find 29 sgRNAs with CRISPR-Local

Find 37 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCAGATGGTGATGGATTGTT+GGG	0.312082	7.1:+66867633	MS.gene060446:CDS
ATCTCTAAGTTTGATCTTGA+TGG	0.328179	7.1:+66867834	MS.gene060446:CDS
CTCAGATGGTGATGGATTGT+TGG	0.354318	7.1:+66867632	MS.gene060446:CDS
GGTTGAACACACGTTCATAT+TGG	0.358450	7.1:-66867491	None:intergenic
AAAAGAATGCTTAGTAGGTT+AGG	0.383946	7.1:+66867777	MS.gene060446:CDS
GTCTTAAAAGAATGCTTAGT+AGG	0.416556	7.1:+66867772	MS.gene060446:CDS
AGAGGCGGCCGTGGCAATCT+TGG	0.417019	7.1:+66867608	MS.gene060446:CDS
GTTTGTGGAGGGTGCAAAAG+AGG	0.441772	7.1:+66867674	MS.gene060446:CDS
AAGTTTGATCTTGATGGGGA+TGG	0.469441	7.1:+66867840	MS.gene060446:CDS
TCTCTAAGTTTGATCTTGAT+GGG	0.474554	7.1:+66867835	MS.gene060446:CDS
GATCGGTGATGAAAAGTTAT+CGG	0.478907	7.1:+66867575	MS.gene060446:CDS
AGAGGATGTAGAGGCGGCCG+TGG	0.516831	7.1:+66867599	MS.gene060446:CDS
TTTAAGTTGTATGAGATGGA+TGG	0.526008	7.1:+66867726	MS.gene060446:CDS
AGTTTGATCTTGATGGGGAT+GGG	0.530544	7.1:+66867841	MS.gene060446:CDS
GAAAGTGAATGACTTAAAAG+AGG	0.531408	7.1:+66867701	MS.gene060446:CDS
ACACATTGTCGCAGCTCAGC+CGG	0.534198	7.1:-66867546	None:intergenic
TGATGAAAAGTTATCGGCAG+AGG	0.566777	7.1:+66867581	MS.gene060446:CDS
CTCTAAGTTTGATCTTGATG+GGG	0.585858	7.1:+66867836	MS.gene060446:CDS
GTGGCAATCTTGGACTCAGA+TGG	0.588921	7.1:+66867618	MS.gene060446:CDS
CAGATGGTGATGGATTGTTG+GGG	0.592987	7.1:+66867634	MS.gene060446:CDS
TTGTATGAGATGGATGGAAG+TGG	0.607357	7.1:+66867732	MS.gene060446:CDS
ATCTTGGACTCAGATGGTGA+TGG	0.610181	7.1:+66867624	MS.gene060446:CDS
TGGAGATGGTAAGATATCGC+CGG	0.613279	7.1:+66867527	MS.gene060446:CDS
CGACAATGTGTTGAGGCGAT+CGG	0.636267	7.1:+66867558	MS.gene060446:CDS
GTTATCGGCAGAGGATGTAG+AGG	0.638879	7.1:+66867590	MS.gene060446:CDS
ATCTGAGTCCAAGATTGCCA+CGG	0.643059	7.1:-66867616	None:intergenic
TATTTGTGATGTTATGGACA+AGG	0.644981	7.1:+66867464	None:intergenic
ATCGGCAGAGGATGTAGAGG+CGG	0.662701	7.1:+66867593	MS.gene060446:CDS
TGAGCTGCGACAATGTGTTG+AGG	0.706960	7.1:+66867551	MS.gene060446:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATCAGTTTTGATGAATTTA+AGG	+	chr7.1:66867866-66867885	MS.gene060446:CDS	20.0%
	AAAAGAATGCTTAGTAGGTT+AGG	+	chr7.1:66867777-66867796	MS.gene060446:CDS	30.0%
	ATCTCTAAGTTTGATCTTGA+TGG	+	chr7.1:66867834-66867853	MS.gene060446:CDS	30.0%
	GAAAGTGAATGACTTAAAAG+AGG	+	chr7.1:66867701-66867720	MS.gene060446:CDS	30.0%
	GTCTTAAAAGAATGCTTAGT+AGG	+	chr7.1:66867772-66867791	MS.gene060446:CDS	30.0%
	TCTCTAAGTTTGATCTTGAT+GGG	+	chr7.1:66867835-66867854	MS.gene060446:CDS	30.0%
!	CATCTCCATTTTCATCAAAA+CGG	-	chr7.1:66867515-66867534	None:intergenic	30.0%
!	TGATGATTTTGTGAAGTTTG+TGG	+	chr7.1:66867659-66867678	MS.gene060446:CDS	30.0%
!!	TTCAACCGTTTTGATGAAAA+TGG	+	chr7.1:66867507-66867526	MS.gene060446:CDS	30.0%
!!	TTTAAGTTGTATGAGATGGA+TGG	+	chr7.1:66867726-66867745	MS.gene060446:CDS	30.0%
!!!	AGCATTCTTTTAAGACTCTT+AGG	-	chr7.1:66867768-66867787	None:intergenic	30.0%
	CTCTAAGTTTGATCTTGATG+GGG	+	chr7.1:66867836-66867855	MS.gene060446:CDS	35.0%
	GATCGGTGATGAAAAGTTAT+CGG	+	chr7.1:66867575-66867594	MS.gene060446:CDS	35.0%
!	GATTTTGTGAAGTTTGTGGA+GGG	+	chr7.1:66867663-66867682	MS.gene060446:CDS	35.0%
!	TGATTTTGTGAAGTTTGTGG+AGG	+	chr7.1:66867662-66867681	MS.gene060446:CDS	35.0%
!!	CGTTTTGATGAAAATGGAGA+TGG	+	chr7.1:66867513-66867532	MS.gene060446:CDS	35.0%
!!!	GGCTTTTAAGTTGTATGAGA+TGG	+	chr7.1:66867722-66867741	MS.gene060446:CDS	35.0%
	AAGTTTGATCTTGATGGGGA+TGG	+	chr7.1:66867840-66867859	MS.gene060446:CDS	40.0%
	AGTTTGATCTTGATGGGGAT+GGG	+	chr7.1:66867841-66867860	MS.gene060446:CDS	40.0%
	GGTTGAACACACGTTCATAT+TGG	-	chr7.1:66867494-66867513	None:intergenic	40.0%
	TGATGAAAAGTTATCGGCAG+AGG	+	chr7.1:66867581-66867600	MS.gene060446:CDS	40.0%
	TTGTATGAGATGGATGGAAG+TGG	+	chr7.1:66867732-66867751	MS.gene060446:CDS	40.0%
!!	TCAGATGGTGATGGATTGTT+GGG	+	chr7.1:66867633-66867652	MS.gene060446:CDS	40.0%
	ATCTGAGTCCAAGATTGCCA+CGG	-	chr7.1:66867619-66867638	None:intergenic	45.0%
	ATCTTGGACTCAGATGGTGA+TGG	+	chr7.1:66867624-66867643	MS.gene060446:CDS	45.0%
	TGGAGATGGTAAGATATCGC+CGG	+	chr7.1:66867527-66867546	MS.gene060446:CDS	45.0%
!!	CAGATGGTGATGGATTGTTG+GGG	+	chr7.1:66867634-66867653	MS.gene060446:CDS	45.0%
!!	CTCAGATGGTGATGGATTGT+TGG	+	chr7.1:66867632-66867651	MS.gene060446:CDS	45.0%
	CGACAATGTGTTGAGGCGAT+CGG	+	chr7.1:66867558-66867577	MS.gene060446:CDS	50.0%
	GTGGCAATCTTGGACTCAGA+TGG	+	chr7.1:66867618-66867637	MS.gene060446:CDS	50.0%
	GTTATCGGCAGAGGATGTAG+AGG	+	chr7.1:66867590-66867609	MS.gene060446:CDS	50.0%
	TGAGCTGCGACAATGTGTTG+AGG	+	chr7.1:66867551-66867570	MS.gene060446:CDS	50.0%
!	GTTTGTGGAGGGTGCAAAAG+AGG	+	chr7.1:66867674-66867693	MS.gene060446:CDS	50.0%
	ACACATTGTCGCAGCTCAGC+CGG	-	chr7.1:66867549-66867568	None:intergenic	55.0%
	ATCGGCAGAGGATGTAGAGG+CGG	+	chr7.1:66867593-66867612	MS.gene060446:CDS	55.0%
	AGAGGATGTAGAGGCGGCCG+TGG	+	chr7.1:66867599-66867618	MS.gene060446:CDS	65.0%
	AGAGGCGGCCGTGGCAATCT+TGG	+	chr7.1:66867608-66867627	MS.gene060446:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.1	gene	66867477	66867902	66867477	ID=MS.gene060446
chr7.1	mRNA	66867477	66867902	66867477	ID=MS.gene060446.t1;Parent=MS.gene060446
chr7.1	exon	66867477	66867902	66867477	ID=MS.gene060446.t1.exon1;Parent=MS.gene060446.t1
chr7.1	CDS	66867477	66867902	66867477	ID=cds.MS.gene060446.t1;Parent=MS.gene060446.t1

Gene Sequence

>MS.gene060446

ATGGACAAGGTAAGCCAATATGAACGTGTGTTCAACCGTTTTGATGAAAATGGAGATGGTAAGATATCGCCGGCTGAGCTGCGACAATGTGTTGAGGCGATCGGTGATGAAAAGTTATCGGCAGAGGATGTAGAGGCGGCCGTGGCAATCTTGGACTCAGATGGTGATGGATTGTTGGGGTTTGATGATTTTGTGAAGTTTGTGGAGGGTGCAAAAGAGGAAGAGAAAGTGAATGACTTAAAAGAGGCTTTTAAGTTGTATGAGATGGATGGAAGTGGTTGCATAACACCTAAGAGTCTTAAAAGAATGCTTAGTAGGTTAGGTGATTCTAGAAGTATAGATGAGTGTCAACTTATGATCTCTAAGTTTGATCTTGATGGGGATGGGAAAATCAGTTTTGATGAATTTAAGGTCATGATGTTGTAA

Protein sequence

>MS.gene060446.t1

MDKVSQYERVFNRFDENGDGKISPAELRQCVEAIGDEKLSAEDVEAAVAILDSDGDGLLGFDDFVKFVEGAKEEEKVNDLKEAFKLYEMDGSGCITPKSLKRMLSRLGDSRSIDECQLMISKFDLDGDGKISFDEFKVMML