AlfalfaGEDB | MS.gene044498

M. sativa cultivar XinJiangDaYe / MS.gene044498

KEGG: K11129
GO: GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005730 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0097159 GO:0110165 GO:1901363
PFAM: PF01248.29

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene044498.t1	AFK35508.1	96.8	157	1	1	1	157	1	153	3.10E-69	271.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene044498.t1	Q9LEY9	62.8	156	57	1	1	156	1	155	1.1e-46	187.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene044498.t1	G7JT47	96.8	157	1	1	1	157	1	153	2.2e-69	271.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene90954	MS.gene044498	PPI
MS.gene39294	MS.gene044498	PPI
MS.gene59503	MS.gene044498	PPI
MS.gene044498	MS.gene29298	PPI
MS.gene45646	MS.gene044498	PPI
MS.gene99649	MS.gene044498	PPI
MS.gene78322	MS.gene044498	PPI
MS.gene31515	MS.gene044498	PPI
MS.gene66284	MS.gene044498	PPI
MS.gene02109	MS.gene044498	PPI
MS.gene059422	MS.gene044498	PPI
MS.gene044498	MS.gene066536	PPI
MS.gene044498	MS.gene072064	PPI
MS.gene044498	MS.gene072431	PPI
MS.gene72894	MS.gene044498	PPI
MS.gene037324	MS.gene044498	PPI
MS.gene51868	MS.gene044498	PPI
MS.gene044498	MS.gene52097	PPI
MS.gene90957	MS.gene044498	PPI
MS.gene044498	MS.gene054186	PPI
MS.gene000714	MS.gene044498	PPI
MS.gene044498	MS.gene67483	PPI
MS.gene038837	MS.gene044498	PPI
MS.gene044498	MS.gene029415	PPI
MS.gene040757	MS.gene044498	PPI
MS.gene50177	MS.gene044498	PPI
MS.gene99744	MS.gene044498	PPI
MS.gene044498	MS.gene035486	PPI
MS.gene029242	MS.gene044498	PPI
MS.gene047206	MS.gene044498	PPI
MS.gene044498	MS.gene067809	PPI
MS.gene93333	MS.gene044498	PPI
MS.gene61498	MS.gene044498	PPI
MS.gene028023	MS.gene044498	PPI
MS.gene044498	MS.gene045818	PPI
MS.gene045843	MS.gene044498	PPI
MS.gene07616	MS.gene044498	PPI
MS.gene81498	MS.gene044498	PPI
MS.gene044498	MS.gene74532	PPI
MS.gene00612	MS.gene044498	PPI
MS.gene020385	MS.gene044498	PPI
MS.gene49958	MS.gene044498	PPI
MS.gene066535	MS.gene044498	PPI
MS.gene64804	MS.gene044498	PPI
MS.gene046040	MS.gene044498	PPI
MS.gene75111	MS.gene044498	PPI
MS.gene044537	MS.gene044498	PPI
MS.gene003501	MS.gene044498	PPI
MS.gene061905	MS.gene044498	PPI
MS.gene29479	MS.gene044498	PPI
MS.gene020215	MS.gene044498	PPI
MS.gene065146	MS.gene044498	PPI
MS.gene030258	MS.gene044498	PPI
MS.gene91415	MS.gene044498	PPI
MS.gene044498	MS.gene067951	PPI
MS.gene044498	MS.gene29300	PPI
MS.gene62426	MS.gene044498	PPI
MS.gene044498	MS.gene072432	PPI
MS.gene81001	MS.gene044498	PPI
MS.gene038784	MS.gene044498	PPI
MS.gene044498	MS.gene64659	PPI
MS.gene98436	MS.gene044498	PPI
MS.gene073734	MS.gene044498	PPI
MS.gene93859	MS.gene044498	PPI
MS.gene96983	MS.gene044498	PPI
MS.gene78323	MS.gene044498	PPI
MS.gene044498	MS.gene003314	PPI
MS.gene032998	MS.gene044498	PPI
MS.gene80570	MS.gene044498	PPI
MS.gene056443	MS.gene044498	PPI
MS.gene018682	MS.gene044498	PPI
MS.gene044498	MS.gene001986	PPI
MS.gene23466	MS.gene044498	PPI
MS.gene29299	MS.gene044498	PPI
MS.gene072433	MS.gene044498	PPI
MS.gene064180	MS.gene044498	PPI
MS.gene95758	MS.gene044498	PPI
MS.gene97932	MS.gene044498	PPI
MS.gene044498	MS.gene78324	PPI
MS.gene067362	MS.gene044498	PPI
MS.gene80786	MS.gene044498	PPI
MS.gene066537	MS.gene044498	PPI
MS.gene044498	MS.gene32569	PPI
MS.gene45344	MS.gene044498	PPI
MS.gene036800	MS.gene044498	PPI
MS.gene03059	MS.gene044498	PPI
MS.gene41916	MS.gene044498	PPI
MS.gene08205	MS.gene044498	PPI
MS.gene044498	MS.gene64512	PPI
MS.gene044498	MS.gene002038	PPI
MS.gene09845	MS.gene044498	PPI
MS.gene056257	MS.gene044498	PPI
MS.gene057730	MS.gene044498	PPI
MS.gene59047	MS.gene044498	PPI
MS.gene022752	MS.gene044498	PPI
MS.gene018553	MS.gene044498	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene044498.t1	MTR_4g112780	97.452	157	0	1	1	157	1	153	1.26e-106	301
MS.gene044498.t1	MTR_4g114330	34.483	116	75	1	21	136	4	118	2.17e-14	66.2
MS.gene044498.t1	MTR_5g077600	72.727	44	11	1	105	148	23	65	6.86e-14	63.2
MS.gene044498.t1	MTR_0011s0330	34.821	112	72	1	25	136	8	118	2.09e-13	63.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene044498.t1	AT5G08180	68.153	157	49	1	1	157	1	156	4.91e-76	224
MS.gene044498.t1	AT5G08180	68.153	157	49	1	1	157	1	156	4.91e-76	224
MS.gene044498.t1	AT4G12600	34.188	117	76	1	20	136	3	118	5.16e-13	62.4
MS.gene044498.t1	AT5G20160	35.714	112	71	1	25	136	8	118	5.27e-13	62.4
MS.gene044498.t1	AT4G22380	34.821	112	72	1	25	136	8	118	9.05e-13	62.0

Find 31 sgRNAs with CRISPR-Local

Find 107 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGTATAAGGCGAGGTCAAAA+AGG	0.296737	8.1:+15536589	MS.gene044498:CDS
CCCATTGCAAAACCTCTTGC+TGG	0.348880	8.1:+15535739	MS.gene044498:CDS
TGAGATAGTTCACCCTTTGA+AGG	0.372203	8.1:-15537655	None:intergenic
CGCAGAGTGTGTATTATAGC+TGG	0.392404	8.1:+15536802	MS.gene044498:intron
AGGAGGTGGTTAAAAGTATA+AGG	0.394940	8.1:+15536575	MS.gene044498:CDS
GTGCATAAAGAGAGGAGTTA+AGG	0.402782	8.1:+15536555	MS.gene044498:CDS
TAGTTCACCCTTTGAAGGCT+TGG	0.444404	8.1:-15537650	None:intergenic
ACATGAGTGATGACATCAAT+AGG	0.449731	8.1:-15536835	None:intergenic
TCCTTATCCTCACATAAAAT+CGG	0.452854	8.1:-15536859	None:intergenic
TTAGATGAGACATATACATA+TGG	0.460404	8.1:-15536886	None:intergenic
GTCCAGGACCTTGCAACGGC+AGG	0.468819	8.1:+15537589	MS.gene044498:intron
CGACAGTGAAGGTGAGAAAT+CGG	0.483487	8.1:+15535675	MS.gene044498:CDS
GTGATGACCAAGCCTTCAAA+GGG	0.500756	8.1:+15537643	MS.gene044498:CDS
TCGTTGCTCCTGCCGTTGCA+AGG	0.501816	8.1:-15537597	None:intergenic
AGTGATGACCAAGCCTTCAA+AGG	0.525648	8.1:+15537642	MS.gene044498:CDS
ACACTCAAGCTTGTTAAAAG+AGG	0.527156	8.1:+15535781	MS.gene044498:CDS
AAAGAGAGGAGTTAAGGAGG+TGG	0.543156	8.1:+15536561	MS.gene044498:CDS
CGGTGCAGAGGGAGAAGGAG+AGG	0.549279	8.1:+15535695	MS.gene044498:CDS
CATAAAGAGAGGAGTTAAGG+AGG	0.557458	8.1:+15536558	MS.gene044498:CDS
GAAAGCTTCTTTCCAGCAAG+AGG	0.560382	8.1:-15535751	None:intergenic
ATCACTAAAACACAACAAGT+TGG	0.561953	8.1:-15537625	None:intergenic
GAAGGAGAGGAAGAAGATGC+AGG	0.571568	8.1:+15535708	MS.gene044498:CDS
GAAATCGGTGCAGAGGGAGA+AGG	0.585599	8.1:+15535690	MS.gene044498:CDS
AAGGTGAGAAATCGGTGCAG+AGG	0.589190	8.1:+15535683	MS.gene044498:CDS
GCAGAGTGTGTATTATAGCT+GGG	0.592201	8.1:+15536803	MS.gene044498:intron
AGGTGAGAAATCGGTGCAGA+GGG	0.594395	8.1:+15535684	MS.gene044498:CDS
AAAGGGTGAACTATCTCAAG+AGG	0.620179	8.1:+15537660	MS.gene044498:CDS
GAAAACAAGTGCATAAAGAG+AGG	0.625540	8.1:+15536547	MS.gene044498:CDS
ATTTGTCCAGGACCTTGCAA+CGG	0.636321	8.1:+15537585	MS.gene044498:intron
GAAATGGGAAGCGACAGTGA+AGG	0.681973	8.1:+15535664	None:intergenic
GTGGTTAAAAGTATAAGGCG+AGG	0.693539	8.1:+15536580	MS.gene044498:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ACAATTGAAACATAAAAAAT+GGG	-	chr8.1:15536741-15536760	None:intergenic	15.0%
!!	TTATAAGCTATAAACTATAT+TGG	+	chr8.1:15536154-15536173	MS.gene044498:intron	15.0%
!!	TTCCAAAAAAAAAGAAAAAA+CGG	-	chr8.1:15536395-15536414	None:intergenic	15.0%
!!!	TTTTTTCTTTTTTTTTGGAA+TGG	+	chr8.1:15536395-15536414	MS.gene044498:intron	15.0%
!!	ATAGCTTATAAAAACAACTT+AGG	-	chr8.1:15536145-15536164	None:intergenic	20.0%
!!	ATTCATAACATAACATTCTT+GGG	-	chr8.1:15536307-15536326	None:intergenic	20.0%
!!	CACAATTGAAACATAAAAAA+TGG	-	chr8.1:15536742-15536761	None:intergenic	20.0%
!!	CTATTGTATTCATAATATAC+AGG	-	chr8.1:15537324-15537343	None:intergenic	20.0%
!!	GAATTGTTGATATATTATGT+AGG	-	chr8.1:15537396-15537415	None:intergenic	20.0%
!!	TACATAAATCTTTGTCTTAT+GGG	+	chr8.1:15536489-15536508	MS.gene044498:intron	20.0%
!!	TCATAAATAACTAAAAGTTG+AGG	+	chr8.1:15537060-15537079	MS.gene044498:intron	20.0%
!!	TTACATAAATCTTTGTCTTA+TGG	+	chr8.1:15536488-15536507	MS.gene044498:intron	20.0%
!!	TTCCATTCAAATATGTTATA+TGG	-	chr8.1:15537184-15537203	None:intergenic	20.0%
!!!	CATTTTTTATGTTTCAATTG+TGG	+	chr8.1:15536740-15536759	MS.gene044498:intron	20.0%
!!!	GTTGATTCTGTAATTTAAAA+AGG	+	chr8.1:15536431-15536450	MS.gene044498:intron	20.0%
!!!	TAATGAAAATCGTTAATTTG+TGG	+	chr8.1:15535841-15535860	MS.gene044498:intron	20.0%
!!!	TTTCAGTTTCGTTTTAAATA+TGG	+	chr8.1:15537428-15537447	MS.gene044498:intron	20.0%
!	AATAAGTTGTTTATCCAAAC+AGG	-	chr8.1:15536021-15536040	None:intergenic	25.0%
!	ATATGGTATTAAGAGAAACA+TGG	+	chr8.1:15537445-15537464	MS.gene044498:intron	25.0%
!	ATTTATCTTCCTTGACAAAA+TGG	+	chr8.1:15536688-15536707	MS.gene044498:intron	25.0%
!	GATTCATAACATAACATTCT+TGG	-	chr8.1:15536308-15536327	None:intergenic	25.0%
!	GTCCATATAACATATTTGAA+TGG	+	chr8.1:15537179-15537198	MS.gene044498:intron	25.0%
!	TTAGATGAGACATATACATA+TGG	-	chr8.1:15536889-15536908	None:intergenic	25.0%
!	TTCATAACATAACATTCTTG+GGG	-	chr8.1:15536306-15536325	None:intergenic	25.0%
!!	CTTATTCTAAAGAGAGATTA+GGG	-	chr8.1:15536986-15537005	None:intergenic	25.0%
!!	TACATTTTGTAAGTCTGTTT+TGG	-	chr8.1:15536245-15536264	None:intergenic	25.0%
!!	TCTTATTCTAAAGAGAGATT+AGG	-	chr8.1:15536987-15537006	None:intergenic	25.0%
!!	TTTCAAAGTACTAGAGTAAT+TGG	-	chr8.1:15537541-15537560	None:intergenic	25.0%
!!!	AATTTTTGAGATATTTGTCC+AGG	+	chr8.1:15537573-15537592	MS.gene044498:intron	25.0%
!!!	ATGAACTTGTTATGGAATTA+AGG	+	chr8.1:15535994-15536013	MS.gene044498:intron	25.0%
!!!	CTTCAAAAATGAACTTGTTA+TGG	+	chr8.1:15535986-15536005	MS.gene044498:intron	25.0%
!!!	TGAACTTGTTATGGAATTAA+GGG	+	chr8.1:15535995-15536014	MS.gene044498:intron	25.0%
!!!	TGCCGTTTTTTCTTTTTTTT+TGG	+	chr8.1:15536390-15536409	MS.gene044498:intron	25.0%
	AAATCTGCTATGCAATCATT+TGG	+	chr8.1:15537491-15537510	MS.gene044498:intron	30.0%
	AACATTAGATTGCTCACAAA+GGG	+	chr8.1:15536626-15536645	MS.gene044498:intron	30.0%
	ACAATTTGTGTTATGAATGC+CGG	-	chr8.1:15537144-15537163	None:intergenic	30.0%
	ATCACTAAAACACAACAAGT+TGG	-	chr8.1:15537628-15537647	None:intergenic	30.0%
	ATGGTAAAAAGACAGCAAAA+AGG	-	chr8.1:15536360-15536379	None:intergenic	30.0%
	GAGAAGAAGGCAAAAAATAA+GGG	-	chr8.1:15536780-15536799	None:intergenic	30.0%
	TAACATTAGATTGCTCACAA+AGG	+	chr8.1:15536625-15536644	MS.gene044498:intron	30.0%
	TATGACATCAAATTAACCTC+AGG	-	chr8.1:15537045-15537064	None:intergenic	30.0%
	TCCTTATCCTCACATAAAAT+CGG	-	chr8.1:15536862-15536881	None:intergenic	30.0%
	TGAGAAGAAGGCAAAAAATA+AGG	-	chr8.1:15536781-15536800	None:intergenic	30.0%
!	ATAACACAAATTGTGTTGAC+AGG	+	chr8.1:15537150-15537169	MS.gene044498:intron	30.0%
!	GAATGTATGCTTTTCTATAC+TGG	+	chr8.1:15537201-15537220	MS.gene044498:intron	30.0%
!	GCTTGAATGTTTTGTCAATT+TGG	+	chr8.1:15536464-15536483	MS.gene044498:intron	30.0%
	AAAACGGCAGCAAATTTGTA+TGG	-	chr8.1:15536379-15536398	None:intergenic	35.0%
	ACATGAGTGATGACATCAAT+AGG	-	chr8.1:15536838-15536857	None:intergenic	35.0%
	AGCACTCAAGTTACAAAACA+AGG	-	chr8.1:15537111-15537130	None:intergenic	35.0%
	CACAGTTTATCGAGAAAGAA+AGG	+	chr8.1:15537350-15537369	MS.gene044498:intron	35.0%
	CTTGACAAAATGGTTACTCA+AGG	+	chr8.1:15536698-15536717	MS.gene044498:intron	35.0%
	GAAAACAAGTGCATAAAGAG+AGG	+	chr8.1:15536547-15536566	MS.gene044498:CDS	35.0%
	GGAGAGTTCTTGAAAATAAG+TGG	+	chr8.1:15536175-15536194	MS.gene044498:intron	35.0%
	TAAAGAGAGATTAGGGAAAC+AGG	-	chr8.1:15536979-15536998	None:intergenic	35.0%
	TAATATACAGGTCTATGAGC+TGG	-	chr8.1:15537312-15537331	None:intergenic	35.0%
	TCTATGAGCTGGATTATAGA+TGG	-	chr8.1:15537301-15537320	None:intergenic	35.0%
	TGAAATAAGCCAATCCAAAC+TGG	+	chr8.1:15536280-15536299	MS.gene044498:intron	35.0%
	TTTCTTACACATATAGCCTG+AGG	+	chr8.1:15537026-15537045	MS.gene044498:intron	35.0%
!	AACAAGCTTGAGTGTTTTCT+TGG	-	chr8.1:15535776-15535795	None:intergenic	35.0%
!	AGGAGGTGGTTAAAAGTATA+AGG	+	chr8.1:15536575-15536594	MS.gene044498:CDS	35.0%
!	CTTGAGTAACCATTTTGTCA+AGG	-	chr8.1:15536700-15536719	None:intergenic	35.0%
!	TCATGTTCCGATTTTATGTG+AGG	+	chr8.1:15536852-15536871	MS.gene044498:CDS	35.0%
!	TCCGATTTTATGTGAGGATA+AGG	+	chr8.1:15536858-15536877	MS.gene044498:CDS	35.0%
!!	ACACTCAAGCTTGTTAAAAG+AGG	+	chr8.1:15535781-15535800	MS.gene044498:CDS	35.0%
	AAAGGGTGAACTATCTCAAG+AGG	+	chr8.1:15537660-15537679	MS.gene044498:CDS	40.0%
	AACTTTGCGCTGAATCTTGA+TGG	+	chr8.1:15536923-15536942	MS.gene044498:intron	40.0%
	AAGGTGCAACATCATCAATG+AGG	-	chr8.1:15537092-15537111	None:intergenic	40.0%
	AGTATAAGGCGAGGTCAAAA+AGG	+	chr8.1:15536589-15536608	MS.gene044498:CDS	40.0%
	ATCAAGATTCAGCGCAAAGT+TGG	-	chr8.1:15536924-15536943	None:intergenic	40.0%
	CATAAAGAGAGGAGTTAAGG+AGG	+	chr8.1:15536558-15536577	MS.gene044498:CDS	40.0%
	GCAGAGTGTGTATTATAGCT+GGG	+	chr8.1:15536803-15536822	MS.gene044498:intron	40.0%
	GCTTATTTCAGCTGATCTAC+TGG	-	chr8.1:15536270-15536289	None:intergenic	40.0%
	GTATAAGGCGAGGTCAAAAA+GGG	+	chr8.1:15536590-15536609	MS.gene044498:CDS	40.0%
	GTGCATAAAGAGAGGAGTTA+AGG	+	chr8.1:15536555-15536574	MS.gene044498:CDS	40.0%
	TATGGAATTAAGGGCCTGTT+TGG	+	chr8.1:15536004-15536023	MS.gene044498:intron	40.0%
	TGAGATAGTTCACCCTTTGA+AGG	-	chr8.1:15537658-15537677	None:intergenic	40.0%
!	CTAAGCATTGCAGTGTTTCT+GGG	+	chr8.1:15535867-15535886	MS.gene044498:intron	40.0%
!	GTGGTTAAAAGTATAAGGCG+AGG	+	chr8.1:15536580-15536599	MS.gene044498:CDS	40.0%
!	TCTAAGCATTGCAGTGTTTC+TGG	+	chr8.1:15535866-15535885	MS.gene044498:intron	40.0%
!	TTGAGTGCTTTTCCTTATGC+CGG	+	chr8.1:15537122-15537141	MS.gene044498:intron	40.0%
!!!	TTGCAGTGTTTCTGGGTTTT+TGG	+	chr8.1:15535874-15535893	MS.gene044498:intron	40.0%
	AAAGAGAGGAGTTAAGGAGG+TGG	+	chr8.1:15536561-15536580	MS.gene044498:CDS	45.0%
	AGAGAGATTAGGGAAACAGG+CGG	-	chr8.1:15536976-15536995	None:intergenic	45.0%
	AGTGATGACCAAGCCTTCAA+AGG	+	chr8.1:15537642-15537661	MS.gene044498:CDS	45.0%
	ATTTGTCCAGGACCTTGCAA+CGG	+	chr8.1:15537585-15537604	MS.gene044498:intron	45.0%
	CGACAGTGAAGGTGAGAAAT+CGG	+	chr8.1:15535675-15535694	MS.gene044498:CDS	45.0%
	CGCAGAGTGTGTATTATAGC+TGG	+	chr8.1:15536802-15536821	MS.gene044498:intron	45.0%
	GAAAGCTTCTTTCCAGCAAG+AGG	-	chr8.1:15535754-15535773	None:intergenic	45.0%
	GTGATGACCAAGCCTTCAAA+GGG	+	chr8.1:15537643-15537662	MS.gene044498:CDS	45.0%
	GTGTTATGAATGCCGGCATA+AGG	-	chr8.1:15537137-15537156	None:intergenic	45.0%
	TAACATTCTTGGGGCCAGTT+TGG	-	chr8.1:15536297-15536316	None:intergenic	45.0%
!	AGCAAGAGGTTTTGCAATGG+GGG	-	chr8.1:15535740-15535759	None:intergenic	45.0%
!	CAGCAAGAGGTTTTGCAATG+GGG	-	chr8.1:15535741-15535760	None:intergenic	45.0%
!	CCAGCAAGAGGTTTTGCAAT+GGG	-	chr8.1:15535742-15535761	None:intergenic	45.0%
!	TAGTTCACCCTTTGAAGGCT+TGG	-	chr8.1:15537653-15537672	None:intergenic	45.0%
!	TCCAGCAAGAGGTTTTGCAA+TGG	-	chr8.1:15535743-15535762	None:intergenic	45.0%
	AAGGTGAGAAATCGGTGCAG+AGG	+	chr8.1:15535683-15535702	MS.gene044498:CDS	50.0%
	AGGTGAGAAATCGGTGCAGA+GGG	+	chr8.1:15535684-15535703	MS.gene044498:CDS	50.0%
	CACACTCTGCGTTGAGAAGA+AGG	-	chr8.1:15536793-15536812	None:intergenic	50.0%
	CCCATTGCAAAACCTCTTGC+TGG	+	chr8.1:15535739-15535758	MS.gene044498:CDS	50.0%
	GAAGGAGAGGAAGAAGATGC+AGG	+	chr8.1:15535708-15535727	MS.gene044498:CDS	50.0%
	TTCTTGGGGCCAGTTTGGAT+TGG	-	chr8.1:15536292-15536311	None:intergenic	50.0%
	GAAATCGGTGCAGAGGGAGA+AGG	+	chr8.1:15535690-15535709	MS.gene044498:CDS	55.0%
	TCGTTGCTCCTGCCGTTGCA+AGG	-	chr8.1:15537600-15537619	None:intergenic	60.0%
	CGGTGCAGAGGGAGAAGGAG+AGG	+	chr8.1:15535695-15535714	MS.gene044498:CDS	65.0%
	CTCCTGCCGTTGCAAGGTCC+TGG	-	chr8.1:15537594-15537613	None:intergenic	65.0%
	GTCCAGGACCTTGCAACGGC+AGG	+	chr8.1:15537589-15537608	MS.gene044498:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	15535667	15537756	15535667	ID=MS.gene044498
chr8.1	mRNA	15535667	15537756	15535667	ID=MS.gene044498.t1;Parent=MS.gene044498
chr8.1	exon	15535667	15535802	15535667	ID=MS.gene044498.t1.exon1;Parent=MS.gene044498.t1
chr8.1	CDS	15535667	15535802	15535667	ID=cds.MS.gene044498.t1;Parent=MS.gene044498.t1
chr8.1	exon	15536542	15536611	15536542	ID=MS.gene044498.t1.exon2;Parent=MS.gene044498.t1
chr8.1	CDS	15536542	15536611	15536542	ID=cds.MS.gene044498.t1;Parent=MS.gene044498.t1
chr8.1	exon	15536807	15536912	15536807	ID=MS.gene044498.t1.exon3;Parent=MS.gene044498.t1
chr8.1	CDS	15536807	15536912	15536807	ID=cds.MS.gene044498.t1;Parent=MS.gene044498.t1
chr8.1	exon	15537595	15537756	15537595	ID=MS.gene044498.t1.exon4;Parent=MS.gene044498.t1
chr8.1	CDS	15537595	15537756	15537595	ID=cds.MS.gene044498.t1;Parent=MS.gene044498.t1

Gene Sequence

>MS.gene044498

ATGGGAAGCGACAGTGAAGGTGAGAAATCGGTGCAGAGGGAGAAGGAGAGGAAGAAGATGCAGGCTCTAGCCCCCATTGCAAAACCTCTTGCTGGAAAGAAGCTTTCCAAGAAAACACTCAAGCTTGTTAAAAGAGGTATTTTCGAAGCTTTTAAACACTATAGCTTGTTGAATTAATGAAAATCGTTAATTTGTGGCTTCTAAGCATTGCAGTGTTTCTGGGTTTTTGGAGTTAGTAAGAAAAATCACAACTTCTCTTTAATTTCAAAATGTATAATGCATCGAGTTTCTTATGTATGCTATGTAATTAGAGTATAAACTTCAAAAATGAACTTGTTATGGAATTAAGGGCCTGTTTGGATAAACAACTTATTTACAGCTTATAGCTCAAGCGCTTATCACACTTATGTACAAGCTTGCATAAGCTATGTTTATAGCAAAAGATTAAATTAACGTTAATTTGTTTTTGTATATGCCTAAGTTGTTTTTATAAGCTATAAACTATATTGGAGAGTTCTTGAAAATAAGTGGACAAAAGCTTATGAAAATTGTTATCAGCTGTTTTTACAAATTCTCCAAAACAGACTTACAAAATGTATGCCAGTAGATCAGCTGAAATAAGCCAATCCAAACTGGCCCCAAGAATGTTATGTTATGAATCTAAGTATTATATTTTGCTGTCTGCTGTTACCTTTTTGCTGTCTTTTTACCATACAAATTTGCTGCCGTTTTTTCTTTTTTTTTGGAATGGCTAATGTTAATTTGTTGATTCTGTAATTTAAAAAGGAAAAAAATTAGCTTGAATGTTTTGTCAATTTGGATTACATAAATCTTTGTCTTATGGGACTATACTAATCTATGTGTGTTCTTTTCAGCTGCTGAAAACAAGTGCATAAAGAGAGGAGTTAAGGAGGTGGTTAAAAGTATAAGGCGAGGTCAAAAAGGGTCAGTATTAAGCTAACATTAGATTGCTCACAAAGGGCATTAGAAATAATTAATTAATTCAAACTATGTTACTATCATTTATCTTCCTTGACAAAATGGTTACTCAAGGTGTATGTGAAGTGAATTCCCATTTTTTATGTTTCAATTGTGGAAAATAAATGTGTACCCTTATTTTTTGCCTTCTTCTCAACGCAGAGTGTGTATTATAGCTGGGAACATATCGCCTATTGATGTCATCACTCATGTTCCGATTTTATGTGAGGATAAGGACATTCCATATGTATATGTCTCATCTAAAGAAGTAAGTAACCAACTTTGCGCTGAATCTTGATGGTTTTTATCATTTAGTTAATACTATTGACCGCCTGTTTCCCTAATCTCTCTTTAGAATAAGAAAAATTTGTTGTCATATATTTTCTTACACATATAGCCTGAGGTTAATTTGATGTCATAAATAACTAAAAGTTGAGGCTTTTTCCTCATTGATGATGTTGCACCTTGTTTTGTAACTTGAGTGCTTTTCCTTATGCCGGCATTCATAACACAAATTGTGTTGACAGGAGTTGAGTCCATATAACATATTTGAATGGAATGTATGCTTTTCTATACTGGATTGAATCATTTAGAGTATATCATACTTCAAGAAACATCTTTCAGCTATTTTAATTTTTTTATAGACACATCTGCCATCTATAATCCAGCTCATAGACCTGTATATTATGAATACAATAGTCATTGCACAGTTTATCGAGAAAGAAAGGATAATTTTTTGCTTCTCTTACCTACATAATATATCAACAATTCAACATGTGATGTTTTCAGTTTCGTTTTAAATATGGTATTAAGAGAAACATGGTTGAAATTGCTATTTTTCAAAAAAAATCTGCTATGCAATCATTTGGTGTTCATATATATGTTAAGAAACTCCAATTACTCTAGTACTTTGAAAGTTCATATATTAAATTTTTGAGATATTTGTCCAGGACCTTGCAACGGCAGGAGCAACGAAGAGACCAACTTGTTGTGTTTTAGTGATGACCAAGCCTTCAAAGGGTGAACTATCTCAAGAGGTACAAGAGAAACTAAAGTCAGAGTATGATCAAGTTGCATCAGAGTGTAGAGAGCTTCAGTCTACACTTTTTTGA

Protein sequence

>MS.gene044498.t1

MGSDSEGEKSVQREKERKKMQALAPIAKPLAGKKLSKKTLKLVKRAAENKCIKRGVKEVVKSIRRGQKGVCIIAGNISPIDVITHVPILCEDKDIPYVYVSSKEDLATAGATKRPTCCVLVMTKPSKGELSQEVQEKLKSEYDQVASECRELQSTLF