Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91415.t1 | XP_013469863.1 | 90.8 | 347 | 32 | 0 | 1 | 347 | 1 | 347 | 2.20E-176 | 628.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91415.t1 | Q5T280 | 47.0 | 300 | 153 | 4 | 49 | 344 | 74 | 371 | 1.1e-67 | 258.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91415.t1 | A0A072VQH5 | 90.8 | 347 | 32 | 0 | 1 | 347 | 1 | 347 | 1.6e-176 | 628.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene08205 | MS.gene91415 | PPI |
| MS.gene91415 | MS.gene003501 | PPI |
| MS.gene91415 | MS.gene90954 | PPI |
| MS.gene91415 | MS.gene000714 | PPI |
| MS.gene91415 | MS.gene038800 | PPI |
| MS.gene51868 | MS.gene91415 | PPI |
| MS.gene91415 | MS.gene90957 | PPI |
| MS.gene91415 | MS.gene044498 | PPI |
| MS.gene91415 | MS.gene033017 | PPI |
| MS.gene91415 | MS.gene067809 | PPI |
| MS.gene91415 | MS.gene52097 | PPI |
| MS.gene68979 | MS.gene91415 | PPI |
| MS.gene91415 | MS.gene057730 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91415.t1 | MTR_1g105065 | 95.677 | 347 | 15 | 0 | 1 | 347 | 1 | 347 | 0.0 | 667 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91415.t1 | AT5G19300 | 68.153 | 314 | 96 | 3 | 34 | 345 | 84 | 395 | 4.08e-155 | 441 |
Find 95 sgRNAs with CRISPR-Local
Find 375 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAGCATTGCTCGGCTTAT+TGG | 0.172731 | 1.3:+71741637 | None:intergenic |
| TCATCGATGTTGCCATTTAT+TGG | 0.179774 | 1.3:+71746855 | None:intergenic |
| AGTTGATGTTGGCTTATTTA+AGG | 0.186095 | 1.3:-71744713 | MS.gene91415:intron |
| TGAGGAAGATGATAACTTTA+AGG | 0.223818 | 1.3:-71742351 | MS.gene91415:intron |
| CCATTTATTGGGTTTGGTTC+AGG | 0.241598 | 1.3:+71746867 | None:intergenic |
| GCCAACCGCAATTTGGATTA+TGG | 0.253118 | 1.3:-71743718 | MS.gene91415:intron |
| TTCTTCCGGGTTCAAGTATT+TGG | 0.255682 | 1.3:+71743761 | None:intergenic |
| CATCGATGTTGCCATTTATT+GGG | 0.278770 | 1.3:+71746856 | None:intergenic |
| CATGGGCGCCAACCGCAATT+TGG | 0.285952 | 1.3:-71743725 | MS.gene91415:CDS |
| TAGGGAAGAAGGAGCATATT+GGG | 0.306398 | 1.3:-71743364 | MS.gene91415:CDS |
| CCTGAACCAAACCCAATAAA+TGG | 0.310870 | 1.3:-71746867 | MS.gene91415:CDS |
| CCCACTCATGTTTGCGCAAA+TGG | 0.317819 | 1.3:+71746130 | None:intergenic |
| ACCAATAAGCCGAGCAATGC+TGG | 0.317878 | 1.3:-71741638 | MS.gene91415:CDS |
| GGCGACAGTAACTCTTCTTC+CGG | 0.318602 | 1.3:+71743747 | None:intergenic |
| AATAAAAGTAATACAGATAA+AGG | 0.356965 | 1.3:-71746415 | MS.gene91415:CDS |
| TTATTCCGCACCGGATAATT+CGG | 0.364342 | 1.3:-71746392 | MS.gene91415:CDS |
| TTTAAATACATGTCCACATC+AGG | 0.364943 | 1.3:-71741847 | MS.gene91415:CDS |
| AGACATTTATTGATTGCCTT+TGG | 0.377473 | 1.3:-71742401 | MS.gene91415:CDS |
| TGCTCCTTCTTCCCTAGGCT+TGG | 0.378296 | 1.3:+71743371 | None:intergenic |
| CTTTGGCGGATTGGCTGGTT+TGG | 0.380876 | 1.3:-71742384 | MS.gene91415:CDS |
| TTGCTCGGCTTATTGGTTCT+TGG | 0.394746 | 1.3:+71741644 | None:intergenic |
| GCATAACAGCTTAAGATTTG+TGG | 0.397795 | 1.3:-71746284 | MS.gene91415:intron |
| ATGTTGCCATTTATTGGGTT+TGG | 0.399709 | 1.3:+71746861 | None:intergenic |
| AGCTTGAAATACCATCCTTC+AGG | 0.412173 | 1.3:-71743106 | MS.gene91415:intron |
| TTGAGACACCTCAGTATTTG+AGG | 0.414769 | 1.3:-71746324 | MS.gene91415:CDS |
| CAATATGCTCCTTCTTCCCT+AGG | 0.415928 | 1.3:+71743366 | None:intergenic |
| GCGACAGTAACTCTTCTTCC+GGG | 0.421324 | 1.3:+71743748 | None:intergenic |
| CTAGGGAAGAAGGAGCATAT+TGG | 0.429341 | 1.3:-71743365 | MS.gene91415:CDS |
| ATTGCCTTTGGCGGATTGGC+TGG | 0.434730 | 1.3:-71742389 | MS.gene91415:CDS |
| ACATGAGTGGGGTCCGTATC+GGG | 0.438663 | 1.3:-71746118 | MS.gene91415:CDS |
| TATTGGGTTTGGTTCAGGTT+CGG | 0.453688 | 1.3:+71746872 | None:intergenic |
| CAAATTGCGGTTGGCGCCCA+TGG | 0.453787 | 1.3:+71743726 | None:intergenic |
| TTCGGATGATGAAAGTAGTT+CGG | 0.454347 | 1.3:-71746374 | MS.gene91415:CDS |
| ATTGATTGCCTTTGGCGGAT+TGG | 0.456827 | 1.3:-71742393 | MS.gene91415:CDS |
| AATCTTAAGCTGTTATGCAT+TGG | 0.463655 | 1.3:+71746289 | None:intergenic |
| CAACTCTTGAACTCGCTACT+CGG | 0.468723 | 1.3:-71746728 | MS.gene91415:CDS |
| CATTTATTGATTGCCTTTGG+CGG | 0.469674 | 1.3:-71742398 | MS.gene91415:CDS |
| CATTAGCAACCTCATTGATT+CGG | 0.476477 | 1.3:+71746555 | None:intergenic |
| CTTTCATCATCCGAATTATC+CGG | 0.480182 | 1.3:+71746382 | None:intergenic |
| AGTTGGAACGTTGTCAATGA+TGG | 0.483106 | 1.3:+71746746 | None:intergenic |
| ACCATAATCCAAATTGCGGT+TGG | 0.503863 | 1.3:+71743717 | None:intergenic |
| AACATGAGTGGGGTCCGTAT+CGG | 0.504197 | 1.3:-71746119 | MS.gene91415:CDS |
| AAGAAAGACATTCAAACTCC+GGG | 0.512731 | 1.3:-71744744 | MS.gene91415:CDS |
| TCATCCAAGCCTAGGGAAGA+AGG | 0.513329 | 1.3:-71743375 | MS.gene91415:CDS |
| AACATCAACTAGCGTTGCCC+CGG | 0.521910 | 1.3:+71744726 | None:intergenic |
| AAAGAAAGACATTCAAACTC+CGG | 0.529826 | 1.3:-71744745 | MS.gene91415:CDS |
| GGGGCAACGCTAGTTGATGT+TGG | 0.530539 | 1.3:-71744724 | MS.gene91415:CDS |
| TTGTCTCATCATCCAAGCCT+AGG | 0.537203 | 1.3:-71743383 | MS.gene91415:CDS |
| CCATTTGCGCAAACATGAGT+GGG | 0.538873 | 1.3:-71746130 | MS.gene91415:CDS |
| AACTCTTGAACTCGCTACTC+GGG | 0.543550 | 1.3:-71746727 | MS.gene91415:intron |
| GCAAATGGTGTGGAGCATCA+AGG | 0.551811 | 1.3:+71746145 | None:intergenic |
| GATTACCATAATCCAAATTG+CGG | 0.555577 | 1.3:+71743713 | None:intergenic |
| CCAATAAGCCGAGCAATGCT+GGG | 0.556012 | 1.3:-71741637 | MS.gene91415:CDS |
| AAGAAGAGTTACTGTCGCCA+TGG | 0.560843 | 1.3:-71743743 | MS.gene91415:CDS |
| AACGTTGTCAATGATGGAAG+CGG | 0.563328 | 1.3:+71746752 | None:intergenic |
| AAAGACCTACCTTCCCGATA+CGG | 0.564821 | 1.3:+71746105 | None:intergenic |
| GGTGGCTATGATTGTATAGT+CGG | 0.570409 | 1.3:-71743164 | MS.gene91415:CDS |
| ATACTCAACCCAGCATTGCT+CGG | 0.573303 | 1.3:+71741629 | None:intergenic |
| CAAATGGTGTGGAGCATCAA+GGG | 0.574406 | 1.3:+71746146 | None:intergenic |
| ATTGTTCGACTCCCCTGATG+TGG | 0.576891 | 1.3:+71741834 | None:intergenic |
| ACGTTGTCAATGATGGAAGC+GGG | 0.580301 | 1.3:+71746753 | None:intergenic |
| AGAAGAGTTACTGTCGCCAT+GGG | 0.580848 | 1.3:-71743742 | MS.gene91415:CDS |
| GAGGTGTCTCAAGATACTGC+AGG | 0.581605 | 1.3:+71746335 | None:intergenic |
| GGGAACAGCTATGCTGACAG+TGG | 0.586260 | 1.3:+71746773 | None:intergenic |
| GAAGAAGCAGCGGCTGACAA+CGG | 0.589419 | 1.3:-71746904 | MS.gene91415:CDS |
| CGAGTAGCGAGTTCAAGAGT+TGG | 0.592023 | 1.3:+71746729 | None:intergenic |
| TGGTTTGGAAGAGAGTATTG+AGG | 0.599758 | 1.3:-71742369 | MS.gene91415:CDS |
| AGATAAAGGTTATTCCGCAC+CGG | 0.600115 | 1.3:-71746401 | MS.gene91415:CDS |
| TGTCTCATCATCCAAGCCTA+GGG | 0.600351 | 1.3:-71743382 | MS.gene91415:CDS |
| ACCATTTGCGCAAACATGAG+TGG | 0.600994 | 1.3:-71746131 | MS.gene91415:CDS |
| AAACATGAGCACCTGAAGGA+TGG | 0.601594 | 1.3:+71743095 | None:intergenic |
| GACACCTCAGTATTTGAGGA+AGG | 0.603915 | 1.3:-71746320 | MS.gene91415:CDS |
| TTAAATACATGTCCACATCA+GGG | 0.610146 | 1.3:-71741846 | MS.gene91415:CDS |
| ATTTAATGAATGTACATACA+AGG | 0.623297 | 1.3:-71743304 | MS.gene91415:intron |
| TCATGTTTGCGCAAATGGTG+TGG | 0.628666 | 1.3:+71746135 | None:intergenic |
| GGAACAGCTATGCTGACAGT+GGG | 0.628924 | 1.3:+71746774 | None:intergenic |
| GATGATGAGACAACCTCGCG+TGG | 0.636166 | 1.3:+71743393 | None:intergenic |
| CAAACCAGCCAATCCGCCAA+AGG | 0.636167 | 1.3:+71742385 | None:intergenic |
| TCATCTAGATTTACCACGCG+AGG | 0.636923 | 1.3:-71743406 | MS.gene91415:intron |
| TAAATACATGTCCACATCAG+GGG | 0.639657 | 1.3:-71741845 | MS.gene91415:CDS |
| AAATGGTGTGGAGCATCAAG+GGG | 0.640817 | 1.3:+71746147 | None:intergenic |
| AGGGAAGAAGGAGCATATTG+GGG | 0.647186 | 1.3:-71743363 | MS.gene91415:CDS |
| ATCATCCGAATTATCCGGTG+CGG | 0.653728 | 1.3:+71746387 | None:intergenic |
| GAGTGGGGTCCGTATCGGGA+AGG | 0.653942 | 1.3:-71746114 | MS.gene91415:intron |
| ATAGTCGGTACCTCTGAGCA+TGG | 0.660543 | 1.3:-71743149 | MS.gene91415:CDS |
| TGGTGTGGAGCATCAAGGGG+TGG | 0.663049 | 1.3:+71746150 | None:intergenic |
| TGGGGAAGAAGAAGAAGCAG+CGG | 0.683363 | 1.3:-71746914 | MS.gene91415:CDS |
| TAAGAAGAACAAATCAAACA+AGG | 0.684805 | 1.3:-71746802 | MS.gene91415:CDS |
| AGAGCCTTCCTCAAATACTG+AGG | 0.688667 | 1.3:+71746316 | None:intergenic |
| GAGTCGAACAATTCGAACAG+AGG | 0.692468 | 1.3:-71741823 | MS.gene91415:intron |
| GTTGACCAAATACTTGAACC+CGG | 0.705221 | 1.3:-71743766 | MS.gene91415:CDS |
| ATTGATTCGGAAAATAGTCG+CGG | 0.716272 | 1.3:+71746568 | None:intergenic |
| AATAATCTGACCATGCTCAG+AGG | 0.716636 | 1.3:+71743139 | None:intergenic |
| AGAAAGACATTCAAACTCCG+GGG | 0.724344 | 1.3:-71744743 | MS.gene91415:CDS |
| CATTTGCGCAAACATGAGTG+GGG | 0.732835 | 1.3:-71746129 | MS.gene91415:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAAAAAAAGTAAAAAAT+TGG | + | chr1.3:71743892-71743911 | None:intergenic | 10.0% |
| !! | AAATACAAAGAGAATTTAAA+GGG | + | chr1.3:71743915-71743934 | None:intergenic | 15.0% |
| !! | AATAAAAGTAATACAGATAA+AGG | - | chr1.3:71742133-71742152 | MS.gene91415:intron | 15.0% |
| !! | ATTATTATTGTTAAATTGCT+TGG | - | chr1.3:71745497-71745516 | MS.gene91415:intron | 15.0% |
| !! | CAAATTAAAATCAAAGAAAA+GGG | + | chr1.3:71744124-71744143 | None:intergenic | 15.0% |
| !! | TAATAATGTTACTATTAACT+AGG | - | chr1.3:71744704-71744723 | MS.gene91415:intron | 15.0% |
| !! | TCAAATTAAAATCAAAGAAA+AGG | + | chr1.3:71744125-71744144 | None:intergenic | 15.0% |
| !! | TTATTATTGTTAAATTGCTT+GGG | - | chr1.3:71745498-71745517 | MS.gene91415:intron | 15.0% |
| !!! | AATGAAAGTAATTTTGAAAT+GGG | + | chr1.3:71741849-71741868 | None:intergenic | 15.0% |
| !!! | AGCAATTTTTTTTTTAAACT+CGG | + | chr1.3:71744602-71744621 | None:intergenic | 15.0% |
| !!! | TAAAATTAACGTTTTTGTTA+TGG | + | chr1.3:71741873-71741892 | None:intergenic | 15.0% |
| !!! | TAATTTATAATTTTATGCTC+AGG | - | chr1.3:71742609-71742628 | MS.gene91415:intron | 15.0% |
| !!! | TATATTCTATTTTTCTTGTT+AGG | - | chr1.3:71742763-71742782 | MS.gene91415:intron | 15.0% |
| !!! | TTTCATATTTTAAATTTAGC+CGG | + | chr1.3:71746048-71746067 | None:intergenic | 15.0% |
| !! | AAAAATGTAAAGGAAATTCA+TGG | - | chr1.3:71742502-71742521 | MS.gene91415:intron | 20.0% |
| !! | AAAATTTATATTTAGCACCA+TGG | + | chr1.3:71746613-71746632 | None:intergenic | 20.0% |
| !! | AAAGAAAACTTCAAAATCAT+AGG | + | chr1.3:71745000-71745019 | None:intergenic | 20.0% |
| !! | AACATTATTAGAACAAAATC+TGG | + | chr1.3:71744694-71744713 | None:intergenic | 20.0% |
| !! | ATAGATTAATAGGAAAACAA+TGG | + | chr1.3:71745603-71745622 | None:intergenic | 20.0% |
| !! | ATATATTTCAAAACTTTCCA+TGG | + | chr1.3:71742803-71742822 | None:intergenic | 20.0% |
| !! | ATATTAGAATATTCTTGAAC+AGG | - | chr1.3:71744350-71744369 | MS.gene91415:intron | 20.0% |
| !! | ATCTATATCACAATATAACA+AGG | + | chr1.3:71742685-71742704 | None:intergenic | 20.0% |
| !! | ATTTAATGAATGTACATACA+AGG | - | chr1.3:71745244-71745263 | MS.gene91415:intron | 20.0% |
| !! | ATTTATAGATTATTAGAGTG+TGG | - | chr1.3:71744173-71744192 | MS.gene91415:intron | 20.0% |
| !! | CATTATATATGTGATTATTG+CGG | - | chr1.3:71746233-71746252 | MS.gene91415:intron | 20.0% |
| !! | CGAAAAGAAAATAGATTAAT+AGG | + | chr1.3:71745613-71745632 | None:intergenic | 20.0% |
| !! | GAAATACAAAGAGAATTTAA+AGG | + | chr1.3:71743916-71743935 | None:intergenic | 20.0% |
| !! | GAGTTTAAAAAAAAAATTGC+TGG | - | chr1.3:71744601-71744620 | MS.gene91415:intron | 20.0% |
| !! | TCTATATCACAATATAACAA+GGG | + | chr1.3:71742684-71742703 | None:intergenic | 20.0% |
| !! | TGAACAAGTTTATTAATTCT+GGG | - | chr1.3:71745559-71745578 | MS.gene91415:intron | 20.0% |
| !! | TTATTTATGTGTGTATGAAT+AGG | - | chr1.3:71742096-71742115 | MS.gene91415:intron | 20.0% |
| !!! | AAATCTGGAATAAATTCATT+TGG | - | chr1.3:71743237-71743256 | MS.gene91415:intron | 20.0% |
| !!! | ATGATTTTGAAGTTTTCTTT+TGG | - | chr1.3:71745000-71745019 | MS.gene91415:intron | 20.0% |
| !!! | ATGGAAAGTTTTGAAATATA+TGG | - | chr1.3:71742802-71742821 | MS.gene91415:intron | 20.0% |
| !!! | CAATGAAAGTAATTTTGAAA+TGG | + | chr1.3:71741850-71741869 | None:intergenic | 20.0% |
| !!! | GAGGATTCATTTTTTTTTTA+GGG | + | chr1.3:71746838-71746857 | None:intergenic | 20.0% |
| !!! | TGAGGATTCATTTTTTTTTT+AGG | + | chr1.3:71746839-71746858 | None:intergenic | 20.0% |
| !!! | TGATTTTGAAGTTTTCTTTT+GGG | - | chr1.3:71745001-71745020 | MS.gene91415:intron | 20.0% |
| !!! | TTTTTTAGGGAAAAAATATG+AGG | + | chr1.3:71746825-71746844 | None:intergenic | 20.0% |
| ! | AAAAAATGCCAAATTGAAAG+AGG | + | chr1.3:71744944-71744963 | None:intergenic | 25.0% |
| ! | AAATGAGTTTATGGAAACTT+TGG | - | chr1.3:71743446-71743465 | MS.gene91415:intron | 25.0% |
| ! | AAATTATCAGTACCAATCAT+TGG | + | chr1.3:71742595-71742614 | None:intergenic | 25.0% |
| ! | AAATTCATTTGGTTGAAAGT+TGG | - | chr1.3:71743248-71743267 | MS.gene91415:intron | 25.0% |
| ! | AAATTTATGGAATCTCTGAT+TGG | + | chr1.3:71746274-71746293 | None:intergenic | 25.0% |
| ! | AACAGTAAATGAAACTATAG+TGG | - | chr1.3:71744397-71744416 | MS.gene91415:intron | 25.0% |
| ! | AAGGAAAATGTAAGAGAAAT+AGG | + | chr1.3:71744101-71744120 | None:intergenic | 25.0% |
| ! | AATAAATTAATCATCGCAAC+TGG | + | chr1.3:71743484-71743503 | None:intergenic | 25.0% |
| ! | AATAGGCTATGGATATTAAA+AGG | + | chr1.3:71745301-71745320 | None:intergenic | 25.0% |
| ! | ACATGAGATTAAAGTTATCA+GGG | - | chr1.3:71745719-71745738 | MS.gene91415:intron | 25.0% |
| ! | AGAAAGGAAAAAGATTAAAC+CGG | + | chr1.3:71743592-71743611 | None:intergenic | 25.0% |
| ! | AGAATATACGAAAACAATAC+TGG | + | chr1.3:71742751-71742770 | None:intergenic | 25.0% |
| ! | AGAATTTCTAATTTCTGTAG+TGG | - | chr1.3:71742476-71742495 | MS.gene91415:intron | 25.0% |
| ! | ATAAAACTACAATGCTATAG+AGG | - | chr1.3:71742940-71742959 | MS.gene91415:intron | 25.0% |
| ! | ATACATTTCACAAGATTTCT+TGG | - | chr1.3:71743865-71743884 | MS.gene91415:intron | 25.0% |
| ! | ATATTGTCATTGTGTTATCA+AGG | + | chr1.3:71745029-71745048 | None:intergenic | 25.0% |
| ! | ATCAGTTGCATTATAATGTT+TGG | + | chr1.3:71745959-71745978 | None:intergenic | 25.0% |
| ! | ATGATAGGAAAAACAATTGT+GGG | + | chr1.3:71745849-71745868 | None:intergenic | 25.0% |
| ! | ATTCAGCTTAAGAAAAAGAA+AGG | - | chr1.3:71746586-71746605 | MS.gene91415:CDS | 25.0% |
| ! | CATAAATTTGACAGAATCAT+CGG | - | chr1.3:71746285-71746304 | MS.gene91415:CDS | 25.0% |
| ! | CATGTAAAAGATATGAAATC+TGG | - | chr1.3:71743222-71743241 | MS.gene91415:intron | 25.0% |
| ! | CATTGCAATAATAACTTCTT+AGG | - | chr1.3:71743770-71743789 | MS.gene91415:CDS | 25.0% |
| ! | CGCAATAATCACATATATAA+TGG | + | chr1.3:71746235-71746254 | None:intergenic | 25.0% |
| ! | CTATATCACAATATAACAAG+GGG | + | chr1.3:71742683-71742702 | None:intergenic | 25.0% |
| ! | GGAAGAATGATTTAAATTCT+GGG | - | chr1.3:71742523-71742542 | MS.gene91415:intron | 25.0% |
| ! | GTGAACAAGTTTATTAATTC+TGG | - | chr1.3:71745558-71745577 | MS.gene91415:intron | 25.0% |
| ! | GTTTAGTATGTGTTTAATGT+TGG | - | chr1.3:71742344-71742363 | MS.gene91415:intron | 25.0% |
| ! | TAAGAAGAACAAATCAAACA+AGG | - | chr1.3:71741746-71741765 | MS.gene91415:intron | 25.0% |
| ! | TACATTTCACAAGATTTCTT+GGG | - | chr1.3:71743866-71743885 | MS.gene91415:intron | 25.0% |
| ! | TATGATAGGAAAAACAATTG+TGG | + | chr1.3:71745850-71745869 | None:intergenic | 25.0% |
| ! | TCCTATAAAAGAAAAACATG+AGG | + | chr1.3:71746857-71746876 | None:intergenic | 25.0% |
| ! | TGACAAGTAAACAAAAGAAA+GGG | + | chr1.3:71745355-71745374 | None:intergenic | 25.0% |
| ! | TGGAAGAATGATTTAAATTC+TGG | - | chr1.3:71742522-71742541 | MS.gene91415:intron | 25.0% |
| ! | TTAAAATCAAAGAAAAGGGA+AGG | + | chr1.3:71744120-71744139 | None:intergenic | 25.0% |
| ! | TTGACAAGTAAACAAAAGAA+AGG | + | chr1.3:71745356-71745375 | None:intergenic | 25.0% |
| !! | AAATATATATGTGATGATGC+AGG | - | chr1.3:71746075-71746094 | MS.gene91415:intron | 25.0% |
| !! | AATTTTCATGTCAGTTTGAT+AGG | + | chr1.3:71742915-71742934 | None:intergenic | 25.0% |
| !! | TCATGTTTTTCTTTTATAGG+AGG | - | chr1.3:71746856-71746875 | MS.gene91415:CDS | 25.0% |
| !! | TCCTCATGTTTTTCTTTTAT+AGG | - | chr1.3:71746853-71746872 | MS.gene91415:CDS | 25.0% |
| !! | TTAATGTTGGTTGTTTGTAT+TGG | - | chr1.3:71742357-71742376 | MS.gene91415:CDS | 25.0% |
| !!! | ATGGAAAGAAGTTATTTTGA+AGG | - | chr1.3:71743370-71743389 | MS.gene91415:CDS | 25.0% |
| !!! | GCAGGTGTTTTTATTTAAAT+TGG | - | chr1.3:71746093-71746112 | MS.gene91415:intron | 25.0% |
| !!! | TCTATAGCATTGTAGTTTTA+TGG | + | chr1.3:71742941-71742960 | None:intergenic | 25.0% |
| !!! | TGGAAAGAAGTTATTTTGAA+GGG | - | chr1.3:71743371-71743390 | MS.gene91415:CDS | 25.0% |
| !!! | TTCATTGTGTTGGTTATTTA+AGG | - | chr1.3:71743626-71743645 | MS.gene91415:intron | 25.0% |
| !!! | TTTTTTTTAAACTCGGTATC+TGG | + | chr1.3:71744595-71744614 | None:intergenic | 25.0% |
| AAAGAAAGACATTCAAACTC+CGG | - | chr1.3:71743803-71743822 | MS.gene91415:intron | 30.0% | |
| AAGGGAAACGAAAAAGAAAA+AGG | + | chr1.3:71743938-71743957 | None:intergenic | 30.0% | |
| AATAGTAGCATATAGAAAGC+GGG | - | chr1.3:71744648-71744667 | MS.gene91415:intron | 30.0% | |
| AATCTTAAGCTGTTATGCAT+TGG | + | chr1.3:71742262-71742281 | None:intergenic | 30.0% | |
| AATGAACAGTGTTATCGAAT+CGG | - | chr1.3:71742972-71742991 | MS.gene91415:intron | 30.0% | |
| AATTCTGAATAGTGTAGGTT+TGG | + | chr1.3:71746398-71746417 | None:intergenic | 30.0% | |
| ACTAGAAAGCAGAAATTCTT+GGG | - | chr1.3:71744437-71744456 | MS.gene91415:intron | 30.0% | |
| ACTATGCAACTGAATAACTA+TGG | - | chr1.3:71744292-71744311 | MS.gene91415:intron | 30.0% | |
| ACTTCTCCTATAGTATTCTT+AGG | + | chr1.3:71743404-71743423 | None:intergenic | 30.0% | |
| ACTTGAATTCTGAATAGTGT+AGG | + | chr1.3:71746403-71746422 | None:intergenic | 30.0% | |
| AGAATATTCTTGAACAGGTT+AGG | - | chr1.3:71744355-71744374 | MS.gene91415:intron | 30.0% | |
| AGGTTGTCATTGAAAAAACA+AGG | + | chr1.3:71743957-71743976 | None:intergenic | 30.0% | |
| ATAATAAGATGTCCTTGAGA+AGG | + | chr1.3:71743977-71743996 | None:intergenic | 30.0% | |
| ATTTGGTTGAAAGTTGGAAT+CGG | - | chr1.3:71743254-71743273 | MS.gene91415:intron | 30.0% | |
| CAATAGTAGCATATAGAAAG+CGG | - | chr1.3:71744647-71744666 | MS.gene91415:intron | 30.0% | |
| CAATGTGTGGTTCAAATTAA+CGG | + | chr1.3:71742856-71742875 | None:intergenic | 30.0% | |
| CACATGAGATTAAAGTTATC+AGG | - | chr1.3:71745718-71745737 | MS.gene91415:intron | 30.0% | |
| CATGAGATTAAAGTTATCAG+GGG | - | chr1.3:71745720-71745739 | MS.gene91415:intron | 30.0% | |
| CCATAAACTCATTTAGAGAA+AGG | + | chr1.3:71743440-71743459 | None:intergenic | 30.0% | |
| CCTTTCTCTAAATGAGTTTA+TGG | - | chr1.3:71743437-71743456 | MS.gene91415:intron | 30.0% | |
| CGATGATTCTGTCAAATTTA+TGG | + | chr1.3:71746287-71746306 | None:intergenic | 30.0% | |
| CTTAATAACGAAATCATGAC+TGG | - | chr1.3:71743286-71743305 | MS.gene91415:intron | 30.0% | |
| GAAAGGAAAAAGATTAAACC+GGG | + | chr1.3:71743591-71743610 | None:intergenic | 30.0% | |
| GATATAGATCTAATCGATGA+TGG | - | chr1.3:71742696-71742715 | MS.gene91415:intron | 30.0% | |
| GATTACCATAATCCAAATTG+CGG | + | chr1.3:71744838-71744857 | None:intergenic | 30.0% | |
| GGAAAACCTAAGAATACTAT+AGG | - | chr1.3:71743395-71743414 | MS.gene91415:CDS | 30.0% | |
| GGTGAGAAAATCAAATCAAA+TGG | - | chr1.3:71743351-71743370 | MS.gene91415:CDS | 30.0% | |
| GGTTGTCATTGAAAAAACAA+GGG | + | chr1.3:71743956-71743975 | None:intergenic | 30.0% | |
| GTATAGTGAATCAGATCATA+TGG | + | chr1.3:71744743-71744762 | None:intergenic | 30.0% | |
| TACTAGAAAGCAGAAATTCT+TGG | - | chr1.3:71744436-71744455 | MS.gene91415:intron | 30.0% | |
| TATAATGCAACTGATGCATA+GGG | - | chr1.3:71745964-71745983 | MS.gene91415:intron | 30.0% | |
| TATTGCAATGTATCAAAACC+TGG | + | chr1.3:71743760-71743779 | None:intergenic | 30.0% | |
| TGAAAACATGTGTCTTTCTA+AGG | - | chr1.3:71746521-71746540 | MS.gene91415:intron | 30.0% | |
| TGAATATTGATGCCAAACTA+CGG | - | chr1.3:71745676-71745695 | MS.gene91415:intron | 30.0% | |
| TGAGGAAGATGATAACTTTA+AGG | - | chr1.3:71746197-71746216 | MS.gene91415:intron | 30.0% | |
| TGTTTGTATTGGAATTTGCA+GGG | - | chr1.3:71742368-71742387 | MS.gene91415:CDS | 30.0% | |
| TTAAATACATGTCCACATCA+GGG | - | chr1.3:71746702-71746721 | MS.gene91415:intron | 30.0% | |
| TTAAGAAAAAGAAAGGACCA+TGG | - | chr1.3:71746593-71746612 | MS.gene91415:CDS | 30.0% | |
| TTAATCTCATGTGAACTCTT+GGG | + | chr1.3:71745711-71745730 | None:intergenic | 30.0% | |
| TTATAATGCAACTGATGCAT+AGG | - | chr1.3:71745963-71745982 | MS.gene91415:intron | 30.0% | |
| TTGTTTGTATTGGAATTTGC+AGG | - | chr1.3:71742367-71742386 | MS.gene91415:CDS | 30.0% | |
| TTTAAATACATGTCCACATC+AGG | - | chr1.3:71746701-71746720 | MS.gene91415:intron | 30.0% | |
| TTTAACTGGAAGTTCAATGA+GGG | - | chr1.3:71744050-71744069 | MS.gene91415:intron | 30.0% | |
| TTTAATCTCATGTGAACTCT+TGG | + | chr1.3:71745712-71745731 | None:intergenic | 30.0% | |
| TTTATGTGTGTATGAATAGG+TGG | - | chr1.3:71742099-71742118 | MS.gene91415:intron | 30.0% | |
| ! | AGACATTTATTGATTGCCTT+TGG | - | chr1.3:71746147-71746166 | MS.gene91415:CDS | 30.0% |
| ! | AGTTTATTAATTCTGGGAGA+TGG | - | chr1.3:71745565-71745584 | MS.gene91415:intron | 30.0% |
| !! | AACTTTGCTCTAGCTTTAAA+TGG | - | chr1.3:71744515-71744534 | MS.gene91415:intron | 30.0% |
| !! | ACTTTGCTCTAGCTTTAAAT+GGG | - | chr1.3:71744516-71744535 | MS.gene91415:intron | 30.0% |
| !! | AGCATGCTTTTCTTTTTCAT+TGG | - | chr1.3:71744906-71744925 | MS.gene91415:intron | 30.0% |
| !! | AGTTGATGTTGGCTTATTTA+AGG | - | chr1.3:71743835-71743854 | MS.gene91415:intron | 30.0% |
| !! | GTAGTGGATGAAAAATGTAA+AGG | - | chr1.3:71742492-71742511 | MS.gene91415:intron | 30.0% |
| !! | TTTTAACTGGAAGTTCAATG+AGG | - | chr1.3:71744049-71744068 | MS.gene91415:intron | 30.0% |
| !! | TTTTCCCTGCATTTTTTAGA+GGG | + | chr1.3:71746655-71746674 | None:intergenic | 30.0% |
| !! | TTTTTCCCTGCATTTTTTAG+AGG | + | chr1.3:71746656-71746675 | None:intergenic | 30.0% |
| !!! | AAAGAAGTTATTTTGAAGGG+AGG | - | chr1.3:71743374-71743393 | MS.gene91415:CDS | 30.0% |
| !!! | GTATTTTGAGTTTCACTTAC+CGG | - | chr1.3:71746026-71746045 | MS.gene91415:intron | 30.0% |
| !!! | TTTGGATATTGGCTTTTAAC+TGG | - | chr1.3:71744036-71744055 | MS.gene91415:intron | 30.0% |
| AACAGCTTAAGATTTGTGGT+TGG | - | chr1.3:71742268-71742287 | MS.gene91415:intron | 35.0% | |
| AAGAAAATGAGGAGGGAAAA+GGG | + | chr1.3:71745913-71745932 | None:intergenic | 35.0% | |
| AAGAAAGACATTCAAACTCC+GGG | - | chr1.3:71743804-71743823 | MS.gene91415:intron | 35.0% | |
| AATGCAGGGAAAAAATGCAA+AGG | - | chr1.3:71746662-71746681 | MS.gene91415:intron | 35.0% | |
| AGCATAAATTCATGTAGCCA+AGG | + | chr1.3:71745104-71745123 | None:intergenic | 35.0% | |
| AGTACATGATATTGAGCCAT+TGG | + | chr1.3:71745746-71745765 | None:intergenic | 35.0% | |
| ATACGCTTCCTCTTTCAATT+TGG | - | chr1.3:71744933-71744952 | MS.gene91415:intron | 35.0% | |
| ATTGCTGGAAACAGAAATTC+AGG | - | chr1.3:71744616-71744635 | MS.gene91415:intron | 35.0% | |
| ATTGGCAAATGTTTAGCTGA+TGG | + | chr1.3:71742577-71742596 | None:intergenic | 35.0% | |
| CCAATATCCAAACAACTACA+TGG | + | chr1.3:71744028-71744047 | None:intergenic | 35.0% | |
| CCATGTAGTTGTTTGGATAT+TGG | - | chr1.3:71744025-71744044 | MS.gene91415:intron | 35.0% | |
| CTTTCATCATCCGAATTATC+CGG | + | chr1.3:71742169-71742188 | None:intergenic | 35.0% | |
| GCATAACAGCTTAAGATTTG+TGG | - | chr1.3:71742264-71742283 | MS.gene91415:intron | 35.0% | |
| GCTAAACATTTGCCAATGAT+TGG | - | chr1.3:71742580-71742599 | MS.gene91415:intron | 35.0% | |
| GTGTTACACATTTCTGTGTA+AGG | - | chr1.3:71746421-71746440 | MS.gene91415:CDS | 35.0% | |
| GTTAGCAAGCTCATTATGAT+AGG | + | chr1.3:71745864-71745883 | None:intergenic | 35.0% | |
| GTTTACTTGTCAACGTTACA+GGG | - | chr1.3:71745363-71745382 | MS.gene91415:intron | 35.0% | |
| GTTTGTATTGGAATTTGCAG+GGG | - | chr1.3:71742369-71742388 | MS.gene91415:CDS | 35.0% | |
| TAAATACATGTCCACATCAG+GGG | - | chr1.3:71746703-71746722 | MS.gene91415:intron | 35.0% | |
| TAACCAACACAATGAACACT+TGG | + | chr1.3:71743622-71743641 | None:intergenic | 35.0% | |
| TACAGTGGTCGATGAATAAT+AGG | + | chr1.3:71745318-71745337 | None:intergenic | 35.0% | |
| TCTCATACGAAAACATGTCT+TGG | - | chr1.3:71746486-71746505 | MS.gene91415:intron | 35.0% | |
| TGAATAGTGTAGGTTTGGAT+TGG | + | chr1.3:71746393-71746412 | None:intergenic | 35.0% | |
| TGAGAACAGAAAATTCACAC+TGG | + | chr1.3:71745800-71745819 | None:intergenic | 35.0% | |
| TGTTTACTTGTCAACGTTAC+AGG | - | chr1.3:71745362-71745381 | MS.gene91415:intron | 35.0% | |
| TTCATTAGCACTGTTGTCTA+TGG | + | chr1.3:71743151-71743170 | None:intergenic | 35.0% | |
| TTCATTCCAGAATTTCTCCT+TGG | - | chr1.3:71745084-71745103 | MS.gene91415:intron | 35.0% | |
| TTCGGATGATGAAAGTAGTT+CGG | - | chr1.3:71742174-71742193 | MS.gene91415:intron | 35.0% | |
| TTGGCAAATGTTTAGCTGAT+GGG | + | chr1.3:71742576-71742595 | None:intergenic | 35.0% | |
| TTTAAGCGTTCTCTCTACAT+TGG | - | chr1.3:71745528-71745547 | MS.gene91415:intron | 35.0% | |
| TTTCAATGACAACCTTCTCA+AGG | - | chr1.3:71743962-71743981 | MS.gene91415:intron | 35.0% | |
| ! | AATCACCCTCTAAAAAATGC+AGG | - | chr1.3:71746647-71746666 | MS.gene91415:intron | 35.0% |
| ! | ATCACCCTCTAAAAAATGCA+GGG | - | chr1.3:71746648-71746667 | MS.gene91415:intron | 35.0% |
| ! | ATGAGTGGAAAGTATAGCAT+TGG | - | chr1.3:71745821-71745840 | MS.gene91415:intron | 35.0% |
| ! | ATGTTGCCATTTATTGGGTT+TGG | + | chr1.3:71741690-71741709 | None:intergenic | 35.0% |
| ! | ATTTTCTGTTCTCACATGAG+TGG | - | chr1.3:71745806-71745825 | MS.gene91415:intron | 35.0% |
| ! | CATCGATGTTGCCATTTATT+GGG | + | chr1.3:71741695-71741714 | None:intergenic | 35.0% |
| ! | CATTAGCAACCTCATTGATT+CGG | + | chr1.3:71741996-71742015 | None:intergenic | 35.0% |
| ! | CATTTATTGATTGCCTTTGG+CGG | - | chr1.3:71746150-71746169 | MS.gene91415:CDS | 35.0% |
| ! | GACTATTTTCCGAATCAATG+AGG | - | chr1.3:71741984-71742003 | MS.gene91415:intron | 35.0% |
| ! | TCATCGATGTTGCCATTTAT+TGG | + | chr1.3:71741696-71741715 | None:intergenic | 35.0% |
| ! | TGAGTGGAAAGTATAGCATT+GGG | - | chr1.3:71745822-71745841 | MS.gene91415:intron | 35.0% |
| !! | AACACTTGGTGTGTTAAGAA+AGG | + | chr1.3:71743608-71743627 | None:intergenic | 35.0% |
| !! | ATTGATTCGGAAAATAGTCG+CGG | + | chr1.3:71741983-71742002 | None:intergenic | 35.0% |
| !!! | AATCGGTGGCAGTTTTTTTT+TGG | - | chr1.3:71743005-71743024 | MS.gene91415:intron | 35.0% |
| !!! | ATCGGTGGCAGTTTTTTTTT+GGG | - | chr1.3:71743006-71743025 | MS.gene91415:intron | 35.0% |
| !!! | GTTGTCGACTTTTATTGTGT+TGG | - | chr1.3:71743547-71743566 | MS.gene91415:intron | 35.0% |
| !!! | TTTTGATTTCCCTTTTCAGC+TGG | - | chr1.3:71741939-71741958 | MS.gene91415:intron | 35.0% |
| AAAAGAAAGGGTTCGTGAGT+AGG | + | chr1.3:71745343-71745362 | None:intergenic | 40.0% | |
| AACGGACATTAAACACTCCA+TGG | + | chr1.3:71742838-71742857 | None:intergenic | 40.0% | |
| AATAATCTGACCATGCTCAG+AGG | + | chr1.3:71745412-71745431 | None:intergenic | 40.0% | |
| ACACCAAGTGTTCATTGTGT+TGG | - | chr1.3:71743616-71743635 | MS.gene91415:intron | 40.0% | |
| ACCATAATCCAAATTGCGGT+TGG | + | chr1.3:71744834-71744853 | None:intergenic | 40.0% | |
| AGAAAATGAGGAGGGAAAAG+GGG | + | chr1.3:71745912-71745931 | None:intergenic | 40.0% | |
| AGAAAGACATTCAAACTCCG+GGG | - | chr1.3:71743805-71743824 | MS.gene91415:intron | 40.0% | |
| AGATAAAGGTTATTCCGCAC+CGG | - | chr1.3:71742147-71742166 | MS.gene91415:intron | 40.0% | |
| AGCTAGAGCAAAGTTCCATA+TGG | + | chr1.3:71744510-71744529 | None:intergenic | 40.0% | |
| AGCTTGAAATACCATCCTTC+AGG | - | chr1.3:71745442-71745461 | MS.gene91415:intron | 40.0% | |
| AGGAAAAAGATTAAACCGGG+TGG | + | chr1.3:71743588-71743607 | None:intergenic | 40.0% | |
| AGTTGGAACGTTGTCAATGA+TGG | + | chr1.3:71741805-71741824 | None:intergenic | 40.0% | |
| ATCTGTGTGTGTTGGAAGTA+AGG | - | chr1.3:71743324-71743343 | MS.gene91415:CDS | 40.0% | |
| ATGTAGCCAAGGAGAAATTC+TGG | + | chr1.3:71745093-71745112 | None:intergenic | 40.0% | |
| ATTAGCACTGTTGTCTATGG+CGG | + | chr1.3:71743148-71743167 | None:intergenic | 40.0% | |
| CCTGAACCAAACCCAATAAA+TGG | - | chr1.3:71741681-71741700 | MS.gene91415:intron | 40.0% | |
| CTAAGCTTATCTGTGTGTGT+TGG | - | chr1.3:71743316-71743335 | MS.gene91415:CDS | 40.0% | |
| GAACAGAAAATTCACACTGG+AGG | + | chr1.3:71745797-71745816 | None:intergenic | 40.0% | |
| GAATGTGTTGCAACAGAGAA+AGG | + | chr1.3:71746318-71746337 | None:intergenic | 40.0% | |
| GAATGTTCAACAGTGAGTGT+AGG | - | chr1.3:71743168-71743187 | MS.gene91415:intron | 40.0% | |
| GGTCGATGAATAATAGGCTA+TGG | + | chr1.3:71745312-71745331 | None:intergenic | 40.0% | |
| GGTGGCTATGATTGTATAGT+CGG | - | chr1.3:71745384-71745403 | MS.gene91415:intron | 40.0% | |
| GGTTCATAGATCGACTAATC+CGG | + | chr1.3:71744574-71744593 | None:intergenic | 40.0% | |
| GTTAAAACATGAGCACCTGA+AGG | + | chr1.3:71745460-71745479 | None:intergenic | 40.0% | |
| GTTGACCAAATACTTGAACC+CGG | - | chr1.3:71744782-71744801 | MS.gene91415:intron | 40.0% | |
| TGGCAAATGTTTAGCTGATG+GGG | + | chr1.3:71742575-71742594 | None:intergenic | 40.0% | |
| TTAAAGTTATCAGGGGCCAA+TGG | - | chr1.3:71745727-71745746 | MS.gene91415:intron | 40.0% | |
| TTATTCCGCACCGGATAATT+CGG | - | chr1.3:71742156-71742175 | MS.gene91415:intron | 40.0% | |
| TTCTTCCGGGTTCAAGTATT+TGG | + | chr1.3:71744790-71744809 | None:intergenic | 40.0% | |
| TTGAGACACCTCAGTATTTG+AGG | - | chr1.3:71742224-71742243 | MS.gene91415:intron | 40.0% | |
| ! | AACGTTGTCAATGATGGAAG+CGG | + | chr1.3:71741799-71741818 | None:intergenic | 40.0% |
| ! | ATTTGACTAGCCAGCTGAAA+AGG | + | chr1.3:71741952-71741971 | None:intergenic | 40.0% |
| ! | CCATTTATTGGGTTTGGTTC+AGG | + | chr1.3:71741684-71741703 | None:intergenic | 40.0% |
| ! | TAGGGAAGAAGGAGCATATT+GGG | - | chr1.3:71745184-71745203 | MS.gene91415:intron | 40.0% |
| ! | TATTAGTCACCCCAGCTTTT+GGG | - | chr1.3:71743500-71743519 | MS.gene91415:intron | 40.0% |
| ! | TATTGGGTTTGGTTCAGGTT+CGG | + | chr1.3:71741679-71741698 | None:intergenic | 40.0% |
| ! | TTATTAGTCACCCCAGCTTT+TGG | - | chr1.3:71743499-71743518 | MS.gene91415:intron | 40.0% |
| ! | TTTGACTAGCCAGCTGAAAA+GGG | + | chr1.3:71741951-71741970 | None:intergenic | 40.0% |
| !! | ATGAGCTTGCTAACAAGCAA+AGG | - | chr1.3:71745870-71745889 | MS.gene91415:intron | 40.0% |
| !! | TGGTTTGGAAGAGAGTATTG+AGG | - | chr1.3:71746179-71746198 | MS.gene91415:intron | 40.0% |
| !!! | ACTTTTGTTGTTTTGCCCCA+TGG | - | chr1.3:71743727-71743746 | MS.gene91415:CDS | 40.0% |
| AAACATGAGCACCTGAAGGA+TGG | + | chr1.3:71745456-71745475 | None:intergenic | 45.0% | |
| AAAGACCTACCTTCCCGATA+CGG | + | chr1.3:71742446-71742465 | None:intergenic | 45.0% | |
| AACTACATGGCAGAGACGAA+CGG | + | chr1.3:71744015-71744034 | None:intergenic | 45.0% | |
| AACTCTTGAACTCGCTACTC+GGG | - | chr1.3:71741821-71741840 | MS.gene91415:intron | 45.0% | |
| AAGAAGAGTTACTGTCGCCA+TGG | - | chr1.3:71744805-71744824 | MS.gene91415:intron | 45.0% | |
| AAGCATTACCCCAAAAGCTG+GGG | + | chr1.3:71743512-71743531 | None:intergenic | 45.0% | |
| ACAGTGCATGTGCATCAAAC+AGG | + | chr1.3:71746340-71746359 | None:intergenic | 45.0% | |
| ACCATTTGCGCAAACATGAG+TGG | - | chr1.3:71742417-71742436 | MS.gene91415:intron | 45.0% | |
| ACTTCAGAAAATGCAGCTGC+AGG | + | chr1.3:71742303-71742322 | None:intergenic | 45.0% | |
| AGAAGAGTTACTGTCGCCAT+GGG | - | chr1.3:71744806-71744825 | MS.gene91415:intron | 45.0% | |
| AGAGCCTTCCTCAAATACTG+AGG | + | chr1.3:71742235-71742254 | None:intergenic | 45.0% | |
| AGCAGAAATTCTTGGGACCT+TGG | - | chr1.3:71744444-71744463 | MS.gene91415:intron | 45.0% | |
| AGGAGAGTAATCGAAAGCCA+TGG | - | chr1.3:71742783-71742802 | MS.gene91415:intron | 45.0% | |
| ATACCCAATTTCGGCCGATA+TGG | - | chr1.3:71743038-71743057 | MS.gene91415:intron | 45.0% | |
| ATATCGGCCGAAATTGGGTA+TGG | + | chr1.3:71743039-71743058 | None:intergenic | 45.0% | |
| ATCATCCGAATTATCCGGTG+CGG | + | chr1.3:71742164-71742183 | None:intergenic | 45.0% | |
| ATGTATCAAAACCTGGCCAG+TGG | + | chr1.3:71743753-71743772 | None:intergenic | 45.0% | |
| CAACTCTTGAACTCGCTACT+CGG | - | chr1.3:71741820-71741839 | MS.gene91415:intron | 45.0% | |
| CAAGCATTACCCCAAAAGCT+GGG | + | chr1.3:71743513-71743532 | None:intergenic | 45.0% | |
| CAATATGCTCCTTCTTCCCT+AGG | + | chr1.3:71745185-71745204 | None:intergenic | 45.0% | |
| CATTTGCGCAAACATGAGTG+GGG | - | chr1.3:71742419-71742438 | MS.gene91415:intron | 45.0% | |
| CCATTTGCGCAAACATGAGT+GGG | - | chr1.3:71742418-71742437 | MS.gene91415:intron | 45.0% | |
| CTCTCCACCATACCCAATTT+CGG | - | chr1.3:71743029-71743048 | MS.gene91415:intron | 45.0% | |
| CTCTGATTGGCAGTAATCGA+GGG | + | chr1.3:71746261-71746280 | None:intergenic | 45.0% | |
| GACACCTCAGTATTTGAGGA+AGG | - | chr1.3:71742228-71742247 | MS.gene91415:intron | 45.0% | |
| GACAGCAGAATCATTCATGC+AGG | + | chr1.3:71742659-71742678 | None:intergenic | 45.0% | |
| GAGTCGAACAATTCGAACAG+AGG | - | chr1.3:71746725-71746744 | MS.gene91415:intron | 45.0% | |
| GCAGAGACGAACGGAAAATA+TGG | + | chr1.3:71744006-71744025 | None:intergenic | 45.0% | |
| GCCAACCGCAATTTGGATTA+TGG | - | chr1.3:71744830-71744849 | MS.gene91415:intron | 45.0% | |
| GGCAAATGTTTAGCTGATGG+GGG | + | chr1.3:71742574-71742593 | None:intergenic | 45.0% | |
| GTCTCTGCCATGTAGTTGTT+TGG | - | chr1.3:71744018-71744037 | MS.gene91415:intron | 45.0% | |
| GTGTGTTGGAAGTAAGGTTG+TGG | - | chr1.3:71743330-71743349 | MS.gene91415:CDS | 45.0% | |
| GTTCGTGAGTAGGATTACAG+TGG | + | chr1.3:71745333-71745352 | None:intergenic | 45.0% | |
| TACTTGTCAACGTTACAGGG+TGG | - | chr1.3:71745366-71745385 | MS.gene91415:intron | 45.0% | |
| TATATGGTTCGTGCATGCCA+TGG | - | chr1.3:71742818-71742837 | MS.gene91415:intron | 45.0% | |
| TCAAGGTCTCAGGTTCCTAT+GGG | - | chr1.3:71744479-71744498 | MS.gene91415:intron | 45.0% | |
| TCATAGATCGACTAATCCGG+CGG | + | chr1.3:71744571-71744590 | None:intergenic | 45.0% | |
| TCATCTAGATTTACCACGCG+AGG | - | chr1.3:71745142-71745161 | MS.gene91415:intron | 45.0% | |
| TCATGTTTGCGCAAATGGTG+TGG | + | chr1.3:71742416-71742435 | None:intergenic | 45.0% | |
| TCCGCCATAATCCGATATCA+CGG | - | chr1.3:71743069-71743088 | MS.gene91415:intron | 45.0% | |
| TCTCTGATTGGCAGTAATCG+AGG | + | chr1.3:71746262-71746281 | None:intergenic | 45.0% | |
| TGTCTCATCATCCAAGCCTA+GGG | - | chr1.3:71745166-71745185 | MS.gene91415:intron | 45.0% | |
| TTAGCACTGTTGTCTATGGC+GGG | + | chr1.3:71743147-71743166 | None:intergenic | 45.0% | |
| TTGTCTCATCATCCAAGCCT+AGG | - | chr1.3:71745165-71745184 | MS.gene91415:intron | 45.0% | |
| ! | AAAAGGCAGAGAAGTGTGTC+TGG | + | chr1.3:71745284-71745303 | None:intergenic | 45.0% |
| ! | AAAGGCAGAGAAGTGTGTCT+GGG | + | chr1.3:71745283-71745302 | None:intergenic | 45.0% |
| ! | AAATGGTGTGGAGCATCAAG+GGG | + | chr1.3:71742404-71742423 | None:intergenic | 45.0% |
| ! | ACGTTGTCAATGATGGAAGC+GGG | + | chr1.3:71741798-71741817 | None:intergenic | 45.0% |
| ! | AGGGAAGAAGGAGCATATTG+GGG | - | chr1.3:71745185-71745204 | MS.gene91415:intron | 45.0% |
| ! | ATTAGTCACCCCAGCTTTTG+GGG | - | chr1.3:71743501-71743520 | MS.gene91415:intron | 45.0% |
| ! | ATTGATTGCCTTTGGCGGAT+TGG | - | chr1.3:71746155-71746174 | MS.gene91415:CDS | 45.0% |
| ! | CAAATGGTGTGGAGCATCAA+GGG | + | chr1.3:71742405-71742424 | None:intergenic | 45.0% |
| ! | CTAGGGAAGAAGGAGCATAT+TGG | - | chr1.3:71745183-71745202 | MS.gene91415:intron | 45.0% |
| !! | TTAGCTTGCTTGTTTCCACC+CGG | - | chr1.3:71743570-71743589 | MS.gene91415:intron | 45.0% |
| !! | TTCCATATGGACTAGCCCAT+AGG | + | chr1.3:71744497-71744516 | None:intergenic | 45.0% |
| !! | TTCCTATGGGCTAGTCCATA+TGG | - | chr1.3:71744492-71744511 | MS.gene91415:intron | 45.0% |
| !! | TTGCTCGGCTTATTGGTTCT+TGG | + | chr1.3:71746907-71746926 | None:intergenic | 45.0% |
| !! | AAAAAAAATAAAACTTTAAA+AGG | + | chr1.3:71745995-71746014 | None:intergenic | 5.0% |
| !!! | TATTATTTAAAATTAATTCA+TGG | - | chr1.3:71742722-71742741 | MS.gene91415:intron | 5.0% |
| AACATCAACTAGCGTTGCCC+CGG | + | chr1.3:71743825-71743844 | None:intergenic | 50.0% | |
| AACATGAGTGGGGTCCGTAT+CGG | - | chr1.3:71742429-71742448 | MS.gene91415:intron | 50.0% | |
| AAGTGTGTCTGGGAAGTGAG+AGG | + | chr1.3:71745273-71745292 | None:intergenic | 50.0% | |
| AATCCCACCATCCACTAGCT+GGG | + | chr1.3:71744544-71744563 | None:intergenic | 50.0% | |
| ACCAATAAGCCGAGCAATGC+TGG | - | chr1.3:71746910-71746929 | MS.gene91415:CDS | 50.0% | |
| ATAGTCGGTACCTCTGAGCA+TGG | - | chr1.3:71745399-71745418 | MS.gene91415:intron | 50.0% | |
| ATTGTTCGACTCCCCTGATG+TGG | + | chr1.3:71746717-71746736 | None:intergenic | 50.0% | |
| CCAAGCATTACCCCAAAAGC+TGG | + | chr1.3:71743514-71743533 | None:intergenic | 50.0% | |
| CCAATAAGCCGAGCAATGCT+GGG | - | chr1.3:71746911-71746930 | MS.gene91415:CDS | 50.0% | |
| CCACACATTGCACTGTCACT+AGG | - | chr1.3:71742866-71742885 | MS.gene91415:intron | 50.0% | |
| CCCACTCATGTTTGCGCAAA+TGG | + | chr1.3:71742421-71742440 | None:intergenic | 50.0% | |
| CCTAGTGACAGTGCAATGTG+TGG | + | chr1.3:71742869-71742888 | None:intergenic | 50.0% | |
| CGAGTAGCGAGTTCAAGAGT+TGG | + | chr1.3:71741822-71741841 | None:intergenic | 50.0% | |
| CTCAAGGTCTCAGGTTCCTA+TGG | - | chr1.3:71744478-71744497 | MS.gene91415:intron | 50.0% | |
| CTCATGTGAACTCTTGGGCT+TGG | + | chr1.3:71745706-71745725 | None:intergenic | 50.0% | |
| GCCGTGATATCGGATTATGG+CGG | + | chr1.3:71743073-71743092 | None:intergenic | 50.0% | |
| GCGACAGTAACTCTTCTTCC+GGG | + | chr1.3:71744803-71744822 | None:intergenic | 50.0% | |
| GGAACAGCTATGCTGACAGT+GGG | + | chr1.3:71741777-71741796 | None:intergenic | 50.0% | |
| GGCGACAGTAACTCTTCTTC+CGG | + | chr1.3:71744804-71744823 | None:intergenic | 50.0% | |
| TAGGAACCTGAGACCTTGAG+AGG | + | chr1.3:71744478-71744497 | None:intergenic | 50.0% | |
| TCATCCAAGCCTAGGGAAGA+AGG | - | chr1.3:71745173-71745192 | MS.gene91415:intron | 50.0% | |
| TGGGGAAGAAGAAGAAGCAG+CGG | - | chr1.3:71741634-71741653 | MS.gene91415:CDS | 50.0% | |
| TGTTATCGAATCGGCCGTGA+CGG | - | chr1.3:71742981-71743000 | MS.gene91415:intron | 50.0% | |
| ! | GAGGTGTCTCAAGATACTGC+AGG | + | chr1.3:71742216-71742235 | None:intergenic | 50.0% |
| ! | GCAAATGGTGTGGAGCATCA+AGG | + | chr1.3:71742406-71742425 | None:intergenic | 50.0% |
| ! | GGTGCCGTGATATCGGATTA+TGG | + | chr1.3:71743076-71743095 | None:intergenic | 50.0% |
| !! | CACATGTGGTGCCGTGATAT+CGG | + | chr1.3:71743083-71743102 | None:intergenic | 50.0% |
| !! | GTGTAGGTTTGGATTGGCAG+TGG | + | chr1.3:71746387-71746406 | None:intergenic | 50.0% |
| !! | TGGTCGGTATGGTGGGATTT+TGG | - | chr1.3:71743101-71743120 | MS.gene91415:intron | 50.0% |
| !!! | CCAGCTTTTGGGGTAATGCT+TGG | - | chr1.3:71743511-71743530 | MS.gene91415:intron | 50.0% |
| AAAACCTGGCCAGTGGCCAT+GGG | + | chr1.3:71743746-71743765 | None:intergenic | 55.0% | |
| ACATGAGTGGGGTCCGTATC+GGG | - | chr1.3:71742430-71742449 | MS.gene91415:intron | 55.0% | |
| ACCACATGTGGTCGGTATGG+TGG | - | chr1.3:71743093-71743112 | MS.gene91415:intron | 55.0% | |
| ATCACGGCACCACATGTGGT+CGG | - | chr1.3:71743085-71743104 | MS.gene91415:intron | 55.0% | |
| ATCCCACCATCCACTAGCTG+GGG | + | chr1.3:71744543-71744562 | None:intergenic | 55.0% | |
| CAAACCAGCCAATCCGCCAA+AGG | + | chr1.3:71746166-71746185 | None:intergenic | 55.0% | |
| CAATCCCACCATCCACTAGC+TGG | + | chr1.3:71744545-71744564 | None:intergenic | 55.0% | |
| CCAATTTCGGCCGATATGGC+GGG | - | chr1.3:71743042-71743061 | MS.gene91415:intron | 55.0% | |
| CCACATGTGGTCGGTATGGT+GGG | - | chr1.3:71743094-71743113 | MS.gene91415:intron | 55.0% | |
| CCCAATTTCGGCCGATATGG+CGG | - | chr1.3:71743041-71743060 | MS.gene91415:intron | 55.0% | |
| CCCAGCATTGCTCGGCTTAT+TGG | + | chr1.3:71746914-71746933 | None:intergenic | 55.0% | |
| CCGCCATATCGGCCGAAATT+GGG | + | chr1.3:71743044-71743063 | None:intergenic | 55.0% | |
| CGATATCACGGCACCACATG+TGG | - | chr1.3:71743081-71743100 | MS.gene91415:intron | 55.0% | |
| CTTGGAGTGTGCTCCTCTCA+AGG | - | chr1.3:71744462-71744481 | MS.gene91415:intron | 55.0% | |
| GAAGAAGCAGCGGCTGACAA+CGG | - | chr1.3:71741644-71741663 | MS.gene91415:CDS | 55.0% | |
| GATGATGAGACAACCTCGCG+TGG | + | chr1.3:71745158-71745177 | None:intergenic | 55.0% | |
| GGCGGAAAATCCCGCCATAT+CGG | + | chr1.3:71743055-71743074 | None:intergenic | 55.0% | |
| GGGAACAGCTATGCTGACAG+TGG | + | chr1.3:71741778-71741797 | None:intergenic | 55.0% | |
| GTTATCGAATCGGCCGTGAC+GGG | - | chr1.3:71742982-71743001 | MS.gene91415:intron | 55.0% | |
| TCGGCCGAAATTGGGTATGG+TGG | + | chr1.3:71743036-71743055 | None:intergenic | 55.0% | |
| TGCTCCTTCTTCCCTAGGCT+TGG | + | chr1.3:71745180-71745199 | None:intergenic | 55.0% | |
| TGTGCTCCTCTCAAGGTCTC+AGG | - | chr1.3:71744469-71744488 | MS.gene91415:intron | 55.0% | |
| TTAAATGGGCCCCCAGCTAG+TGG | - | chr1.3:71744530-71744549 | MS.gene91415:intron | 55.0% | |
| ! | CTTGAGAGGAGCACACTCCA+AGG | + | chr1.3:71744464-71744483 | None:intergenic | 55.0% |
| ! | GGGGCAACGCTAGTTGATGT+TGG | - | chr1.3:71743824-71743843 | MS.gene91415:intron | 55.0% |
| !! | ATTGCCTTTGGCGGATTGGC+TGG | - | chr1.3:71746159-71746178 | MS.gene91415:CDS | 55.0% |
| !! | CAGCTAGTGGATGGTGGGAT+TGG | - | chr1.3:71744543-71744562 | MS.gene91415:intron | 55.0% |
| !! | CTTTGGCGGATTGGCTGGTT+TGG | - | chr1.3:71746164-71746183 | MS.gene91415:intron | 55.0% |
| !! | TTGTTTTGCCCCATGGCCAC+TGG | - | chr1.3:71743734-71743753 | MS.gene91415:CDS | 55.0% |
| AAACCTGGCCAGTGGCCATG+GGG | + | chr1.3:71743745-71743764 | None:intergenic | 60.0% | |
| CAAAACCTGGCCAGTGGCCA+TGG | + | chr1.3:71743747-71743766 | None:intergenic | 60.0% | |
| CAAATTGCGGTTGGCGCCCA+TGG | + | chr1.3:71744825-71744844 | None:intergenic | 60.0% | |
| CATGGGCGCCAACCGCAATT+TGG | - | chr1.3:71744823-71744842 | MS.gene91415:intron | 60.0% | |
| CCCACCATACCGACCACATG+TGG | + | chr1.3:71743097-71743116 | None:intergenic | 60.0% | |
| CCCGCCATATCGGCCGAAAT+TGG | + | chr1.3:71743045-71743064 | None:intergenic | 60.0% | |
| GGCACCACATGTGGTCGGTA+TGG | - | chr1.3:71743090-71743109 | MS.gene91415:intron | 60.0% | |
| GGGCTTGGCAAGCCGTAGTT+TGG | + | chr1.3:71745691-71745710 | None:intergenic | 60.0% | |
| TCCCACCATCCACTAGCTGG+GGG | + | chr1.3:71744542-71744561 | None:intergenic | 60.0% | |
| ! | GAATCGGCCGTGACGGGAAT+CGG | - | chr1.3:71742988-71743007 | MS.gene91415:intron | 60.0% |
| ! | GCACTGTTGTCTATGGCGGG+TGG | + | chr1.3:71743144-71743163 | None:intergenic | 60.0% |
| ! | TGGTGTGGAGCATCAAGGGG+TGG | + | chr1.3:71742401-71742420 | None:intergenic | 60.0% |
| !! | ACTGCCACCGATTCCCGTCA+CGG | + | chr1.3:71742998-71743017 | None:intergenic | 60.0% |
| !! | CTGTTGTCTATGGCGGGTGG+TGG | + | chr1.3:71743141-71743160 | None:intergenic | 60.0% |
| !! | GATGGTGGGATTGGTACCGC+CGG | - | chr1.3:71744552-71744571 | MS.gene91415:intron | 60.0% |
| !!! | GGGATTTTGGCTCTCCGCCA+TGG | - | chr1.3:71743114-71743133 | MS.gene91415:CDS | 60.0% |
| ATGGGCCCCCAGCTAGTGGA+TGG | - | chr1.3:71744534-71744553 | MS.gene91415:intron | 65.0% | |
| GAGTGGGGTCCGTATCGGGA+AGG | - | chr1.3:71742434-71742453 | MS.gene91415:intron | 65.0% | |
| GGGGTCCGTATCGGGAAGGT+AGG | - | chr1.3:71742438-71742457 | MS.gene91415:intron | 65.0% | |
| ! | GCCCCCAGCTAGTGGATGGT+GGG | - | chr1.3:71744538-71744557 | MS.gene91415:intron | 65.0% |
| !! | CTATGGCGGGTGGTGGTCCA+TGG | + | chr1.3:71743134-71743153 | None:intergenic | 65.0% |
| TTGCCCCATGGCCACTGGCC+AGG | - | chr1.3:71743739-71743758 | MS.gene91415:CDS | 70.0% | |
| ! | GGCCCCCAGCTAGTGGATGG+TGG | - | chr1.3:71744537-71744556 | MS.gene91415:intron | 70.0% |
| ! | TCGGCCGTGACGGGAATCGG+TGG | - | chr1.3:71742991-71743010 | MS.gene91415:intron | 70.0% |
| ! | TGGCGGGTGGTGGTCCATGG+CGG | + | chr1.3:71743131-71743150 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 71741633 | 71746937 | 71741633 | ID=MS.gene91415 |
| chr1.3 | mRNA | 71741633 | 71746937 | 71741633 | ID=MS.gene91415.t1;Parent=MS.gene91415 |
| chr1.3 | exon | 71746728 | 71746937 | 71746728 | ID=MS.gene91415.t1.exon1;Parent=MS.gene91415.t1 |
| chr1.3 | CDS | 71746728 | 71746937 | 71746728 | ID=cds.MS.gene91415.t1;Parent=MS.gene91415.t1 |
| chr1.3 | exon | 71746565 | 71746612 | 71746565 | ID=MS.gene91415.t1.exon2;Parent=MS.gene91415.t1 |
| chr1.3 | CDS | 71746565 | 71746612 | 71746565 | ID=cds.MS.gene91415.t1;Parent=MS.gene91415.t1 |
| chr1.3 | exon | 71746285 | 71746452 | 71746285 | ID=MS.gene91415.t1.exon3;Parent=MS.gene91415.t1 |
| chr1.3 | CDS | 71746285 | 71746452 | 71746285 | ID=cds.MS.gene91415.t1;Parent=MS.gene91415.t1 |
| chr1.3 | exon | 71746115 | 71746181 | 71746115 | ID=MS.gene91415.t1.exon4;Parent=MS.gene91415.t1 |
| chr1.3 | CDS | 71746115 | 71746181 | 71746115 | ID=cds.MS.gene91415.t1;Parent=MS.gene91415.t1 |
| chr1.3 | exon | 71744714 | 71744778 | 71744714 | ID=MS.gene91415.t1.exon5;Parent=MS.gene91415.t1 |
| chr1.3 | CDS | 71744714 | 71744778 | 71744714 | ID=cds.MS.gene91415.t1;Parent=MS.gene91415.t1 |
| chr1.3 | exon | 71743719 | 71743797 | 71743719 | ID=MS.gene91415.t1.exon6;Parent=MS.gene91415.t1 |
| chr1.3 | CDS | 71743719 | 71743797 | 71743719 | ID=cds.MS.gene91415.t1;Parent=MS.gene91415.t1 |
| chr1.3 | exon | 71743305 | 71743420 | 71743305 | ID=MS.gene91415.t1.exon7;Parent=MS.gene91415.t1 |
| chr1.3 | CDS | 71743305 | 71743420 | 71743305 | ID=cds.MS.gene91415.t1;Parent=MS.gene91415.t1 |
| chr1.3 | exon | 71743107 | 71743186 | 71743107 | ID=MS.gene91415.t1.exon8;Parent=MS.gene91415.t1 |
| chr1.3 | CDS | 71743107 | 71743186 | 71743107 | ID=cds.MS.gene91415.t1;Parent=MS.gene91415.t1 |
| chr1.3 | exon | 71742352 | 71742421 | 71742352 | ID=MS.gene91415.t1.exon9;Parent=MS.gene91415.t1 |
| chr1.3 | CDS | 71742352 | 71742421 | 71742352 | ID=cds.MS.gene91415.t1;Parent=MS.gene91415.t1 |
| chr1.3 | exon | 71741824 | 71741901 | 71741824 | ID=MS.gene91415.t1.exon10;Parent=MS.gene91415.t1 |
| chr1.3 | CDS | 71741824 | 71741901 | 71741824 | ID=cds.MS.gene91415.t1;Parent=MS.gene91415.t1 |
| chr1.3 | exon | 71741633 | 71741695 | 71741633 | ID=MS.gene91415.t1.exon11;Parent=MS.gene91415.t1 |
| chr1.3 | CDS | 71741633 | 71741695 | 71741633 | ID=cds.MS.gene91415.t1;Parent=MS.gene91415.t1 |
| Gene Sequence |
| Protein sequence |
