Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88645.t1 | XP_013458523.1 | 99.2 | 375 | 3 | 0 | 1 | 375 | 1 | 375 | 3.50E-196 | 694.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88645.t1 | Q9Y2D8 | 26.8 | 321 | 220 | 5 | 8 | 318 | 43 | 358 | 1.4e-23 | 112.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88645.t1 | A0A072URX3 | 99.2 | 375 | 3 | 0 | 1 | 375 | 1 | 375 | 2.5e-196 | 694.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049178 | MS.gene88645 | 0.808311 | 3.30E-50 | -1.69E-46 |
| MS.gene049887 | MS.gene88645 | 0.819387 | 1.19E-52 | -1.69E-46 |
| MS.gene050807 | MS.gene88645 | 0.802863 | 4.58E-49 | -1.69E-46 |
| MS.gene050838 | MS.gene88645 | 0.824114 | 9.62E-54 | -1.69E-46 |
| MS.gene051063 | MS.gene88645 | 0.823761 | 1.16E-53 | -1.69E-46 |
| MS.gene051687 | MS.gene88645 | 0.80486 | 1.76E-49 | -1.69E-46 |
| MS.gene051700 | MS.gene88645 | 0.802251 | 6.13E-49 | -1.69E-46 |
| MS.gene051746 | MS.gene88645 | 0.81064 | 1.04E-50 | -1.69E-46 |
| MS.gene051748 | MS.gene88645 | 0.818616 | 1.79E-52 | -1.69E-46 |
| MS.gene051903 | MS.gene88645 | 0.809472 | 1.86E-50 | -1.69E-46 |
| MS.gene052133 | MS.gene88645 | 0.837467 | 5.11E-57 | -1.69E-46 |
| MS.gene052947 | MS.gene88645 | 0.818058 | 2.39E-52 | -1.69E-46 |
| MS.gene053109 | MS.gene88645 | 0.822558 | 2.22E-53 | -1.69E-46 |
| MS.gene053437 | MS.gene88645 | 0.806033 | 1.00E-49 | -1.69E-46 |
| MS.gene053581 | MS.gene88645 | 0.821999 | 3.00E-53 | -1.69E-46 |
| MS.gene055311 | MS.gene88645 | 0.803966 | 2.71E-49 | -1.69E-46 |
| MS.gene055314 | MS.gene88645 | 0.810039 | 1.41E-50 | -1.69E-46 |
| MS.gene055591 | MS.gene88645 | -0.811401 | 7.13E-51 | -1.69E-46 |
| MS.gene057057 | MS.gene88645 | 0.800462 | 1.42E-48 | -1.69E-46 |
| MS.gene057094 | MS.gene88645 | 0.809204 | 2.12E-50 | -1.69E-46 |
| MS.gene058639 | MS.gene88645 | 0.805774 | 1.13E-49 | -1.69E-46 |
| MS.gene058852 | MS.gene88645 | 0.866825 | 2.15E-65 | -1.69E-46 |
| MS.gene058906 | MS.gene88645 | 0.807194 | 5.69E-50 | -1.69E-46 |
| MS.gene059171 | MS.gene88645 | 0.861497 | 9.84E-64 | -1.69E-46 |
| MS.gene06001 | MS.gene88645 | 0.847337 | 1.23E-59 | -1.69E-46 |
| MS.gene060869 | MS.gene88645 | 0.812534 | 4.04E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88645.t1 | MTR_4g127970 | 99.200 | 375 | 3 | 0 | 1 | 375 | 1 | 375 | 0.0 | 771 |
| MS.gene88645.t1 | MTR_4g127970 | 99.194 | 372 | 3 | 0 | 1 | 372 | 1 | 372 | 0.0 | 763 |
| MS.gene88645.t1 | MTR_4g127970 | 99.176 | 364 | 3 | 0 | 1 | 364 | 1 | 364 | 0.0 | 748 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88645.t1 | AT5G57410 | 79.255 | 376 | 72 | 3 | 1 | 373 | 1 | 373 | 0.0 | 597 |
| MS.gene88645.t1 | AT5G57410 | 78.836 | 378 | 74 | 3 | 1 | 375 | 1 | 375 | 0.0 | 597 |
| MS.gene88645.t1 | AT2G18876 | 76.676 | 373 | 86 | 1 | 4 | 375 | 6 | 378 | 0.0 | 576 |
| MS.gene88645.t1 | AT5G57410 | 82.388 | 335 | 54 | 2 | 42 | 373 | 1 | 333 | 0.0 | 551 |
| MS.gene88645.t1 | AT2G18876 | 77.857 | 280 | 62 | 0 | 96 | 375 | 1 | 280 | 9.43e-156 | 439 |
Find 71 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGCAGAAAATGCTGATTTA+AGG | 0.209461 | 8.4:+6542751 | MS.gene88645:CDS |
| CTGAAGGAGACTTAGATCTT+AGG | 0.266475 | 8.4:+6541061 | MS.gene88645:CDS |
| ATTCGCCGATGTAAACAATT+TGG | 0.268664 | 8.4:+6541287 | MS.gene88645:CDS |
| CTTTCTGAGCATCTTGCAAT+TGG | 0.281888 | 8.4:-6543946 | None:intergenic |
| GAATTTCAGAGGATGGTTAT+TGG | 0.312259 | 8.4:+6542042 | MS.gene88645:CDS |
| GGAGATAATGAATTTGCTTC+AGG | 0.322573 | 8.4:+6542450 | MS.gene88645:CDS |
| GAGGATGGTTATTGGTAATC+AGG | 0.324855 | 8.4:+6542050 | MS.gene88645:CDS |
| CTAAGATCTAAGTCTCCTTC+AGG | 0.332420 | 8.4:-6541060 | None:intergenic |
| TCTCATTCTGCTTTCACAAC+CGG | 0.335124 | 8.4:+6541167 | MS.gene88645:CDS |
| AGCAAAGATGGCTTCTATAA+AGG | 0.358500 | 8.4:+6543811 | MS.gene88645:CDS |
| GATCGGTGCTAAAGCAAGTT+AGG | 0.379032 | 8.4:+6542170 | MS.gene88645:intron |
| AACCAATCACTCGTTACATT+TGG | 0.384759 | 8.4:+6541330 | MS.gene88645:CDS |
| TTTCATTAGTAGTGGGAGAT+TGG | 0.404934 | 8.4:-6543609 | None:intergenic |
| AAAGGAATACATTAAGTTGC+AGG | 0.407699 | 8.4:+6542225 | MS.gene88645:CDS |
| CTCATTCTGCTTTCACAACC+GGG | 0.410022 | 8.4:+6541168 | MS.gene88645:CDS |
| GCTAAAGTTGAGAGGCTTGA+TGG | 0.424851 | 8.4:+6541701 | MS.gene88645:CDS |
| AGCAGAAAATGCTGATTTAA+GGG | 0.431389 | 8.4:+6542752 | MS.gene88645:CDS |
| GAGGGATGAATTTCAGAGGA+TGG | 0.437656 | 8.4:+6542035 | MS.gene88645:CDS |
| GAGACTAAACCAAGTGTTGA+TGG | 0.441272 | 8.4:+6542399 | MS.gene88645:CDS |
| TTGATGTTATAGATTGTTGT+CGG | 0.446064 | 8.4:+6541661 | MS.gene88645:intron |
| TGAAGGAGACTTAGATCTTA+GGG | 0.451843 | 8.4:+6541062 | MS.gene88645:CDS |
| GATTGGTTTGGTAGTCCGTT+AGG | 0.455596 | 8.4:-6543592 | None:intergenic |
| GAGAATAGATCAAGTGAAGC+AGG | 0.463962 | 8.4:-6541357 | None:intergenic |
| ATGAAAGGTGGACGCTTATG+AGG | 0.465264 | 8.4:+6542710 | MS.gene88645:intron |
| TCTTCTTCTCCATCAACACT+TGG | 0.465829 | 8.4:-6542408 | None:intergenic |
| AAGGAGCATTATACAAGAGC+AGG | 0.468589 | 8.4:+6544033 | MS.gene88645:CDS |
| AACCAAATGTAACGAGTGAT+TGG | 0.476259 | 8.4:-6541332 | None:intergenic |
| AGGCAACGTGGAACATGGAA+TGG | 0.477813 | 8.4:+6542573 | MS.gene88645:CDS |
| AACATCTTGCAAAGTCTGAC+AGG | 0.478571 | 8.4:+6544501 | MS.gene88645:CDS |
| TGAGATGAAGAAGAAGGAAA+AGG | 0.485631 | 8.4:+6542207 | MS.gene88645:CDS |
| CAGGGAATCGGCACCGGCTG+AGG | 0.485878 | 8.4:+6544608 | MS.gene88645:intron |
| TAAGATCTAAGTCTCCTTCA+GGG | 0.487351 | 8.4:-6541059 | None:intergenic |
| AGAGAGTCTAAGAGCAAAGA+TGG | 0.492833 | 8.4:+6543799 | MS.gene88645:CDS |
| TTAGTAGTGGGAGATTGGTT+TGG | 0.493506 | 8.4:-6543604 | None:intergenic |
| GTCGGATATATCAAGATATG+AGG | 0.501288 | 8.4:+6541679 | MS.gene88645:CDS |
| CCTTCACATTCTCCGATGGT+TGG | 0.509391 | 8.4:+6543646 | MS.gene88645:CDS |
| TGATCTCTAGCCATGTGAAA+AGG | 0.512834 | 8.4:-6543770 | None:intergenic |
| TTCTCCGATGGTTGGAAGAA+CGG | 0.529147 | 8.4:+6543654 | MS.gene88645:CDS |
| GGCAACGTGGAACATGGAAT+GGG | 0.529540 | 8.4:+6542574 | MS.gene88645:CDS |
| AATACATGAGATGAAGAAGA+AGG | 0.539316 | 8.4:+6542201 | MS.gene88645:CDS |
| TGGAGAAGAAGAAAGAATCT+AGG | 0.539755 | 8.4:+6542419 | MS.gene88645:CDS |
| GAAAGAATCTAGGTCGGGCA+TGG | 0.541566 | 8.4:+6542429 | MS.gene88645:CDS |
| ATTGCAAGATGCTCAGAAAG+AGG | 0.551306 | 8.4:+6543949 | MS.gene88645:CDS |
| GGCATTGTTGAGATCAATGC+AGG | 0.551330 | 8.4:+6542773 | MS.gene88645:CDS |
| AAGCTCAACTTGTTGAAGCA+AGG | 0.554611 | 8.4:+6544014 | MS.gene88645:CDS |
| ACAACAATGCCTTCCCCTGA+AGG | 0.557896 | 8.4:+6541045 | None:intergenic |
| CATAAAATACATACCTCAGC+CGG | 0.561677 | 8.4:-6544621 | None:intergenic |
| AAGAAGAAAGAATCTAGGTC+GGG | 0.563858 | 8.4:+6542424 | MS.gene88645:CDS |
| TTGCAAAGTCTGACAGGCCA+AGG | 0.565306 | 8.4:+6544507 | MS.gene88645:CDS |
| CATACCGTTCTTCCAACCAT+CGG | 0.570593 | 8.4:-6543658 | None:intergenic |
| TTGAAATATGAAGGAGCGCA+TGG | 0.571327 | 8.4:+6543922 | MS.gene88645:intron |
| AAGGGAGGCAACGTGGAACA+TGG | 0.578914 | 8.4:+6542568 | MS.gene88645:CDS |
| TCTAAGTCTCCTTCAGGGGA+AGG | 0.580264 | 8.4:-6541054 | None:intergenic |
| ATGTTCCAAATTGTTTACAT+CGG | 0.582928 | 8.4:-6541292 | None:intergenic |
| TAATCCTTCACATTCTCCGA+TGG | 0.586438 | 8.4:+6543642 | MS.gene88645:CDS |
| GTGAAAGCAGAATGAGAAGA+TGG | 0.586466 | 8.4:-6541161 | None:intergenic |
| GAAAGAGGCAGAAGTCACTT+CGG | 0.590207 | 8.4:+6543964 | MS.gene88645:CDS |
| TGTGGTAGGTTTCTATAGCA+AGG | 0.590695 | 8.4:+6541477 | MS.gene88645:intron |
| GATGTGCATAAACAGAAGGA+AGG | 0.605299 | 8.4:+6542549 | MS.gene88645:intron |
| AGAATAGATCAAGTGAAGCA+GGG | 0.616733 | 8.4:-6541356 | None:intergenic |
| GAAGAAGAAAGAATCTAGGT+CGG | 0.617695 | 8.4:+6542423 | MS.gene88645:CDS |
| GATTTCTTAAATGCTCCTAA+CGG | 0.620088 | 8.4:+6543577 | MS.gene88645:CDS |
| ATGTGCATAAACAGAAGGAA+GGG | 0.622972 | 8.4:+6542550 | MS.gene88645:intron |
| AAGAGAGGGATGAATTTCAG+AGG | 0.623845 | 8.4:+6542031 | MS.gene88645:CDS |
| GATATGAGGCTAAAGTTGAG+AGG | 0.640641 | 8.4:+6541693 | MS.gene88645:CDS |
| CCAACCATCGGAGAATGTGA+AGG | 0.644590 | 8.4:-6543646 | None:intergenic |
| AAGATCTAAGTCTCCTTCAG+GGG | 0.653936 | 8.4:-6541058 | None:intergenic |
| TGCATAAACAGAAGGAAGGG+AGG | 0.662009 | 8.4:+6542553 | MS.gene88645:intron |
| CAGAAGGAAGGGAGGCAACG+TGG | 0.662298 | 8.4:+6542561 | MS.gene88645:intron |
| GATAGCGACGATAACTAGAA+CGG | 0.680604 | 8.4:+6541748 | MS.gene88645:CDS |
| CTGCGAATGAACAAAGACAA+CGG | 0.734178 | 8.4:+6541561 | MS.gene88645:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAAAGTTTATAATGAT+AGG | - | chr8.4:6542649-6542668 | None:intergenic | 10.0% |
| !! | ATATAAAGTTTATAATGATA+GGG | - | chr8.4:6542648-6542667 | None:intergenic | 10.0% |
| !!! | ATTTTATTTTGTAATGATTA+GGG | + | chr8.4:6544776-6544795 | MS.gene88645:intron | 10.0% |
| !!! | TATTTTATTTTGTAATGATT+AGG | + | chr8.4:6544775-6544794 | MS.gene88645:intron | 10.0% |
| !! | AGAAATTAAAGAAGAAAAAA+AGG | - | chr8.4:6541112-6541131 | None:intergenic | 15.0% |
| !! | ATAAATTCTTTAATGCATTT+GGG | + | chr8.4:6543257-6543276 | MS.gene88645:intron | 15.0% |
| !! | GAAATTAAAGAAGAAAAAAA+GGG | - | chr8.4:6541111-6541130 | None:intergenic | 15.0% |
| !! | TATAAATTCTTTAATGCATT+TGG | + | chr8.4:6543256-6543275 | MS.gene88645:intron | 15.0% |
| !! | TCATTATAAACTTTATATTC+TGG | + | chr8.4:6542650-6542669 | MS.gene88645:intron | 15.0% |
| !! | TTTATTATAATAATGAAAGG+TGG | + | chr8.4:6542698-6542717 | MS.gene88645:intron | 15.0% |
| !!! | ATGATTTTAAATTATGGTTT+TGG | + | chr8.4:6541778-6541797 | MS.gene88645:intron | 15.0% |
| !!! | ATTTACTTTTTGAATTTTAC+AGG | + | chr8.4:6544589-6544608 | MS.gene88645:intron | 15.0% |
| !!! | CTAACATTATTTTGTAAATA+AGG | - | chr8.4:6541860-6541879 | None:intergenic | 15.0% |
| !!! | TCATAAATTTTTTATGCTTT+GGG | + | chr8.4:6543061-6543080 | MS.gene88645:intron | 15.0% |
| !!! | TTCATAAATTTTTTATGCTT+TGG | + | chr8.4:6543060-6543079 | MS.gene88645:intron | 15.0% |
| !!! | TTTACTTTTTGAATTTTACA+GGG | + | chr8.4:6544590-6544609 | MS.gene88645:intron | 15.0% |
| !!! | TTTGTTCTTGTTTTTAAAAA+TGG | + | chr8.4:6541439-6541458 | MS.gene88645:intron | 15.0% |
| !! | ATATATGAATTGTTTGTGTT+TGG | + | chr8.4:6543881-6543900 | MS.gene88645:intron | 20.0% |
| !! | ATCAAAGATCAAAATTCTTA+CGG | - | chr8.4:6541391-6541410 | None:intergenic | 20.0% |
| !! | ATTAGACTTAGAAATATGAA+AGG | + | chr8.4:6542354-6542373 | MS.gene88645:intron | 20.0% |
| !! | ATTTATGAATGAAATGAGAA+CGG | - | chr8.4:6543049-6543068 | None:intergenic | 20.0% |
| !! | CAAAATAAAAATTACAACGA+TGG | - | chr8.4:6543430-6543449 | None:intergenic | 20.0% |
| !! | CAAATTCACACTATAAAATT+AGG | - | chr8.4:6544706-6544725 | None:intergenic | 20.0% |
| !! | GAAAATAAGATACATGTTTA+GGG | - | chr8.4:6544313-6544332 | None:intergenic | 20.0% |
| !! | TAAATTCTTTAATGCATTTG+GGG | + | chr8.4:6543258-6543277 | MS.gene88645:intron | 20.0% |
| !! | TAACAAACTCATAAATTTCA+TGG | - | chr8.4:6543728-6543747 | None:intergenic | 20.0% |
| !! | TATCAATCTTACTATTTGAT+CGG | + | chr8.4:6542153-6542172 | MS.gene88645:intron | 20.0% |
| !! | TGAAAATAAGATACATGTTT+AGG | - | chr8.4:6544314-6544333 | None:intergenic | 20.0% |
| !!! | AAACTAAATTGCTATTGAAT+TGG | + | chr8.4:6544225-6544244 | MS.gene88645:intron | 20.0% |
| !!! | ATTTTATAGTGTGAATTTGT+TGG | + | chr8.4:6544707-6544726 | MS.gene88645:intron | 20.0% |
| !!! | CAATTTTACCATATTATTAC+AGG | - | chr8.4:6545554-6545573 | None:intergenic | 20.0% |
| !!! | CATAAATTTTTTATGCTTTG+GGG | + | chr8.4:6543062-6543081 | MS.gene88645:intron | 20.0% |
| !!! | CTTTAAAGAACATTAGAAAT+GGG | + | chr8.4:6545271-6545290 | MS.gene88645:intron | 20.0% |
| !!! | TTGTAATTTTTATTTTGCGT+AGG | + | chr8.4:6543433-6543452 | MS.gene88645:intron | 20.0% |
| !!! | TTGTGAATTTTGTGATAATT+TGG | + | chr8.4:6542519-6542538 | MS.gene88645:intron | 20.0% |
| ! | AAAGAAAAAATGAGACAGTT+AGG | - | chr8.4:6541138-6541157 | None:intergenic | 25.0% |
| ! | AACATGAACTCTAATAAATC+TGG | + | chr8.4:6543365-6543384 | MS.gene88645:intron | 25.0% |
| ! | AAGAAAAAATGAGACAGTTA+GGG | - | chr8.4:6541137-6541156 | None:intergenic | 25.0% |
| ! | AAGGAAAATCAATGAAACAT+GGG | - | chr8.4:6542876-6542895 | None:intergenic | 25.0% |
| ! | AATAATAACTAAATGGAACC+GGG | + | chr8.4:6543331-6543350 | MS.gene88645:intron | 25.0% |
| ! | ACTAATAGGAAAATTTATCC+AGG | - | chr8.4:6544978-6544997 | None:intergenic | 25.0% |
| ! | ACTTACAAATCTCATAATCT+AGG | - | chr8.4:6543532-6543551 | None:intergenic | 25.0% |
| ! | ATCTACTTCTAAATGTAAAG+TGG | - | chr8.4:6545583-6545602 | None:intergenic | 25.0% |
| ! | ATGTTCCAAATTGTTTACAT+CGG | - | chr8.4:6541295-6541314 | None:intergenic | 25.0% |
| ! | CAATAATAACTAAATGGAAC+CGG | + | chr8.4:6543330-6543349 | MS.gene88645:intron | 25.0% |
| ! | GTGATAATATGTTATATTGC+AGG | + | chr8.4:6544463-6544482 | MS.gene88645:intron | 25.0% |
| ! | TACAACTTAATTAGCATGAT+AGG | + | chr8.4:6545081-6545100 | MS.gene88645:intron | 25.0% |
| ! | TATATGCAAGTACTTAATGA+TGG | - | chr8.4:6543866-6543885 | None:intergenic | 25.0% |
| ! | TCAAAGATCAAAATTCTTAC+GGG | - | chr8.4:6541390-6541409 | None:intergenic | 25.0% |
| ! | TCACAAAACGTTAAAAAGTT+AGG | - | chr8.4:6545119-6545138 | None:intergenic | 25.0% |
| ! | TGGGTATTATTATAGAACAA+CGG | - | chr8.4:6543484-6543503 | None:intergenic | 25.0% |
| ! | TTGATGTTATAGATTGTTGT+CGG | + | chr8.4:6541661-6541680 | MS.gene88645:intron | 25.0% |
| ! | TTTCTAAGTCTAATAACTTG+CGG | - | chr8.4:6542348-6542367 | None:intergenic | 25.0% |
| !! | ATGATCATATTGGTAGTAAT+TGG | + | chr8.4:6545525-6545544 | MS.gene88645:intron | 25.0% |
| !! | ATTGTTCTTTTCTGATTTAC+AGG | + | chr8.4:6545651-6545670 | MS.gene88645:intron | 25.0% |
| !! | ATTTGGGGAACTAATTATTT+TGG | + | chr8.4:6543273-6543292 | MS.gene88645:intron | 25.0% |
| !! | ATTTTGCATCATAGTAAAAC+AGG | - | chr8.4:6544112-6544131 | None:intergenic | 25.0% |
| !! | CATAAAGAACTAATTTGCAT+TGG | - | chr8.4:6544195-6544214 | None:intergenic | 25.0% |
| !! | GAGGCAATGATTTTAAATTA+TGG | + | chr8.4:6541772-6541791 | MS.gene88645:intron | 25.0% |
| !! | GTTTAATGTGAATGGTATTT+TGG | + | chr8.4:6542270-6542289 | MS.gene88645:intron | 25.0% |
| !! | TCAGATTTTTCATTAGTAGT+GGG | - | chr8.4:6543619-6543638 | None:intergenic | 25.0% |
| !! | TTCAGATTTTTCATTAGTAG+TGG | - | chr8.4:6543620-6543639 | None:intergenic | 25.0% |
| !! | TTGTTCTTTTCTGATTTACA+GGG | + | chr8.4:6545652-6545671 | MS.gene88645:intron | 25.0% |
| !! | TTTTGAATTTTACAGGGAAT+CGG | + | chr8.4:6544596-6544615 | MS.gene88645:intron | 25.0% |
| !!! | ATTGAATTGGTGTTTCTTTT+AGG | + | chr8.4:6544238-6544257 | MS.gene88645:intron | 25.0% |
| !!! | CTTTTGTTGTTTAATGTGAA+TGG | + | chr8.4:6542262-6542281 | MS.gene88645:intron | 25.0% |
| !!! | GCTTTAAAGAACATTAGAAA+TGG | + | chr8.4:6545270-6545289 | MS.gene88645:intron | 25.0% |
| !!! | GGTTCAATTTTGATATCATT+AGG | + | chr8.4:6541589-6541608 | MS.gene88645:intron | 25.0% |
| !!! | TTTGTAAGTGTATTGATTAC+AGG | + | chr8.4:6543543-6543562 | MS.gene88645:intron | 25.0% |
| AAAGAACAATATCACAACAC+AGG | - | chr8.4:6545641-6545660 | None:intergenic | 30.0% | |
| AAATGAGAACGGAATTAAAG+TGG | - | chr8.4:6543038-6543057 | None:intergenic | 30.0% | |
| AAGAGAGAATTGAAGATGAT+AGG | - | chr8.4:6541206-6541225 | None:intergenic | 30.0% | |
| AATACATGAGATGAAGAAGA+AGG | + | chr8.4:6542201-6542220 | MS.gene88645:CDS | 30.0% | |
| AGAAAACACTAAGAATACCT+TGG | - | chr8.4:6544527-6544546 | None:intergenic | 30.0% | |
| AGAGAGAATTGAAGATGATA+GGG | - | chr8.4:6541205-6541224 | None:intergenic | 30.0% | |
| AGGAAAATCAATGAAACATG+GGG | - | chr8.4:6542875-6542894 | None:intergenic | 30.0% | |
| ATTATTAATTGCGTCCCAAT+TGG | + | chr8.4:6545605-6545624 | MS.gene88645:intron | 30.0% | |
| ATTGGAAGCCTGTAATAATA+TGG | + | chr8.4:6545543-6545562 | MS.gene88645:intron | 30.0% | |
| CAAAAATTTCTCTGATGCTT+GGG | - | chr8.4:6543190-6543209 | None:intergenic | 30.0% | |
| CAAGGAAAATCAATGAAACA+TGG | - | chr8.4:6542877-6542896 | None:intergenic | 30.0% | |
| CCTATTAGTTATGTTTATCG+AGG | + | chr8.4:6544989-6545008 | MS.gene88645:intron | 30.0% | |
| CCTCGATAAACATAACTAAT+AGG | - | chr8.4:6544992-6545011 | None:intergenic | 30.0% | |
| GAAAATCCAAAATCACATCA+AGG | - | chr8.4:6542895-6542914 | None:intergenic | 30.0% | |
| GATTTCTTAAATGCTCCTAA+CGG | + | chr8.4:6543577-6543596 | MS.gene88645:CDS | 30.0% | |
| GCTTGAAAGTTGAAATATGA+AGG | + | chr8.4:6543913-6543932 | MS.gene88645:intron | 30.0% | |
| GGATGGCAATAATAACTAAA+TGG | + | chr8.4:6543324-6543343 | MS.gene88645:intron | 30.0% | |
| GTTATGTTTATCGAGGTTAT+AGG | + | chr8.4:6544996-6545015 | MS.gene88645:intron | 30.0% | |
| TAACGTGTTCATTCTTTAAG+AGG | + | chr8.4:6542962-6542981 | MS.gene88645:intron | 30.0% | |
| TGTTTGTGTTTGGTTGTTAA+CGG | + | chr8.4:6543891-6543910 | MS.gene88645:intron | 30.0% | |
| TTCAACTATTAATGCTGACA+TGG | + | chr8.4:6545333-6545352 | MS.gene88645:intron | 30.0% | |
| TTGATCTGATTAAAATCCAC+TGG | + | chr8.4:6545163-6545182 | MS.gene88645:intron | 30.0% | |
| ! | AAAGGAATACATTAAGTTGC+AGG | + | chr8.4:6542225-6542244 | MS.gene88645:CDS | 30.0% |
| ! | AAGTGTTAACTCTCTTGTTT+AGG | + | chr8.4:6541960-6541979 | MS.gene88645:intron | 30.0% |
| ! | ACTTATAAGTCCATGTCTTT+TGG | + | chr8.4:6544278-6544297 | MS.gene88645:intron | 30.0% |
| ! | ATCTGATGTTTTATGGTGTT+TGG | + | chr8.4:6544169-6544188 | MS.gene88645:intron | 30.0% |
| ! | ATTTGATCTTCCTTTTCACA+TGG | + | chr8.4:6543760-6543779 | MS.gene88645:CDS | 30.0% |
| ! | CTACAACTCCTACTTTAAAA+TGG | + | chr8.4:6542114-6542133 | MS.gene88645:intron | 30.0% |
| ! | GATTTTCCTTGATGTGATTT+TGG | + | chr8.4:6542886-6542905 | MS.gene88645:intron | 30.0% |
| ! | GCTATTCATCTGATGTTTTA+TGG | + | chr8.4:6544162-6544181 | MS.gene88645:intron | 30.0% |
| ! | GTTTGTCTGTTTCATGTTTT+GGG | + | chr8.4:6544649-6544668 | MS.gene88645:intron | 30.0% |
| ! | TCATGTTTTCCTTTTTTTCC+CGG | - | chr8.4:6543352-6543371 | None:intergenic | 30.0% |
| ! | TGTTTGTCTGTTTCATGTTT+TGG | + | chr8.4:6544648-6544667 | MS.gene88645:intron | 30.0% |
| ! | TTCTAAGTCTAATAACTTGC+GGG | - | chr8.4:6542347-6542366 | None:intergenic | 30.0% |
| ! | TTTTTGCAGCTTCTCAATTT+GGG | - | chr8.4:6542013-6542032 | None:intergenic | 30.0% |
| !! | ACCAGTTGTATCTTTAAAAC+TGG | - | chr8.4:6545233-6545252 | None:intergenic | 30.0% |
| !! | AGCAGAAAATGCTGATTTAA+GGG | + | chr8.4:6542752-6542771 | MS.gene88645:CDS | 30.0% |
| !! | TAGCAGAAAATGCTGATTTA+AGG | + | chr8.4:6542751-6542770 | MS.gene88645:CDS | 30.0% |
| !! | TTATAGTGTGAATTTGTTGG+TGG | + | chr8.4:6544710-6544729 | MS.gene88645:intron | 30.0% |
| !! | TTTATGAGTTTGTTACTTGC+AGG | + | chr8.4:6543733-6543752 | MS.gene88645:intron | 30.0% |
| !!! | ATCAGAGAAATTTTTGGTGT+TGG | + | chr8.4:6543194-6543213 | MS.gene88645:intron | 30.0% |
| !!! | GAGCTAATCCATTTTAAAGT+AGG | - | chr8.4:6542125-6542144 | None:intergenic | 30.0% |
| !!! | GTTGTTTTTGAAAATGTGGT+AGG | + | chr8.4:6541463-6541482 | MS.gene88645:intron | 30.0% |
| !!! | TCCAGTTTTAAAGATACAAC+TGG | + | chr8.4:6545229-6545248 | MS.gene88645:intron | 30.0% |
| !!! | TGGTGTTGTTTTTGAAAATG+TGG | + | chr8.4:6541459-6541478 | MS.gene88645:intron | 30.0% |
| !!! | TGTTTGTTTTTGCTCTTTAG+CGG | + | chr8.4:6541886-6541905 | MS.gene88645:intron | 30.0% |
| AAACAGGATTCTAAATGCCT+TGG | - | chr8.4:6544096-6544115 | None:intergenic | 35.0% | |
| AAATGAGTTGTTCCCACAAT+AGG | - | chr8.4:6545193-6545212 | None:intergenic | 35.0% | |
| AACATTCAAAACTACGTGGA+TGG | - | chr8.4:6542482-6542501 | None:intergenic | 35.0% | |
| AACCAAATGTAACGAGTGAT+TGG | - | chr8.4:6541335-6541354 | None:intergenic | 35.0% | |
| AACCAATCACTCGTTACATT+TGG | + | chr8.4:6541330-6541349 | MS.gene88645:CDS | 35.0% | |
| AAGAAAGAAGAAAAAAGCCG+TGG | - | chr8.4:6544360-6544379 | None:intergenic | 35.0% | |
| AAGAAGAAAGAATCTAGGTC+GGG | + | chr8.4:6542424-6542443 | MS.gene88645:CDS | 35.0% | |
| AAGCAACATTCAAAACTACG+TGG | - | chr8.4:6542486-6542505 | None:intergenic | 35.0% | |
| AATATCACAACACAGGCATA+AGG | - | chr8.4:6545634-6545653 | None:intergenic | 35.0% | |
| ACATGGGGAAAAAAACACAT+AGG | - | chr8.4:6542860-6542879 | None:intergenic | 35.0% | |
| AGAATAGATCAAGTGAAGCA+GGG | - | chr8.4:6541359-6541378 | None:intergenic | 35.0% | |
| AGCAAAGATGGCTTCTATAA+AGG | + | chr8.4:6543811-6543830 | MS.gene88645:CDS | 35.0% | |
| AGTGTTGTGTAGTTAAATGC+CGG | - | chr8.4:6545458-6545477 | None:intergenic | 35.0% | |
| ATGTGCATAAACAGAAGGAA+GGG | + | chr8.4:6542550-6542569 | MS.gene88645:intron | 35.0% | |
| ATTCGCCGATGTAAACAATT+TGG | + | chr8.4:6541287-6541306 | MS.gene88645:CDS | 35.0% | |
| CAACGATGGATGAAAAACAA+AGG | - | chr8.4:6543416-6543435 | None:intergenic | 35.0% | |
| CATAAAATACATACCTCAGC+CGG | - | chr8.4:6544624-6544643 | None:intergenic | 35.0% | |
| CCAAAAATTTCTCTGATGCT+TGG | - | chr8.4:6543191-6543210 | None:intergenic | 35.0% | |
| CCTCAAACAAAATTGTTGCA+TGG | + | chr8.4:6544799-6544818 | MS.gene88645:intron | 35.0% | |
| CTTCAATTCTCTCTTTCGTA+GGG | + | chr8.4:6541211-6541230 | MS.gene88645:intron | 35.0% | |
| GAACTCTAATAAATCTGGTC+TGG | + | chr8.4:6543370-6543389 | MS.gene88645:intron | 35.0% | |
| GAAGAAGAAAGAATCTAGGT+CGG | + | chr8.4:6542423-6542442 | MS.gene88645:CDS | 35.0% | |
| GAATTTCAGAGGATGGTTAT+TGG | + | chr8.4:6542042-6542061 | MS.gene88645:CDS | 35.0% | |
| GACTTAGAAATATGAAAGGC+TGG | + | chr8.4:6542358-6542377 | MS.gene88645:intron | 35.0% | |
| GGGTTCGTGAAATAATTCAA+TGG | - | chr8.4:6542327-6542346 | None:intergenic | 35.0% | |
| GTATCATCGCATGATCATAT+TGG | + | chr8.4:6545515-6545534 | MS.gene88645:intron | 35.0% | |
| GTCGGATATATCAAGATATG+AGG | + | chr8.4:6541679-6541698 | MS.gene88645:CDS | 35.0% | |
| GTTAGCATTAGAGAGAAACT+TGG | + | chr8.4:6543099-6543118 | MS.gene88645:intron | 35.0% | |
| TAAAAATACTGCAGCTCTCA+AGG | + | chr8.4:6541987-6542006 | MS.gene88645:CDS | 35.0% | |
| TAAATGGAACCGGGAAAAAA+AGG | + | chr8.4:6543340-6543359 | MS.gene88645:intron | 35.0% | |
| TAAGAAACCCAAACTCAGAT+AGG | - | chr8.4:6544830-6544849 | None:intergenic | 35.0% | |
| TAAGATCTAAGTCTCCTTCA+GGG | - | chr8.4:6541062-6541081 | None:intergenic | 35.0% | |
| TCTCTCCTTTAACAAATCCA+CGG | + | chr8.4:6544340-6544359 | MS.gene88645:intron | 35.0% | |
| TCTGTGTTTGTTTGTGTGTT+TGG | + | chr8.4:6541619-6541638 | MS.gene88645:intron | 35.0% | |
| TCTTCAATTCTCTCTTTCGT+AGG | + | chr8.4:6541210-6541229 | MS.gene88645:intron | 35.0% | |
| TGAACAAAGACAACGGTAAT+TGG | + | chr8.4:6541568-6541587 | MS.gene88645:intron | 35.0% | |
| TGAAGGAGACTTAGATCTTA+GGG | + | chr8.4:6541062-6541081 | MS.gene88645:CDS | 35.0% | |
| TGAGATGAAGAAGAAGGAAA+AGG | + | chr8.4:6542207-6542226 | MS.gene88645:CDS | 35.0% | |
| TGGAGAAGAAGAAAGAATCT+AGG | + | chr8.4:6542419-6542438 | MS.gene88645:CDS | 35.0% | |
| TTACTGCAGCAGTACATATT+AGG | - | chr8.4:6544565-6544584 | None:intergenic | 35.0% | |
| TTGTGATGTGCATAAACAGA+AGG | + | chr8.4:6542545-6542564 | MS.gene88645:intron | 35.0% | |
| ! | ATAAGTCCATGTCTTTTGGT+GGG | + | chr8.4:6544282-6544301 | MS.gene88645:intron | 35.0% |
| ! | CCAAGCATCAGAGAAATTTT+TGG | + | chr8.4:6543188-6543207 | MS.gene88645:intron | 35.0% |
| ! | CTTTTTGCAGCTTCTCAATT+TGG | - | chr8.4:6542014-6542033 | None:intergenic | 35.0% |
| ! | GAATACATTAAGTTGCAGGT+AGG | + | chr8.4:6542229-6542248 | MS.gene88645:intron | 35.0% |
| ! | GGAGATAATGAATTTGCTTC+AGG | + | chr8.4:6542450-6542469 | MS.gene88645:CDS | 35.0% |
| ! | TATAAGTCCATGTCTTTTGG+TGG | + | chr8.4:6544281-6544300 | MS.gene88645:intron | 35.0% |
| ! | TCATTCTTTAAGAGGTCTCT+GGG | + | chr8.4:6542970-6542989 | MS.gene88645:intron | 35.0% |
| ! | TTCATTCTTTAAGAGGTCTC+TGG | + | chr8.4:6542969-6542988 | MS.gene88645:intron | 35.0% |
| ! | TTTCATTAGTAGTGGGAGAT+TGG | - | chr8.4:6543612-6543631 | None:intergenic | 35.0% |
| !! | AAAAGCCGTGGATTTGTTAA+AGG | - | chr8.4:6544348-6544367 | None:intergenic | 35.0% |
| !! | AGATACAACTGGTTTGTACT+AGG | + | chr8.4:6545240-6545259 | MS.gene88645:intron | 35.0% |
| !! | CCATGCAACAATTTTGTTTG+AGG | - | chr8.4:6544802-6544821 | None:intergenic | 35.0% |
| !! | GTAAGTGTATTGATTACAGG+TGG | + | chr8.4:6543546-6543565 | MS.gene88645:intron | 35.0% |
| !!! | AGAGAAATTTTTGGTGTTGG+TGG | + | chr8.4:6543197-6543216 | MS.gene88645:intron | 35.0% |
| !!! | TCTGTTTCATGTTTTGGGTT+GGG | + | chr8.4:6544654-6544673 | MS.gene88645:intron | 35.0% |
| !!! | TTGTTTTGGGTACAATCTAG+TGG | + | chr8.4:6541917-6541936 | MS.gene88645:intron | 35.0% |
| AACATCTTGCAAAGTCTGAC+AGG | + | chr8.4:6544501-6544520 | MS.gene88645:CDS | 40.0% | |
| AAGAGAGGGATGAATTTCAG+AGG | + | chr8.4:6542031-6542050 | MS.gene88645:CDS | 40.0% | |
| AAGATCTAAGTCTCCTTCAG+GGG | - | chr8.4:6541061-6541080 | None:intergenic | 40.0% | |
| AGAGAGTCTAAGAGCAAAGA+TGG | + | chr8.4:6543799-6543818 | MS.gene88645:CDS | 40.0% | |
| AGCATTAGAGAGAAACTTGG+AGG | + | chr8.4:6543102-6543121 | MS.gene88645:intron | 40.0% | |
| AGGAAAAACCTCATGAATGG+TGG | + | chr8.4:6543122-6543141 | MS.gene88645:intron | 40.0% | |
| ATAGAACAACGGCCTTTACA+AGG | - | chr8.4:6543473-6543492 | None:intergenic | 40.0% | |
| ATTGCAACAAGTTAGGTCCA+AGG | + | chr8.4:6544076-6544095 | MS.gene88645:intron | 40.0% | |
| ATTGCAAGATGCTCAGAAAG+AGG | + | chr8.4:6543949-6543968 | MS.gene88645:CDS | 40.0% | |
| ATTGTTGAGATCAATGCAGG+TGG | + | chr8.4:6542776-6542795 | MS.gene88645:intron | 40.0% | |
| CTAAGATCTAAGTCTCCTTC+AGG | - | chr8.4:6541063-6541082 | None:intergenic | 40.0% | |
| CTCATGAATGGTGGTTGTAT+GGG | + | chr8.4:6543131-6543150 | MS.gene88645:intron | 40.0% | |
| CTCTAATAAATCTGGTCTGG+TGG | + | chr8.4:6543373-6543392 | MS.gene88645:intron | 40.0% | |
| CTGAAGGAGACTTAGATCTT+AGG | + | chr8.4:6541061-6541080 | MS.gene88645:CDS | 40.0% | |
| CTGCGAATGAACAAAGACAA+CGG | + | chr8.4:6541561-6541580 | MS.gene88645:CDS | 40.0% | |
| CTGTACTTCCTTCCTTGTAA+AGG | + | chr8.4:6543458-6543477 | MS.gene88645:intron | 40.0% | |
| CTTTCTGAGCATCTTGCAAT+TGG | - | chr8.4:6543949-6543968 | None:intergenic | 40.0% | |
| GAGAATAGATCAAGTGAAGC+AGG | - | chr8.4:6541360-6541379 | None:intergenic | 40.0% | |
| GAGTTTGACAATGCGAACAA+AGG | - | chr8.4:6543704-6543723 | None:intergenic | 40.0% | |
| GATAGCGACGATAACTAGAA+CGG | + | chr8.4:6541748-6541767 | MS.gene88645:CDS | 40.0% | |
| GATATGAGGCTAAAGTTGAG+AGG | + | chr8.4:6541693-6541712 | MS.gene88645:CDS | 40.0% | |
| GATGTGCATAAACAGAAGGA+AGG | + | chr8.4:6542549-6542568 | MS.gene88645:intron | 40.0% | |
| GCCACGGACAATTATCAAAA+GGG | - | chr8.4:6545398-6545417 | None:intergenic | 40.0% | |
| GGCTAATCCTATCTGAGTTT+GGG | + | chr8.4:6544820-6544839 | MS.gene88645:intron | 40.0% | |
| GTGAAAGCAGAATGAGAAGA+TGG | - | chr8.4:6541164-6541183 | None:intergenic | 40.0% | |
| TAATCCTTCACATTCTCCGA+TGG | + | chr8.4:6543642-6543661 | MS.gene88645:CDS | 40.0% | |
| TCTCATTCTGCTTTCACAAC+CGG | + | chr8.4:6541167-6541186 | MS.gene88645:CDS | 40.0% | |
| TCTCGCAATTGCAACAAGTT+AGG | + | chr8.4:6544069-6544088 | MS.gene88645:intron | 40.0% | |
| TCTTCTTCTCCATCAACACT+TGG | - | chr8.4:6542411-6542430 | None:intergenic | 40.0% | |
| TGAGAAGCTGCAAAAAGAGA+GGG | + | chr8.4:6542017-6542036 | MS.gene88645:CDS | 40.0% | |
| TGATCTCTAGCCATGTGAAA+AGG | - | chr8.4:6543773-6543792 | None:intergenic | 40.0% | |
| TGATGCAAAGTCCAATTGGA+CGG | + | chr8.4:6543296-6543315 | MS.gene88645:intron | 40.0% | |
| TGGAGGAAAAACCTCATGAA+TGG | + | chr8.4:6543119-6543138 | MS.gene88645:intron | 40.0% | |
| TGGCTAATCCTATCTGAGTT+TGG | + | chr8.4:6544819-6544838 | MS.gene88645:intron | 40.0% | |
| TGTGGTAGGTTTCTATAGCA+AGG | + | chr8.4:6541477-6541496 | MS.gene88645:intron | 40.0% | |
| TTGAGAAGCTGCAAAAAGAG+AGG | + | chr8.4:6542016-6542035 | MS.gene88645:CDS | 40.0% | |
| TTGTTGAGATCAATGCAGGT+GGG | + | chr8.4:6542777-6542796 | MS.gene88645:intron | 40.0% | |
| ! | AATGGTGGTTGTATGGGTTT+TGG | + | chr8.4:6543137-6543156 | MS.gene88645:intron | 40.0% |
| ! | AGTGCTGGATCATGCTAATT+TGG | + | chr8.4:6544412-6544431 | MS.gene88645:intron | 40.0% |
| ! | ATTCGTGCTGCTATATGGTA+GGG | + | chr8.4:6542295-6542314 | MS.gene88645:intron | 40.0% |
| ! | GAGGATGGTTATTGGTAATC+AGG | + | chr8.4:6542050-6542069 | MS.gene88645:CDS | 40.0% |
| ! | TTAGTAGTGGGAGATTGGTT+TGG | - | chr8.4:6543607-6543626 | None:intergenic | 40.0% |
| ! | TTGAAATATGAAGGAGCGCA+TGG | + | chr8.4:6543922-6543941 | MS.gene88645:intron | 40.0% |
| ! | TTGGTGGTTGCATATCTCAT+TGG | + | chr8.4:6543156-6543175 | MS.gene88645:intron | 40.0% |
| !! | AAGCTCAACTTGTTGAAGCA+AGG | + | chr8.4:6544014-6544033 | MS.gene88645:CDS | 40.0% |
| !! | AAGGAGCATTATACAAGAGC+AGG | + | chr8.4:6544033-6544052 | MS.gene88645:CDS | 40.0% |
| !! | ACCCTTTTGATAATTGTCCG+TGG | + | chr8.4:6545394-6545413 | MS.gene88645:intron | 40.0% |
| !! | AGTGTGAATTTGTTGGTGGT+TGG | + | chr8.4:6544714-6544733 | MS.gene88645:intron | 40.0% |
| !! | CTTTTGATAATTGTCCGTGG+CGG | + | chr8.4:6545397-6545416 | MS.gene88645:intron | 40.0% |
| !! | GAGACTAAACCAAGTGTTGA+TGG | + | chr8.4:6542399-6542418 | MS.gene88645:CDS | 40.0% |
| !! | GGGAGGTTAGGATTTGTTTT+GGG | + | chr8.4:6544943-6544962 | MS.gene88645:intron | 40.0% |
| !! | GGTTGGTGGAAAAGTATCTT+TGG | + | chr8.4:6544731-6544750 | MS.gene88645:intron | 40.0% |
| !! | GTCTGTTTCATGTTTTGGGT+TGG | + | chr8.4:6544653-6544672 | MS.gene88645:intron | 40.0% |
| !! | TAGCGGTGGGATTTTTGTTT+TGG | + | chr8.4:6541903-6541922 | MS.gene88645:intron | 40.0% |
| !! | TGGGAGGTTAGGATTTGTTT+TGG | + | chr8.4:6544942-6544961 | MS.gene88645:intron | 40.0% |
| !! | TGTTTTTGCTCTTTAGCGGT+GGG | + | chr8.4:6541890-6541909 | MS.gene88645:intron | 40.0% |
| !! | TTGGTGATGCAAAGTCCAAT+TGG | + | chr8.4:6543292-6543311 | MS.gene88645:intron | 40.0% |
| !! | TTTTGGGTACAATCTAGTGG+TGG | + | chr8.4:6541920-6541939 | MS.gene88645:intron | 40.0% |
| !!! | AGCGGTGGGATTTTTGTTTT+GGG | + | chr8.4:6541904-6541923 | MS.gene88645:intron | 40.0% |
| !!! | AGTTTTTTTGACAACCGCCA+CGG | - | chr8.4:6545414-6545433 | None:intergenic | 40.0% |
| !!! | GAGGTTAGGATTTGTTTTGG+GGG | + | chr8.4:6544945-6544964 | MS.gene88645:intron | 40.0% |
| !!! | GGAGGTTAGGATTTGTTTTG+GGG | + | chr8.4:6544944-6544963 | MS.gene88645:intron | 40.0% |
| !!! | TTGTTTTTGCTCTTTAGCGG+TGG | + | chr8.4:6541889-6541908 | MS.gene88645:intron | 40.0% |
| AACAACGGCCTTTACAAGGA+AGG | - | chr8.4:6543469-6543488 | None:intergenic | 45.0% | |
| AAGTCCAATTGGACGGAGAT+TGG | + | chr8.4:6543303-6543322 | MS.gene88645:intron | 45.0% | |
| ACAGGCATAAGGTGACCAAT+TGG | - | chr8.4:6545623-6545642 | None:intergenic | 45.0% | |
| ATGAAAGGTGGACGCTTATG+AGG | + | chr8.4:6542710-6542729 | MS.gene88645:intron | 45.0% | |
| CAGGCATAAGGTGACCAATT+GGG | - | chr8.4:6545622-6545641 | None:intergenic | 45.0% | |
| CATACCGTTCTTCCAACCAT+CGG | - | chr8.4:6543661-6543680 | None:intergenic | 45.0% | |
| CCATACAACCACCATTCATG+AGG | - | chr8.4:6543133-6543152 | None:intergenic | 45.0% | |
| CCTCATGAATGGTGGTTGTA+TGG | + | chr8.4:6543130-6543149 | MS.gene88645:intron | 45.0% | |
| CGCCACGGACAATTATCAAA+AGG | - | chr8.4:6545399-6545418 | None:intergenic | 45.0% | |
| CTATCAACACCACAGAGACA+CGG | - | chr8.4:6545360-6545379 | None:intergenic | 45.0% | |
| CTCATTCTGCTTTCACAACC+GGG | + | chr8.4:6541168-6541187 | MS.gene88645:CDS | 45.0% | |
| GAAAGAGGCAGAAGTCACTT+CGG | + | chr8.4:6543964-6543983 | MS.gene88645:CDS | 45.0% | |
| GAGGGATGAATTTCAGAGGA+TGG | + | chr8.4:6542035-6542054 | MS.gene88645:CDS | 45.0% | |
| GCTAAAGTTGAGAGGCTTGA+TGG | + | chr8.4:6541701-6541720 | MS.gene88645:CDS | 45.0% | |
| GGCATTGTTGAGATCAATGC+AGG | + | chr8.4:6542773-6542792 | MS.gene88645:CDS | 45.0% | |
| GTGGTTGCATATCTCATTGG+AGG | + | chr8.4:6543159-6543178 | MS.gene88645:intron | 45.0% | |
| GTGTAGTTAAATGCCGGTCA+TGG | - | chr8.4:6545452-6545471 | None:intergenic | 45.0% | |
| TAGTTAAATGCCGGTCATGG+CGG | - | chr8.4:6545449-6545468 | None:intergenic | 45.0% | |
| TCGATTACGCGCATGCAAAT+GGG | + | chr8.4:6544923-6544942 | MS.gene88645:intron | 45.0% | |
| TGCATAAACAGAAGGAAGGG+AGG | + | chr8.4:6542553-6542572 | MS.gene88645:intron | 45.0% | |
| TTCTCCGATGGTTGGAAGAA+CGG | + | chr8.4:6543654-6543673 | MS.gene88645:CDS | 45.0% | |
| ! | ATTTTACAGGGAATCGGCAC+CGG | + | chr8.4:6544602-6544621 | MS.gene88645:intron | 45.0% |
| ! | GATTCGTGCTGCTATATGGT+AGG | + | chr8.4:6542294-6542313 | MS.gene88645:intron | 45.0% |
| ! | GGCTGGTACATTTTACTTGC+AGG | + | chr8.4:6542375-6542394 | MS.gene88645:intron | 45.0% |
| ! | GTTGAGTACCCTGCTTTAGA+GGG | - | chr8.4:6543510-6543529 | None:intergenic | 45.0% |
| ! | TGGTGATTCGTGCTGCTATA+TGG | + | chr8.4:6542290-6542309 | MS.gene88645:intron | 45.0% |
| !! | ATCCACTGGCTTTCCTATTG+TGG | + | chr8.4:6545177-6545196 | MS.gene88645:intron | 45.0% |
| !! | GATCGGTGCTAAAGCAAGTT+AGG | + | chr8.4:6542170-6542189 | MS.gene88645:intron | 45.0% |
| !! | GATTGGTTTGGTAGTCCGTT+AGG | - | chr8.4:6543595-6543614 | None:intergenic | 45.0% |
| !! | GTGAATTTGTTGGTGGTTGG+TGG | + | chr8.4:6544717-6544736 | MS.gene88645:intron | 45.0% |
| !! | GTGTCTCTGTGGTGTTGATA+GGG | + | chr8.4:6545359-6545378 | MS.gene88645:intron | 45.0% |
| !! | TCCACTGGCTTTCCTATTGT+GGG | + | chr8.4:6545178-6545197 | MS.gene88645:intron | 45.0% |
| !! | TGTCTCTGTGGTGTTGATAG+GGG | + | chr8.4:6545360-6545379 | MS.gene88645:intron | 45.0% |
| !! | TTGAGTACCCTGCTTTAGAG+GGG | - | chr8.4:6543509-6543528 | None:intergenic | 45.0% |
| !!! | GATAGGGTTTTGAACTGACC+CGG | - | chr8.4:6541189-6541208 | None:intergenic | 45.0% |
| !! | TTATTTATTATAATAATGAA+AGG | + | chr8.4:6542695-6542714 | MS.gene88645:intron | 5.0% |
| AGGCAACGTGGAACATGGAA+TGG | + | chr8.4:6542573-6542592 | MS.gene88645:CDS | 50.0% | |
| ATTACGCGCATGCAAATGGG+AGG | + | chr8.4:6544926-6544945 | MS.gene88645:intron | 50.0% | |
| ATTCCTCTGCTAGCAGCAGA+AGG | + | chr8.4:6545308-6545327 | MS.gene88645:intron | 50.0% | |
| CCAACCATCGGAGAATGTGA+AGG | - | chr8.4:6543649-6543668 | None:intergenic | 50.0% | |
| CCAATTGGACGGAGATTGGA+TGG | + | chr8.4:6543307-6543326 | MS.gene88645:intron | 50.0% | |
| CCATCCAATCTCCGTCCAAT+TGG | - | chr8.4:6543310-6543329 | None:intergenic | 50.0% | |
| CCTTCACATTCTCCGATGGT+TGG | + | chr8.4:6543646-6543665 | MS.gene88645:CDS | 50.0% | |
| CGACGATAACTAGAACGGTG+AGG | + | chr8.4:6541753-6541772 | MS.gene88645:intron | 50.0% | |
| CGATGGTTGGAAGAACGGTA+TGG | + | chr8.4:6543659-6543678 | MS.gene88645:intron | 50.0% | |
| GAAAGAATCTAGGTCGGGCA+TGG | + | chr8.4:6542429-6542448 | MS.gene88645:CDS | 50.0% | |
| GACAGTACTTTGCTCAGTGC+TGG | + | chr8.4:6544397-6544416 | MS.gene88645:intron | 50.0% | |
| GGCAACGTGGAACATGGAAT+GGG | + | chr8.4:6542574-6542593 | MS.gene88645:CDS | 50.0% | |
| GGTTGAGTACCCTGCTTTAG+AGG | - | chr8.4:6543511-6543530 | None:intergenic | 50.0% | |
| GTCGATTACGCGCATGCAAA+TGG | + | chr8.4:6544922-6544941 | MS.gene88645:intron | 50.0% | |
| TCCCACAATAGGAAAGCCAG+TGG | - | chr8.4:6545182-6545201 | None:intergenic | 50.0% | |
| TCTAAGTCTCCTTCAGGGGA+AGG | - | chr8.4:6541057-6541076 | None:intergenic | 50.0% | |
| TTCCTCTGCTAGCAGCAGAA+GGG | + | chr8.4:6545309-6545328 | MS.gene88645:intron | 50.0% | |
| TTGCAAAGTCTGACAGGCCA+AGG | + | chr8.4:6544507-6544526 | MS.gene88645:CDS | 50.0% | |
| !! | CGTGTCTCTGTGGTGTTGAT+AGG | + | chr8.4:6545358-6545377 | MS.gene88645:intron | 50.0% |
| !! | GCACTGAGCAAAGTACTGTC+AGG | - | chr8.4:6544397-6544416 | None:intergenic | 50.0% |
| !! | GGTGGTTGTATGGGTTTTGG+TGG | + | chr8.4:6543140-6543159 | MS.gene88645:intron | 50.0% |
| !! | TGAGTACCCTGCTTTAGAGG+GGG | - | chr8.4:6543508-6543527 | None:intergenic | 50.0% |
| !! | TGTTGGTGGTTGTTGCTGAC+TGG | + | chr8.4:6543211-6543230 | MS.gene88645:intron | 50.0% |
| !!! | TGTTTTGGGGGTCTTACTCC+TGG | + | chr8.4:6544957-6544976 | MS.gene88645:intron | 50.0% |
| AAGGGAGGCAACGTGGAACA+TGG | + | chr8.4:6542568-6542587 | MS.gene88645:CDS | 55.0% | |
| CACACCATTTCCGCCATGAC+CGG | + | chr8.4:6545436-6545455 | MS.gene88645:intron | 55.0% | |
| GCGCATGCAAATGGGAGGTT+AGG | + | chr8.4:6544931-6544950 | MS.gene88645:intron | 55.0% | |
| GCTGCACCCACCAAAAGACA+TGG | - | chr8.4:6544291-6544310 | None:intergenic | 55.0% | |
| TCCTCTGCTAGCAGCAGAAG+GGG | + | chr8.4:6545310-6545329 | MS.gene88645:intron | 55.0% | |
| TGACATGGTCCGTGTCTCTG+TGG | + | chr8.4:6545348-6545367 | MS.gene88645:intron | 55.0% | |
| ! | AATGCCGGTCATGGCGGAAA+TGG | - | chr8.4:6545443-6545462 | None:intergenic | 55.0% |
| !! | CTCTGTGGTGTTGATAGGGG+TGG | + | chr8.4:6545363-6545382 | MS.gene88645:intron | 55.0% |
| !! | GAGTACCCTGCTTTAGAGGG+GGG | - | chr8.4:6543507-6543526 | None:intergenic | 55.0% |
| ACCCCTTCTGCTGCTAGCAG+AGG | - | chr8.4:6545314-6545333 | None:intergenic | 60.0% | |
| CAGAAGGAAGGGAGGCAACG+TGG | + | chr8.4:6542561-6542580 | MS.gene88645:intron | 60.0% | |
| ! | CGGTCATGGCGGAAATGGTG+TGG | - | chr8.4:6545438-6545457 | None:intergenic | 60.0% |
| !! | ACCCACCCCCCTCTAAAGCA+GGG | + | chr8.4:6543499-6543518 | MS.gene88645:intron | 60.0% |
| !! | ACCCTGCTTTAGAGGGGGGT+GGG | - | chr8.4:6543503-6543522 | None:intergenic | 60.0% |
| !! | GGTGTTGATAGGGGTGGTGC+TGG | + | chr8.4:6545369-6545388 | MS.gene88645:intron | 60.0% |
| !! | TACCCACCCCCCTCTAAAGC+AGG | + | chr8.4:6543498-6543517 | MS.gene88645:intron | 60.0% |
| !! | TACCCTGCTTTAGAGGGGGG+TGG | - | chr8.4:6543504-6543523 | None:intergenic | 60.0% |
| !! | CAGGGAATCGGCACCGGCTG+AGG | + | chr8.4:6544608-6544627 | MS.gene88645:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 6541051 | 6545687 | 6541051 | ID=MS.gene88645 |
| chr8.4 | mRNA | 6541051 | 6545687 | 6541051 | ID=MS.gene88645.t1;Parent=MS.gene88645 |
| chr8.4 | exon | 6541051 | 6541083 | 6541051 | ID=MS.gene88645.t1.exon1;Parent=MS.gene88645.t1 |
| chr8.4 | CDS | 6541051 | 6541083 | 6541051 | ID=cds.MS.gene88645.t1;Parent=MS.gene88645.t1 |
| chr8.4 | exon | 6541161 | 6541189 | 6541161 | ID=MS.gene88645.t1.exon2;Parent=MS.gene88645.t1 |
| chr8.4 | CDS | 6541161 | 6541189 | 6541161 | ID=cds.MS.gene88645.t1;Parent=MS.gene88645.t1 |
| chr8.4 | exon | 6541278 | 6541389 | 6541278 | ID=MS.gene88645.t1.exon3;Parent=MS.gene88645.t1 |
| chr8.4 | CDS | 6541278 | 6541389 | 6541278 | ID=cds.MS.gene88645.t1;Parent=MS.gene88645.t1 |
| chr8.4 | exon | 6541485 | 6541582 | 6541485 | ID=MS.gene88645.t1.exon4;Parent=MS.gene88645.t1 |
| chr8.4 | CDS | 6541485 | 6541582 | 6541485 | ID=cds.MS.gene88645.t1;Parent=MS.gene88645.t1 |
| chr8.4 | exon | 6541673 | 6541769 | 6541673 | ID=MS.gene88645.t1.exon5;Parent=MS.gene88645.t1 |
| chr8.4 | CDS | 6541673 | 6541769 | 6541673 | ID=cds.MS.gene88645.t1;Parent=MS.gene88645.t1 |
| chr8.4 | exon | 6541982 | 6542071 | 6541982 | ID=MS.gene88645.t1.exon6;Parent=MS.gene88645.t1 |
| chr8.4 | CDS | 6541982 | 6542071 | 6541982 | ID=cds.MS.gene88645.t1;Parent=MS.gene88645.t1 |
| chr8.4 | exon | 6542184 | 6542246 | 6542184 | ID=MS.gene88645.t1.exon7;Parent=MS.gene88645.t1 |
| chr8.4 | CDS | 6542184 | 6542246 | 6542184 | ID=cds.MS.gene88645.t1;Parent=MS.gene88645.t1 |
| chr8.4 | exon | 6542397 | 6542471 | 6542397 | ID=MS.gene88645.t1.exon8;Parent=MS.gene88645.t1 |
| chr8.4 | CDS | 6542397 | 6542471 | 6542397 | ID=cds.MS.gene88645.t1;Parent=MS.gene88645.t1 |
| chr8.4 | exon | 6542564 | 6542629 | 6542564 | ID=MS.gene88645.t1.exon9;Parent=MS.gene88645.t1 |
| chr8.4 | CDS | 6542564 | 6542629 | 6542564 | ID=cds.MS.gene88645.t1;Parent=MS.gene88645.t1 |
| chr8.4 | exon | 6542717 | 6542794 | 6542717 | ID=MS.gene88645.t1.exon10;Parent=MS.gene88645.t1 |
| chr8.4 | CDS | 6542717 | 6542794 | 6542717 | ID=cds.MS.gene88645.t1;Parent=MS.gene88645.t1 |
| chr8.4 | exon | 6543565 | 6543675 | 6543565 | ID=MS.gene88645.t1.exon11;Parent=MS.gene88645.t1 |
| chr8.4 | CDS | 6543565 | 6543675 | 6543565 | ID=cds.MS.gene88645.t1;Parent=MS.gene88645.t1 |
| chr8.4 | exon | 6543755 | 6543832 | 6543755 | ID=MS.gene88645.t1.exon12;Parent=MS.gene88645.t1 |
| chr8.4 | CDS | 6543755 | 6543832 | 6543755 | ID=cds.MS.gene88645.t1;Parent=MS.gene88645.t1 |
| chr8.4 | exon | 6543935 | 6544054 | 6543935 | ID=MS.gene88645.t1.exon13;Parent=MS.gene88645.t1 |
| chr8.4 | CDS | 6543935 | 6544054 | 6543935 | ID=cds.MS.gene88645.t1;Parent=MS.gene88645.t1 |
| chr8.4 | exon | 6544485 | 6544528 | 6544485 | ID=MS.gene88645.t1.exon14;Parent=MS.gene88645.t1 |
| chr8.4 | CDS | 6544485 | 6544528 | 6544485 | ID=cds.MS.gene88645.t1;Parent=MS.gene88645.t1 |
| chr8.4 | exon | 6544611 | 6544629 | 6544611 | ID=MS.gene88645.t1.exon15;Parent=MS.gene88645.t1 |
| chr8.4 | CDS | 6544611 | 6544629 | 6544611 | ID=cds.MS.gene88645.t1;Parent=MS.gene88645.t1 |
| chr8.4 | exon | 6545673 | 6545687 | 6545673 | ID=MS.gene88645.t1.exon16;Parent=MS.gene88645.t1 |
| chr8.4 | CDS | 6545673 | 6545687 | 6545673 | ID=cds.MS.gene88645.t1;Parent=MS.gene88645.t1 |
| Gene Sequence |
| Protein sequence |
