Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87430.t1 | XP_003629468.2 | 97.7 | 473 | 7 | 1 | 1 | 469 | 1 | 473 | 4.20E-255 | 890.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87430.t1 | Q8L7A0 | 60.4 | 465 | 167 | 5 | 15 | 464 | 13 | 475 | 5.9e-149 | 528.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87430.t1 | G7LEU1 | 97.7 | 473 | 7 | 1 | 1 | 469 | 1 | 473 | 3.0e-255 | 890.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050438 | MS.gene87430 | 0.802752 | 4.83E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene87430 | 0.813171 | 2.93E-51 | -1.69E-46 |
| MS.gene050815 | MS.gene87430 | 0.818462 | 1.94E-52 | -1.69E-46 |
| MS.gene051265 | MS.gene87430 | 0.813614 | 2.34E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene87430 | 0.801526 | 8.64E-49 | -1.69E-46 |
| MS.gene05288 | MS.gene87430 | 0.81669 | 4.86E-52 | -1.69E-46 |
| MS.gene053074 | MS.gene87430 | 0.836307 | 1.01E-56 | -1.69E-46 |
| MS.gene053184 | MS.gene87430 | 0.803088 | 4.12E-49 | -1.69E-46 |
| MS.gene054184 | MS.gene87430 | 0.808605 | 2.85E-50 | -1.69E-46 |
| MS.gene054185 | MS.gene87430 | 0.804745 | 1.86E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene87430 | 0.859411 | 4.21E-63 | -1.69E-46 |
| MS.gene055608 | MS.gene87430 | 0.838147 | 3.42E-57 | -1.69E-46 |
| MS.gene055860 | MS.gene87430 | 0.822798 | 1.95E-53 | -1.69E-46 |
| MS.gene05604 | MS.gene87430 | 0.80236 | 5.82E-49 | -1.69E-46 |
| MS.gene058042 | MS.gene87430 | 0.846219 | 2.49E-59 | -1.69E-46 |
| MS.gene058168 | MS.gene87430 | 0.829458 | 5.09E-55 | -1.69E-46 |
| MS.gene059006 | MS.gene87430 | 0.814478 | 1.51E-51 | -1.69E-46 |
| MS.gene059124 | MS.gene87430 | 0.801816 | 7.53E-49 | -1.69E-46 |
| MS.gene060137 | MS.gene87430 | -0.809349 | 1.98E-50 | -1.69E-46 |
| MS.gene060802 | MS.gene87430 | 0.807352 | 5.27E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene87430 | 0.827973 | 1.16E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87430.t1 | MTR_8g077830 | 97.674 | 473 | 7 | 1 | 1 | 469 | 1 | 473 | 0.0 | 933 |
| MS.gene87430.t1 | MTR_5g019950 | 74.617 | 457 | 100 | 4 | 19 | 463 | 18 | 470 | 0.0 | 598 |
| MS.gene87430.t1 | MTR_3g109950 | 65.721 | 423 | 132 | 4 | 49 | 464 | 53 | 469 | 0.0 | 523 |
| MS.gene87430.t1 | MTR_3g109950 | 65.743 | 397 | 123 | 4 | 49 | 438 | 53 | 443 | 3.48e-168 | 481 |
| MS.gene87430.t1 | MTR_8g088080 | 61.631 | 417 | 145 | 3 | 62 | 466 | 65 | 478 | 1.16e-155 | 451 |
| MS.gene87430.t1 | MTR_8g088070 | 60.000 | 415 | 149 | 4 | 62 | 463 | 60 | 470 | 1.48e-151 | 440 |
| MS.gene87430.t1 | MTR_1g026910 | 50.993 | 453 | 210 | 4 | 20 | 462 | 6 | 456 | 1.84e-145 | 424 |
| MS.gene87430.t1 | MTR_3g109950 | 64.387 | 351 | 112 | 4 | 49 | 392 | 53 | 397 | 1.84e-142 | 415 |
| MS.gene87430.t1 | MTR_1g026910 | 51.049 | 429 | 198 | 4 | 20 | 438 | 6 | 432 | 2.65e-132 | 389 |
| MS.gene87430.t1 | MTR_7g103300 | 52.555 | 411 | 181 | 4 | 63 | 461 | 51 | 459 | 3.78e-126 | 375 |
| MS.gene87430.t1 | MTR_7g103300 | 52.709 | 406 | 178 | 4 | 68 | 461 | 8 | 411 | 3.15e-123 | 365 |
| MS.gene87430.t1 | MTR_7g103300 | 53.608 | 388 | 166 | 4 | 63 | 438 | 51 | 436 | 7.46e-119 | 355 |
| MS.gene87430.t1 | MTR_7g103300 | 51.752 | 371 | 165 | 4 | 103 | 461 | 1 | 369 | 2.67e-113 | 338 |
| MS.gene87430.t1 | MTR_7g103300 | 52.907 | 344 | 148 | 4 | 63 | 394 | 51 | 392 | 2.42e-102 | 311 |
| MS.gene87430.t1 | MTR_7g103300 | 51.935 | 310 | 135 | 4 | 63 | 360 | 51 | 358 | 1.87e-84 | 264 |
| MS.gene87430.t1 | MTR_1g061710 | 45.515 | 301 | 156 | 4 | 17 | 312 | 9 | 306 | 5.94e-74 | 242 |
| MS.gene87430.t1 | MTR_1g061710 | 53.922 | 102 | 47 | 0 | 360 | 461 | 427 | 528 | 1.25e-26 | 113 |
| MS.gene87430.t1 | MTR_5g019970 | 84.466 | 103 | 16 | 0 | 359 | 461 | 6 | 108 | 3.63e-47 | 159 |
| MS.gene87430.t1 | MTR_2g010740 | 29.243 | 383 | 247 | 8 | 100 | 461 | 87 | 466 | 1.25e-41 | 154 |
| MS.gene87430.t1 | MTR_2g010740 | 28.086 | 324 | 209 | 8 | 68 | 370 | 55 | 375 | 1.28e-24 | 105 |
| MS.gene87430.t1 | MTR_3g110012 | 48.305 | 118 | 38 | 2 | 297 | 391 | 27 | 144 | 1.46e-17 | 80.1 |
| MS.gene87430.t1 | MTR_3g109980 | 48.305 | 118 | 38 | 2 | 297 | 391 | 27 | 144 | 1.46e-17 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87430.t1 | AT2G25737 | 60.430 | 465 | 167 | 5 | 15 | 464 | 13 | 475 | 0.0 | 515 |
| MS.gene87430.t1 | AT2G25737 | 57.064 | 361 | 138 | 5 | 15 | 360 | 13 | 371 | 1.54e-124 | 367 |
| MS.gene87430.t1 | AT2G36630 | 48.434 | 415 | 204 | 3 | 57 | 461 | 42 | 456 | 1.02e-117 | 353 |
| MS.gene87430.t1 | AT1G11540 | 33.415 | 407 | 238 | 8 | 76 | 461 | 56 | 450 | 1.85e-46 | 167 |
| MS.gene87430.t1 | AT1G11540 | 32.982 | 379 | 221 | 8 | 104 | 461 | 1 | 367 | 9.79e-46 | 163 |
| MS.gene87430.t1 | AT1G61740 | 29.194 | 459 | 293 | 8 | 24 | 461 | 11 | 458 | 8.42e-45 | 163 |
| MS.gene87430.t1 | AT4G21250 | 31.754 | 422 | 237 | 9 | 68 | 461 | 51 | 449 | 2.37e-39 | 148 |
| MS.gene87430.t1 | AT4G21260 | 27.805 | 410 | 209 | 11 | 68 | 461 | 55 | 393 | 9.20e-29 | 117 |
Find 104 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAGGAGGTGGCTTCATTT+TGG | 0.204042 | 8.3:+26433102 | MS.gene87430:CDS |
| GATGGAAAATGAAGAATATA+TGG | 0.247767 | 8.3:+26434141 | MS.gene87430:CDS |
| TATCAGTTCTTATGTATGTT+TGG | 0.264788 | 8.3:+26432049 | MS.gene87430:CDS |
| AAAGGAAACAATTATGAAAA+AGG | 0.272024 | 8.3:+26431364 | MS.gene87430:CDS |
| GTTATTGCAGGTATGATTAC+AGG | 0.290362 | 8.3:+26430728 | MS.gene87430:intron |
| ATCAGTTCTTATGTATGTTT+GGG | 0.291680 | 8.3:+26432050 | MS.gene87430:CDS |
| AGAAAGATAATTGCTATCTT+TGG | 0.319840 | 8.3:+26433872 | MS.gene87430:CDS |
| AGTGTAGGAGGGGTAGGAGG+TGG | 0.323655 | 8.3:+26430356 | MS.gene87430:CDS |
| AGGCATCGATACATGGAAAA+AGG | 0.325374 | 8.3:+26431346 | MS.gene87430:CDS |
| GCCTTTGACTAAAGCTTTAG+TGG | 0.329119 | 8.3:-26431327 | None:intergenic |
| CCTATGCTCACTTTGATCAT+TGG | 0.330446 | 8.3:+26430392 | MS.gene87430:CDS |
| TTGGCTTCTTAATTCCTTGC+AGG | 0.341432 | 8.3:+26432218 | MS.gene87430:CDS |
| TAGAACCTGATTCCAACATT+TGG | 0.359466 | 8.3:-26431661 | None:intergenic |
| GAGAAGCATCAACAATTATA+TGG | 0.361224 | 8.3:+26430001 | MS.gene87430:CDS |
| ATTAAGAAGCCAATACTCTA+TGG | 0.361665 | 8.3:-26432208 | None:intergenic |
| AGTTCCTTTGCATAAGCATA+TGG | 0.364228 | 8.3:-26432975 | None:intergenic |
| TTCGTCTTCCAAAACTCTTT+CGG | 0.369986 | 8.3:-26430067 | None:intergenic |
| TCTCATTGTTCAAATTCTTA+AGG | 0.370958 | 8.3:+26432080 | MS.gene87430:CDS |
| TGCTTCTTACCATAGGGTAC+TGG | 0.372598 | 8.3:-26433688 | None:intergenic |
| TAGTTTAGCCGAAAGAGTTT+TGG | 0.383679 | 8.3:+26430059 | MS.gene87430:CDS |
| ATCACAGGTGGGGTGGGAAT+AGG | 0.390427 | 8.3:+26434103 | MS.gene87430:intron |
| AGAACCTGATTCCAACATTT+GGG | 0.395873 | 8.3:-26431660 | None:intergenic |
| GAATAGAATGATAAGCAAAA+TGG | 0.396738 | 8.3:-26430912 | None:intergenic |
| GTAGGAGGGGTAGGAGGTGG+AGG | 0.399768 | 8.3:+26430359 | MS.gene87430:CDS |
| GTTGAGCAGGAAATGAAGTT+TGG | 0.401432 | 8.3:+26430281 | MS.gene87430:intron |
| TTGGGAAGTGTAGGAGGGGT+AGG | 0.403096 | 8.3:+26430350 | MS.gene87430:CDS |
| GTTAGTGGTTTGCTTGGTCT+AGG | 0.405722 | 8.3:+26433085 | MS.gene87430:CDS |
| GGAAGTGTAGGAGGGGTAGG+AGG | 0.412992 | 8.3:+26430353 | MS.gene87430:CDS |
| TTTGTGAGCGCAATCAGTTT+AGG | 0.416463 | 8.3:+26433935 | MS.gene87430:CDS |
| GAGAGGGCTGTAGAAGACTT+TGG | 0.417036 | 8.3:-26430422 | None:intergenic |
| TTAATGTCATGTTTGCTGAT+TGG | 0.426685 | 8.3:+26430882 | MS.gene87430:CDS |
| AGTCTTCATATGAACGTGTT+TGG | 0.432389 | 8.3:+26430142 | MS.gene87430:CDS |
| AAACTTGTTCCATAGAGTAT+TGG | 0.436863 | 8.3:+26432199 | MS.gene87430:CDS |
| AGTGTAACAGACATTGCAAT+AGG | 0.442311 | 8.3:-26432944 | None:intergenic |
| ATAATAGCTGGTATGGTTAG+TGG | 0.442928 | 8.3:+26433070 | MS.gene87430:CDS |
| AGGCAACATGGTTGAGAAGA+TGG | 0.444124 | 8.3:+26434123 | MS.gene87430:CDS |
| ATGGAAAATGAAGAATATAT+GGG | 0.453528 | 8.3:+26434142 | MS.gene87430:CDS |
| CTTTACTTGACAACATTCAC+TGG | 0.454961 | 8.3:+26432019 | MS.gene87430:CDS |
| GCAGCCCAAATGTTGGAATC+AGG | 0.455292 | 8.3:+26431656 | MS.gene87430:CDS |
| AGCAGGAAATGAAGTTTGGT+TGG | 0.456534 | 8.3:+26430285 | MS.gene87430:intron |
| CAGTGAATGTTGTCAAGTAA+AGG | 0.464845 | 8.3:-26432018 | None:intergenic |
| TCCTCATCTTGTAGATCAGC+TGG | 0.467292 | 8.3:-26431908 | None:intergenic |
| GGTTTGCTTGGTCTAGGAGG+TGG | 0.469170 | 8.3:+26433091 | MS.gene87430:CDS |
| ATTGTCGTAGGTTCTATTGT+TGG | 0.473965 | 8.3:+26430311 | MS.gene87430:CDS |
| GCAACCATAGCTGCATTAAC+CGG | 0.475743 | 8.3:+26433836 | MS.gene87430:CDS |
| AGTGAATGTTGTCAAGTAAA+GGG | 0.481684 | 8.3:-26432017 | None:intergenic |
| GGAATTGGGAATTCCTCCTC+AGG | 0.483527 | 8.3:+26433138 | MS.gene87430:CDS |
| GGTATGATTACAGGAGCAGC+TGG | 0.484398 | 8.3:+26430737 | MS.gene87430:intron |
| CTGTGGAATAATAGCTGGTA+TGG | 0.485082 | 8.3:+26433063 | MS.gene87430:CDS |
| AACTAGAGTAATTGCATCAA+GGG | 0.487063 | 8.3:+26432994 | MS.gene87430:CDS |
| TTGCTTATCATTCTATTCAT+CGG | 0.491065 | 8.3:+26430917 | MS.gene87430:CDS |
| TGCTTCTGTGGAATAATAGC+TGG | 0.491856 | 8.3:+26433058 | MS.gene87430:CDS |
| CTTTCTCACCACATGTTGGC+CGG | 0.494055 | 8.3:-26433855 | None:intergenic |
| GGTATGGTTAGTGGTTTGCT+TGG | 0.496243 | 8.3:+26433079 | MS.gene87430:CDS |
| AGTTCTTATGTATGTTTGGG+TGG | 0.502161 | 8.3:+26432053 | MS.gene87430:CDS |
| TTGGCGATCACAGGTGGGGT+GGG | 0.504544 | 8.3:+26434097 | MS.gene87430:intron |
| GCAAGATCATAATCTATAAG+TGG | 0.507543 | 8.3:-26430809 | None:intergenic |
| TTTGGCGATCACAGGTGGGG+TGG | 0.507693 | 8.3:+26434096 | MS.gene87430:intron |
| CAATGATCAAAGTGAGCATA+GGG | 0.509691 | 8.3:-26430391 | None:intergenic |
| GAACTAGAGTAATTGCATCA+AGG | 0.511872 | 8.3:+26432993 | MS.gene87430:CDS |
| ATCTGTCTTTACTGCTTCTG+TGG | 0.513821 | 8.3:+26433046 | MS.gene87430:CDS |
| GCAGCATTGGGAAGTGTAGG+AGG | 0.516125 | 8.3:+26430344 | MS.gene87430:CDS |
| GGAGCAGCATTGGGAAGTGT+AGG | 0.522662 | 8.3:+26430341 | MS.gene87430:CDS |
| CAAGGGGAAAGGAAATCACT+TGG | 0.523181 | 8.3:+26433011 | MS.gene87430:CDS |
| GCTTCTTACCATAGGGTACT+GGG | 0.524532 | 8.3:-26433687 | None:intergenic |
| TAGTCAAAGGCATCGATACA+TGG | 0.531192 | 8.3:+26431339 | MS.gene87430:CDS |
| AGAAGTTTCTTCTGGTACAG+TGG | 0.532914 | 8.3:+26430117 | MS.gene87430:CDS |
| GATCGCTTCCCAGTACCCTA+TGG | 0.534547 | 8.3:+26433679 | MS.gene87430:CDS |
| CCAATGATCAAAGTGAGCAT+AGG | 0.539472 | 8.3:-26430392 | None:intergenic |
| TGTCATGTTTGCTGATTGGA+TGG | 0.542804 | 8.3:+26430886 | MS.gene87430:CDS |
| TTTCTCTTCCTCCATGTCAG+TGG | 0.546653 | 8.3:+26433639 | MS.gene87430:CDS |
| CAATTATATGGCTAGTCTCG+TGG | 0.555789 | 8.3:+26430013 | MS.gene87430:CDS |
| TAAGTGGCATGTCTAGTGTT+GGG | 0.556589 | 8.3:-26430793 | None:intergenic |
| AGTGGTTTGCTTGGTCTAGG+AGG | 0.560215 | 8.3:+26433088 | MS.gene87430:CDS |
| CAGCATTGGGAAGTGTAGGA+GGG | 0.565603 | 8.3:+26430345 | MS.gene87430:CDS |
| TCCACTAAAGCTTTAGTCAA+AGG | 0.565804 | 8.3:+26431326 | MS.gene87430:CDS |
| CTAATTCCTAGCATTAGCAT+AGG | 0.571256 | 8.3:-26430845 | None:intergenic |
| TGAGGAAGCAGCCCAAATGT+TGG | 0.572269 | 8.3:+26431649 | MS.gene87430:intron |
| ACTTGACAACATTCACTGGA+AGG | 0.572833 | 8.3:+26432023 | MS.gene87430:CDS |
| AGTAATTGCATCAAGGGGAA+AGG | 0.574209 | 8.3:+26433000 | MS.gene87430:CDS |
| TGCATTAACCGGCCAACATG+TGG | 0.574265 | 8.3:+26433847 | MS.gene87430:CDS |
| ATAAGTGGCATGTCTAGTGT+TGG | 0.578798 | 8.3:-26430794 | None:intergenic |
| GAAGCCATATGCTTATGCAA+AGG | 0.580245 | 8.3:+26432971 | MS.gene87430:CDS |
| AGCATTGGGAAGTGTAGGAG+GGG | 0.588416 | 8.3:+26430346 | MS.gene87430:CDS |
| TTGGCCGGTTAATGCAGCTA+TGG | 0.591965 | 8.3:-26433840 | None:intergenic |
| TTTCAGCCTATGCTAATGCT+AGG | 0.600746 | 8.3:+26430839 | MS.gene87430:CDS |
| CAACCGTGTATTACAATCTG+AGG | 0.602134 | 8.3:+26430762 | MS.gene87430:CDS |
| ATATAGAATATTTACCTGCA+AGG | 0.613818 | 8.3:-26432232 | None:intergenic |
| TTTGGTTGGAGAATTGTCGT+AGG | 0.615183 | 8.3:+26430299 | MS.gene87430:CDS |
| TGGAAAATGAAGAATATATG+GGG | 0.615202 | 8.3:+26434143 | MS.gene87430:CDS |
| AGCTGATCTACAAGATGAGG+AGG | 0.617477 | 8.3:+26431910 | MS.gene87430:CDS |
| AATATACTAACACTTAGAGA+GGG | 0.620159 | 8.3:-26430438 | None:intergenic |
| TTATCTTTCTCACCACATGT+TGG | 0.621904 | 8.3:-26433859 | None:intergenic |
| GAATGAGTTTGTACCTGAGG+AGG | 0.622331 | 8.3:-26433151 | None:intergenic |
| AAATATACTAACACTTAGAG+AGG | 0.625688 | 8.3:-26430439 | None:intergenic |
| ATAATATTGTACCACTGACA+TGG | 0.629151 | 8.3:-26433650 | None:intergenic |
| CTAATGCTAGGAATTAGCAT+TGG | 0.634658 | 8.3:+26430851 | MS.gene87430:CDS |
| ACCAGCTGATCTACAAGATG+AGG | 0.637481 | 8.3:+26431907 | MS.gene87430:CDS |
| ACTAGAGTAATTGCATCAAG+GGG | 0.654446 | 8.3:+26432995 | MS.gene87430:CDS |
| TTTGACAATCTCTGCCACCA+TGG | 0.655124 | 8.3:+26434166 | MS.gene87430:CDS |
| TGGGGTGGGAATAGGCAACA+TGG | 0.656926 | 8.3:+26434111 | MS.gene87430:CDS |
| GTATGATTACAGGAGCAGCT+GGG | 0.686475 | 8.3:+26430738 | MS.gene87430:CDS |
| AAGCCTCAGATTGTAATACA+CGG | 0.701059 | 8.3:-26430765 | None:intergenic |
| ATATTGTACCACTGACATGG+AGG | 0.737557 | 8.3:-26433647 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATT+TGG | + | chr8.3:26432282-26432301 | MS.gene87430:intron | 0.0% |
| !! | TAAAAAAAAAAAAAACTGAA+GGG | - | chr8.3:26433358-26433377 | None:intergenic | 10.0% |
| !! | TTAAAAAAAAAAAAAACTGA+AGG | - | chr8.3:26433359-26433378 | None:intergenic | 10.0% |
| !!! | GATTAAAGTTAATTTTAATA+AGG | + | chr8.3:26432543-26432562 | MS.gene87430:intron | 10.0% |
| !!! | TAATTTATAACTTTCTTTTT+TGG | + | chr8.3:26432685-26432704 | MS.gene87430:intron | 10.0% |
| !!! | TTAAATTTTCTATCATAAAT+GGG | - | chr8.3:26434018-26434037 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAACTGAAG+GGG | - | chr8.3:26433357-26433376 | None:intergenic | 15.0% |
| !! | AAATCCTTAAAAAAAATCTA+TGG | + | chr8.3:26432821-26432840 | MS.gene87430:intron | 15.0% |
| !! | ATAGTTCTTAATTTAACATT+TGG | + | chr8.3:26431792-26431811 | MS.gene87430:intron | 15.0% |
| !! | GACAATGTAAAAAATATTTA+CGG | + | chr8.3:26432780-26432799 | MS.gene87430:intron | 15.0% |
| !!! | AGTAAGGATAAAATTTATTT+TGG | + | chr8.3:26434044-26434063 | MS.gene87430:intron | 15.0% |
| !!! | GTTAAATTTTCTATCATAAA+TGG | - | chr8.3:26434019-26434038 | None:intergenic | 15.0% |
| !!! | TAAATTTTATCCTTACTTTA+TGG | - | chr8.3:26434041-26434060 | None:intergenic | 15.0% |
| !!! | TTATTGTATTTTGTTGAATT+CGG | + | chr8.3:26431018-26431037 | MS.gene87430:intron | 15.0% |
| !! | AAACTGTAATAACAAATACA+TGG | - | chr8.3:26433463-26433482 | None:intergenic | 20.0% |
| !! | AAAGGAAACAATTATGAAAA+AGG | + | chr8.3:26431364-26431383 | MS.gene87430:CDS | 20.0% |
| !! | AGTTGTATAACTTTATAGAT+TGG | + | chr8.3:26432343-26432362 | MS.gene87430:intron | 20.0% |
| !! | ATGGAAAATGAAGAATATAT+GGG | + | chr8.3:26434142-26434161 | MS.gene87430:CDS | 20.0% |
| !! | CTAAAAATACATATCTTGAT+TGG | + | chr8.3:26432852-26432871 | MS.gene87430:intron | 20.0% |
| !! | GAAAATTTAACCATAAAGTA+AGG | + | chr8.3:26434028-26434047 | MS.gene87430:intron | 20.0% |
| !! | GTAAAATGGTGATATAAAAA+TGG | - | chr8.3:26433496-26433515 | None:intergenic | 20.0% |
| !! | GTGTACTATTTATCAATTTA+AGG | + | chr8.3:26432919-26432938 | MS.gene87430:intron | 20.0% |
| !! | GTTCTTGAAAAAATTGAATT+TGG | - | chr8.3:26431269-26431288 | None:intergenic | 20.0% |
| !! | TGATATAGTAGTATACATAA+AGG | + | chr8.3:26432401-26432420 | MS.gene87430:intron | 20.0% |
| !! | TTAATTAACACAAATAAGAG+AGG | + | chr8.3:26431768-26431787 | MS.gene87430:intron | 20.0% |
| !! | TTCTTAAGGTAGTTAATATT+TGG | + | chr8.3:26432094-26432113 | MS.gene87430:intron | 20.0% |
| !!! | AAAGCCATAGATTTTTTTTA+AGG | - | chr8.3:26432828-26432847 | None:intergenic | 20.0% |
| !!! | ACAATTTTTGGTCTTTTAAT+AGG | - | chr8.3:26432382-26432401 | None:intergenic | 20.0% |
| !!! | ACTTTGATGAATATTTTTCA+CGG | + | chr8.3:26433385-26433404 | MS.gene87430:intron | 20.0% |
| !!! | AGACATATTTTAAATTTCCT+CGG | + | chr8.3:26433285-26433304 | MS.gene87430:intron | 20.0% |
| !!! | GGTGTAAATTTTTTTACATT+AGG | - | chr8.3:26432478-26432497 | None:intergenic | 20.0% |
| !!! | TACTACTATATCACAATTTT+TGG | - | chr8.3:26432394-26432413 | None:intergenic | 20.0% |
| ! | AAAAAACACTAACCATTCAA+GGG | - | chr8.3:26433518-26433537 | None:intergenic | 25.0% |
| ! | AAAAATAGAGCAATGCTATA+AGG | - | chr8.3:26433576-26433595 | None:intergenic | 25.0% |
| ! | AAATATACTAACACTTAGAG+AGG | - | chr8.3:26430442-26430461 | None:intergenic | 25.0% |
| ! | AAGAACTTTCGAAAATGAAT+TGG | - | chr8.3:26430684-26430703 | None:intergenic | 25.0% |
| ! | AATAACTACATAACGCAATA+TGG | - | chr8.3:26431003-26431022 | None:intergenic | 25.0% |
| ! | AATATACTAACACTTAGAGA+GGG | - | chr8.3:26430441-26430460 | None:intergenic | 25.0% |
| ! | AGAAAGATAATTGCTATCTT+TGG | + | chr8.3:26433872-26433891 | MS.gene87430:CDS | 25.0% |
| ! | AGAACTTTCGAAAATGAATT+GGG | - | chr8.3:26430683-26430702 | None:intergenic | 25.0% |
| ! | ATATAGAATATTTACCTGCA+AGG | - | chr8.3:26432235-26432254 | None:intergenic | 25.0% |
| ! | ATATATTGCTTCTTACCATA+GGG | - | chr8.3:26433697-26433716 | None:intergenic | 25.0% |
| ! | ATCAGTTCTTATGTATGTTT+GGG | + | chr8.3:26432050-26432069 | MS.gene87430:CDS | 25.0% |
| ! | GAATAGAATGATAAGCAAAA+TGG | - | chr8.3:26430915-26430934 | None:intergenic | 25.0% |
| ! | GATGGAAAATGAAGAATATA+TGG | + | chr8.3:26434141-26434160 | MS.gene87430:CDS | 25.0% |
| ! | TAAAAAACACTAACCATTCA+AGG | - | chr8.3:26433519-26433538 | None:intergenic | 25.0% |
| ! | TAATACAAATGTTCCTATGT+AGG | - | chr8.3:26432432-26432451 | None:intergenic | 25.0% |
| ! | TACTCTTACTATAAAGTAGA+AGG | - | chr8.3:26431601-26431620 | None:intergenic | 25.0% |
| ! | TATATATTGCTTCTTACCAT+AGG | - | chr8.3:26433698-26433717 | None:intergenic | 25.0% |
| ! | TATCAGTTCTTATGTATGTT+TGG | + | chr8.3:26432049-26432068 | MS.gene87430:CDS | 25.0% |
| ! | TCTCATTGTTCAAATTCTTA+AGG | + | chr8.3:26432080-26432099 | MS.gene87430:CDS | 25.0% |
| ! | TGAAAAAAAGAAGTTTCTTC+TGG | + | chr8.3:26430109-26430128 | MS.gene87430:CDS | 25.0% |
| ! | TGGAAAATGAAGAATATATG+GGG | + | chr8.3:26434143-26434162 | MS.gene87430:CDS | 25.0% |
| ! | TTGACATGATGTTATGAAAT+TGG | + | chr8.3:26430235-26430254 | MS.gene87430:intron | 25.0% |
| ! | TTGCTTATCATTCTATTCAT+CGG | + | chr8.3:26430917-26430936 | MS.gene87430:CDS | 25.0% |
| !! | AATTTTCTATCATAAATGGG+TGG | - | chr8.3:26434015-26434034 | None:intergenic | 25.0% |
| !! | ACTATTTTGTATGCGAAAAA+TGG | + | chr8.3:26430540-26430559 | MS.gene87430:intron | 25.0% |
| !! | GTTTTCCAAATCATTCTTTA+TGG | + | chr8.3:26431948-26431967 | MS.gene87430:intron | 25.0% |
| !! | TAGTAACAATGTCTCATTTT+TGG | + | chr8.3:26434078-26434097 | MS.gene87430:intron | 25.0% |
| !! | TTTTTCATGACAACAATTTC+TGG | - | chr8.3:26430096-26430115 | None:intergenic | 25.0% |
| !!! | CCTTTTTTAGTATCCTTAAT+CGG | - | chr8.3:26432595-26432614 | None:intergenic | 25.0% |
| !!! | GATTAATTGTGATTTGTTGA+CGG | - | chr8.3:26432499-26432518 | None:intergenic | 25.0% |
| !!! | GGTGATATAAAAATGGATTA+AGG | - | chr8.3:26433489-26433508 | None:intergenic | 25.0% |
| !!! | TCGTTGTTTTTCGTTTAAAA+TGG | - | chr8.3:26433431-26433450 | None:intergenic | 25.0% |
| AAATCTAGACAGTTTGATGT+CGG | + | chr8.3:26431171-26431190 | MS.gene87430:intron | 30.0% | |
| AACTAGAGTAATTGCATCAA+GGG | + | chr8.3:26432994-26433013 | MS.gene87430:CDS | 30.0% | |
| AACTATATAAAGCCTGTGTT+TGG | - | chr8.3:26431545-26431564 | None:intergenic | 30.0% | |
| ACTCTCCATAAAGAATGATT+TGG | - | chr8.3:26431956-26431975 | None:intergenic | 30.0% | |
| AGGTACGGAATATTTAGATA+CGG | - | chr8.3:26433556-26433575 | None:intergenic | 30.0% | |
| AGTCATCTACATGTAATAAC+TGG | - | chr8.3:26431714-26431733 | None:intergenic | 30.0% | |
| AGTGAATGTTGTCAAGTAAA+GGG | - | chr8.3:26432020-26432039 | None:intergenic | 30.0% | |
| ATAATATTGTACCACTGACA+TGG | - | chr8.3:26433653-26433672 | None:intergenic | 30.0% | |
| ATATGTAGCTTCACTGTAAA+CGG | + | chr8.3:26431473-26431492 | MS.gene87430:intron | 30.0% | |
| ATTAAGAAGCCAATACTCTA+TGG | - | chr8.3:26432211-26432230 | None:intergenic | 30.0% | |
| ATTCCCAATTCCAAAAACAA+TGG | - | chr8.3:26433130-26433149 | None:intergenic | 30.0% | |
| CATAAAGGTTTATCCTACAT+AGG | + | chr8.3:26432416-26432435 | MS.gene87430:intron | 30.0% | |
| CATGTTAGATATTCGATGTT+TGG | + | chr8.3:26430482-26430501 | MS.gene87430:intron | 30.0% | |
| CCGATTAAGGATACTAAAAA+AGG | + | chr8.3:26432592-26432611 | MS.gene87430:intron | 30.0% | |
| CTCAATCGAATATGTTAATG+AGG | + | chr8.3:26433222-26433241 | MS.gene87430:intron | 30.0% | |
| GAAAGTTCTTTCAAATACTC+TGG | + | chr8.3:26430694-26430713 | MS.gene87430:intron | 30.0% | |
| GCAAGATCATAATCTATAAG+TGG | - | chr8.3:26430812-26430831 | None:intergenic | 30.0% | |
| TAAAAAATGGTCATGCTAAC+CGG | - | chr8.3:26432736-26432755 | None:intergenic | 30.0% | |
| TATGTTAAATTCTTGTGTGC+AGG | + | chr8.3:26431993-26432012 | MS.gene87430:intron | 30.0% | |
| TTAATAAGGGAAATGCTAAC+CGG | + | chr8.3:26432557-26432576 | MS.gene87430:intron | 30.0% | |
| ! | AAACTTGTTCCATAGAGTAT+TGG | + | chr8.3:26432199-26432218 | MS.gene87430:CDS | 30.0% |
| ! | AAAGTGTTTGATAAACTCAC+AGG | - | chr8.3:26430168-26430187 | None:intergenic | 30.0% |
| ! | ATAGTAGCTTTTCCAAATCA+CGG | - | chr8.3:26431455-26431474 | None:intergenic | 30.0% |
| ! | CATAATACTATTTCTCTGCA+AGG | + | chr8.3:26432881-26432900 | MS.gene87430:intron | 30.0% |
| ! | TGTAATAACTGGAAGTATGT+AGG | - | chr8.3:26431703-26431722 | None:intergenic | 30.0% |
| ! | TTAATGTCATGTTTGCTGAT+TGG | + | chr8.3:26430882-26430901 | MS.gene87430:CDS | 30.0% |
| !! | AGGTAAACTTATAGCTTGTT+TGG | + | chr8.3:26431384-26431403 | MS.gene87430:intron | 30.0% |
| !! | ATTATTTTACAACTGTTCCG+AGG | - | chr8.3:26433305-26433324 | None:intergenic | 30.0% |
| !! | CATTGCTCTATTTTTCAATG+TGG | + | chr8.3:26433581-26433600 | MS.gene87430:intron | 30.0% |
| !! | GAGAAGCATCAACAATTATA+TGG | + | chr8.3:26430001-26430020 | MS.gene87430:CDS | 30.0% |
| !! | TAGATTTTAACGCATATAGG+TGG | - | chr8.3:26431205-26431224 | None:intergenic | 30.0% |
| !! | TGCTAGATTTTAACGCATAT+AGG | - | chr8.3:26431208-26431227 | None:intergenic | 30.0% |
| !! | TTCAGAAGCATCTGATATAA+GGG | - | chr8.3:26431870-26431889 | None:intergenic | 30.0% |
| !!! | AAACCCCAAATTTTTTTCCA+TGG | - | chr8.3:26434186-26434205 | None:intergenic | 30.0% |
| !!! | GGTTCTATTGTTGGATTTTT+TGG | + | chr8.3:26430320-26430339 | MS.gene87430:CDS | 30.0% |
| AACTACATAACGCAATATGG+TGG | - | chr8.3:26431000-26431019 | None:intergenic | 35.0% | |
| AAGCCTCAGATTGTAATACA+CGG | - | chr8.3:26430768-26430787 | None:intergenic | 35.0% | |
| AAGCTACAAATAGTAGCATG+TGG | + | chr8.3:26430565-26430584 | MS.gene87430:intron | 35.0% | |
| AATGAATGAGTTTGTACCTG+AGG | - | chr8.3:26433157-26433176 | None:intergenic | 35.0% | |
| ACTAGAGTAATTGCATCAAG+GGG | + | chr8.3:26432995-26433014 | MS.gene87430:CDS | 35.0% | |
| AGAACCTGATTCCAACATTT+GGG | - | chr8.3:26431663-26431682 | None:intergenic | 35.0% | |
| AGTCTTCATATGAACGTGTT+TGG | + | chr8.3:26430142-26430161 | MS.gene87430:CDS | 35.0% | |
| AGTGTAACAGACATTGCAAT+AGG | - | chr8.3:26432947-26432966 | None:intergenic | 35.0% | |
| AGTTCCTTTGCATAAGCATA+TGG | - | chr8.3:26432978-26432997 | None:intergenic | 35.0% | |
| AGTTCTTATGTATGTTTGGG+TGG | + | chr8.3:26432053-26432072 | MS.gene87430:CDS | 35.0% | |
| ATAATAGCTGGTATGGTTAG+TGG | + | chr8.3:26433070-26433089 | MS.gene87430:CDS | 35.0% | |
| ATGGTACAATTTCCACATCA+AGG | - | chr8.3:26431518-26431537 | None:intergenic | 35.0% | |
| ATTGTCGTAGGTTCTATTGT+TGG | + | chr8.3:26430311-26430330 | MS.gene87430:CDS | 35.0% | |
| CAATGATCAAAGTGAGCATA+GGG | - | chr8.3:26430394-26430413 | None:intergenic | 35.0% | |
| CAGTGAATGTTGTCAAGTAA+AGG | - | chr8.3:26432021-26432040 | None:intergenic | 35.0% | |
| CCACCATGGAAAAAAATTTG+GGG | + | chr8.3:26434180-26434199 | MS.gene87430:CDS | 35.0% | |
| CTAACCATTCAAGGGTAAAA+TGG | - | chr8.3:26433510-26433529 | None:intergenic | 35.0% | |
| CTAATGCTAGGAATTAGCAT+TGG | + | chr8.3:26430851-26430870 | MS.gene87430:CDS | 35.0% | |
| CTAATTCCTAGCATTAGCAT+AGG | - | chr8.3:26430848-26430867 | None:intergenic | 35.0% | |
| CTTTACTTGACAACATTCAC+TGG | + | chr8.3:26432019-26432038 | MS.gene87430:CDS | 35.0% | |
| GAACTAGAGTAATTGCATCA+AGG | + | chr8.3:26432993-26433012 | MS.gene87430:CDS | 35.0% | |
| GAATGCATGTATTGTGTGTT+TGG | - | chr8.3:26430637-26430656 | None:intergenic | 35.0% | |
| GAGGAGGTAATTATTTCCAA+GGG | + | chr8.3:26431926-26431945 | MS.gene87430:intron | 35.0% | |
| GCCACCATGGAAAAAAATTT+GGG | + | chr8.3:26434179-26434198 | MS.gene87430:CDS | 35.0% | |
| GGCTTTCGAAGTTAAAAAGA+AGG | + | chr8.3:26429969-26429988 | MS.gene87430:CDS | 35.0% | |
| GGTACGGAATATTTAGATAC+GGG | - | chr8.3:26433555-26433574 | None:intergenic | 35.0% | |
| GTTATTGCAGGTATGATTAC+AGG | + | chr8.3:26430728-26430747 | MS.gene87430:intron | 35.0% | |
| TACAAATAGTAGCATGTGGT+TGG | + | chr8.3:26430569-26430588 | MS.gene87430:intron | 35.0% | |
| TACTATGCTACTGAACTTTC+AGG | + | chr8.3:26431619-26431638 | MS.gene87430:intron | 35.0% | |
| TAGAACCTGATTCCAACATT+TGG | - | chr8.3:26431664-26431683 | None:intergenic | 35.0% | |
| TAGAGCAATGCTATAAGGTA+CGG | - | chr8.3:26433571-26433590 | None:intergenic | 35.0% | |
| TATGTAGCTTCACTGTAAAC+GGG | + | chr8.3:26431474-26431493 | MS.gene87430:intron | 35.0% | |
| TCTTTATGGAGAGTTCATTG+AGG | + | chr8.3:26431962-26431981 | MS.gene87430:intron | 35.0% | |
| TGAGGAGGTAATTATTTCCA+AGG | + | chr8.3:26431925-26431944 | MS.gene87430:intron | 35.0% | |
| TGCAAGGTCTAACTGAAATT+TGG | + | chr8.3:26432897-26432916 | MS.gene87430:intron | 35.0% | |
| TGCCACCATGGAAAAAAATT+TGG | + | chr8.3:26434178-26434197 | MS.gene87430:CDS | 35.0% | |
| TTAATGAGGAGTCAGTTTAG+TGG | + | chr8.3:26433236-26433255 | MS.gene87430:intron | 35.0% | |
| TTATCTTTCTCACCACATGT+TGG | - | chr8.3:26433862-26433881 | None:intergenic | 35.0% | |
| TTCGTCTTCCAAAACTCTTT+CGG | - | chr8.3:26430070-26430089 | None:intergenic | 35.0% | |
| ! | AGAATGATTTGGAAAACCCT+TGG | - | chr8.3:26431945-26431964 | None:intergenic | 35.0% |
| ! | ATCACCATTTTACCCTTGAA+TGG | + | chr8.3:26433503-26433522 | MS.gene87430:intron | 35.0% |
| ! | TAGTTTAGCCGAAAGAGTTT+TGG | + | chr8.3:26430059-26430078 | MS.gene87430:CDS | 35.0% |
| ! | TCCACTAAAGCTTTAGTCAA+AGG | + | chr8.3:26431326-26431345 | MS.gene87430:CDS | 35.0% |
| ! | TGCTACATCAACTTTTGCTA+TGG | + | chr8.3:26433615-26433634 | MS.gene87430:CDS | 35.0% |
| !! | CTTCAGAAGCATCTGATATA+AGG | - | chr8.3:26431871-26431890 | None:intergenic | 35.0% |
| !! | TCAGAAGCATCTGATATAAG+GGG | - | chr8.3:26431869-26431888 | None:intergenic | 35.0% |
| !! | TTATAGCTTGTTTGGATGTG+CGG | + | chr8.3:26431392-26431411 | MS.gene87430:intron | 35.0% |
| !! | TTGGTGATGATGCATTGTAA+TGG | + | chr8.3:26430254-26430273 | MS.gene87430:intron | 35.0% |
| !!! | CATTTTGGGACCATTGTTTT+TGG | + | chr8.3:26433117-26433136 | MS.gene87430:CDS | 35.0% |
| !!! | GGACCATTGTTTTTGGAATT+GGG | + | chr8.3:26433124-26433143 | MS.gene87430:CDS | 35.0% |
| !!! | TTGTAATGGTTTTGTTGAGC+AGG | + | chr8.3:26430268-26430287 | MS.gene87430:intron | 35.0% |
| ACTGATTGCGCTCACAAAAA+TGG | - | chr8.3:26433933-26433952 | None:intergenic | 40.0% | |
| ACTTGACAACATTCACTGGA+AGG | + | chr8.3:26432023-26432042 | MS.gene87430:CDS | 40.0% | |
| AGAAGTTTCTTCTGGTACAG+TGG | + | chr8.3:26430117-26430136 | MS.gene87430:CDS | 40.0% | |
| AGCAGGAAATGAAGTTTGGT+TGG | + | chr8.3:26430285-26430304 | MS.gene87430:intron | 40.0% | |
| AGGCAAAAATTGCCGTGATT+TGG | + | chr8.3:26431440-26431459 | MS.gene87430:intron | 40.0% | |
| AGTAATTGCATCAAGGGGAA+AGG | + | chr8.3:26433000-26433019 | MS.gene87430:CDS | 40.0% | |
| AGTGACCGATGAATTGAGAT+CGG | + | chr8.3:26431090-26431109 | MS.gene87430:intron | 40.0% | |
| ATAAGTGGCATGTCTAGTGT+TGG | - | chr8.3:26430797-26430816 | None:intergenic | 40.0% | |
| ATATTGTACCACTGACATGG+AGG | - | chr8.3:26433650-26433669 | None:intergenic | 40.0% | |
| ATCTGTCTTTACTGCTTCTG+TGG | + | chr8.3:26433046-26433065 | MS.gene87430:CDS | 40.0% | |
| ATGTAGCTTCACTGTAAACG+GGG | + | chr8.3:26431475-26431494 | MS.gene87430:intron | 40.0% | |
| CAACCGTGTATTACAATCTG+AGG | + | chr8.3:26430762-26430781 | MS.gene87430:CDS | 40.0% | |
| CACGGAAATGCTAGATTGTA+CGG | + | chr8.3:26433403-26433422 | MS.gene87430:intron | 40.0% | |
| CCAATGATCAAAGTGAGCAT+AGG | - | chr8.3:26430395-26430414 | None:intergenic | 40.0% | |
| CCTATGCTCACTTTGATCAT+TGG | + | chr8.3:26430392-26430411 | MS.gene87430:CDS | 40.0% | |
| CTGTGGAATAATAGCTGGTA+TGG | + | chr8.3:26433063-26433082 | MS.gene87430:CDS | 40.0% | |
| GAAGCCATATGCTTATGCAA+AGG | + | chr8.3:26432971-26432990 | MS.gene87430:CDS | 40.0% | |
| GTATGTAGGCACTTACAATC+AGG | - | chr8.3:26431689-26431708 | None:intergenic | 40.0% | |
| GTGAATGCTTTGTATTGCTC+AGG | - | chr8.3:26431048-26431067 | None:intergenic | 40.0% | |
| GTTGAGCAGGAAATGAAGTT+TGG | + | chr8.3:26430281-26430300 | MS.gene87430:intron | 40.0% | |
| TAAGTGGCATGTCTAGTGTT+GGG | - | chr8.3:26430796-26430815 | None:intergenic | 40.0% | |
| TGCTTCTGTGGAATAATAGC+TGG | + | chr8.3:26433058-26433077 | MS.gene87430:CDS | 40.0% | |
| TTCATATAGCTTCTGAACCG+CGG | - | chr8.3:26430595-26430614 | None:intergenic | 40.0% | |
| TTGATGCAACACATGGTGAT+AGG | + | chr8.3:26431299-26431318 | MS.gene87430:intron | 40.0% | |
| TTGGCTTCTTAATTCCTTGC+AGG | + | chr8.3:26432218-26432237 | MS.gene87430:CDS | 40.0% | |
| TTTCAGCCTATGCTAATGCT+AGG | + | chr8.3:26430839-26430858 | MS.gene87430:CDS | 40.0% | |
| TTTGGTTGGAGAATTGTCGT+AGG | + | chr8.3:26430299-26430318 | MS.gene87430:CDS | 40.0% | |
| TTTGTGAGCGCAATCAGTTT+AGG | + | chr8.3:26433935-26433954 | MS.gene87430:CDS | 40.0% | |
| ! | AATCACGGCAATTTTTGCCT+TGG | - | chr8.3:26431440-26431459 | None:intergenic | 40.0% |
| ! | AGTATCCTTAATCGGTGTTC+CGG | - | chr8.3:26432587-26432606 | None:intergenic | 40.0% |
| ! | ATCACGGCAATTTTTGCCTT+GGG | - | chr8.3:26431439-26431458 | None:intergenic | 40.0% |
| ! | GCCTTTGACTAAAGCTTTAG+TGG | - | chr8.3:26431330-26431349 | None:intergenic | 40.0% |
| ! | TATCCAGTTGATGCAACACA+TGG | + | chr8.3:26431292-26431311 | MS.gene87430:intron | 40.0% |
| ! | TATGAACTAGCTTCTGAACG+CGG | + | chr8.3:26430609-26430628 | MS.gene87430:intron | 40.0% |
| ! | TGTCATGTTTGCTGATTGGA+TGG | + | chr8.3:26430886-26430905 | MS.gene87430:CDS | 40.0% |
| !! | AGGCATCGATACATGGAAAA+AGG | + | chr8.3:26431346-26431365 | MS.gene87430:CDS | 40.0% |
| !! | CAATTATATGGCTAGTCTCG+TGG | + | chr8.3:26430013-26430032 | MS.gene87430:CDS | 40.0% |
| !! | GCTCTATTTTTCAATGTGGC+AGG | + | chr8.3:26433585-26433604 | MS.gene87430:intron | 40.0% |
| !! | GCTGCTATCTTTGTTATTGC+AGG | + | chr8.3:26430716-26430735 | MS.gene87430:intron | 40.0% |
| !! | TAGTCAAAGGCATCGATACA+TGG | + | chr8.3:26431339-26431358 | MS.gene87430:CDS | 40.0% |
| !!! | CCCCAAATTTTTTTCCATGG+TGG | - | chr8.3:26434183-26434202 | None:intergenic | 40.0% |
| !!! | GGATTTTTTGGAGCAGCATT+GGG | + | chr8.3:26430332-26430351 | MS.gene87430:CDS | 40.0% |
| !!! | GGGACCATTGTTTTTGGAAT+TGG | + | chr8.3:26433123-26433142 | MS.gene87430:CDS | 40.0% |
| !!! | TGGATTTTTTGGAGCAGCAT+TGG | + | chr8.3:26430331-26430350 | MS.gene87430:CDS | 40.0% |
| ACCAGCTGATCTACAAGATG+AGG | + | chr8.3:26431907-26431926 | MS.gene87430:CDS | 45.0% | |
| ACCGATGAATTGAGATCGGA+CGG | + | chr8.3:26431094-26431113 | MS.gene87430:intron | 45.0% | |
| ACCGTCCGATCTCAATTCAT+CGG | - | chr8.3:26431098-26431117 | None:intergenic | 45.0% | |
| AGCTGATCTACAAGATGAGG+AGG | + | chr8.3:26431910-26431929 | MS.gene87430:CDS | 45.0% | |
| AGGCAACATGGTTGAGAAGA+TGG | + | chr8.3:26434123-26434142 | MS.gene87430:CDS | 45.0% | |
| CAAGGGGAAAGGAAATCACT+TGG | + | chr8.3:26433011-26433030 | MS.gene87430:CDS | 45.0% | |
| GAACTTTCAGGAAGCCTTTG+AGG | + | chr8.3:26431631-26431650 | MS.gene87430:intron | 45.0% | |
| GAATGAGTTTGTACCTGAGG+AGG | - | chr8.3:26433154-26433173 | None:intergenic | 45.0% | |
| GCAACCATAGCTGCATTAAC+CGG | + | chr8.3:26433836-26433855 | MS.gene87430:CDS | 45.0% | |
| GTATGATTACAGGAGCAGCT+GGG | + | chr8.3:26430738-26430757 | MS.gene87430:CDS | 45.0% | |
| TAACGCATATAGGTGGTCGT+TGG | - | chr8.3:26431198-26431217 | None:intergenic | 45.0% | |
| TCACCATGTGTTGCATCAAC+TGG | - | chr8.3:26431298-26431317 | None:intergenic | 45.0% | |
| TCCACATCAAGGCAAAAGCA+CGG | - | chr8.3:26431507-26431526 | None:intergenic | 45.0% | |
| TCCTCATCTTGTAGATCAGC+TGG | - | chr8.3:26431911-26431930 | None:intergenic | 45.0% | |
| TGCTTCTTACCATAGGGTAC+TGG | - | chr8.3:26433691-26433710 | None:intergenic | 45.0% | |
| TGTACCATAGAGCCAAACAC+AGG | + | chr8.3:26431530-26431549 | MS.gene87430:intron | 45.0% | |
| TTTCTCTTCCTCCATGTCAG+TGG | + | chr8.3:26433639-26433658 | MS.gene87430:CDS | 45.0% | |
| TTTGACAATCTCTGCCACCA+TGG | + | chr8.3:26434166-26434185 | MS.gene87430:CDS | 45.0% | |
| ! | CTAGGAGGTGGCTTCATTTT+GGG | + | chr8.3:26433103-26433122 | MS.gene87430:CDS | 45.0% |
| ! | GCTTCTTACCATAGGGTACT+GGG | - | chr8.3:26433690-26433709 | None:intergenic | 45.0% |
| ! | GTATCCTTAATCGGTGTTCC+GGG | - | chr8.3:26432586-26432605 | None:intergenic | 45.0% |
| ! | TATCCTTAATCGGTGTTCCG+GGG | - | chr8.3:26432585-26432604 | None:intergenic | 45.0% |
| ! | TCTAGGAGGTGGCTTCATTT+TGG | + | chr8.3:26433102-26433121 | MS.gene87430:CDS | 45.0% |
| !! | AAAGCCTGTGTTTGGCTCTA+TGG | - | chr8.3:26431537-26431556 | None:intergenic | 45.0% |
| !! | GGTATGGTTAGTGGTTTGCT+TGG | + | chr8.3:26433079-26433098 | MS.gene87430:CDS | 45.0% |
| !! | GTTAGTGGTTTGCTTGGTCT+AGG | + | chr8.3:26433085-26433104 | MS.gene87430:CDS | 45.0% |
| !!! | ATTTTTGGCGATCACAGGTG+GGG | + | chr8.3:26434093-26434112 | MS.gene87430:intron | 45.0% |
| !!! | CATTTTTGGCGATCACAGGT+GGG | + | chr8.3:26434092-26434111 | MS.gene87430:intron | 45.0% |
| !!! | GTCTCATTTTTGGCGATCAC+AGG | + | chr8.3:26434088-26434107 | MS.gene87430:intron | 45.0% |
| !!! | TCATTTTTGGCGATCACAGG+TGG | + | chr8.3:26434091-26434110 | MS.gene87430:intron | 45.0% |
| !! | ATTATCATATTATTAAAAAA+TGG | - | chr8.3:26432749-26432768 | None:intergenic | 5.0% |
| !!! | ATTAAAGTTAATTTTAATAA+GGG | + | chr8.3:26432544-26432563 | MS.gene87430:intron | 5.0% |
| CATTTGGGCTGCTTCCTCAA+AGG | - | chr8.3:26431648-26431667 | None:intergenic | 50.0% | |
| CTTTCTCACCACATGTTGGC+CGG | - | chr8.3:26433858-26433877 | None:intergenic | 50.0% | |
| GAGAGGGCTGTAGAAGACTT+TGG | - | chr8.3:26430425-26430444 | None:intergenic | 50.0% | |
| GCAGCCCAAATGTTGGAATC+AGG | + | chr8.3:26431656-26431675 | MS.gene87430:CDS | 50.0% | |
| GGAATTGGGAATTCCTCCTC+AGG | + | chr8.3:26433138-26433157 | MS.gene87430:CDS | 50.0% | |
| GGTATCCTTAACCAGTGCCT+CGG | + | chr8.3:26432706-26432725 | MS.gene87430:intron | 50.0% | |
| GGTATGATTACAGGAGCAGC+TGG | + | chr8.3:26430737-26430756 | MS.gene87430:intron | 50.0% | |
| GTATCCTTAACCAGTGCCTC+GGG | + | chr8.3:26432707-26432726 | MS.gene87430:intron | 50.0% | |
| TGAGGAAGCAGCCCAAATGT+TGG | + | chr8.3:26431649-26431668 | MS.gene87430:intron | 50.0% | |
| TGCATTAACCGGCCAACATG+TGG | + | chr8.3:26433847-26433866 | MS.gene87430:CDS | 50.0% | |
| TTGGCCGGTTAATGCAGCTA+TGG | - | chr8.3:26433843-26433862 | None:intergenic | 50.0% | |
| ! | AGCATTGGGAAGTGTAGGAG+GGG | + | chr8.3:26430346-26430365 | MS.gene87430:CDS | 50.0% |
| ! | CAGCATTGGGAAGTGTAGGA+GGG | + | chr8.3:26430345-26430364 | MS.gene87430:CDS | 50.0% |
| !! | AGTGGTTTGCTTGGTCTAGG+AGG | + | chr8.3:26433088-26433107 | MS.gene87430:CDS | 50.0% |
| !! | TAGCTTGTTTGGATGTGCGG+TGG | + | chr8.3:26431395-26431414 | MS.gene87430:intron | 50.0% |
| ATCACAGGTGGGGTGGGAAT+AGG | + | chr8.3:26434103-26434122 | MS.gene87430:intron | 55.0% | |
| GATCGCTTCCCAGTACCCTA+TGG | + | chr8.3:26433679-26433698 | MS.gene87430:CDS | 55.0% | |
| TGGGGTGGGAATAGGCAACA+TGG | + | chr8.3:26434111-26434130 | MS.gene87430:CDS | 55.0% | |
| ! | CATCAAGGCAAAAGCACGGC+AGG | - | chr8.3:26431503-26431522 | None:intergenic | 55.0% |
| ! | GCAGCATTGGGAAGTGTAGG+AGG | + | chr8.3:26430344-26430363 | MS.gene87430:CDS | 55.0% |
| ! | GCCGTGCTTTTGCCTTGATG+TGG | + | chr8.3:26431503-26431522 | MS.gene87430:intron | 55.0% |
| ! | GGAGCAGCATTGGGAAGTGT+AGG | + | chr8.3:26430341-26430360 | MS.gene87430:CDS | 55.0% |
| ! | GGTTTGCTTGGTCTAGGAGG+TGG | + | chr8.3:26433091-26433110 | MS.gene87430:CDS | 55.0% |
| ! | TAGTAGCATGTGGTTGGCCG+CGG | + | chr8.3:26430575-26430594 | MS.gene87430:intron | 55.0% |
| ! | TTGGGAAGTGTAGGAGGGGT+AGG | + | chr8.3:26430350-26430369 | MS.gene87430:CDS | 55.0% |
| AGTGTAGGAGGGGTAGGAGG+TGG | + | chr8.3:26430356-26430375 | MS.gene87430:CDS | 60.0% | |
| GGAAATGCTAACCGGTGCCC+CGG | + | chr8.3:26432565-26432584 | MS.gene87430:intron | 60.0% | |
| TAACCAGTGCCTCGGGACAC+CGG | + | chr8.3:26432714-26432733 | MS.gene87430:intron | 60.0% | |
| TCATGCTAACCGGTGTCCCG+AGG | - | chr8.3:26432726-26432745 | None:intergenic | 60.0% | |
| TTGGCGATCACAGGTGGGGT+GGG | + | chr8.3:26434097-26434116 | MS.gene87430:intron | 60.0% | |
| TTTGGCGATCACAGGTGGGG+TGG | + | chr8.3:26434096-26434115 | MS.gene87430:intron | 60.0% | |
| ! | GCAGCTTTTCTCGCGTCCCA+AGG | + | chr8.3:26431420-26431439 | MS.gene87430:intron | 60.0% |
| ! | GGAAGTGTAGGAGGGGTAGG+AGG | + | chr8.3:26430353-26430372 | MS.gene87430:CDS | 60.0% |
| ! | GTGCCCCGGAACACCGATTA+AGG | + | chr8.3:26432579-26432598 | MS.gene87430:intron | 60.0% |
| ! | TAATCGGTGTTCCGGGGCAC+CGG | - | chr8.3:26432579-26432598 | None:intergenic | 60.0% |
| !! | GTGTCCCGAGGCACTGGTTA+AGG | - | chr8.3:26432714-26432733 | None:intergenic | 60.0% |
| GTAGGAGGGGTAGGAGGTGG+AGG | + | chr8.3:26430359-26430378 | MS.gene87430:CDS | 65.0% | |
| TAACCGGTGTCCCGAGGCAC+TGG | - | chr8.3:26432720-26432739 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 26429967 | 26434207 | 26429967 | ID=MS.gene87430 |
| chr8.3 | mRNA | 26429967 | 26434207 | 26429967 | ID=MS.gene87430.t1;Parent=MS.gene87430 |
| chr8.3 | exon | 26429967 | 26430167 | 26429967 | ID=MS.gene87430.t1.exon1;Parent=MS.gene87430.t1 |
| chr8.3 | CDS | 26429967 | 26430167 | 26429967 | ID=cds.MS.gene87430.t1;Parent=MS.gene87430.t1 |
| chr8.3 | exon | 26430290 | 26430449 | 26430290 | ID=MS.gene87430.t1.exon2;Parent=MS.gene87430.t1 |
| chr8.3 | CDS | 26430290 | 26430449 | 26430290 | ID=cds.MS.gene87430.t1;Parent=MS.gene87430.t1 |
| chr8.3 | exon | 26430738 | 26430938 | 26430738 | ID=MS.gene87430.t1.exon3;Parent=MS.gene87430.t1 |
| chr8.3 | CDS | 26430738 | 26430938 | 26430738 | ID=cds.MS.gene87430.t1;Parent=MS.gene87430.t1 |
| chr8.3 | exon | 26431321 | 26431385 | 26431321 | ID=MS.gene87430.t1.exon4;Parent=MS.gene87430.t1 |
| chr8.3 | CDS | 26431321 | 26431385 | 26431321 | ID=cds.MS.gene87430.t1;Parent=MS.gene87430.t1 |
| chr8.3 | exon | 26431653 | 26431692 | 26431653 | ID=MS.gene87430.t1.exon5;Parent=MS.gene87430.t1 |
| chr8.3 | CDS | 26431653 | 26431692 | 26431653 | ID=cds.MS.gene87430.t1;Parent=MS.gene87430.t1 |
| chr8.3 | exon | 26431879 | 26431931 | 26431879 | ID=MS.gene87430.t1.exon6;Parent=MS.gene87430.t1 |
| chr8.3 | CDS | 26431879 | 26431931 | 26431879 | ID=cds.MS.gene87430.t1;Parent=MS.gene87430.t1 |
| chr8.3 | exon | 26432015 | 26432101 | 26432015 | ID=MS.gene87430.t1.exon7;Parent=MS.gene87430.t1 |
| chr8.3 | CDS | 26432015 | 26432101 | 26432015 | ID=cds.MS.gene87430.t1;Parent=MS.gene87430.t1 |
| chr8.3 | exon | 26432189 | 26432239 | 26432189 | ID=MS.gene87430.t1.exon8;Parent=MS.gene87430.t1 |
| chr8.3 | CDS | 26432189 | 26432239 | 26432189 | ID=cds.MS.gene87430.t1;Parent=MS.gene87430.t1 |
| chr8.3 | exon | 26432941 | 26433159 | 26432941 | ID=MS.gene87430.t1.exon9;Parent=MS.gene87430.t1 |
| chr8.3 | CDS | 26432941 | 26433159 | 26432941 | ID=cds.MS.gene87430.t1;Parent=MS.gene87430.t1 |
| chr8.3 | exon | 26433607 | 26433700 | 26433607 | ID=MS.gene87430.t1.exon10;Parent=MS.gene87430.t1 |
| chr8.3 | CDS | 26433607 | 26433700 | 26433607 | ID=cds.MS.gene87430.t1;Parent=MS.gene87430.t1 |
| chr8.3 | exon | 26433816 | 26433956 | 26433816 | ID=MS.gene87430.t1.exon11;Parent=MS.gene87430.t1 |
| chr8.3 | CDS | 26433816 | 26433956 | 26433816 | ID=cds.MS.gene87430.t1;Parent=MS.gene87430.t1 |
| chr8.3 | exon | 26434110 | 26434207 | 26434110 | ID=MS.gene87430.t1.exon12;Parent=MS.gene87430.t1 |
| chr8.3 | CDS | 26434110 | 26434207 | 26434110 | ID=cds.MS.gene87430.t1;Parent=MS.gene87430.t1 |
| Gene Sequence |
| Protein sequence |
