Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88405.t1 | XP_003628011.1 | 97.8 | 400 | 4 | 1 | 1 | 400 | 1 | 395 | 8.10E-215 | 756.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88405.t1 | Q9FL41 | 64.0 | 408 | 132 | 5 | 1 | 400 | 1 | 401 | 5.2e-138 | 492.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88405.t1 | G7LID0 | 97.8 | 400 | 4 | 1 | 1 | 400 | 1 | 395 | 5.8e-215 | 756.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene88405 | -0.807552 | 4.78E-50 | -1.69E-46 |
| MS.gene049171 | MS.gene88405 | -0.811759 | 5.96E-51 | -1.69E-46 |
| MS.gene049217 | MS.gene88405 | -0.821773 | 3.38E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene88405 | -0.802092 | 6.61E-49 | -1.69E-46 |
| MS.gene050800 | MS.gene88405 | 0.800668 | 1.29E-48 | -1.69E-46 |
| MS.gene050937 | MS.gene88405 | 0.830816 | 2.37E-55 | -1.69E-46 |
| MS.gene051694 | MS.gene88405 | -0.832579 | 8.72E-56 | -1.69E-46 |
| MS.gene051838 | MS.gene88405 | -0.80209 | 6.62E-49 | -1.69E-46 |
| MS.gene051858 | MS.gene88405 | -0.80676 | 7.03E-50 | -1.69E-46 |
| MS.gene05234 | MS.gene88405 | 0.814289 | 1.66E-51 | -1.69E-46 |
| MS.gene053421 | MS.gene88405 | 0.828093 | 1.09E-54 | -1.69E-46 |
| MS.gene053632 | MS.gene88405 | -0.818426 | 1.97E-52 | -1.69E-46 |
| MS.gene053824 | MS.gene88405 | -0.803625 | 3.19E-49 | -1.69E-46 |
| MS.gene054422 | MS.gene88405 | 0.810776 | 9.74E-51 | -1.69E-46 |
| MS.gene055206 | MS.gene88405 | -0.84222 | 2.95E-58 | -1.69E-46 |
| MS.gene055577 | MS.gene88405 | -0.821005 | 5.08E-53 | -1.69E-46 |
| MS.gene055941 | MS.gene88405 | -0.816304 | 5.93E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene88405 | -0.804037 | 2.62E-49 | -1.69E-46 |
| MS.gene057658 | MS.gene88405 | -0.812969 | 3.24E-51 | -1.69E-46 |
| MS.gene058544 | MS.gene88405 | -0.810432 | 1.16E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene88405 | -0.829077 | 6.30E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene88405 | -0.811321 | 7.42E-51 | -1.69E-46 |
| MS.gene059902 | MS.gene88405 | -0.805339 | 1.40E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene88405 | -0.814207 | 1.73E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene056577 | MS.gene88405 | PPI |
| MS.gene88405 | MS.gene056576 | PPI |
| MS.gene83392 | MS.gene88405 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88405.t1 | MTR_8g041390 | 97.750 | 400 | 4 | 1 | 1 | 400 | 1 | 395 | 0.0 | 806 |
| MS.gene88405.t1 | MTR_3g012420 | 69.689 | 386 | 105 | 4 | 1 | 377 | 1 | 383 | 0.0 | 543 |
| MS.gene88405.t1 | MTR_1g030580 | 48.179 | 357 | 176 | 3 | 6 | 358 | 9 | 360 | 6.54e-116 | 343 |
| MS.gene88405.t1 | MTR_3g072500 | 45.170 | 383 | 197 | 5 | 3 | 375 | 10 | 389 | 3.09e-114 | 339 |
| MS.gene88405.t1 | MTR_1g068630 | 49.254 | 335 | 162 | 3 | 3 | 336 | 5 | 332 | 3.47e-111 | 330 |
| MS.gene88405.t1 | MTR_7g100050 | 46.579 | 380 | 190 | 5 | 1 | 378 | 1 | 369 | 5.12e-111 | 330 |
| MS.gene88405.t1 | MTR_3g072530 | 42.135 | 356 | 196 | 4 | 3 | 353 | 1 | 351 | 4.65e-105 | 315 |
| MS.gene88405.t1 | MTR_3g072560 | 42.199 | 391 | 205 | 6 | 9 | 399 | 14 | 383 | 5.20e-104 | 313 |
| MS.gene88405.t1 | MTR_1g030600 | 44.152 | 342 | 187 | 3 | 9 | 349 | 14 | 352 | 3.08e-99 | 301 |
| MS.gene88405.t1 | MTR_3g072520 | 46.064 | 343 | 180 | 5 | 10 | 350 | 6 | 345 | 1.11e-93 | 286 |
| MS.gene88405.t1 | MTR_0096s0100 | 42.515 | 334 | 183 | 4 | 13 | 344 | 18 | 344 | 1.70e-91 | 280 |
| MS.gene88405.t1 | MTR_1g074120 | 39.645 | 338 | 195 | 4 | 9 | 344 | 12 | 342 | 3.82e-82 | 256 |
| MS.gene88405.t1 | MTR_1g074070 | 39.583 | 336 | 192 | 4 | 9 | 343 | 12 | 337 | 2.75e-81 | 253 |
| MS.gene88405.t1 | MTR_1g051120 | 39.286 | 336 | 195 | 4 | 9 | 343 | 12 | 339 | 3.56e-81 | 253 |
| MS.gene88405.t1 | MTR_1g074160 | 38.329 | 347 | 203 | 5 | 3 | 345 | 1 | 340 | 6.46e-80 | 249 |
| MS.gene88405.t1 | MTR_3g112480 | 35.176 | 398 | 228 | 4 | 10 | 397 | 17 | 394 | 6.46e-80 | 251 |
| MS.gene88405.t1 | MTR_2g007990 | 40.116 | 344 | 195 | 5 | 7 | 346 | 9 | 345 | 5.10e-79 | 249 |
| MS.gene88405.t1 | MTR_3g072500 | 43.403 | 288 | 150 | 5 | 98 | 375 | 2 | 286 | 5.41e-78 | 243 |
| MS.gene88405.t1 | MTR_2g007960 | 35.492 | 386 | 227 | 9 | 7 | 375 | 6 | 386 | 6.58e-78 | 246 |
| MS.gene88405.t1 | MTR_1g074020 | 37.430 | 358 | 210 | 5 | 3 | 357 | 1 | 347 | 1.74e-77 | 244 |
| MS.gene88405.t1 | MTR_6g036450 | 36.202 | 337 | 208 | 4 | 10 | 344 | 13 | 344 | 1.12e-76 | 242 |
| MS.gene88405.t1 | MTR_7g111830 | 39.091 | 330 | 197 | 2 | 18 | 344 | 12 | 340 | 1.36e-76 | 242 |
| MS.gene88405.t1 | MTR_1g073990 | 38.719 | 359 | 197 | 8 | 9 | 360 | 12 | 354 | 9.48e-76 | 239 |
| MS.gene88405.t1 | MTR_1g023180 | 37.391 | 345 | 195 | 3 | 10 | 337 | 18 | 358 | 1.27e-75 | 240 |
| MS.gene88405.t1 | MTR_6g081840 | 39.557 | 316 | 190 | 1 | 22 | 337 | 19 | 333 | 1.45e-75 | 239 |
| MS.gene88405.t1 | MTR_2g027030 | 38.415 | 328 | 197 | 4 | 10 | 336 | 9 | 332 | 3.85e-75 | 238 |
| MS.gene88405.t1 | MTR_3g072500 | 44.656 | 262 | 142 | 2 | 3 | 264 | 10 | 268 | 1.27e-74 | 234 |
| MS.gene88405.t1 | MTR_3g095460 | 36.070 | 341 | 206 | 4 | 10 | 345 | 2 | 335 | 1.98e-74 | 235 |
| MS.gene88405.t1 | MTR_2g007970 | 36.000 | 375 | 230 | 4 | 18 | 392 | 17 | 381 | 2.69e-74 | 237 |
| MS.gene88405.t1 | MTR_4g094340 | 37.861 | 346 | 203 | 8 | 10 | 351 | 6 | 343 | 3.14e-73 | 233 |
| MS.gene88405.t1 | MTR_4g094340 | 38.068 | 352 | 205 | 9 | 5 | 351 | 18 | 361 | 5.11e-73 | 233 |
| MS.gene88405.t1 | MTR_8g006010 | 37.465 | 355 | 199 | 7 | 18 | 369 | 15 | 349 | 2.92e-72 | 231 |
| MS.gene88405.t1 | MTR_2g016710 | 35.329 | 334 | 209 | 2 | 7 | 340 | 2 | 328 | 4.35e-71 | 228 |
| MS.gene88405.t1 | MTR_4g094352 | 36.675 | 379 | 228 | 8 | 7 | 379 | 6 | 378 | 9.28e-71 | 227 |
| MS.gene88405.t1 | MTR_2g007260 | 36.154 | 390 | 232 | 7 | 18 | 400 | 19 | 398 | 1.64e-70 | 227 |
| MS.gene88405.t1 | MTR_3g095420 | 35.860 | 343 | 206 | 6 | 15 | 351 | 9 | 343 | 3.23e-70 | 225 |
| MS.gene88405.t1 | MTR_4g094362 | 36.522 | 345 | 212 | 4 | 8 | 351 | 9 | 347 | 8.52e-70 | 224 |
| MS.gene88405.t1 | MTR_2g102340 | 33.512 | 373 | 223 | 7 | 10 | 369 | 9 | 369 | 1.74e-67 | 218 |
| MS.gene88405.t1 | MTR_8g006090 | 38.235 | 340 | 201 | 5 | 11 | 346 | 6 | 340 | 6.95e-67 | 216 |
| MS.gene88405.t1 | MTR_4g094342 | 35.258 | 329 | 207 | 4 | 6 | 331 | 6 | 331 | 1.06e-66 | 216 |
| MS.gene88405.t1 | MTR_2g065550 | 35.882 | 340 | 199 | 6 | 11 | 341 | 5 | 334 | 2.69e-66 | 215 |
| MS.gene88405.t1 | MTR_1g070175 | 31.361 | 338 | 223 | 2 | 9 | 346 | 12 | 340 | 4.55e-66 | 214 |
| MS.gene88405.t1 | MTR_1g114210 | 34.211 | 342 | 219 | 4 | 3 | 344 | 1 | 336 | 8.96e-66 | 213 |
| MS.gene88405.t1 | MTR_5g021160 | 34.795 | 342 | 216 | 4 | 10 | 350 | 4 | 339 | 2.76e-65 | 213 |
| MS.gene88405.t1 | MTR_1g038560 | 34.627 | 335 | 207 | 5 | 13 | 344 | 3 | 328 | 2.38e-64 | 209 |
| MS.gene88405.t1 | MTR_3g095450 | 35.905 | 337 | 207 | 6 | 15 | 347 | 7 | 338 | 2.64e-64 | 210 |
| MS.gene88405.t1 | MTR_4g094360 | 35.588 | 340 | 211 | 5 | 8 | 345 | 9 | 342 | 3.25e-64 | 211 |
| MS.gene88405.t1 | MTR_1g030400 | 32.081 | 346 | 225 | 3 | 22 | 358 | 16 | 360 | 4.97e-64 | 209 |
| MS.gene88405.t1 | MTR_8g006120 | 36.364 | 341 | 202 | 6 | 11 | 343 | 5 | 338 | 1.70e-63 | 208 |
| MS.gene88405.t1 | MTR_3g072530 | 36.455 | 299 | 148 | 6 | 3 | 263 | 1 | 295 | 1.71e-62 | 203 |
| MS.gene88405.t1 | MTR_3g072500 | 46.445 | 211 | 111 | 1 | 3 | 213 | 10 | 218 | 2.16e-62 | 200 |
| MS.gene88405.t1 | MTR_3g112480 | 38.790 | 281 | 162 | 2 | 66 | 337 | 18 | 297 | 2.69e-62 | 204 |
| MS.gene88405.t1 | MTR_4g106720 | 32.738 | 336 | 216 | 5 | 15 | 346 | 13 | 342 | 1.29e-61 | 202 |
| MS.gene88405.t1 | MTR_8g092650 | 33.631 | 336 | 214 | 4 | 15 | 345 | 7 | 338 | 1.29e-60 | 200 |
| MS.gene88405.t1 | MTR_2g016710 | 33.766 | 308 | 197 | 2 | 7 | 314 | 2 | 302 | 1.53e-59 | 196 |
| MS.gene88405.t1 | MTR_5g034910 | 34.472 | 322 | 202 | 5 | 18 | 337 | 12 | 326 | 1.29e-58 | 194 |
| MS.gene88405.t1 | MTR_3g095440 | 37.092 | 337 | 203 | 5 | 15 | 347 | 7 | 338 | 2.32e-58 | 194 |
| MS.gene88405.t1 | MTR_1g014510 | 31.143 | 350 | 233 | 5 | 3 | 348 | 1 | 346 | 1.34e-57 | 195 |
| MS.gene88405.t1 | MTR_4g129650 | 33.939 | 330 | 201 | 5 | 18 | 341 | 13 | 331 | 1.88e-57 | 192 |
| MS.gene88405.t1 | MTR_4g094340 | 39.394 | 264 | 149 | 7 | 92 | 351 | 21 | 277 | 4.45e-56 | 186 |
| MS.gene88405.t1 | MTR_8g006050 | 34.125 | 337 | 186 | 8 | 42 | 375 | 23 | 326 | 1.08e-55 | 187 |
| MS.gene88405.t1 | MTR_8g006090 | 37.338 | 308 | 184 | 5 | 11 | 314 | 6 | 308 | 9.18e-55 | 183 |
| MS.gene88405.t1 | MTR_3g090550 | 33.846 | 325 | 204 | 5 | 20 | 344 | 16 | 329 | 9.66e-55 | 184 |
| MS.gene88405.t1 | MTR_5g034990 | 31.176 | 340 | 224 | 4 | 7 | 345 | 8 | 338 | 1.53e-54 | 184 |
| MS.gene88405.t1 | MTR_1g074160 | 37.358 | 265 | 156 | 4 | 3 | 264 | 1 | 258 | 2.84e-54 | 181 |
| MS.gene88405.t1 | MTR_0103s0090 | 33.628 | 339 | 211 | 9 | 9 | 343 | 7 | 335 | 3.10e-54 | 184 |
| MS.gene88405.t1 | MTR_5g034980 | 31.212 | 330 | 206 | 6 | 16 | 337 | 10 | 326 | 3.16e-53 | 181 |
| MS.gene88405.t1 | MTR_4g094360 | 33.876 | 307 | 197 | 4 | 10 | 314 | 11 | 313 | 1.67e-52 | 177 |
| MS.gene88405.t1 | MTR_5g069040 | 28.219 | 365 | 241 | 4 | 3 | 347 | 1 | 364 | 3.54e-51 | 176 |
| MS.gene88405.t1 | MTR_3g019050 | 28.446 | 341 | 233 | 3 | 3 | 336 | 1 | 337 | 3.36e-50 | 174 |
| MS.gene88405.t1 | MTR_5g034930 | 32.424 | 330 | 212 | 6 | 18 | 344 | 11 | 332 | 4.19e-50 | 172 |
| MS.gene88405.t1 | MTR_8g006090 | 38.403 | 263 | 157 | 3 | 84 | 346 | 3 | 260 | 1.24e-49 | 169 |
| MS.gene88405.t1 | MTR_5g025340 | 32.456 | 342 | 212 | 5 | 10 | 337 | 7 | 343 | 2.32e-49 | 171 |
| MS.gene88405.t1 | MTR_5g068790 | 26.425 | 386 | 273 | 4 | 3 | 379 | 1 | 384 | 7.32e-48 | 167 |
| MS.gene88405.t1 | MTR_5g025290 | 30.994 | 342 | 217 | 6 | 10 | 337 | 8 | 344 | 3.91e-47 | 166 |
| MS.gene88405.t1 | MTR_5g025290 | 30.994 | 342 | 217 | 6 | 10 | 337 | 36 | 372 | 5.43e-47 | 166 |
| MS.gene88405.t1 | MTR_6g007743 | 30.769 | 325 | 205 | 6 | 33 | 347 | 32 | 346 | 6.01e-47 | 164 |
| MS.gene88405.t1 | MTR_6g007760 | 31.429 | 315 | 209 | 5 | 3 | 316 | 1 | 309 | 9.66e-47 | 162 |
| MS.gene88405.t1 | MTR_5g025400 | 31.858 | 339 | 216 | 3 | 12 | 337 | 10 | 346 | 7.97e-46 | 162 |
| MS.gene88405.t1 | MTR_5g089390 | 29.907 | 321 | 213 | 4 | 17 | 336 | 18 | 327 | 8.09e-46 | 161 |
| MS.gene88405.t1 | MTR_5g025370 | 30.499 | 341 | 222 | 3 | 10 | 337 | 7 | 345 | 8.40e-46 | 162 |
| MS.gene88405.t1 | MTR_5g021160 | 33.588 | 262 | 167 | 4 | 90 | 350 | 1 | 256 | 2.29e-45 | 158 |
| MS.gene88405.t1 | MTR_0103s0090 | 35.857 | 251 | 149 | 6 | 96 | 343 | 3 | 244 | 4.75e-45 | 157 |
| MS.gene88405.t1 | MTR_5g034970 | 31.915 | 329 | 190 | 7 | 17 | 337 | 11 | 313 | 6.01e-45 | 158 |
| MS.gene88405.t1 | MTR_5g025330 | 31.858 | 339 | 212 | 5 | 13 | 337 | 9 | 342 | 1.53e-44 | 162 |
| MS.gene88405.t1 | MTR_4g094340 | 35.907 | 259 | 155 | 7 | 10 | 264 | 6 | 257 | 1.66e-44 | 155 |
| MS.gene88405.t1 | MTR_4g094340 | 36.226 | 265 | 157 | 8 | 5 | 264 | 18 | 275 | 3.00e-44 | 155 |
| MS.gene88405.t1 | MTR_6g007750 | 31.875 | 320 | 205 | 6 | 33 | 348 | 32 | 342 | 3.71e-44 | 157 |
| MS.gene88405.t1 | MTR_4g094360 | 34.496 | 258 | 161 | 5 | 90 | 345 | 44 | 295 | 5.32e-44 | 156 |
| MS.gene88405.t1 | MTR_5g021160 | 34.572 | 269 | 168 | 4 | 10 | 274 | 4 | 268 | 1.72e-43 | 153 |
| MS.gene88405.t1 | MTR_1g051120 | 34.951 | 206 | 130 | 1 | 9 | 214 | 12 | 213 | 5.23e-43 | 150 |
| MS.gene88405.t1 | MTR_8g092650 | 33.891 | 239 | 149 | 4 | 112 | 345 | 26 | 260 | 5.79e-43 | 151 |
| MS.gene88405.t1 | MTR_6g007740 | 30.060 | 336 | 215 | 7 | 22 | 347 | 21 | 346 | 1.45e-42 | 155 |
| MS.gene88405.t1 | MTR_6g007747 | 31.034 | 319 | 204 | 5 | 33 | 348 | 32 | 337 | 1.83e-42 | 152 |
| MS.gene88405.t1 | MTR_1g051120 | 35.961 | 203 | 126 | 1 | 9 | 211 | 12 | 210 | 1.84e-42 | 150 |
| MS.gene88405.t1 | MTR_1g052205 | 36.245 | 229 | 121 | 6 | 124 | 344 | 11 | 222 | 2.90e-42 | 149 |
| MS.gene88405.t1 | MTR_3g112480 | 34.956 | 226 | 137 | 2 | 121 | 337 | 1 | 225 | 4.72e-41 | 146 |
| MS.gene88405.t1 | MTR_8g006090 | 38.346 | 266 | 152 | 6 | 11 | 272 | 6 | 263 | 5.75e-40 | 144 |
| MS.gene88405.t1 | MTR_8g072350 | 28.024 | 339 | 225 | 5 | 13 | 337 | 9 | 342 | 1.85e-39 | 145 |
| MS.gene88405.t1 | MTR_3g095440 | 34.646 | 254 | 159 | 4 | 15 | 264 | 7 | 257 | 2.64e-39 | 141 |
| MS.gene88405.t1 | MTR_4g129650 | 33.617 | 235 | 142 | 4 | 110 | 341 | 1 | 224 | 4.44e-39 | 141 |
| MS.gene88405.t1 | MTR_2g102340 | 31.298 | 262 | 161 | 5 | 10 | 264 | 35 | 284 | 1.18e-38 | 141 |
| MS.gene88405.t1 | MTR_6g007753 | 30.690 | 290 | 188 | 5 | 63 | 348 | 343 | 623 | 1.64e-37 | 144 |
| MS.gene88405.t1 | MTR_6g007753 | 30.493 | 223 | 147 | 3 | 126 | 348 | 85 | 299 | 2.29e-26 | 111 |
| MS.gene88405.t1 | MTR_6g007757 | 30.091 | 329 | 215 | 6 | 18 | 342 | 17 | 334 | 3.45e-37 | 139 |
| MS.gene88405.t1 | MTR_4g100840 | 28.333 | 360 | 225 | 11 | 1 | 343 | 2 | 345 | 2.01e-34 | 130 |
| MS.gene88405.t1 | MTR_8g076800 | 59.259 | 108 | 42 | 2 | 180 | 287 | 139 | 244 | 5.34e-34 | 127 |
| MS.gene88405.t1 | MTR_4g094342 | 35.754 | 179 | 108 | 2 | 6 | 178 | 6 | 183 | 2.65e-32 | 122 |
| MS.gene88405.t1 | MTR_5g034980 | 28.986 | 276 | 169 | 8 | 16 | 283 | 10 | 266 | 1.13e-31 | 122 |
| MS.gene88405.t1 | MTR_4g094340 | 36.019 | 211 | 124 | 7 | 5 | 210 | 18 | 222 | 1.49e-30 | 117 |
| MS.gene88405.t1 | MTR_5g012650 | 29.204 | 339 | 213 | 9 | 10 | 336 | 5 | 328 | 4.61e-30 | 119 |
| MS.gene88405.t1 | MTR_6g007470 | 56.322 | 87 | 37 | 1 | 201 | 287 | 99 | 184 | 2.32e-26 | 105 |
| MS.gene88405.t1 | MTR_1g068720 | 40.268 | 149 | 78 | 5 | 208 | 346 | 93 | 240 | 6.75e-26 | 105 |
| MS.gene88405.t1 | MTR_1g068720 | 44.872 | 78 | 43 | 0 | 9 | 86 | 10 | 87 | 6.21e-15 | 74.3 |
| MS.gene88405.t1 | MTR_1g014790 | 35.252 | 139 | 86 | 2 | 86 | 224 | 36 | 170 | 3.28e-24 | 99.4 |
| MS.gene88405.t1 | MTR_8g006090 | 38.624 | 189 | 108 | 4 | 84 | 272 | 3 | 183 | 9.11e-24 | 98.6 |
| MS.gene88405.t1 | MTR_6g007757 | 26.721 | 247 | 166 | 6 | 18 | 260 | 17 | 252 | 7.21e-23 | 97.4 |
| MS.gene88405.t1 | MTR_4g094348 | 33.858 | 127 | 77 | 2 | 93 | 213 | 2 | 127 | 2.67e-17 | 79.7 |
| MS.gene88405.t1 | MTR_3g093450 | 27.586 | 203 | 93 | 7 | 146 | 339 | 25 | 182 | 5.34e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88405.t1 | AT5G07050 | 63.480 | 408 | 134 | 5 | 1 | 400 | 1 | 401 | 0.0 | 514 |
| MS.gene88405.t1 | AT2G40900 | 52.747 | 364 | 154 | 5 | 10 | 367 | 7 | 358 | 6.36e-139 | 402 |
| MS.gene88405.t1 | AT3G56620 | 55.077 | 325 | 137 | 3 | 10 | 334 | 7 | 322 | 1.94e-128 | 375 |
| MS.gene88405.t1 | AT1G21890 | 47.594 | 374 | 182 | 5 | 10 | 372 | 7 | 377 | 1.10e-116 | 345 |
| MS.gene88405.t1 | AT2G39510 | 45.833 | 384 | 188 | 8 | 8 | 388 | 2 | 368 | 2.04e-113 | 336 |
| MS.gene88405.t1 | AT2G37460 | 46.505 | 372 | 181 | 6 | 3 | 370 | 4 | 361 | 5.36e-112 | 333 |
| MS.gene88405.t1 | AT1G44800 | 46.269 | 335 | 175 | 2 | 5 | 339 | 2 | 331 | 8.67e-111 | 330 |
| MS.gene88405.t1 | AT4G08300 | 43.236 | 377 | 204 | 5 | 5 | 377 | 2 | 372 | 2.06e-107 | 321 |
| MS.gene88405.t1 | AT4G08290 | 45.015 | 331 | 179 | 2 | 6 | 336 | 5 | 332 | 8.94e-105 | 315 |
| MS.gene88405.t1 | AT1G21890 | 50.000 | 310 | 149 | 2 | 10 | 314 | 7 | 315 | 8.49e-104 | 311 |
| MS.gene88405.t1 | AT5G13670 | 42.553 | 376 | 196 | 7 | 9 | 381 | 3 | 361 | 1.63e-99 | 301 |
| MS.gene88405.t1 | AT2G37450 | 44.688 | 320 | 148 | 4 | 18 | 336 | 13 | 304 | 3.80e-84 | 260 |
| MS.gene88405.t1 | AT1G75500 | 38.095 | 378 | 211 | 6 | 10 | 368 | 16 | 389 | 3.07e-81 | 254 |
| MS.gene88405.t1 | AT1G75500 | 38.095 | 378 | 211 | 6 | 10 | 368 | 16 | 389 | 3.07e-81 | 254 |
| MS.gene88405.t1 | AT1G09380 | 38.298 | 329 | 192 | 4 | 10 | 333 | 4 | 326 | 6.32e-81 | 253 |
| MS.gene88405.t1 | AT3G18200 | 40.059 | 337 | 191 | 5 | 3 | 337 | 24 | 351 | 3.02e-76 | 241 |
| MS.gene88405.t1 | AT4G08290 | 41.473 | 258 | 148 | 2 | 6 | 263 | 5 | 259 | 2.33e-72 | 228 |
| MS.gene88405.t1 | AT4G30420 | 37.576 | 330 | 198 | 4 | 10 | 336 | 5 | 329 | 1.57e-71 | 229 |
| MS.gene88405.t1 | AT4G30420 | 37.771 | 323 | 193 | 4 | 17 | 336 | 2 | 319 | 6.87e-71 | 227 |
| MS.gene88405.t1 | AT3G30340 | 36.061 | 330 | 205 | 3 | 21 | 349 | 18 | 342 | 2.52e-70 | 226 |
| MS.gene88405.t1 | AT5G64700 | 34.985 | 343 | 215 | 3 | 10 | 347 | 4 | 343 | 2.31e-69 | 223 |
| MS.gene88405.t1 | AT3G53210 | 36.280 | 328 | 205 | 2 | 10 | 337 | 6 | 329 | 4.27e-68 | 220 |
| MS.gene88405.t1 | AT1G25270 | 35.583 | 326 | 207 | 3 | 12 | 337 | 1 | 323 | 9.67e-64 | 208 |
| MS.gene88405.t1 | AT1G43650 | 35.562 | 329 | 203 | 4 | 13 | 340 | 6 | 326 | 7.55e-62 | 203 |
| MS.gene88405.t1 | AT1G68170 | 35.366 | 328 | 210 | 2 | 9 | 336 | 8 | 333 | 1.28e-61 | 203 |
| MS.gene88405.t1 | AT1G68170 | 35.692 | 325 | 207 | 2 | 12 | 336 | 1 | 323 | 1.60e-61 | 202 |
| MS.gene88405.t1 | AT2G37450 | 44.351 | 239 | 125 | 3 | 99 | 336 | 1 | 232 | 1.14e-60 | 197 |
| MS.gene88405.t1 | AT4G28040 | 33.134 | 335 | 202 | 7 | 13 | 343 | 7 | 323 | 2.60e-60 | 199 |
| MS.gene88405.t1 | AT4G28040 | 33.134 | 335 | 202 | 7 | 13 | 343 | 7 | 323 | 2.60e-60 | 199 |
| MS.gene88405.t1 | AT4G28040 | 33.134 | 335 | 202 | 7 | 13 | 343 | 7 | 323 | 2.60e-60 | 199 |
| MS.gene88405.t1 | AT4G28040 | 33.134 | 335 | 202 | 7 | 13 | 343 | 7 | 323 | 2.60e-60 | 199 |
| MS.gene88405.t1 | AT4G28040 | 33.134 | 335 | 202 | 7 | 13 | 343 | 7 | 323 | 2.60e-60 | 199 |
| MS.gene88405.t1 | AT4G01440 | 34.277 | 318 | 199 | 4 | 29 | 342 | 25 | 336 | 2.32e-59 | 197 |
| MS.gene88405.t1 | AT4G01430 | 30.791 | 354 | 231 | 7 | 26 | 377 | 21 | 362 | 3.40e-54 | 184 |
| MS.gene88405.t1 | AT5G40210 | 35.542 | 332 | 186 | 7 | 16 | 345 | 15 | 320 | 4.52e-54 | 182 |
| MS.gene88405.t1 | AT1G01070 | 31.875 | 320 | 213 | 3 | 18 | 336 | 20 | 335 | 4.68e-52 | 178 |
| MS.gene88405.t1 | AT4G01440 | 33.449 | 287 | 184 | 3 | 29 | 314 | 25 | 305 | 5.47e-52 | 176 |
| MS.gene88405.t1 | AT1G11450 | 32.298 | 322 | 207 | 4 | 18 | 336 | 20 | 333 | 4.70e-51 | 175 |
| MS.gene88405.t1 | AT5G40240 | 31.045 | 335 | 225 | 5 | 10 | 342 | 16 | 346 | 2.34e-50 | 174 |
| MS.gene88405.t1 | AT5G40240 | 31.045 | 335 | 225 | 5 | 10 | 342 | 16 | 346 | 2.34e-50 | 174 |
| MS.gene88405.t1 | AT5G40240 | 31.045 | 335 | 225 | 5 | 10 | 342 | 30 | 360 | 3.09e-50 | 174 |
| MS.gene88405.t1 | AT2G37450 | 43.868 | 212 | 111 | 3 | 126 | 336 | 61 | 265 | 5.52e-50 | 171 |
| MS.gene88405.t1 | AT2G37450 | 63.265 | 49 | 18 | 0 | 18 | 66 | 13 | 61 | 1.01e-12 | 68.9 |
| MS.gene88405.t1 | AT3G28050 | 30.124 | 322 | 215 | 4 | 16 | 336 | 14 | 326 | 6.82e-50 | 172 |
| MS.gene88405.t1 | AT1G11460 | 31.579 | 323 | 209 | 5 | 18 | 336 | 20 | 334 | 4.27e-49 | 169 |
| MS.gene88405.t1 | AT3G28100 | 32.219 | 329 | 212 | 6 | 16 | 340 | 16 | 337 | 5.41e-49 | 169 |
| MS.gene88405.t1 | AT5G40230 | 31.737 | 334 | 224 | 4 | 10 | 342 | 17 | 347 | 5.57e-49 | 170 |
| MS.gene88405.t1 | AT3G53210 | 36.290 | 248 | 154 | 2 | 90 | 337 | 29 | 272 | 9.06e-48 | 165 |
| MS.gene88405.t1 | AT3G53210 | 35.391 | 243 | 153 | 2 | 10 | 252 | 6 | 244 | 1.12e-46 | 161 |
| MS.gene88405.t1 | AT1G11450 | 33.219 | 292 | 184 | 4 | 48 | 336 | 6 | 289 | 1.32e-46 | 162 |
| MS.gene88405.t1 | AT1G70260 | 27.011 | 348 | 245 | 4 | 3 | 344 | 1 | 345 | 5.63e-46 | 162 |
| MS.gene88405.t1 | AT3G30340 | 34.351 | 262 | 163 | 4 | 18 | 278 | 15 | 268 | 7.42e-46 | 159 |
| MS.gene88405.t1 | AT1G11450 | 32.872 | 289 | 183 | 4 | 51 | 336 | 2 | 282 | 5.56e-45 | 157 |
| MS.gene88405.t1 | AT3G18200 | 38.696 | 230 | 130 | 5 | 110 | 337 | 1 | 221 | 9.22e-45 | 155 |
| MS.gene88405.t1 | AT4G01430 | 31.597 | 288 | 192 | 3 | 29 | 314 | 24 | 308 | 1.29e-44 | 157 |
| MS.gene88405.t1 | AT4G15540 | 30.058 | 346 | 221 | 5 | 4 | 344 | 3 | 332 | 2.25e-44 | 157 |
| MS.gene88405.t1 | AT4G15540 | 30.058 | 346 | 221 | 5 | 4 | 344 | 3 | 332 | 2.25e-44 | 157 |
| MS.gene88405.t1 | AT1G01070 | 31.399 | 293 | 195 | 4 | 45 | 336 | 1 | 288 | 3.74e-44 | 156 |
| MS.gene88405.t1 | AT5G45370 | 30.383 | 339 | 223 | 4 | 10 | 337 | 16 | 352 | 4.63e-44 | 157 |
| MS.gene88405.t1 | AT5G45370 | 30.383 | 339 | 223 | 4 | 10 | 337 | 16 | 352 | 4.63e-44 | 157 |
| MS.gene88405.t1 | AT5G64700 | 32.692 | 260 | 167 | 3 | 10 | 264 | 4 | 260 | 5.96e-44 | 154 |
| MS.gene88405.t1 | AT5G45370 | 30.488 | 328 | 213 | 3 | 10 | 337 | 16 | 328 | 1.72e-43 | 155 |
| MS.gene88405.t1 | AT3G28130 | 31.173 | 324 | 214 | 7 | 16 | 336 | 15 | 332 | 2.89e-43 | 154 |
| MS.gene88405.t1 | AT3G28070 | 30.488 | 328 | 219 | 5 | 16 | 340 | 19 | 340 | 7.52e-43 | 154 |
| MS.gene88405.t1 | AT3G28070 | 33.061 | 245 | 161 | 2 | 96 | 340 | 7 | 248 | 1.16e-42 | 150 |
| MS.gene88405.t1 | AT3G45870 | 29.762 | 336 | 227 | 3 | 3 | 331 | 1 | 334 | 7.83e-42 | 151 |
| MS.gene88405.t1 | AT4G01440 | 33.755 | 237 | 150 | 3 | 29 | 264 | 25 | 255 | 1.18e-41 | 148 |
| MS.gene88405.t1 | AT1G11450 | 30.667 | 300 | 197 | 4 | 18 | 314 | 20 | 311 | 2.52e-41 | 148 |
| MS.gene88405.t1 | AT5G47470 | 30.114 | 352 | 207 | 10 | 5 | 339 | 21 | 350 | 3.61e-41 | 149 |
| MS.gene88405.t1 | AT5G47470 | 30.114 | 352 | 207 | 10 | 5 | 339 | 49 | 378 | 4.92e-41 | 149 |
| MS.gene88405.t1 | AT3G28080 | 30.675 | 326 | 215 | 6 | 16 | 337 | 16 | 334 | 5.00e-41 | 149 |
| MS.gene88405.t1 | AT5G47470 | 30.114 | 352 | 207 | 10 | 5 | 339 | 49 | 378 | 5.05e-41 | 149 |
| MS.gene88405.t1 | AT4G24980 | 29.032 | 310 | 149 | 6 | 28 | 337 | 1 | 239 | 1.86e-39 | 142 |
| MS.gene88405.t1 | AT4G01450 | 32.198 | 323 | 207 | 5 | 26 | 346 | 21 | 333 | 1.86e-39 | 144 |
| MS.gene88405.t1 | AT3G28130 | 33.745 | 243 | 154 | 5 | 96 | 336 | 9 | 246 | 1.89e-39 | 142 |
| MS.gene88405.t1 | AT3G28130 | 33.745 | 243 | 154 | 5 | 96 | 336 | 9 | 246 | 1.89e-39 | 142 |
| MS.gene88405.t1 | AT3G28080 | 32.780 | 241 | 157 | 3 | 98 | 337 | 9 | 245 | 2.38e-39 | 142 |
| MS.gene88405.t1 | AT3G28080 | 32.780 | 241 | 157 | 3 | 98 | 337 | 9 | 245 | 2.38e-39 | 142 |
| MS.gene88405.t1 | AT3G28080 | 32.780 | 241 | 157 | 3 | 98 | 337 | 9 | 245 | 2.38e-39 | 142 |
| MS.gene88405.t1 | AT3G28080 | 32.780 | 241 | 157 | 3 | 98 | 337 | 9 | 245 | 2.38e-39 | 142 |
| MS.gene88405.t1 | AT3G28080 | 32.780 | 241 | 157 | 3 | 98 | 337 | 90 | 326 | 2.48e-38 | 141 |
| MS.gene88405.t1 | AT4G19185 | 29.641 | 334 | 222 | 5 | 15 | 337 | 22 | 353 | 1.16e-36 | 138 |
| MS.gene88405.t1 | AT4G01440 | 32.328 | 232 | 147 | 4 | 115 | 342 | 3 | 228 | 4.48e-36 | 133 |
| MS.gene88405.t1 | AT4G01440 | 32.328 | 232 | 147 | 4 | 115 | 342 | 3 | 228 | 4.48e-36 | 133 |
| MS.gene88405.t1 | AT4G01450 | 31.271 | 291 | 188 | 5 | 26 | 314 | 21 | 301 | 9.47e-36 | 134 |
| MS.gene88405.t1 | AT3G45870 | 28.840 | 319 | 218 | 3 | 3 | 314 | 1 | 317 | 2.67e-35 | 132 |
| MS.gene88405.t1 | AT1G43650 | 31.349 | 252 | 165 | 3 | 13 | 264 | 6 | 249 | 4.87e-35 | 130 |
| MS.gene88405.t1 | AT1G11450 | 31.452 | 248 | 159 | 4 | 92 | 336 | 2 | 241 | 2.32e-34 | 128 |
| MS.gene88405.t1 | AT4G16620 | 29.191 | 346 | 199 | 7 | 22 | 344 | 20 | 342 | 3.26e-33 | 127 |
| MS.gene88405.t1 | AT3G28070 | 29.139 | 302 | 205 | 5 | 16 | 314 | 19 | 314 | 1.08e-32 | 125 |
| MS.gene88405.t1 | AT4G01450 | 33.480 | 227 | 139 | 5 | 26 | 250 | 21 | 237 | 1.14e-32 | 124 |
| MS.gene88405.t1 | AT4G01450 | 34.300 | 207 | 125 | 4 | 26 | 230 | 21 | 218 | 6.28e-31 | 119 |
| MS.gene88405.t1 | AT3G28070 | 31.776 | 214 | 143 | 2 | 127 | 340 | 1 | 211 | 1.44e-30 | 117 |
| MS.gene88405.t1 | AT3G28100 | 31.855 | 248 | 159 | 5 | 16 | 259 | 16 | 257 | 2.71e-30 | 117 |
| MS.gene88405.t1 | AT1G60050 | 25.073 | 343 | 247 | 6 | 9 | 343 | 8 | 348 | 5.16e-30 | 119 |
| MS.gene88405.t1 | AT3G45870 | 29.572 | 257 | 173 | 2 | 3 | 252 | 1 | 256 | 1.65e-29 | 115 |
| MS.gene88405.t1 | AT3G28130 | 33.019 | 212 | 135 | 5 | 127 | 336 | 1 | 207 | 2.30e-28 | 111 |
| MS.gene88405.t1 | AT3G28080 | 28.049 | 328 | 167 | 9 | 16 | 337 | 16 | 280 | 4.32e-28 | 112 |
| MS.gene88405.t1 | AT3G28080 | 31.604 | 212 | 140 | 3 | 127 | 337 | 1 | 208 | 4.69e-28 | 110 |
| MS.gene88405.t1 | AT4G01430 | 28.692 | 237 | 156 | 6 | 142 | 377 | 1 | 225 | 1.42e-27 | 109 |
| MS.gene88405.t1 | AT4G19185 | 27.907 | 258 | 173 | 5 | 91 | 337 | 20 | 275 | 7.97e-27 | 109 |
| MS.gene88405.t1 | AT5G45370 | 29.482 | 251 | 164 | 4 | 98 | 337 | 2 | 250 | 8.23e-27 | 108 |
| MS.gene88405.t1 | AT5G45370 | 29.482 | 251 | 164 | 4 | 98 | 337 | 2 | 250 | 8.23e-27 | 108 |
| MS.gene88405.t1 | AT3G28080 | 29.218 | 243 | 109 | 6 | 98 | 337 | 9 | 191 | 3.50e-26 | 105 |
| MS.gene88405.t1 | AT4G16620 | 29.851 | 268 | 143 | 6 | 99 | 344 | 1 | 245 | 1.50e-23 | 99.4 |
| MS.gene88405.t1 | AT4G16620 | 29.851 | 268 | 143 | 6 | 99 | 344 | 1 | 245 | 1.50e-23 | 99.4 |
| MS.gene88405.t1 | AT3G28130 | 28.629 | 248 | 169 | 6 | 16 | 260 | 15 | 257 | 1.74e-23 | 99.0 |
| MS.gene88405.t1 | AT3G28100 | 32.673 | 202 | 126 | 5 | 16 | 213 | 16 | 211 | 2.17e-23 | 98.6 |
| MS.gene88405.t1 | AT3G45870 | 28.511 | 235 | 158 | 4 | 105 | 331 | 27 | 259 | 4.86e-23 | 99.0 |
| MS.gene88405.t1 | AT4G16620 | 28.632 | 234 | 133 | 4 | 22 | 241 | 20 | 233 | 6.38e-21 | 92.0 |
| MS.gene88405.t1 | AT3G28130 | 30.097 | 206 | 137 | 5 | 16 | 219 | 15 | 215 | 3.64e-19 | 85.9 |
| MS.gene88405.t1 | AT5G45370 | 28.054 | 221 | 146 | 4 | 128 | 337 | 74 | 292 | 2.23e-18 | 85.9 |
| MS.gene88405.t1 | AT3G45870 | 27.064 | 218 | 149 | 4 | 105 | 314 | 27 | 242 | 6.24e-17 | 80.5 |
| MS.gene88405.t1 | AT3G45870 | 27.064 | 218 | 149 | 4 | 105 | 314 | 27 | 242 | 6.24e-17 | 80.5 |
| MS.gene88405.t1 | AT3G45870 | 27.273 | 165 | 118 | 2 | 167 | 331 | 21 | 183 | 1.53e-12 | 67.4 |
| MS.gene88405.t1 | AT3G45870 | 27.564 | 156 | 104 | 3 | 105 | 252 | 27 | 181 | 3.90e-11 | 62.8 |
Find 81 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATTTGAGCACCCTTTAT+TGG | 0.161865 | 8.3:+56890526 | None:intergenic |
| GCTATGATATGTTTACAATT+TGG | 0.247586 | 8.3:-56893120 | MS.gene88405:CDS |
| AAAATTCGGAATGTTATCTT+AGG | 0.260272 | 8.3:+56892880 | None:intergenic |
| TGATATTCCTTTGCCAATAA+AGG | 0.262662 | 8.3:-56890539 | MS.gene88405:CDS |
| GGTGCCATCTTGATTGTTAT+AGG | 0.303386 | 8.3:-56890616 | MS.gene88405:CDS |
| ACTTCACTTGTGGTCTTCAT+TGG | 0.318744 | 8.3:-56891456 | MS.gene88405:CDS |
| TGAAAATTTGCAAGAAAATT+CGG | 0.322415 | 8.3:+56892866 | None:intergenic |
| TTATCATTGCCACCTTTGCT+TGG | 0.363715 | 8.3:-56891689 | MS.gene88405:CDS |
| GATCAAAATTTCTATTATGC+TGG | 0.374704 | 8.3:-56892541 | MS.gene88405:CDS |
| CAGGATCTTCTGAAAGAGAT+TGG | 0.374788 | 8.3:-56891731 | MS.gene88405:CDS |
| GATATTCCTTTGCCAATAAA+GGG | 0.379436 | 8.3:-56890538 | MS.gene88405:CDS |
| TATCATTGCCACCTTTGCTT+GGG | 0.380505 | 8.3:-56891688 | MS.gene88405:CDS |
| ATGCTAATGACATTATATAA+AGG | 0.391959 | 8.3:-56891822 | MS.gene88405:CDS |
| AATCTGTTCTGCAAGGATAA+AGG | 0.397927 | 8.3:+56890827 | None:intergenic |
| TGTTTACAATTTGGCTATGC+TGG | 0.398259 | 8.3:-56893111 | MS.gene88405:CDS |
| ATGTACAAGGGCTAGTGATT+AGG | 0.401274 | 8.3:-56890917 | MS.gene88405:CDS |
| GCTCAAATGAGTGGAAATTC+AGG | 0.402269 | 8.3:-56890514 | MS.gene88405:CDS |
| GATGATCATTGTTGCAATCA+TGG | 0.415373 | 8.3:-56890853 | MS.gene88405:CDS |
| AGGCTTATATTCTGTTCTGT+GGG | 0.424027 | 8.3:-56890596 | MS.gene88405:CDS |
| ATCAAAATTTCTATTATGCT+GGG | 0.431799 | 8.3:-56892540 | MS.gene88405:CDS |
| CTTCTGTATGGAGGATTGGT+TGG | 0.434265 | 8.3:-56891389 | MS.gene88405:CDS |
| CTCTCAAACATAAATGCAAA+TGG | 0.436031 | 8.3:+56892994 | None:intergenic |
| GTCCTATTGTGGAGATGGTA+TGG | 0.436646 | 8.3:-56891800 | MS.gene88405:CDS |
| GAGGTGCCAAGCAAAGATAT+TGG | 0.444722 | 8.3:-56891871 | MS.gene88405:CDS |
| AGGTGCCAAGCAAAGATATT+GGG | 0.448969 | 8.3:-56891870 | MS.gene88405:CDS |
| TTCTGTATGGAGGATTGGTT+GGG | 0.458140 | 8.3:-56891388 | MS.gene88405:CDS |
| GCCCATACCATCTCCACAAT+AGG | 0.458933 | 8.3:+56891798 | None:intergenic |
| TTAGTAGTAGGCTCTCTAGT+AGG | 0.465178 | 8.3:+56890406 | None:intergenic |
| GATCCTTCTGTATGGAGGAT+TGG | 0.467856 | 8.3:-56891393 | MS.gene88405:CDS |
| TTCGGAATGTTATCTTAGGT+TGG | 0.479766 | 8.3:+56892884 | None:intergenic |
| TAGGCTTATATTCTGTTCTG+TGG | 0.482561 | 8.3:-56890597 | MS.gene88405:CDS |
| AACTGAAGAAAGCATGTTGT+TGG | 0.484273 | 8.3:+56890441 | None:intergenic |
| GGACATAGTGGCTCATTCCT+TGG | 0.492407 | 8.3:+56893058 | None:intergenic |
| CTGAGCATGATCCTTCTGTA+TGG | 0.494380 | 8.3:-56891401 | MS.gene88405:CDS |
| CTTGCAGAACAGATTTACTC+TGG | 0.496224 | 8.3:-56890819 | MS.gene88405:CDS |
| GATCATCATAAGTGGGCTAA+AGG | 0.497400 | 8.3:+56890869 | None:intergenic |
| GGGAATTGTGACCTCAAGCT+TGG | 0.497579 | 8.3:-56890946 | MS.gene88405:CDS |
| CATTTGCATTTATGTTTGAG+AGG | 0.499498 | 8.3:-56892993 | MS.gene88405:intron |
| CTAAAGGCAGTTGCAAAGAC+AGG | 0.501855 | 8.3:+56890885 | None:intergenic |
| CTCATTGCACAAGAGAAGGT+TGG | 0.503653 | 8.3:+56892502 | None:intergenic |
| CTATGTGGGTGCAGTGTGAT+GGG | 0.505357 | 8.3:-56890637 | MS.gene88405:intron |
| TGGTATGAACATTATCACTA+AGG | 0.506134 | 8.3:-56893091 | MS.gene88405:CDS |
| GCCATCACAAAAGTCATGGC+TGG | 0.507574 | 8.3:+56892469 | None:intergenic |
| ACTATGTGGGTGCAGTGTGA+TGG | 0.518714 | 8.3:-56890638 | MS.gene88405:intron |
| GCAACAATGATCATCATAAG+TGG | 0.519358 | 8.3:+56890861 | None:intergenic |
| TGAGCACCCTTTATTGGCAA+AGG | 0.522528 | 8.3:+56890532 | None:intergenic |
| AGCTTGGCATACTATGTACA+AGG | 0.527654 | 8.3:-56890930 | MS.gene88405:CDS |
| TAAAGGTCCTATTGTGGAGA+TGG | 0.529191 | 8.3:-56891805 | MS.gene88405:CDS |
| TTGTTCCCAATATCTTTGCT+TGG | 0.531263 | 8.3:+56891865 | None:intergenic |
| GGGCTAGTGATTAGGAAGAA+AGG | 0.551748 | 8.3:-56890909 | MS.gene88405:CDS |
| CAGAACAGATTTACTCTGGA+GGG | 0.561325 | 8.3:-56890815 | MS.gene88405:intron |
| ATCTCTTTCAGAAGATCCTG+TGG | 0.563505 | 8.3:+56891734 | None:intergenic |
| GATAAACGACGAGGACATAG+TGG | 0.564461 | 8.3:+56893046 | None:intergenic |
| ATGGAAGATCCTTACAGCAT+AGG | 0.565176 | 8.3:+56891344 | None:intergenic |
| ATGATCATTGTTGCAATCAT+GGG | 0.565857 | 8.3:-56890852 | MS.gene88405:CDS |
| AGACTAACCCAAGAAGAGCT+AGG | 0.568023 | 8.3:+56892842 | None:intergenic |
| TCCTATTGTGGAGATGGTAT+GGG | 0.568336 | 8.3:-56891799 | MS.gene88405:CDS |
| TAAGCCTATAACAATCAAGA+TGG | 0.569495 | 8.3:+56890612 | None:intergenic |
| TGTTCTGTGGGGCAAGCACA+AGG | 0.574359 | 8.3:-56890584 | MS.gene88405:CDS |
| GTTGCTCATTGCACAAGAGA+AGG | 0.578267 | 8.3:+56892498 | None:intergenic |
| GTAATGCTTCATGTTCTCAA+AGG | 0.583502 | 8.3:+56893146 | None:intergenic |
| GAGTGAAGCCCAAGCAAAGG+TGG | 0.584171 | 8.3:+56891680 | None:intergenic |
| AACTGCCATCACAAAAGTCA+TGG | 0.584413 | 8.3:+56892465 | None:intergenic |
| ATTATATAAAGGTCCTATTG+TGG | 0.588030 | 8.3:-56891811 | MS.gene88405:CDS |
| ACTAAGTCTTACTTCACTTG+TGG | 0.588891 | 8.3:-56891466 | MS.gene88405:CDS |
| CAACAATGATCATCATAAGT+GGG | 0.593912 | 8.3:+56890862 | None:intergenic |
| ACACATGAAACAACAACCAC+AGG | 0.596729 | 8.3:-56891750 | MS.gene88405:CDS |
| CAGAGTAAATCTGTTCTGCA+AGG | 0.604588 | 8.3:+56890820 | None:intergenic |
| TACATAGTATGCCAAGCTTG+AGG | 0.608423 | 8.3:+56890935 | None:intergenic |
| AAAGAGTGAAGCCCAAGCAA+AGG | 0.613193 | 8.3:+56891677 | None:intergenic |
| CAACCAATCCTCCATACAGA+AGG | 0.614105 | 8.3:+56891390 | None:intergenic |
| TAGAAGCAGTTGCAAAAGCG+TGG | 0.617111 | 8.3:+56893022 | None:intergenic |
| ATAAAGGGTGCTCAAATGAG+TGG | 0.625024 | 8.3:-56890523 | MS.gene88405:CDS |
| AGATAAACATAAAGCAAGTG+AGG | 0.626481 | 8.3:-56891890 | MS.gene88405:CDS |
| AGCATGATCCTTCTGTATGG+AGG | 0.629537 | 8.3:-56891398 | MS.gene88405:CDS |
| GCAGAACAGATTTACTCTGG+AGG | 0.643564 | 8.3:-56890816 | MS.gene88405:CDS |
| GGCTTATATTCTGTTCTGTG+GGG | 0.648388 | 8.3:-56890595 | MS.gene88405:CDS |
| ACTAAGGTTTCTCTCAACCA+AGG | 0.665839 | 8.3:-56893075 | MS.gene88405:CDS |
| GACACAGATCAAGTAAAACA+TGG | 0.688084 | 8.3:-56890478 | MS.gene88405:CDS |
| GCTTGGCATACTATGTACAA+GGG | 0.751986 | 8.3:-56890929 | MS.gene88405:CDS |
| AAGCGTGGCGATAAACGACG+AGG | 0.774739 | 8.3:+56893037 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAGAGATTATTAATTAAT+TGG | + | chr8.3:56891267-56891286 | None:intergenic | 10.0% |
| !!! | AAAGATAAAAACATTTTTTT+AGG | + | chr8.3:56892249-56892268 | None:intergenic | 10.0% |
| !!! | TTTTGTTTTTAAATATGAAA+AGG | - | chr8.3:56891635-56891654 | MS.gene88405:intron | 10.0% |
| !!! | TTTTTTATTATCTTTGAAAA+GGG | - | chr8.3:56890828-56890847 | MS.gene88405:CDS | 10.0% |
| !! | AATAGTGAAGTAAAATAAAA+AGG | - | chr8.3:56891430-56891449 | MS.gene88405:CDS | 15.0% |
| !! | ATAGTGAAGTAAAATAAAAA+GGG | - | chr8.3:56891431-56891450 | MS.gene88405:CDS | 15.0% |
| !! | TTCAAAAAATTGTCAAAAAA+TGG | + | chr8.3:56892440-56892459 | None:intergenic | 15.0% |
| !!! | CAAAATTCAGATTATTTTAA+GGG | - | chr8.3:56891129-56891148 | MS.gene88405:intron | 15.0% |
| !!! | GTTTTTTATTATCTTTGAAA+AGG | - | chr8.3:56890827-56890846 | MS.gene88405:CDS | 15.0% |
| !!! | TTTTTGTGCAAATTATTAAT+TGG | - | chr8.3:56892029-56892048 | MS.gene88405:intron | 15.0% |
| !! | AATTAATATGCTAACTCTTA+TGG | - | chr8.3:56890628-56890647 | MS.gene88405:intron | 20.0% |
| !! | AGACAATATTATGTAGAAAA+TGG | - | chr8.3:56891166-56891185 | MS.gene88405:intron | 20.0% |
| !! | ATCAAAATTTCTATTATGCT+GGG | - | chr8.3:56891015-56891034 | MS.gene88405:intron | 20.0% |
| !! | ATGCTAATGACATTATATAA+AGG | - | chr8.3:56891733-56891752 | MS.gene88405:CDS | 20.0% |
| !! | TGAAAATTTGCAAGAAAATT+CGG | + | chr8.3:56890692-56890711 | None:intergenic | 20.0% |
| !! | TGACAAAAATTAATACAAGT+TGG | + | chr8.3:56892848-56892867 | None:intergenic | 20.0% |
| !! | TGCAAATTATTAATTGGATT+AGG | - | chr8.3:56892035-56892054 | MS.gene88405:intron | 20.0% |
| !! | TTACTATTGTAATTCTTAGA+AGG | - | chr8.3:56892552-56892571 | MS.gene88405:CDS | 20.0% |
| !! | TTGATTGATCAATAAATTAC+AGG | - | chr8.3:56890982-56891001 | MS.gene88405:intron | 20.0% |
| !!! | AAACATGTAGTTTTTAGATT+TGG | + | chr8.3:56890811-56890830 | None:intergenic | 20.0% |
| !!! | AATTTTTGTCATCATTCAAA+TGG | - | chr8.3:56892857-56892876 | MS.gene88405:CDS | 20.0% |
| !!! | CCAAAATTCAGATTATTTTA+AGG | - | chr8.3:56891128-56891147 | MS.gene88405:intron | 20.0% |
| !!! | CCTTAAAATAATCTGAATTT+TGG | + | chr8.3:56891131-56891150 | None:intergenic | 20.0% |
| !!! | CTAACTAAAGAATTTGATTT+TGG | - | chr8.3:56892894-56892913 | MS.gene88405:intron | 20.0% |
| !!! | GTTTTTAAATATGAAAAGGA+TGG | - | chr8.3:56891639-56891658 | MS.gene88405:intron | 20.0% |
| !!! | TTTTAGGTAAGTTAAAATCA+TGG | + | chr8.3:56892233-56892252 | None:intergenic | 20.0% |
| ! | AAAATTCGGAATGTTATCTT+AGG | + | chr8.3:56890678-56890697 | None:intergenic | 25.0% |
| ! | ATTATATAAAGGTCCTATTG+TGG | - | chr8.3:56891744-56891763 | MS.gene88405:CDS | 25.0% |
| ! | ATTATGTAGAAAATGGAAGA+AGG | - | chr8.3:56891173-56891192 | MS.gene88405:intron | 25.0% |
| ! | GATCAAAATTTCTATTATGC+TGG | - | chr8.3:56891014-56891033 | MS.gene88405:intron | 25.0% |
| ! | GCTATGATATGTTTACAATT+TGG | - | chr8.3:56890435-56890454 | MS.gene88405:CDS | 25.0% |
| ! | GTGACTGAAAAGTTAATATA+TGG | - | chr8.3:56890880-56890899 | MS.gene88405:CDS | 25.0% |
| ! | TCTTATGGTTTCATATTTGT+AGG | - | chr8.3:56890643-56890662 | MS.gene88405:intron | 25.0% |
| ! | TGACTACTAAAAAGAACTTA+TGG | + | chr8.3:56891573-56891592 | None:intergenic | 25.0% |
| !! | ATTATTCATGCGATATTTTG+TGG | + | chr8.3:56890907-56890926 | None:intergenic | 25.0% |
| !!! | AAAGGAATTTGATTTTTCCA+TGG | + | chr8.3:56890394-56890413 | None:intergenic | 25.0% |
| !!! | AATTTGATTTTGGACTATGT+GGG | - | chr8.3:56892904-56892923 | MS.gene88405:intron | 25.0% |
| !!! | ATTCTTACTCTCTGTTATTT+TGG | - | chr8.3:56892483-56892502 | MS.gene88405:CDS | 25.0% |
| !!! | ATTTTGAGGATGTCTATTTT+TGG | + | chr8.3:56891782-56891801 | None:intergenic | 25.0% |
| !!! | TAGAAATTTTGATCAATCAC+TGG | + | chr8.3:56891008-56891027 | None:intergenic | 25.0% |
| !!! | TGGTTAACATTTTTAGTAGT+AGG | + | chr8.3:56893164-56893183 | None:intergenic | 25.0% |
| !!! | TTGTGCAGTTTTATAATTTG+TGG | - | chr8.3:56890858-56890877 | MS.gene88405:CDS | 25.0% |
| AGATAAACATAAAGCAAGTG+AGG | - | chr8.3:56891665-56891684 | MS.gene88405:intron | 30.0% | |
| ATGATCATTGTTGCAATCAT+GGG | - | chr8.3:56892703-56892722 | MS.gene88405:intron | 30.0% | |
| ATGTCAATACCTATATTCGA+GGG | - | chr8.3:56892511-56892530 | MS.gene88405:CDS | 30.0% | |
| CAACAATGATCATCATAAGT+GGG | + | chr8.3:56892696-56892715 | None:intergenic | 30.0% | |
| CATTTGCATTTATGTTTGAG+AGG | - | chr8.3:56890562-56890581 | MS.gene88405:CDS | 30.0% | |
| CGGATTAAGAATGAATTTCA+CGG | + | chr8.3:56891459-56891478 | None:intergenic | 30.0% | |
| CTCTCAAACATAAATGCAAA+TGG | + | chr8.3:56890564-56890583 | None:intergenic | 30.0% | |
| GATATTCCTTTGCCAATAAA+GGG | - | chr8.3:56893017-56893036 | MS.gene88405:CDS | 30.0% | |
| TAAGCCTATAACAATCAAGA+TGG | + | chr8.3:56892946-56892965 | None:intergenic | 30.0% | |
| TGATATTCCTTTGCCAATAA+AGG | - | chr8.3:56893016-56893035 | MS.gene88405:CDS | 30.0% | |
| TGGTATGAACATTATCACTA+AGG | - | chr8.3:56890464-56890483 | MS.gene88405:CDS | 30.0% | |
| TGGTTTCATATTTGTAGGAA+AGG | - | chr8.3:56890648-56890667 | MS.gene88405:intron | 30.0% | |
| ! | CTGAAAGAGATTGGATTTTA+GGG | - | chr8.3:56891833-56891852 | MS.gene88405:CDS | 30.0% |
| ! | GTTTCATGTGTTTCATTTTG+AGG | + | chr8.3:56891796-56891815 | None:intergenic | 30.0% |
| ! | TCTGAAAGAGATTGGATTTT+AGG | - | chr8.3:56891832-56891851 | MS.gene88405:CDS | 30.0% |
| !! | ATTTTAAGGGTGTGAATGTT+TGG | - | chr8.3:56891142-56891161 | MS.gene88405:intron | 30.0% |
| !! | GAATTTGATTTTGGACTATG+TGG | - | chr8.3:56892903-56892922 | MS.gene88405:intron | 30.0% |
| !! | TTCTAGCGATGAAGTTTTAA+AGG | + | chr8.3:56891348-56891367 | None:intergenic | 30.0% |
| AATCTGTTCTGCAAGGATAA+AGG | + | chr8.3:56892731-56892750 | None:intergenic | 35.0% | |
| ACTAAGTCTTACTTCACTTG+TGG | - | chr8.3:56892089-56892108 | MS.gene88405:intron | 35.0% | |
| AGGCTTATATTCTGTTCTGT+GGG | - | chr8.3:56892959-56892978 | MS.gene88405:intron | 35.0% | |
| CATGTCAATACCTATATTCG+AGG | - | chr8.3:56892510-56892529 | MS.gene88405:CDS | 35.0% | |
| GACACAGATCAAGTAAAACA+TGG | - | chr8.3:56893077-56893096 | MS.gene88405:CDS | 35.0% | |
| GATGATCATTGTTGCAATCA+TGG | - | chr8.3:56892702-56892721 | MS.gene88405:intron | 35.0% | |
| GCAACAATGATCATCATAAG+TGG | + | chr8.3:56892697-56892716 | None:intergenic | 35.0% | |
| GTAATGCTTCATGTTCTCAA+AGG | + | chr8.3:56890412-56890431 | None:intergenic | 35.0% | |
| TAGGCTTATATTCTGTTCTG+TGG | - | chr8.3:56892958-56892977 | MS.gene88405:intron | 35.0% | |
| TGTTTACAATTTGGCTATGC+TGG | - | chr8.3:56890444-56890463 | MS.gene88405:CDS | 35.0% | |
| TTCGGAATGTTATCTTAGGT+TGG | + | chr8.3:56890674-56890693 | None:intergenic | 35.0% | |
| TTGTTCCCAATATCTTTGCT+TGG | + | chr8.3:56891693-56891712 | None:intergenic | 35.0% | |
| ! | AACTGAAGAAAGCATGTTGT+TGG | + | chr8.3:56893117-56893136 | None:intergenic | 35.0% |
| ! | CTTCTTGCTAGCTTAATTCA+CGG | - | chr8.3:56890736-56890755 | MS.gene88405:intron | 35.0% |
| !! | ATTGGGAACAATTTTGACAG+TGG | - | chr8.3:56891702-56891721 | MS.gene88405:CDS | 35.0% |
| !! | ATTTTCATCCTAGCTCTTCT+TGG | - | chr8.3:56890705-56890724 | MS.gene88405:intron | 35.0% |
| !! | CTTTTAAGTCCCTCGAATAT+AGG | + | chr8.3:56892523-56892542 | None:intergenic | 35.0% |
| !! | TTTTCATCCTAGCTCTTCTT+GGG | - | chr8.3:56890706-56890725 | MS.gene88405:intron | 35.0% |
| !!! | AGCTATTGCTGTTACTTTTG+TGG | - | chr8.3:56892131-56892150 | MS.gene88405:intron | 35.0% |
| AACTGCCATCACAAAAGTCA+TGG | + | chr8.3:56891093-56891112 | None:intergenic | 40.0% | |
| ACACATGAAACAACAACCAC+AGG | - | chr8.3:56891805-56891824 | MS.gene88405:CDS | 40.0% | |
| ACTAAGGTTTCTCTCAACCA+AGG | - | chr8.3:56890480-56890499 | MS.gene88405:CDS | 40.0% | |
| ACTTCACTTGTGGTCTTCAT+TGG | - | chr8.3:56892099-56892118 | MS.gene88405:intron | 40.0% | |
| AGCTTGGCATACTATGTACA+AGG | - | chr8.3:56892625-56892644 | MS.gene88405:intron | 40.0% | |
| AGGTGCCAAGCAAAGATATT+GGG | - | chr8.3:56891685-56891704 | MS.gene88405:CDS | 40.0% | |
| ATCTCTTTCAGAAGATCCTG+TGG | + | chr8.3:56891824-56891843 | None:intergenic | 40.0% | |
| ATGGAAGATCCTTACAGCAT+AGG | + | chr8.3:56892214-56892233 | None:intergenic | 40.0% | |
| CAGAACAGATTTACTCTGGA+GGG | - | chr8.3:56892740-56892759 | MS.gene88405:intron | 40.0% | |
| CAGAGTAAATCTGTTCTGCA+AGG | + | chr8.3:56892738-56892757 | None:intergenic | 40.0% | |
| CTCATTTGAGCACCCTTTAT+TGG | + | chr8.3:56893032-56893051 | None:intergenic | 40.0% | |
| CTCGTCGCTAAATTTAGTGA+CGG | + | chr8.3:56891479-56891498 | None:intergenic | 40.0% | |
| CTTGCAGAACAGATTTACTC+TGG | - | chr8.3:56892736-56892755 | MS.gene88405:intron | 40.0% | |
| GCTCAAATGAGTGGAAATTC+AGG | - | chr8.3:56893041-56893060 | MS.gene88405:CDS | 40.0% | |
| GCTTGGCATACTATGTACAA+GGG | - | chr8.3:56892626-56892645 | MS.gene88405:intron | 40.0% | |
| GGCTTATATTCTGTTCTGTG+GGG | - | chr8.3:56892960-56892979 | MS.gene88405:intron | 40.0% | |
| TAAAGGTCCTATTGTGGAGA+TGG | - | chr8.3:56891750-56891769 | MS.gene88405:CDS | 40.0% | |
| TACATAGTATGCCAAGCTTG+AGG | + | chr8.3:56892623-56892642 | None:intergenic | 40.0% | |
| TATCATTGCCACCTTTGCTT+GGG | - | chr8.3:56891867-56891886 | MS.gene88405:CDS | 40.0% | |
| TCCTATTGTGGAGATGGTAT+GGG | - | chr8.3:56891756-56891775 | MS.gene88405:CDS | 40.0% | |
| TTAGTAGTAGGCTCTCTAGT+AGG | + | chr8.3:56893152-56893171 | None:intergenic | 40.0% | |
| TTATCATTGCCACCTTTGCT+TGG | - | chr8.3:56891866-56891885 | MS.gene88405:CDS | 40.0% | |
| ! | ATGTACAAGGGCTAGTGATT+AGG | - | chr8.3:56892638-56892657 | MS.gene88405:intron | 40.0% |
| ! | CAGGATCTTCTGAAAGAGAT+TGG | - | chr8.3:56891824-56891843 | MS.gene88405:CDS | 40.0% |
| ! | GGTGCCATCTTGATTGTTAT+AGG | - | chr8.3:56892939-56892958 | MS.gene88405:intron | 40.0% |
| ! | TTGCTAGCTTAATTCACGGT+TGG | - | chr8.3:56890740-56890759 | MS.gene88405:intron | 40.0% |
| !! | ATAAAGGGTGCTCAAATGAG+TGG | - | chr8.3:56893032-56893051 | MS.gene88405:CDS | 40.0% |
| !! | GATCATCATAAGTGGGCTAA+AGG | + | chr8.3:56892689-56892708 | None:intergenic | 40.0% |
| !! | TTCTGTATGGAGGATTGGTT+GGG | - | chr8.3:56892167-56892186 | MS.gene88405:intron | 40.0% |
| !! | TTGTGATGGCAGTTTTATGC+AGG | - | chr8.3:56891099-56891118 | MS.gene88405:intron | 40.0% |
| AAAGAGTGAAGCCCAAGCAA+AGG | + | chr8.3:56891881-56891900 | None:intergenic | 45.0% | |
| AGACTAACCCAAGAAGAGCT+AGG | + | chr8.3:56890716-56890735 | None:intergenic | 45.0% | |
| AGCATGATCCTTCTGTATGG+AGG | - | chr8.3:56892157-56892176 | MS.gene88405:intron | 45.0% | |
| CAACCAATCCTCCATACAGA+AGG | + | chr8.3:56892168-56892187 | None:intergenic | 45.0% | |
| CTAAAGGCAGTTGCAAAGAC+AGG | + | chr8.3:56892673-56892692 | None:intergenic | 45.0% | |
| CTCATTGCACAAGAGAAGGT+TGG | + | chr8.3:56891056-56891075 | None:intergenic | 45.0% | |
| CTGAGCATGATCCTTCTGTA+TGG | - | chr8.3:56892154-56892173 | MS.gene88405:intron | 45.0% | |
| GATAAACGACGAGGACATAG+TGG | + | chr8.3:56890512-56890531 | None:intergenic | 45.0% | |
| GATCCTTCTGTATGGAGGAT+TGG | - | chr8.3:56892162-56892181 | MS.gene88405:intron | 45.0% | |
| GCAGAACAGATTTACTCTGG+AGG | - | chr8.3:56892739-56892758 | MS.gene88405:intron | 45.0% | |
| GTCCTATTGTGGAGATGGTA+TGG | - | chr8.3:56891755-56891774 | MS.gene88405:CDS | 45.0% | |
| GTTGCTCATTGCACAAGAGA+AGG | + | chr8.3:56891060-56891079 | None:intergenic | 45.0% | |
| TAGAAGCAGTTGCAAAAGCG+TGG | + | chr8.3:56890536-56890555 | None:intergenic | 45.0% | |
| TGAGCACCCTTTATTGGCAA+AGG | + | chr8.3:56893026-56893045 | None:intergenic | 45.0% | |
| TTGCTTCTGCCTATGCTGTA+AGG | - | chr8.3:56892202-56892221 | MS.gene88405:intron | 45.0% | |
| ! | CTTCTGTATGGAGGATTGGT+TGG | - | chr8.3:56892166-56892185 | MS.gene88405:intron | 45.0% |
| ! | GAGGTGCCAAGCAAAGATAT+TGG | - | chr8.3:56891684-56891703 | MS.gene88405:CDS | 45.0% |
| ! | GGGCTAGTGATTAGGAAGAA+AGG | - | chr8.3:56892646-56892665 | MS.gene88405:intron | 45.0% |
| ! | TCCAGCCATGACTTTTGTGA+TGG | - | chr8.3:56891085-56891104 | MS.gene88405:intron | 45.0% |
| !! | GGAACAATTTTGACAGTGGC+TGG | - | chr8.3:56891706-56891725 | MS.gene88405:CDS | 45.0% |
| !!! | AATTTATTTTATTTTTGTTA+GGG | - | chr8.3:56892589-56892608 | MS.gene88405:intron | 5.0% |
| !!! | ATCATTAATTAATTATTTTT+TGG | - | chr8.3:56891532-56891551 | MS.gene88405:intron | 5.0% |
| !!! | TAATTTATTTTATTTTTGTT+AGG | - | chr8.3:56892588-56892607 | MS.gene88405:intron | 5.0% |
| ACTATGTGGGTGCAGTGTGA+TGG | - | chr8.3:56892917-56892936 | MS.gene88405:intron | 50.0% | |
| CTATGTGGGTGCAGTGTGAT+GGG | - | chr8.3:56892918-56892937 | MS.gene88405:intron | 50.0% | |
| GCCATCACAAAAGTCATGGC+TGG | + | chr8.3:56891089-56891108 | None:intergenic | 50.0% | |
| GCCCATACCATCTCCACAAT+AGG | + | chr8.3:56891760-56891779 | None:intergenic | 50.0% | |
| GGACATAGTGGCTCATTCCT+TGG | + | chr8.3:56890500-56890519 | None:intergenic | 50.0% | |
| GGGAATTGTGACCTCAAGCT+TGG | - | chr8.3:56892609-56892628 | MS.gene88405:intron | 50.0% | |
| AAGCGTGGCGATAAACGACG+AGG | + | chr8.3:56890521-56890540 | None:intergenic | 55.0% | |
| GAGTGAAGCCCAAGCAAAGG+TGG | + | chr8.3:56891878-56891897 | None:intergenic | 55.0% | |
| TGTTCTGTGGGGCAAGCACA+AGG | - | chr8.3:56892971-56892990 | MS.gene88405:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 56890387 | 56893190 | 56890387 | ID=MS.gene88405 |
| chr8.3 | mRNA | 56890387 | 56893190 | 56890387 | ID=MS.gene88405.t1;Parent=MS.gene88405 |
| chr8.3 | exon | 56892994 | 56893190 | 56892994 | ID=MS.gene88405.t1.exon1;Parent=MS.gene88405.t1 |
| chr8.3 | CDS | 56892994 | 56893190 | 56892994 | ID=cds.MS.gene88405.t1;Parent=MS.gene88405.t1 |
| chr8.3 | exon | 56892850 | 56892912 | 56892850 | ID=MS.gene88405.t1.exon2;Parent=MS.gene88405.t1 |
| chr8.3 | CDS | 56892850 | 56892912 | 56892850 | ID=cds.MS.gene88405.t1;Parent=MS.gene88405.t1 |
| chr8.3 | exon | 56892457 | 56892573 | 56892457 | ID=MS.gene88405.t1.exon3;Parent=MS.gene88405.t1 |
| chr8.3 | CDS | 56892457 | 56892573 | 56892457 | ID=cds.MS.gene88405.t1;Parent=MS.gene88405.t1 |
| chr8.3 | exon | 56891668 | 56891920 | 56891668 | ID=MS.gene88405.t1.exon4;Parent=MS.gene88405.t1 |
| chr8.3 | CDS | 56891668 | 56891920 | 56891668 | ID=cds.MS.gene88405.t1;Parent=MS.gene88405.t1 |
| chr8.3 | exon | 56891359 | 56891520 | 56891359 | ID=MS.gene88405.t1.exon5;Parent=MS.gene88405.t1 |
| chr8.3 | CDS | 56891359 | 56891520 | 56891359 | ID=cds.MS.gene88405.t1;Parent=MS.gene88405.t1 |
| chr8.3 | exon | 56890816 | 56890967 | 56890816 | ID=MS.gene88405.t1.exon6;Parent=MS.gene88405.t1 |
| chr8.3 | CDS | 56890816 | 56890967 | 56890816 | ID=cds.MS.gene88405.t1;Parent=MS.gene88405.t1 |
| chr8.3 | exon | 56890387 | 56890645 | 56890387 | ID=MS.gene88405.t1.exon7;Parent=MS.gene88405.t1 |
| chr8.3 | CDS | 56890387 | 56890645 | 56890387 | ID=cds.MS.gene88405.t1;Parent=MS.gene88405.t1 |
| Gene Sequence |
| Protein sequence |
