Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85260.t1 | XP_013465463.1 | 95.5 | 336 | 12 | 1 | 1 | 333 | 1 | 336 | 7.00E-188 | 666.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85260.t1 | Q9FLV5 | 63.4 | 336 | 115 | 3 | 4 | 332 | 1 | 335 | 3.1e-120 | 433.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85260.t1 | A0A072VDI7 | 95.5 | 336 | 12 | 1 | 1 | 333 | 1 | 336 | 5.0e-188 | 666.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051996 | MS.gene85260 | 0.807163 | 5.78E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene85260 | 0.822205 | 2.68E-53 | -1.69E-46 |
| MS.gene054277 | MS.gene85260 | 0.82748 | 1.53E-54 | -1.69E-46 |
| MS.gene054742 | MS.gene85260 | 0.831664 | 1.47E-55 | -1.69E-46 |
| MS.gene056330 | MS.gene85260 | 0.831823 | 1.34E-55 | -1.69E-46 |
| MS.gene056680 | MS.gene85260 | 0.816738 | 4.74E-52 | -1.69E-46 |
| MS.gene056920 | MS.gene85260 | 0.815915 | 7.24E-52 | -1.69E-46 |
| MS.gene059892 | MS.gene85260 | 0.801959 | 7.04E-49 | -1.69E-46 |
| MS.gene060087 | MS.gene85260 | 0.809879 | 1.52E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene85260 | MS.gene055984 | PPI |
| MS.gene85260 | MS.gene034512 | PPI |
| MS.gene85260 | MS.gene52672 | PPI |
| MS.gene85260 | MS.gene37256 | PPI |
| MS.gene85260 | MS.gene04636 | PPI |
| MS.gene85260 | MS.gene018002 | PPI |
| MS.gene85260 | MS.gene40613 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85260.t1 | MTR_2g099175 | 95.536 | 336 | 12 | 1 | 1 | 333 | 1 | 336 | 0.0 | 676 |
| MS.gene85260.t1 | MTR_7g086870 | 44.371 | 302 | 154 | 4 | 33 | 332 | 22 | 311 | 1.39e-80 | 248 |
| MS.gene85260.t1 | MTR_7g086820 | 40.594 | 303 | 169 | 4 | 33 | 333 | 20 | 313 | 6.69e-76 | 236 |
| MS.gene85260.t1 | MTR_7g093370 | 38.988 | 336 | 183 | 8 | 5 | 332 | 50 | 371 | 6.31e-75 | 235 |
| MS.gene85260.t1 | MTR_1g054205 | 41.748 | 309 | 167 | 7 | 32 | 332 | 23 | 326 | 2.74e-74 | 232 |
| MS.gene85260.t1 | MTR_5g022870 | 39.458 | 332 | 180 | 8 | 4 | 332 | 3 | 316 | 1.09e-70 | 223 |
| MS.gene85260.t1 | MTR_2g040000 | 38.485 | 330 | 190 | 5 | 12 | 333 | 8 | 332 | 7.15e-70 | 221 |
| MS.gene85260.t1 | MTR_8g075100 | 38.614 | 303 | 174 | 6 | 33 | 332 | 26 | 319 | 2.96e-69 | 219 |
| MS.gene85260.t1 | MTR_2g029820 | 37.135 | 342 | 193 | 7 | 1 | 332 | 1 | 330 | 4.67e-69 | 219 |
| MS.gene85260.t1 | MTR_2g029815 | 37.463 | 339 | 192 | 8 | 3 | 333 | 5 | 331 | 6.75e-69 | 219 |
| MS.gene85260.t1 | MTR_2g088770 | 38.080 | 323 | 188 | 6 | 15 | 332 | 10 | 325 | 6.86e-69 | 218 |
| MS.gene85260.t1 | MTR_6g027440 | 39.934 | 303 | 172 | 4 | 32 | 332 | 20 | 314 | 3.61e-68 | 216 |
| MS.gene85260.t1 | MTR_4g114210 | 39.550 | 311 | 176 | 5 | 28 | 332 | 16 | 320 | 6.34e-67 | 213 |
| MS.gene85260.t1 | MTR_2g008710 | 37.500 | 336 | 192 | 6 | 2 | 332 | 3 | 325 | 6.58e-67 | 213 |
| MS.gene85260.t1 | MTR_4g125940 | 37.942 | 311 | 181 | 5 | 30 | 333 | 25 | 330 | 9.95e-67 | 213 |
| MS.gene85260.t1 | MTR_2g078610 | 37.879 | 330 | 170 | 7 | 32 | 328 | 75 | 402 | 7.38e-66 | 213 |
| MS.gene85260.t1 | MTR_4g046713 | 38.080 | 323 | 190 | 4 | 15 | 332 | 9 | 326 | 8.15e-66 | 210 |
| MS.gene85260.t1 | MTR_7g107520 | 35.928 | 334 | 195 | 6 | 3 | 332 | 2 | 320 | 1.75e-65 | 209 |
| MS.gene85260.t1 | MTR_3g105790 | 38.957 | 326 | 183 | 6 | 11 | 332 | 9 | 322 | 3.02e-65 | 209 |
| MS.gene85260.t1 | MTR_2g029830 | 37.179 | 312 | 178 | 7 | 32 | 333 | 27 | 330 | 6.63e-65 | 209 |
| MS.gene85260.t1 | MTR_2g067440 | 37.231 | 325 | 176 | 6 | 32 | 328 | 59 | 383 | 7.35e-65 | 210 |
| MS.gene85260.t1 | MTR_1g101830 | 36.890 | 328 | 188 | 7 | 9 | 332 | 10 | 322 | 1.23e-64 | 207 |
| MS.gene85260.t1 | MTR_2g077990 | 37.195 | 328 | 175 | 6 | 32 | 328 | 75 | 402 | 1.45e-64 | 209 |
| MS.gene85260.t1 | MTR_4g125940 | 40.580 | 276 | 152 | 5 | 65 | 333 | 5 | 275 | 2.11e-64 | 205 |
| MS.gene85260.t1 | MTR_2g028980 | 36.036 | 333 | 188 | 8 | 11 | 333 | 14 | 331 | 4.20e-64 | 207 |
| MS.gene85260.t1 | MTR_5g014100 | 38.961 | 308 | 172 | 6 | 36 | 332 | 29 | 331 | 5.35e-64 | 206 |
| MS.gene85260.t1 | MTR_5g017850 | 39.542 | 306 | 175 | 5 | 32 | 332 | 26 | 326 | 6.51e-64 | 205 |
| MS.gene85260.t1 | MTR_4g133800 | 40.134 | 299 | 168 | 6 | 37 | 333 | 45 | 334 | 8.21e-64 | 206 |
| MS.gene85260.t1 | MTR_2g029850 | 35.671 | 328 | 199 | 6 | 12 | 332 | 8 | 330 | 1.55e-63 | 205 |
| MS.gene85260.t1 | MTR_8g076820 | 37.126 | 334 | 177 | 9 | 14 | 332 | 15 | 330 | 1.65e-63 | 204 |
| MS.gene85260.t1 | MTR_3g092990 | 36.716 | 335 | 194 | 6 | 3 | 332 | 5 | 326 | 3.32e-63 | 204 |
| MS.gene85260.t1 | MTR_5g017860 | 39.216 | 306 | 176 | 5 | 32 | 332 | 26 | 326 | 5.77e-63 | 203 |
| MS.gene85260.t1 | MTR_5g021060 | 38.284 | 303 | 176 | 6 | 36 | 332 | 33 | 330 | 6.72e-63 | 203 |
| MS.gene85260.t1 | MTR_1g086320 | 37.576 | 330 | 194 | 7 | 11 | 332 | 8 | 333 | 7.18e-63 | 203 |
| MS.gene85260.t1 | MTR_3g094650 | 37.338 | 308 | 174 | 6 | 32 | 332 | 27 | 322 | 1.34e-62 | 202 |
| MS.gene85260.t1 | MTR_5g049280 | 37.888 | 322 | 171 | 11 | 28 | 332 | 28 | 337 | 3.60e-62 | 201 |
| MS.gene85260.t1 | MTR_5g083860 | 35.866 | 329 | 189 | 7 | 11 | 332 | 12 | 325 | 1.20e-61 | 199 |
| MS.gene85260.t1 | MTR_1g025980 | 38.333 | 300 | 172 | 7 | 33 | 328 | 24 | 314 | 1.58e-61 | 199 |
| MS.gene85260.t1 | MTR_2g029800 | 34.743 | 331 | 198 | 7 | 12 | 332 | 8 | 330 | 1.67e-61 | 200 |
| MS.gene85260.t1 | MTR_2g029860 | 35.370 | 311 | 183 | 6 | 32 | 332 | 28 | 330 | 1.90e-61 | 200 |
| MS.gene85260.t1 | MTR_2g029740 | 34.242 | 330 | 205 | 6 | 11 | 333 | 7 | 331 | 4.78e-61 | 199 |
| MS.gene85260.t1 | MTR_7g026990 | 37.542 | 301 | 170 | 5 | 37 | 332 | 35 | 322 | 6.61e-61 | 197 |
| MS.gene85260.t1 | MTR_1g086490 | 37.538 | 333 | 197 | 5 | 11 | 332 | 8 | 340 | 1.56e-60 | 197 |
| MS.gene85260.t1 | MTR_2g029750 | 34.118 | 340 | 208 | 6 | 1 | 333 | 1 | 331 | 3.03e-60 | 197 |
| MS.gene85260.t1 | MTR_2g008160 | 40.193 | 311 | 170 | 7 | 30 | 332 | 21 | 323 | 1.20e-59 | 194 |
| MS.gene85260.t1 | MTR_4g029170 | 37.785 | 307 | 172 | 7 | 33 | 332 | 27 | 321 | 1.33e-59 | 194 |
| MS.gene85260.t1 | MTR_7g029030 | 33.432 | 338 | 201 | 7 | 1 | 332 | 1 | 320 | 2.34e-59 | 193 |
| MS.gene85260.t1 | MTR_2g029560 | 36.786 | 280 | 165 | 5 | 60 | 332 | 51 | 325 | 4.65e-59 | 193 |
| MS.gene85260.t1 | MTR_1g038680 | 37.459 | 307 | 180 | 7 | 34 | 332 | 30 | 332 | 8.63e-59 | 192 |
| MS.gene85260.t1 | MTR_2g078280 | 36.478 | 318 | 171 | 6 | 32 | 318 | 75 | 392 | 9.48e-59 | 194 |
| MS.gene85260.t1 | MTR_3g072190 | 35.207 | 338 | 193 | 6 | 1 | 332 | 1 | 318 | 9.62e-59 | 192 |
| MS.gene85260.t1 | MTR_1g077000 | 35.821 | 335 | 198 | 4 | 1 | 332 | 7 | 327 | 1.96e-58 | 191 |
| MS.gene85260.t1 | MTR_4g087965 | 35.736 | 333 | 200 | 7 | 5 | 328 | 15 | 342 | 2.02e-58 | 192 |
| MS.gene85260.t1 | MTR_5g074860 | 38.436 | 307 | 166 | 9 | 33 | 329 | 29 | 322 | 2.61e-58 | 191 |
| MS.gene85260.t1 | MTR_4g132490 | 35.119 | 336 | 201 | 6 | 5 | 332 | 1 | 327 | 3.24e-58 | 191 |
| MS.gene85260.t1 | MTR_3g094630 | 36.585 | 328 | 185 | 7 | 12 | 332 | 11 | 322 | 4.33e-58 | 190 |
| MS.gene85260.t1 | MTR_2g029830 | 38.868 | 265 | 144 | 7 | 79 | 333 | 6 | 262 | 5.69e-58 | 189 |
| MS.gene85260.t1 | MTR_4g029200 | 35.897 | 312 | 180 | 6 | 29 | 332 | 39 | 338 | 6.91e-58 | 190 |
| MS.gene85260.t1 | MTR_4g083710 | 36.012 | 336 | 190 | 9 | 7 | 332 | 4 | 324 | 9.28e-58 | 189 |
| MS.gene85260.t1 | MTR_3g094670 | 36.280 | 328 | 186 | 7 | 12 | 332 | 11 | 322 | 1.21e-57 | 189 |
| MS.gene85260.t1 | MTR_1g090760 | 33.529 | 340 | 210 | 6 | 1 | 333 | 1 | 331 | 1.73e-57 | 189 |
| MS.gene85260.t1 | MTR_2g029730 | 37.143 | 280 | 164 | 4 | 60 | 332 | 52 | 326 | 1.82e-57 | 189 |
| MS.gene85260.t1 | MTR_7g072510 | 32.934 | 334 | 197 | 7 | 4 | 332 | 1 | 312 | 5.63e-57 | 187 |
| MS.gene85260.t1 | MTR_3g466200 | 34.663 | 326 | 193 | 6 | 13 | 332 | 9 | 320 | 7.65e-57 | 187 |
| MS.gene85260.t1 | MTR_4g031140 | 34.426 | 305 | 187 | 5 | 33 | 332 | 28 | 324 | 8.76e-57 | 187 |
| MS.gene85260.t1 | MTR_4g029180 | 37.171 | 304 | 172 | 6 | 36 | 332 | 30 | 321 | 1.04e-56 | 187 |
| MS.gene85260.t1 | MTR_1g022970 | 37.134 | 307 | 181 | 5 | 33 | 332 | 46 | 347 | 1.97e-56 | 187 |
| MS.gene85260.t1 | MTR_2g084010 | 34.756 | 328 | 192 | 7 | 11 | 332 | 7 | 318 | 2.43e-56 | 186 |
| MS.gene85260.t1 | MTR_4g030890 | 35.667 | 300 | 180 | 5 | 38 | 332 | 105 | 396 | 3.24e-56 | 188 |
| MS.gene85260.t1 | MTR_0147s0010 | 36.102 | 313 | 172 | 6 | 33 | 328 | 77 | 378 | 4.69e-56 | 187 |
| MS.gene85260.t1 | MTR_1g009750 | 32.849 | 344 | 203 | 7 | 1 | 332 | 1 | 328 | 7.74e-56 | 184 |
| MS.gene85260.t1 | MTR_2g084080 | 33.033 | 333 | 202 | 5 | 5 | 332 | 1 | 317 | 8.45e-56 | 184 |
| MS.gene85260.t1 | MTR_5g074970 | 36.156 | 307 | 181 | 5 | 32 | 332 | 29 | 326 | 9.28e-56 | 184 |
| MS.gene85260.t1 | MTR_3g467600 | 36.637 | 333 | 181 | 10 | 11 | 332 | 11 | 324 | 1.05e-55 | 184 |
| MS.gene85260.t1 | MTR_2g029910 | 33.531 | 337 | 212 | 6 | 5 | 333 | 1 | 333 | 1.10e-55 | 185 |
| MS.gene85260.t1 | MTR_3g092990 | 35.522 | 335 | 187 | 7 | 3 | 332 | 5 | 315 | 1.13e-55 | 184 |
| MS.gene85260.t1 | MTR_0155s0040 | 33.134 | 335 | 201 | 6 | 1 | 332 | 1 | 315 | 1.30e-55 | 184 |
| MS.gene85260.t1 | MTR_2g084020 | 34.146 | 328 | 194 | 7 | 11 | 332 | 7 | 318 | 2.11e-55 | 183 |
| MS.gene85260.t1 | MTR_2g084110 | 34.451 | 328 | 192 | 7 | 11 | 332 | 7 | 317 | 2.26e-55 | 183 |
| MS.gene85260.t1 | MTR_6g043460 | 34.639 | 332 | 196 | 6 | 11 | 333 | 10 | 329 | 3.32e-55 | 184 |
| MS.gene85260.t1 | MTR_5g016010 | 33.333 | 309 | 185 | 5 | 32 | 328 | 26 | 325 | 4.47e-55 | 182 |
| MS.gene85260.t1 | MTR_4g127670 | 35.505 | 307 | 186 | 5 | 32 | 332 | 23 | 323 | 6.67e-55 | 182 |
| MS.gene85260.t1 | MTR_4g122640 | 36.877 | 301 | 177 | 5 | 38 | 332 | 43 | 336 | 1.28e-54 | 182 |
| MS.gene85260.t1 | MTR_2g437770 | 37.294 | 303 | 176 | 6 | 33 | 332 | 50 | 341 | 1.40e-54 | 182 |
| MS.gene85260.t1 | MTR_2g084000 | 35.061 | 328 | 195 | 8 | 11 | 332 | 4 | 319 | 1.57e-54 | 181 |
| MS.gene85260.t1 | MTR_4g029190 | 37.500 | 296 | 170 | 6 | 42 | 332 | 55 | 340 | 2.06e-54 | 181 |
| MS.gene85260.t1 | MTR_2g008730 | 33.832 | 334 | 179 | 6 | 4 | 332 | 5 | 301 | 3.59e-54 | 179 |
| MS.gene85260.t1 | MTR_5g074740 | 34.743 | 331 | 193 | 9 | 13 | 333 | 5 | 322 | 9.26e-54 | 179 |
| MS.gene85260.t1 | MTR_2g084090 | 33.951 | 324 | 195 | 7 | 15 | 332 | 8 | 318 | 2.31e-53 | 178 |
| MS.gene85260.t1 | MTR_5g074760 | 34.018 | 341 | 193 | 11 | 3 | 333 | 4 | 322 | 3.03e-53 | 178 |
| MS.gene85260.t1 | MTR_6g043240 | 32.635 | 334 | 205 | 7 | 6 | 332 | 11 | 331 | 1.55e-52 | 177 |
| MS.gene85260.t1 | MTR_4g132110 | 34.385 | 317 | 191 | 5 | 24 | 333 | 23 | 329 | 1.85e-52 | 176 |
| MS.gene85260.t1 | MTR_1g066640 | 33.550 | 307 | 193 | 4 | 30 | 332 | 24 | 323 | 2.56e-52 | 176 |
| MS.gene85260.t1 | MTR_3g466180 | 36.601 | 306 | 177 | 6 | 32 | 332 | 30 | 323 | 3.42e-52 | 175 |
| MS.gene85260.t1 | MTR_4g074995 | 34.740 | 308 | 172 | 8 | 32 | 332 | 23 | 308 | 4.17e-52 | 174 |
| MS.gene85260.t1 | MTR_1g115900 | 32.628 | 331 | 208 | 6 | 7 | 332 | 1 | 321 | 5.13e-52 | 175 |
| MS.gene85260.t1 | MTR_1g066710 | 32.248 | 307 | 197 | 4 | 30 | 332 | 24 | 323 | 5.34e-52 | 174 |
| MS.gene85260.t1 | MTR_5g074710 | 35.256 | 312 | 179 | 9 | 32 | 333 | 24 | 322 | 6.28e-52 | 174 |
| MS.gene85260.t1 | MTR_2g067450 | 35.390 | 308 | 177 | 5 | 32 | 328 | 10 | 306 | 1.03e-51 | 173 |
| MS.gene85260.t1 | MTR_1g066380 | 32.787 | 305 | 194 | 4 | 32 | 332 | 26 | 323 | 8.54e-51 | 171 |
| MS.gene85260.t1 | MTR_1g066680 | 33.225 | 307 | 193 | 5 | 30 | 332 | 24 | 322 | 2.01e-50 | 171 |
| MS.gene85260.t1 | MTR_4g132110 | 33.851 | 322 | 191 | 6 | 24 | 333 | 23 | 334 | 2.61e-50 | 171 |
| MS.gene85260.t1 | MTR_6g043280 | 32.424 | 330 | 203 | 6 | 11 | 332 | 15 | 332 | 3.98e-50 | 170 |
| MS.gene85260.t1 | MTR_7g072480 | 32.923 | 325 | 197 | 6 | 13 | 332 | 8 | 316 | 8.09e-50 | 169 |
| MS.gene85260.t1 | MTR_0286s0010 | 36.364 | 308 | 183 | 7 | 32 | 332 | 33 | 334 | 1.67e-49 | 168 |
| MS.gene85260.t1 | MTR_6g008075 | 36.364 | 308 | 183 | 7 | 32 | 332 | 33 | 334 | 1.67e-49 | 168 |
| MS.gene85260.t1 | MTR_4g074990 | 32.934 | 334 | 187 | 9 | 7 | 332 | 1 | 305 | 2.16e-49 | 167 |
| MS.gene85260.t1 | MTR_4g095450 | 32.787 | 305 | 187 | 6 | 32 | 328 | 26 | 320 | 3.48e-49 | 167 |
| MS.gene85260.t1 | MTR_3g072190 | 36.122 | 263 | 149 | 5 | 76 | 332 | 2 | 251 | 1.83e-48 | 163 |
| MS.gene85260.t1 | MTR_5g033470 | 31.833 | 311 | 201 | 4 | 30 | 332 | 70 | 377 | 6.34e-48 | 166 |
| MS.gene85260.t1 | MTR_8g062780 | 31.515 | 330 | 212 | 6 | 11 | 332 | 1 | 324 | 5.07e-47 | 162 |
| MS.gene85260.t1 | MTR_3g105790 | 38.956 | 249 | 143 | 4 | 88 | 332 | 3 | 246 | 7.72e-47 | 159 |
| MS.gene85260.t1 | MTR_1g009750 | 30.473 | 338 | 202 | 8 | 1 | 332 | 1 | 311 | 1.49e-46 | 160 |
| MS.gene85260.t1 | MTR_4g074980 | 32.326 | 331 | 182 | 9 | 7 | 332 | 1 | 294 | 3.04e-46 | 159 |
| MS.gene85260.t1 | MTR_2g008160 | 35.691 | 311 | 149 | 7 | 30 | 332 | 21 | 288 | 2.16e-44 | 154 |
| MS.gene85260.t1 | MTR_1g066380 | 33.846 | 260 | 161 | 4 | 77 | 332 | 3 | 255 | 2.03e-42 | 147 |
| MS.gene85260.t1 | MTR_5g074860 | 33.550 | 307 | 142 | 9 | 33 | 329 | 29 | 283 | 1.55e-40 | 144 |
| MS.gene85260.t1 | MTR_4g074980 | 34.940 | 249 | 149 | 6 | 7 | 250 | 1 | 241 | 6.11e-40 | 141 |
| MS.gene85260.t1 | MTR_2g008160 | 42.775 | 173 | 98 | 1 | 30 | 201 | 21 | 193 | 1.17e-36 | 131 |
| MS.gene85260.t1 | MTR_2g029880 | 34.518 | 197 | 110 | 3 | 140 | 332 | 7 | 188 | 4.18e-33 | 122 |
| MS.gene85260.t1 | MTR_2g078560 | 31.696 | 224 | 125 | 4 | 135 | 330 | 95 | 318 | 2.42e-31 | 120 |
| MS.gene85260.t1 | MTR_5g074700 | 32.051 | 234 | 129 | 8 | 105 | 333 | 7 | 215 | 5.79e-30 | 114 |
| MS.gene85260.t1 | MTR_2g077980 | 30.000 | 270 | 155 | 5 | 93 | 328 | 11 | 280 | 3.40e-29 | 114 |
| MS.gene85260.t1 | MTR_3g072210 | 31.472 | 197 | 117 | 6 | 141 | 332 | 55 | 238 | 2.70e-23 | 96.7 |
| MS.gene85260.t1 | MTR_5g058120 | 32.530 | 166 | 96 | 2 | 163 | 328 | 6 | 155 | 9.94e-23 | 95.5 |
| MS.gene85260.t1 | MTR_7g086790 | 32.653 | 196 | 106 | 6 | 80 | 273 | 17 | 188 | 1.85e-22 | 93.6 |
| MS.gene85260.t1 | MTR_3g072260 | 41.221 | 131 | 70 | 2 | 9 | 136 | 6 | 132 | 4.78e-20 | 85.5 |
| MS.gene85260.t1 | MTR_7g072490 | 29.365 | 252 | 107 | 7 | 79 | 325 | 2 | 187 | 1.83e-19 | 85.5 |
| MS.gene85260.t1 | MTR_6g048160 | 58.462 | 65 | 26 | 1 | 72 | 136 | 22 | 85 | 2.56e-18 | 79.0 |
| MS.gene85260.t1 | MTR_3g462850 | 33.548 | 155 | 83 | 8 | 188 | 332 | 5 | 149 | 7.10e-18 | 79.7 |
| MS.gene85260.t1 | MTR_4g114220 | 46.237 | 93 | 41 | 3 | 49 | 139 | 17 | 102 | 1.13e-16 | 76.3 |
| MS.gene85260.t1 | MTR_7g086810 | 33.913 | 115 | 53 | 1 | 33 | 147 | 6 | 97 | 6.79e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85260.t1 | AT5G24070 | 63.393 | 336 | 115 | 3 | 4 | 332 | 1 | 335 | 8.70e-158 | 445 |
| MS.gene85260.t1 | AT2G43480 | 65.677 | 303 | 101 | 2 | 32 | 332 | 34 | 335 | 1.03e-156 | 442 |
| MS.gene85260.t1 | AT5G22410 | 40.741 | 324 | 179 | 6 | 11 | 331 | 11 | 324 | 1.01e-74 | 233 |
| MS.gene85260.t1 | AT5G17820 | 40.594 | 303 | 166 | 3 | 32 | 332 | 23 | 313 | 1.59e-74 | 232 |
| MS.gene85260.t1 | AT3G03670 | 40.656 | 305 | 172 | 3 | 32 | 332 | 22 | 321 | 2.77e-73 | 229 |
| MS.gene85260.t1 | AT5G17820 | 40.594 | 303 | 166 | 3 | 32 | 332 | 76 | 366 | 4.08e-73 | 230 |
| MS.gene85260.t1 | AT5G06730 | 37.764 | 331 | 190 | 6 | 9 | 332 | 13 | 334 | 1.64e-71 | 226 |
| MS.gene85260.t1 | AT5G06720 | 37.386 | 329 | 190 | 6 | 11 | 332 | 14 | 333 | 2.78e-70 | 222 |
| MS.gene85260.t1 | AT5G15180 | 39.474 | 304 | 174 | 4 | 33 | 332 | 32 | 329 | 3.87e-70 | 221 |
| MS.gene85260.t1 | AT2G41480 | 42.345 | 307 | 163 | 6 | 33 | 332 | 29 | 328 | 5.06e-69 | 219 |
| MS.gene85260.t1 | AT1G34510 | 39.344 | 305 | 165 | 6 | 32 | 332 | 21 | 309 | 2.34e-68 | 216 |
| MS.gene85260.t1 | AT5G19880 | 40.000 | 335 | 168 | 10 | 12 | 332 | 14 | 329 | 8.05e-68 | 216 |
| MS.gene85260.t1 | AT5G51890 | 39.450 | 327 | 182 | 6 | 11 | 332 | 7 | 322 | 1.71e-67 | 214 |
| MS.gene85260.t1 | AT5G39580 | 39.815 | 324 | 186 | 6 | 11 | 332 | 3 | 319 | 2.12e-67 | 214 |
| MS.gene85260.t1 | AT5G66390 | 39.144 | 327 | 186 | 7 | 12 | 332 | 14 | 333 | 2.49e-67 | 214 |
| MS.gene85260.t1 | AT4G26010 | 39.016 | 305 | 168 | 5 | 32 | 333 | 21 | 310 | 3.63e-67 | 213 |
| MS.gene85260.t1 | AT1G05260 | 38.636 | 308 | 181 | 5 | 30 | 333 | 23 | 326 | 6.04e-67 | 213 |
| MS.gene85260.t1 | AT4G26010 | 39.016 | 305 | 168 | 5 | 32 | 333 | 49 | 338 | 9.48e-67 | 213 |
| MS.gene85260.t1 | AT4G11290 | 38.188 | 309 | 181 | 4 | 30 | 332 | 22 | 326 | 9.59e-67 | 213 |
| MS.gene85260.t1 | AT5G19890 | 37.879 | 330 | 184 | 8 | 11 | 333 | 13 | 328 | 1.58e-66 | 212 |
| MS.gene85260.t1 | AT5G42180 | 40.000 | 300 | 169 | 6 | 33 | 329 | 23 | 314 | 1.62e-66 | 212 |
| MS.gene85260.t1 | AT3G32980 | 37.461 | 323 | 185 | 7 | 20 | 333 | 21 | 335 | 8.95e-66 | 211 |
| MS.gene85260.t1 | AT5G64120 | 38.532 | 327 | 189 | 6 | 11 | 332 | 9 | 328 | 2.46e-65 | 209 |
| MS.gene85260.t1 | AT1G05240 | 37.582 | 306 | 179 | 4 | 33 | 332 | 26 | 325 | 3.63e-65 | 209 |
| MS.gene85260.t1 | AT1G05250 | 37.582 | 306 | 179 | 4 | 33 | 332 | 26 | 325 | 3.63e-65 | 209 |
| MS.gene85260.t1 | AT4G36430 | 36.196 | 326 | 193 | 6 | 13 | 332 | 14 | 330 | 4.74e-65 | 209 |
| MS.gene85260.t1 | AT3G50990 | 36.556 | 331 | 191 | 7 | 9 | 332 | 23 | 341 | 1.26e-64 | 208 |
| MS.gene85260.t1 | AT4G33870 | 35.455 | 330 | 179 | 4 | 33 | 328 | 68 | 397 | 1.77e-64 | 209 |
| MS.gene85260.t1 | AT3G01190 | 38.188 | 309 | 183 | 3 | 26 | 332 | 19 | 321 | 1.12e-63 | 205 |
| MS.gene85260.t1 | AT2G18140 | 35.484 | 341 | 207 | 8 | 1 | 333 | 1 | 336 | 1.63e-63 | 205 |
| MS.gene85260.t1 | AT3G21770 | 36.393 | 305 | 186 | 4 | 28 | 328 | 24 | 324 | 4.82e-63 | 203 |
| MS.gene85260.t1 | AT3G49110 | 36.747 | 332 | 192 | 8 | 11 | 333 | 15 | 337 | 1.21e-62 | 203 |
| MS.gene85260.t1 | AT2G39040 | 40.453 | 309 | 173 | 7 | 32 | 332 | 45 | 350 | 1.46e-62 | 203 |
| MS.gene85260.t1 | AT1G30870 | 40.328 | 305 | 167 | 6 | 33 | 332 | 51 | 345 | 2.82e-62 | 202 |
| MS.gene85260.t1 | AT2G18150 | 35.224 | 335 | 200 | 8 | 11 | 333 | 8 | 337 | 3.49e-62 | 201 |
| MS.gene85260.t1 | AT5G14130 | 34.431 | 334 | 194 | 7 | 10 | 332 | 11 | 330 | 4.68e-62 | 201 |
| MS.gene85260.t1 | AT3G49120 | 36.747 | 332 | 192 | 9 | 11 | 333 | 14 | 336 | 9.92e-62 | 201 |
| MS.gene85260.t1 | AT5G14130 | 34.431 | 334 | 194 | 7 | 10 | 332 | 52 | 371 | 1.75e-61 | 201 |
| MS.gene85260.t1 | AT1G68850 | 34.503 | 342 | 207 | 8 | 1 | 332 | 1 | 335 | 3.99e-61 | 199 |
| MS.gene85260.t1 | AT2G24800 | 37.419 | 310 | 175 | 6 | 32 | 332 | 30 | 329 | 1.01e-60 | 197 |
| MS.gene85260.t1 | AT4G31760 | 35.294 | 306 | 186 | 5 | 32 | 332 | 28 | 326 | 9.28e-60 | 195 |
| MS.gene85260.t1 | AT5G05340 | 34.839 | 310 | 183 | 5 | 30 | 332 | 27 | 324 | 2.43e-59 | 194 |
| MS.gene85260.t1 | AT2G38380 | 35.366 | 328 | 193 | 7 | 16 | 332 | 14 | 333 | 2.69e-59 | 194 |
| MS.gene85260.t1 | AT5G64110 | 37.705 | 305 | 181 | 3 | 31 | 332 | 32 | 330 | 1.30e-58 | 192 |
| MS.gene85260.t1 | AT1G14550 | 36.013 | 311 | 179 | 6 | 30 | 332 | 23 | 321 | 2.06e-58 | 191 |
| MS.gene85260.t1 | AT5G58400 | 36.615 | 325 | 189 | 6 | 14 | 332 | 12 | 325 | 2.38e-58 | 191 |
| MS.gene85260.t1 | AT2G22420 | 35.621 | 306 | 184 | 5 | 33 | 333 | 23 | 320 | 3.39e-58 | 191 |
| MS.gene85260.t1 | AT4G08770 | 39.362 | 282 | 157 | 7 | 60 | 332 | 51 | 327 | 5.60e-58 | 191 |
| MS.gene85260.t1 | AT2G38390 | 35.385 | 325 | 197 | 6 | 16 | 332 | 14 | 333 | 7.27e-58 | 191 |
| MS.gene85260.t1 | AT1G49570 | 37.255 | 306 | 181 | 6 | 32 | 330 | 47 | 348 | 1.02e-57 | 190 |
| MS.gene85260.t1 | AT2G18980 | 34.462 | 325 | 200 | 6 | 14 | 332 | 6 | 323 | 1.65e-57 | 189 |
| MS.gene85260.t1 | AT4G37530 | 35.410 | 305 | 184 | 5 | 32 | 328 | 26 | 325 | 7.03e-57 | 187 |
| MS.gene85260.t1 | AT5G64100 | 38.127 | 299 | 172 | 5 | 38 | 332 | 42 | 331 | 7.18e-57 | 187 |
| MS.gene85260.t1 | AT4G25980 | 35.030 | 334 | 196 | 4 | 5 | 332 | 8 | 326 | 7.29e-57 | 187 |
| MS.gene85260.t1 | AT4G21960 | 35.015 | 337 | 198 | 6 | 4 | 333 | 6 | 328 | 2.17e-56 | 186 |
| MS.gene85260.t1 | AT1G14540 | 35.583 | 326 | 188 | 8 | 13 | 332 | 6 | 315 | 2.25e-56 | 186 |
| MS.gene85260.t1 | AT1G44970 | 34.604 | 341 | 206 | 6 | 4 | 332 | 11 | 346 | 3.74e-56 | 186 |
| MS.gene85260.t1 | AT1G71695 | 33.968 | 315 | 185 | 9 | 28 | 332 | 38 | 339 | 4.40e-56 | 186 |
| MS.gene85260.t1 | AT4G08780 | 36.452 | 310 | 183 | 7 | 32 | 332 | 23 | 327 | 7.02e-56 | 185 |
| MS.gene85260.t1 | AT5G58390 | 34.921 | 315 | 185 | 5 | 26 | 332 | 14 | 316 | 9.59e-56 | 184 |
| MS.gene85260.t1 | AT2G35380 | 35.905 | 337 | 196 | 9 | 7 | 332 | 8 | 335 | 1.22e-55 | 184 |
| MS.gene85260.t1 | AT4G33420 | 36.634 | 303 | 175 | 4 | 33 | 332 | 37 | 325 | 1.06e-54 | 182 |
| MS.gene85260.t1 | AT4G30170 | 34.528 | 307 | 188 | 6 | 32 | 332 | 26 | 325 | 2.19e-54 | 181 |
| MS.gene85260.t1 | AT4G33420 | 36.634 | 303 | 175 | 4 | 33 | 332 | 84 | 372 | 3.30e-54 | 182 |
| MS.gene85260.t1 | AT4G37520 | 35.082 | 305 | 185 | 5 | 32 | 328 | 26 | 325 | 3.43e-54 | 181 |
| MS.gene85260.t1 | AT2G34060 | 35.783 | 313 | 186 | 7 | 28 | 329 | 35 | 343 | 2.56e-53 | 179 |
| MS.gene85260.t1 | AT4G16270 | 38.562 | 306 | 175 | 7 | 33 | 332 | 50 | 348 | 3.84e-53 | 178 |
| MS.gene85260.t1 | AT4G17690 | 35.350 | 314 | 186 | 7 | 27 | 333 | 20 | 323 | 2.32e-52 | 176 |
| MS.gene85260.t1 | AT1G77100 | 34.821 | 336 | 195 | 8 | 4 | 332 | 1 | 319 | 3.05e-52 | 175 |
| MS.gene85260.t1 | AT3G17070 | 33.444 | 302 | 191 | 4 | 33 | 328 | 38 | 335 | 4.02e-52 | 175 |
| MS.gene85260.t1 | AT4G37520 | 35.082 | 305 | 182 | 6 | 32 | 328 | 26 | 322 | 5.16e-52 | 175 |
| MS.gene85260.t1 | AT5G67400 | 32.923 | 325 | 205 | 5 | 12 | 328 | 6 | 325 | 6.40e-51 | 172 |
| MS.gene85260.t1 | AT3G49960 | 33.443 | 305 | 190 | 5 | 32 | 328 | 26 | 325 | 1.92e-50 | 171 |
| MS.gene85260.t1 | AT2G37130 | 32.353 | 306 | 195 | 5 | 32 | 332 | 29 | 327 | 2.38e-48 | 165 |
| MS.gene85260.t1 | AT5G47000 | 33.435 | 329 | 203 | 7 | 10 | 332 | 12 | 330 | 5.76e-48 | 164 |
| MS.gene85260.t1 | AT2G37130 | 32.450 | 302 | 192 | 5 | 36 | 332 | 2 | 296 | 1.52e-47 | 162 |
| MS.gene85260.t1 | AT4G37530 | 36.782 | 261 | 151 | 6 | 32 | 284 | 26 | 280 | 4.55e-47 | 160 |
| MS.gene85260.t1 | AT1G24110 | 34.146 | 328 | 190 | 10 | 20 | 332 | 6 | 322 | 2.46e-45 | 157 |
| MS.gene85260.t1 | AT3G17070 | 33.846 | 260 | 161 | 5 | 75 | 328 | 18 | 272 | 1.28e-42 | 149 |
| MS.gene85260.t1 | AT2G35380 | 36.145 | 249 | 145 | 6 | 93 | 332 | 4 | 247 | 7.56e-41 | 143 |
| MS.gene85260.t1 | AT5G40150 | 31.511 | 311 | 198 | 5 | 28 | 332 | 27 | 328 | 1.05e-40 | 145 |
| MS.gene85260.t1 | AT3G28200 | 30.744 | 309 | 198 | 5 | 30 | 332 | 18 | 316 | 3.56e-40 | 144 |
| MS.gene85260.t1 | AT2G24800 | 43.902 | 164 | 89 | 2 | 32 | 193 | 30 | 192 | 7.73e-39 | 138 |
| MS.gene85260.t1 | AT5G39580 | 40.404 | 198 | 112 | 3 | 38 | 230 | 30 | 226 | 1.80e-36 | 131 |
| MS.gene85260.t1 | AT4G25980 | 34.934 | 229 | 139 | 3 | 13 | 235 | 55 | 279 | 2.68e-35 | 130 |
| MS.gene85260.t1 | AT3G42570 | 34.653 | 101 | 63 | 2 | 98 | 195 | 49 | 149 | 1.54e-11 | 62.0 |
Find 77 sgRNAs with CRISPR-Local
Find 139 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGTCCTTTCTTTGTTCT+TGG | 0.141769 | 2.4:+4888203 | None:intergenic |
| TGCTCAATCCATGTTCAAAA+TGG | 0.176494 | 2.4:-4887997 | MS.gene85260:CDS |
| ATCGATCAACAATTACTATT+TGG | 0.229792 | 2.4:-4888083 | MS.gene85260:CDS |
| TCAGAGAATCATACTATAAA+AGG | 0.256963 | 2.4:-4888133 | MS.gene85260:CDS |
| TTTGTCCTTTCTTTGTTCTT+GGG | 0.285365 | 2.4:+4888204 | None:intergenic |
| TCCTTTCTTCCTGTGAAAAC+TGG | 0.305455 | 2.4:+4888552 | None:intergenic |
| TGCCATTGCAACTTTGGCTT+TGG | 0.331079 | 2.4:+4889423 | None:intergenic |
| AGCTAGGGATGCTGCTAAAA+TGG | 0.333172 | 2.4:-4888714 | MS.gene85260:intron |
| TTAGATATGACAACACTCTT+AGG | 0.336759 | 2.4:-4888432 | MS.gene85260:intron |
| TGACAGGATCAAAACTGTTC+TGG | 0.348274 | 2.4:-4888786 | MS.gene85260:CDS |
| TCAGCGCAGGAGACAATTCC+AGG | 0.375749 | 2.4:+4888752 | None:intergenic |
| GCTCAATCCATGTTCAAAAT+GGG | 0.411312 | 2.4:-4887996 | MS.gene85260:CDS |
| CCTGCGCAATGAAGCTGTCC+TGG | 0.413855 | 2.4:-4888108 | MS.gene85260:CDS |
| CTCTAGCATACTTTAAATCA+AGG | 0.418727 | 2.4:-4888467 | MS.gene85260:CDS |
| GGCACCAAGTGAAGATTCAT+TGG | 0.421423 | 2.4:-4889359 | MS.gene85260:CDS |
| CTGTATAATTACAATGGTAC+TGG | 0.433726 | 2.4:-4888284 | MS.gene85260:CDS |
| TTGTCCTTTCTTTGTTCTTG+GGG | 0.443827 | 2.4:+4888205 | None:intergenic |
| GAGGATTTGTACTAATTGAC+AGG | 0.450366 | 2.4:-4888802 | MS.gene85260:CDS |
| CGAAAAGTAGCATCCATGCT+TGG | 0.456509 | 2.4:+4888251 | None:intergenic |
| TGTCAACAGGCCGGTGCACC+AGG | 0.465657 | 2.4:-4888579 | MS.gene85260:intron |
| TACTGCCAAGTTACTACGCT+TGG | 0.479846 | 2.4:-4889319 | MS.gene85260:CDS |
| GAAAAGTAGCATCCATGCTT+GGG | 0.480736 | 2.4:+4888252 | None:intergenic |
| TAGTGATGCCATTGCAACTT+TGG | 0.483722 | 2.4:+4889417 | None:intergenic |
| GTAATTGTTGATCGATTCCC+AGG | 0.485944 | 2.4:+4888090 | None:intergenic |
| ACTGCAAAAGCTATTATTAG+TGG | 0.486300 | 2.4:+4889480 | None:intergenic |
| ATCACCGAGGAATTTGCTGC+TGG | 0.488175 | 2.4:-4888044 | MS.gene85260:CDS |
| CAATGTGGCTACAATGTGTT+TGG | 0.492341 | 2.4:+4888315 | None:intergenic |
| GTAAACCAAGCGTAGTAACT+TGG | 0.512999 | 2.4:+4889314 | None:intergenic |
| CCAGGACAGCTTCATTGCGC+AGG | 0.514985 | 2.4:+4888108 | None:intergenic |
| TATACTCCATCTTGCAGCTA+GGG | 0.522742 | 2.4:-4888729 | MS.gene85260:CDS |
| ATCACCATCCATCTCATGGC+AGG | 0.525540 | 2.4:-4888493 | MS.gene85260:CDS |
| GTTCTGGAATCACGATGCCC+TGG | 0.534270 | 2.4:-4888770 | MS.gene85260:CDS |
| CTCCAAAGCCAAAGTTGCAA+TGG | 0.535232 | 2.4:-4889425 | MS.gene85260:CDS |
| TGTCCTTTCTTTGTTCTTGG+GGG | 0.541386 | 2.4:+4888206 | None:intergenic |
| ATATACTCCATCTTGCAGCT+AGG | 0.543161 | 2.4:-4888730 | MS.gene85260:CDS |
| CAGCATCCCTAGCTGCAAGA+TGG | 0.544061 | 2.4:+4888723 | None:intergenic |
| GTATACCTAAACCCAGACTC+TGG | 0.544857 | 2.4:-4888170 | MS.gene85260:CDS |
| GCACCAAGTGAAGATTCATT+GGG | 0.550917 | 2.4:-4889358 | MS.gene85260:CDS |
| AACTGGATAACCTGGTGCAC+CGG | 0.552419 | 2.4:+4888569 | None:intergenic |
| CTGCGCAATGAAGCTGTCCT+GGG | 0.555200 | 2.4:-4888107 | MS.gene85260:CDS |
| GATCCCAATGAATCTTCACT+TGG | 0.555493 | 2.4:+4889355 | None:intergenic |
| ATTGTAGCCACATTGTTGAC+AGG | 0.555596 | 2.4:-4888307 | MS.gene85260:CDS |
| CTGCAAAAGCTATTATTAGT+GGG | 0.556067 | 2.4:+4889481 | None:intergenic |
| AATGGGTAGACTTATGTATG+TGG | 0.565516 | 2.4:-4889508 | MS.gene85260:CDS |
| AATGAATCTTCACTTGGTGC+CGG | 0.566211 | 2.4:+4889361 | None:intergenic |
| GCAGTGTTGAGCTTGTGCCA+TGG | 0.566470 | 2.4:-4889462 | MS.gene85260:CDS |
| GAAAGGACAAAGCGACCCAC+TGG | 0.567433 | 2.4:-4888192 | MS.gene85260:CDS |
| CCTGTGAAAACTGGATAACC+TGG | 0.572521 | 2.4:+4888561 | None:intergenic |
| TGCCATCACCATCCATCTCA+TGG | 0.573493 | 2.4:-4888497 | MS.gene85260:CDS |
| TCTAGCATACTTTAAATCAA+GGG | 0.578417 | 2.4:-4888466 | MS.gene85260:CDS |
| GAAATCAAGGAGAGGTACGC+CGG | 0.584932 | 2.4:-4887953 | MS.gene85260:CDS |
| ATACTTTAAATCAAGGGGAC+TGG | 0.589178 | 2.4:-4888460 | MS.gene85260:CDS |
| GTACAAATCCTCCAAGCCCC+CGG | 0.589926 | 2.4:+4888813 | None:intergenic |
| GCGACGCAGAGGTGTATGTC+CGG | 0.597008 | 2.4:-4889380 | MS.gene85260:CDS |
| GCATCAATACTGCTTGATGA+AGG | 0.603718 | 2.4:-4888866 | MS.gene85260:CDS |
| ATGAGATGGATGGTGATGGC+AGG | 0.611656 | 2.4:+4888499 | None:intergenic |
| CTAGCATACTTTAAATCAAG+GGG | 0.615884 | 2.4:-4888465 | MS.gene85260:CDS |
| AAATCCAGCAGCAAATTCCT+CGG | 0.621559 | 2.4:+4888040 | None:intergenic |
| AACACAGGAGCACACACACT+AGG | 0.622191 | 2.4:-4888338 | MS.gene85260:intron |
| TGGAAACTCAGACCCAAGCA+TGG | 0.631385 | 2.4:-4888264 | MS.gene85260:CDS |
| AAGATGGAGTATATCAGCGC+AGG | 0.632332 | 2.4:+4888739 | None:intergenic |
| AAAAGAGCACCACAGAACCG+GGG | 0.634192 | 2.4:-4888830 | MS.gene85260:CDS |
| CAATGTATGCCGCGACGCAG+AGG | 0.638012 | 2.4:-4889391 | MS.gene85260:CDS |
| TGCCATGAGATGGATGGTGA+TGG | 0.640627 | 2.4:+4888495 | None:intergenic |
| TAGAGATTCCTGCCATGAGA+TGG | 0.641062 | 2.4:+4888485 | None:intergenic |
| GACAGGCTGTATAATTACAA+TGG | 0.641447 | 2.4:-4888290 | MS.gene85260:CDS |
| ACATACATTGACAAAACAGT+CGG | 0.657112 | 2.4:+4889290 | None:intergenic |
| AAAGAGCACCACAGAACCGG+GGG | 0.661332 | 2.4:-4888829 | MS.gene85260:CDS |
| TTTAACAGGAAATCAAGGAG+AGG | 0.672719 | 2.4:-4887961 | MS.gene85260:CDS |
| CAGCGCAGGAGACAATTCCA+GGG | 0.677474 | 2.4:+4888753 | None:intergenic |
| GATTCCTGCCATGAGATGGA+TGG | 0.684323 | 2.4:+4888489 | None:intergenic |
| TATTTGTGTATCGACAACTC+CGG | 0.685062 | 2.4:+4887934 | None:intergenic |
| CTGGGTTTAGGTATACCAGT+GGG | 0.687353 | 2.4:+4888177 | None:intergenic |
| TCTGGGTTTAGGTATACCAG+TGG | 0.695699 | 2.4:+4888176 | None:intergenic |
| TATACAGCCTGTCAACAATG+TGG | 0.699068 | 2.4:+4888300 | None:intergenic |
| GGACATACACCTCTGCGTCG+CGG | 0.704072 | 2.4:+4889382 | None:intergenic |
| TGACACTAAAGAGATCACCG+AGG | 0.845599 | 2.4:-4888057 | MS.gene85260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATAAAATAAAATAAAA+TGG | + | chr2.4:4888174-4888193 | None:intergenic | 0.0% |
| !! | ATTATAAAATAAAATAAAAT+GGG | + | chr2.4:4888173-4888192 | None:intergenic | 0.0% |
| !!! | TTTTATTTTATTTTATAATT+TGG | - | chr2.4:4888174-4888193 | MS.gene85260:CDS | 0.0% |
| !! | TTCATTTATAATGTTTAGAA+TGG | + | chr2.4:4888489-4888508 | None:intergenic | 15.0% |
| !! | ACTCTATATACTAAGTTAAA+TGG | + | chr2.4:4888429-4888448 | None:intergenic | 20.0% |
| !! | TAGCTTAAAAAGTTGAAAAA+TGG | + | chr2.4:4888223-4888242 | None:intergenic | 20.0% |
| !!! | AAAATTTTAACAGGAAATCA+AGG | - | chr2.4:4889470-4889489 | MS.gene85260:CDS | 20.0% |
| !!! | GAATATATTTTAGTTTCAGA+GGG | + | chr2.4:4888338-4888357 | None:intergenic | 20.0% |
| !!! | GGAAATATCAAAATTTTAAC+AGG | - | chr2.4:4889461-4889480 | MS.gene85260:CDS | 20.0% |
| !!! | TGAATATATTTTAGTTTCAG+AGG | + | chr2.4:4888339-4888358 | None:intergenic | 20.0% |
| !!! | TTGAGATAAGATTTTATTTG+CGG | + | chr2.4:4888792-4888811 | None:intergenic | 20.0% |
| !!! | TTTAGAATGGTAAGTTTAAA+TGG | + | chr2.4:4888476-4888495 | None:intergenic | 20.0% |
| ! | ATAAAATCTTATCTCAAGGT+AGG | - | chr2.4:4888795-4888814 | MS.gene85260:CDS | 25.0% |
| ! | ATCGATCAACAATTACTATT+TGG | - | chr2.4:4889353-4889372 | MS.gene85260:CDS | 25.0% |
| ! | ATTTGAGAATTAATGTCAAC+AGG | - | chr2.4:4888844-4888863 | MS.gene85260:CDS | 25.0% |
| ! | GCAAATAAAATCTTATCTCA+AGG | - | chr2.4:4888791-4888810 | MS.gene85260:CDS | 25.0% |
| ! | GTTGACATTAATTCTCAAAT+CGG | + | chr2.4:4888844-4888863 | None:intergenic | 25.0% |
| ! | TAAAATCTTATCTCAAGGTA+GGG | - | chr2.4:4888796-4888815 | MS.gene85260:CDS | 25.0% |
| ! | TCAGAGAATCATACTATAAA+AGG | - | chr2.4:4889303-4889322 | MS.gene85260:CDS | 25.0% |
| ! | TCTAGCATACTTTAAATCAA+GGG | - | chr2.4:4888970-4888989 | MS.gene85260:intron | 25.0% |
| !! | ACCAACAATATGTTCTAAAT+GGG | - | chr2.4:4889060-4889079 | MS.gene85260:intron | 25.0% |
| !! | TACCAACAATATGTTCTAAA+TGG | - | chr2.4:4889059-4889078 | MS.gene85260:intron | 25.0% |
| AAAATCTTATCTCAAGGTAG+GGG | - | chr2.4:4888797-4888816 | MS.gene85260:CDS | 30.0% | |
| ACATACATTGACAAAACAGT+CGG | + | chr2.4:4888149-4888168 | None:intergenic | 30.0% | |
| ACTGCAAAAGCTATTATTAG+TGG | + | chr2.4:4887959-4887978 | None:intergenic | 30.0% | |
| ATAGGACTATGAACAACTAA+AGG | - | chr2.4:4888291-4888310 | MS.gene85260:CDS | 30.0% | |
| CTAGCATACTTTAAATCAAG+GGG | - | chr2.4:4888971-4888990 | MS.gene85260:intron | 30.0% | |
| CTCTAGCATACTTTAAATCA+AGG | - | chr2.4:4888969-4888988 | MS.gene85260:intron | 30.0% | |
| CTGCAAAAGCTATTATTAGT+GGG | + | chr2.4:4887958-4887977 | None:intergenic | 30.0% | |
| CTGTATAATTACAATGGTAC+TGG | - | chr2.4:4889152-4889171 | MS.gene85260:intron | 30.0% | |
| CTTAGTATATAGAGTTCATG+AGG | - | chr2.4:4888434-4888453 | MS.gene85260:CDS | 30.0% | |
| TAAGAAAGATACAAACTGTG+AGG | - | chr2.4:4888241-4888260 | MS.gene85260:CDS | 30.0% | |
| TTAGATATGACAACACTCTT+AGG | - | chr2.4:4889004-4889023 | MS.gene85260:intron | 30.0% | |
| TTTGTCCTTTCTTTGTTCTT+GGG | + | chr2.4:4889235-4889254 | None:intergenic | 30.0% | |
| ! | AAACTTAAATCGTTGTTTCG+TGG | - | chr2.4:4888533-4888552 | MS.gene85260:CDS | 30.0% |
| ! | ACCCATTTAGAACATATTGT+TGG | + | chr2.4:4889064-4889083 | None:intergenic | 30.0% |
| ! | GAAACAACGATTTAAGTTTC+AGG | + | chr2.4:4888532-4888551 | None:intergenic | 30.0% |
| ! | GATATTTCCCATTTTGAACA+TGG | + | chr2.4:4889450-4889469 | None:intergenic | 30.0% |
| !! | AGATAAGATTTTATTTGCGG+AGG | + | chr2.4:4888789-4888808 | None:intergenic | 30.0% |
| !! | ATAAGATTTTATTTGCGGAG+GGG | + | chr2.4:4888787-4888806 | None:intergenic | 30.0% |
| !! | GATAAGATTTTATTTGCGGA+GGG | + | chr2.4:4888788-4888807 | None:intergenic | 30.0% |
| ACTATGAACAACTAAAGGAC+AGG | - | chr2.4:4888296-4888315 | MS.gene85260:CDS | 35.0% | |
| ATACTTTAAATCAAGGGGAC+TGG | - | chr2.4:4888976-4888995 | MS.gene85260:intron | 35.0% | |
| CTTTGTCCTTTCTTTGTTCT+TGG | + | chr2.4:4889236-4889255 | None:intergenic | 35.0% | |
| GACAGGCTGTATAATTACAA+TGG | - | chr2.4:4889146-4889165 | MS.gene85260:intron | 35.0% | |
| GAGGATTTGTACTAATTGAC+AGG | - | chr2.4:4888634-4888653 | MS.gene85260:intron | 35.0% | |
| GATACAAACTGTGAGGTTAA+TGG | - | chr2.4:4888248-4888267 | MS.gene85260:CDS | 35.0% | |
| GCTCAATCCATGTTCAAAAT+GGG | - | chr2.4:4889440-4889459 | MS.gene85260:CDS | 35.0% | |
| TATGACAACACTCTTAGGTA+AGG | - | chr2.4:4889009-4889028 | MS.gene85260:intron | 35.0% | |
| TGCATGTTTCATATCAACAC+AGG | - | chr2.4:4889083-4889102 | MS.gene85260:intron | 35.0% | |
| TGCTCAATCCATGTTCAAAA+TGG | - | chr2.4:4889439-4889458 | MS.gene85260:CDS | 35.0% | |
| TTGTCCTTTCTTTGTTCTTG+GGG | + | chr2.4:4889234-4889253 | None:intergenic | 35.0% | |
| TTTAACAGGAAATCAAGGAG+AGG | - | chr2.4:4889475-4889494 | MS.gene85260:CDS | 35.0% | |
| ! | AATGGTTGAAGGGAACTTTT+AGG | - | chr2.4:4888266-4888285 | MS.gene85260:CDS | 35.0% |
| ! | ATGTAATCTTTTCCAGAGTC+TGG | + | chr2.4:4889281-4889300 | None:intergenic | 35.0% |
| ! | CTGCTGGATTTGAAGATTTT+AGG | - | chr2.4:4889408-4889427 | MS.gene85260:CDS | 35.0% |
| ! | GTTCATGAGGTTTAAAGCAT+AGG | - | chr2.4:4888447-4888466 | MS.gene85260:CDS | 35.0% |
| ! | TATTTGTGTATCGACAACTC+CGG | + | chr2.4:4889505-4889524 | None:intergenic | 35.0% |
| ! | TGTAATCTTTTCCAGAGTCT+GGG | + | chr2.4:4889280-4889299 | None:intergenic | 35.0% |
| !! | GAAGGGAACTTTTAGGTAAT+AGG | - | chr2.4:4888273-4888292 | MS.gene85260:CDS | 35.0% |
| !! | TACTTTTCGAGACACATTGA+GGG | - | chr2.4:4889199-4889218 | MS.gene85260:intron | 35.0% |
| AAATCCAGCAGCAAATTCCT+CGG | + | chr2.4:4889399-4889418 | None:intergenic | 40.0% | |
| ACTGTGAGGTTAATGGTTGA+AGG | - | chr2.4:4888255-4888274 | MS.gene85260:CDS | 40.0% | |
| ATATACTCCATCTTGCAGCT+AGG | - | chr2.4:4888706-4888725 | MS.gene85260:intron | 40.0% | |
| ATTGTAGCCACATTGTTGAC+AGG | - | chr2.4:4889129-4889148 | MS.gene85260:intron | 40.0% | |
| CAATGTGGCTACAATGTGTT+TGG | + | chr2.4:4889124-4889143 | None:intergenic | 40.0% | |
| CTGTGAGGTTAATGGTTGAA+GGG | - | chr2.4:4888256-4888275 | MS.gene85260:CDS | 40.0% | |
| GAAAAGTAGCATCCATGCTT+GGG | + | chr2.4:4889187-4889206 | None:intergenic | 40.0% | |
| GAGAATTAATGTCAACAGGC+CGG | - | chr2.4:4888848-4888867 | MS.gene85260:CDS | 40.0% | |
| GATCCCAATGAATCTTCACT+TGG | + | chr2.4:4888084-4888103 | None:intergenic | 40.0% | |
| GCACCAAGTGAAGATTCATT+GGG | - | chr2.4:4888078-4888097 | MS.gene85260:CDS | 40.0% | |
| GCATCAATACTGCTTGATGA+AGG | - | chr2.4:4888570-4888589 | MS.gene85260:CDS | 40.0% | |
| GTAAACCAAGCGTAGTAACT+TGG | + | chr2.4:4888125-4888144 | None:intergenic | 40.0% | |
| TAGTGATGCCATTGCAACTT+TGG | + | chr2.4:4888022-4888041 | None:intergenic | 40.0% | |
| TATACAGCCTGTCAACAATG+TGG | + | chr2.4:4889139-4889158 | None:intergenic | 40.0% | |
| TATACTCCATCTTGCAGCTA+GGG | - | chr2.4:4888707-4888726 | MS.gene85260:intron | 40.0% | |
| TCCTTTCTTCCTGTGAAAAC+TGG | + | chr2.4:4888887-4888906 | None:intergenic | 40.0% | |
| TGACAGGATCAAAACTGTTC+TGG | - | chr2.4:4888650-4888669 | MS.gene85260:intron | 40.0% | |
| TGTCCTTTCTTTGTTCTTGG+GGG | + | chr2.4:4889233-4889252 | None:intergenic | 40.0% | |
| ! | AAATCGTTGTTTCGTGGCAT+AGG | - | chr2.4:4888539-4888558 | MS.gene85260:CDS | 40.0% |
| ! | AATCGTTGTTTCGTGGCATA+GGG | - | chr2.4:4888540-4888559 | MS.gene85260:CDS | 40.0% |
| ! | GTAATTGTTGATCGATTCCC+AGG | + | chr2.4:4889349-4889368 | None:intergenic | 40.0% |
| ! | GTTTTCACAGGAAGAAAGGA+TGG | - | chr2.4:4888887-4888906 | MS.gene85260:intron | 40.0% |
| ! | TCCAGTTTTCACAGGAAGAA+AGG | - | chr2.4:4888883-4888902 | MS.gene85260:intron | 40.0% |
| !! | AAAAAAGAGCACCACAGAAC+CGG | - | chr2.4:4888604-4888623 | MS.gene85260:intron | 40.0% |
| !! | AATGAATCTTCACTTGGTGC+CGG | + | chr2.4:4888078-4888097 | None:intergenic | 40.0% |
| !! | ACTTTTCGAGACACATTGAG+GGG | - | chr2.4:4889200-4889219 | MS.gene85260:intron | 40.0% |
| !! | CTACTTTTCGAGACACATTG+AGG | - | chr2.4:4889198-4889217 | MS.gene85260:intron | 40.0% |
| !!! | GGTGCTCTTTTTTCTGGATT+TGG | + | chr2.4:4888597-4888616 | None:intergenic | 40.0% |
| !!! | TTCTGTGGTGCTCTTTTTTC+TGG | + | chr2.4:4888603-4888622 | None:intergenic | 40.0% |
| AAGATGGAGTATATCAGCGC+AGG | + | chr2.4:4888700-4888719 | None:intergenic | 45.0% | |
| AGCTAGGGATGCTGCTAAAA+TGG | - | chr2.4:4888722-4888741 | MS.gene85260:CDS | 45.0% | |
| CCTGTGAAAACTGGATAACC+TGG | + | chr2.4:4888878-4888897 | None:intergenic | 45.0% | |
| CGAAAAGTAGCATCCATGCT+TGG | + | chr2.4:4889188-4889207 | None:intergenic | 45.0% | |
| CTCCAAAGCCAAAGTTGCAA+TGG | - | chr2.4:4888011-4888030 | MS.gene85260:CDS | 45.0% | |
| CTGGGTTTAGGTATACCAGT+GGG | + | chr2.4:4889262-4889281 | None:intergenic | 45.0% | |
| GGCACCAAGTGAAGATTCAT+TGG | - | chr2.4:4888077-4888096 | MS.gene85260:CDS | 45.0% | |
| GTATACCTAAACCCAGACTC+TGG | - | chr2.4:4889266-4889285 | MS.gene85260:intron | 45.0% | |
| TACTGCCAAGTTACTACGCT+TGG | - | chr2.4:4888117-4888136 | MS.gene85260:CDS | 45.0% | |
| TAGAGATTCCTGCCATGAGA+TGG | + | chr2.4:4888954-4888973 | None:intergenic | 45.0% | |
| TCTGGGTTTAGGTATACCAG+TGG | + | chr2.4:4889263-4889282 | None:intergenic | 45.0% | |
| TGACACTAAAGAGATCACCG+AGG | - | chr2.4:4889379-4889398 | MS.gene85260:CDS | 45.0% | |
| TGTCCCCCAAGAACAAAGAA+AGG | - | chr2.4:4889227-4889246 | MS.gene85260:intron | 45.0% | |
| ! | CCAGGTTATCCAGTTTTCAC+AGG | - | chr2.4:4888875-4888894 | MS.gene85260:CDS | 45.0% |
| ! | CTTTTCCAGAGTCTGGGTTT+AGG | + | chr2.4:4889274-4889293 | None:intergenic | 45.0% |
| ! | TGCCATTGCAACTTTGGCTT+TGG | + | chr2.4:4888016-4888035 | None:intergenic | 45.0% |
| !! | AAAAAGAGCACCACAGAACC+GGG | - | chr2.4:4888605-4888624 | MS.gene85260:intron | 45.0% |
| !! | TTATAAAATAAAATAAAATG+GGG | + | chr2.4:4888172-4888191 | None:intergenic | 5.0% |
| AACTGGATAACCTGGTGCAC+CGG | + | chr2.4:4888870-4888889 | None:intergenic | 50.0% | |
| ATCACCATCCATCTCATGGC+AGG | - | chr2.4:4888943-4888962 | MS.gene85260:intron | 50.0% | |
| ATTTGCGGAGGGGATACTGA+AGG | + | chr2.4:4888777-4888796 | None:intergenic | 50.0% | |
| GATTCCTGCCATGAGATGGA+TGG | + | chr2.4:4888950-4888969 | None:intergenic | 50.0% | |
| TGCCATCACCATCCATCTCA+TGG | - | chr2.4:4888939-4888958 | MS.gene85260:intron | 50.0% | |
| TGCCATGAGATGGATGGTGA+TGG | + | chr2.4:4888944-4888963 | None:intergenic | 50.0% | |
| TGGAAACTCAGACCCAAGCA+TGG | - | chr2.4:4889172-4889191 | MS.gene85260:intron | 50.0% | |
| ! | AACACAGGAGCACACACACT+AGG | - | chr2.4:4889098-4889117 | MS.gene85260:intron | 50.0% |
| ! | GAAATCAAGGAGAGGTACGC+CGG | - | chr2.4:4889483-4889502 | MS.gene85260:CDS | 50.0% |
| !! | AAAAGAGCACCACAGAACCG+GGG | - | chr2.4:4888606-4888625 | MS.gene85260:intron | 50.0% |
| !! | ATCACCGAGGAATTTGCTGC+TGG | - | chr2.4:4889392-4889411 | MS.gene85260:CDS | 50.0% |
| !! | ATGAGATGGATGGTGATGGC+AGG | + | chr2.4:4888940-4888959 | None:intergenic | 50.0% |
| CAGCATCCCTAGCTGCAAGA+TGG | + | chr2.4:4888716-4888735 | None:intergenic | 55.0% | |
| CAGCGCAGGAGACAATTCCA+GGG | + | chr2.4:4888686-4888705 | None:intergenic | 55.0% | |
| CTGCGCAATGAAGCTGTCCT+GGG | - | chr2.4:4889329-4889348 | MS.gene85260:CDS | 55.0% | |
| GAAAGGACAAAGCGACCCAC+TGG | - | chr2.4:4889244-4889263 | MS.gene85260:intron | 55.0% | |
| GTACAAATCCTCCAAGCCCC+CGG | + | chr2.4:4888626-4888645 | None:intergenic | 55.0% | |
| TCAGCGCAGGAGACAATTCC+AGG | + | chr2.4:4888687-4888706 | None:intergenic | 55.0% | |
| ! | GCAGTGTTGAGCTTGTGCCA+TGG | - | chr2.4:4887974-4887993 | MS.gene85260:CDS | 55.0% |
| !! | AAAGAGCACCACAGAACCGG+GGG | - | chr2.4:4888607-4888626 | MS.gene85260:intron | 55.0% |
| !! | GTTCTGGAATCACGATGCCC+TGG | - | chr2.4:4888666-4888685 | MS.gene85260:intron | 55.0% |
| CAATGTATGCCGCGACGCAG+AGG | - | chr2.4:4888045-4888064 | MS.gene85260:CDS | 60.0% | |
| CCAGGACAGCTTCATTGCGC+AGG | + | chr2.4:4889331-4889350 | None:intergenic | 60.0% | |
| CCTGCGCAATGAAGCTGTCC+TGG | - | chr2.4:4889328-4889347 | MS.gene85260:CDS | 60.0% | |
| GGACATACACCTCTGCGTCG+CGG | + | chr2.4:4888057-4888076 | None:intergenic | 60.0% | |
| ! | GCGACGCAGAGGTGTATGTC+CGG | - | chr2.4:4888056-4888075 | MS.gene85260:CDS | 60.0% |
| GAGCTGCTGCTGCTGCTCCA+TGG | + | chr2.4:4887994-4888013 | None:intergenic | 65.0% | |
| TGTCAACAGGCCGGTGCACC+AGG | - | chr2.4:4888857-4888876 | MS.gene85260:CDS | 65.0% | |
| CCACAGAACCGGGGGCTTGG+AGG | - | chr2.4:4888615-4888634 | MS.gene85260:intron | 70.0% | |
| CCTCCAAGCCCCCGGTTCTG+TGG | + | chr2.4:4888618-4888637 | None:intergenic | 70.0% | |
| GCACCACAGAACCGGGGGCT+TGG | - | chr2.4:4888612-4888631 | MS.gene85260:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 4887929 | 4889529 | 4887929 | ID=MS.gene85260 |
| chr2.4 | mRNA | 4887929 | 4889529 | 4887929 | ID=MS.gene85260.t1;Parent=MS.gene85260 |
| chr2.4 | exon | 4889296 | 4889529 | 4889296 | ID=MS.gene85260.t1.exon1;Parent=MS.gene85260.t1 |
| chr2.4 | CDS | 4889296 | 4889529 | 4889296 | ID=cds.MS.gene85260.t1;Parent=MS.gene85260.t1 |
| chr2.4 | exon | 4888715 | 4888897 | 4888715 | ID=MS.gene85260.t1.exon2;Parent=MS.gene85260.t1 |
| chr2.4 | CDS | 4888715 | 4888897 | 4888715 | ID=cds.MS.gene85260.t1;Parent=MS.gene85260.t1 |
| chr2.4 | exon | 4888433 | 4888592 | 4888433 | ID=MS.gene85260.t1.exon3;Parent=MS.gene85260.t1 |
| chr2.4 | CDS | 4888433 | 4888592 | 4888433 | ID=cds.MS.gene85260.t1;Parent=MS.gene85260.t1 |
| chr2.4 | exon | 4887929 | 4888353 | 4887929 | ID=MS.gene85260.t1.exon4;Parent=MS.gene85260.t1 |
| chr2.4 | CDS | 4887929 | 4888353 | 4887929 | ID=cds.MS.gene85260.t1;Parent=MS.gene85260.t1 |
| Gene Sequence |
| Protein sequence |
