Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91527.t1 | XP_003591068.2 | 93.5 | 339 | 14 | 4 | 1 | 333 | 1 | 337 | 5.20E-167 | 597 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91527.t1 | Q9SK91 | 45.5 | 325 | 146 | 8 | 14 | 329 | 1 | 303 | 7.6e-58 | 225.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91527.t1 | G7I7I3 | 93.5 | 339 | 14 | 4 | 1 | 333 | 1 | 337 | 3.8e-167 | 597.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene91527.t1 | TF | bHLH |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050170 | MS.gene91527 | -0.814382 | 1.59E-51 | -1.69E-46 |
MS.gene050328 | MS.gene91527 | 0.814589 | 1.43E-51 | -1.69E-46 |
MS.gene050338 | MS.gene91527 | 0.859415 | 4.20E-63 | -1.69E-46 |
MS.gene050790 | MS.gene91527 | 0.800988 | 1.11E-48 | -1.69E-46 |
MS.gene050904 | MS.gene91527 | -0.817786 | 2.75E-52 | -1.69E-46 |
MS.gene051272 | MS.gene91527 | 0.803635 | 3.17E-49 | -1.69E-46 |
MS.gene051718 | MS.gene91527 | 0.802746 | 4.85E-49 | -1.69E-46 |
MS.gene052383 | MS.gene91527 | 0.82849 | 8.74E-55 | -1.69E-46 |
MS.gene054614 | MS.gene91527 | 0.815635 | 8.36E-52 | -1.69E-46 |
MS.gene055251 | MS.gene91527 | 0.852914 | 3.38E-61 | -1.69E-46 |
MS.gene05589 | MS.gene91527 | -0.810212 | 1.29E-50 | -1.69E-46 |
MS.gene056266 | MS.gene91527 | -0.802851 | 4.61E-49 | -1.69E-46 |
MS.gene056354 | MS.gene91527 | 0.801678 | 8.04E-49 | -1.69E-46 |
MS.gene056583 | MS.gene91527 | 0.822128 | 2.79E-53 | -1.69E-46 |
MS.gene056618 | MS.gene91527 | 0.830192 | 3.37E-55 | -1.69E-46 |
MS.gene056694 | MS.gene91527 | 0.80624 | 9.06E-50 | -1.69E-46 |
MS.gene058334 | MS.gene91527 | 0.825668 | 4.14E-54 | -1.69E-46 |
MS.gene058382 | MS.gene91527 | 0.841239 | 5.36E-58 | -1.69E-46 |
MS.gene06042 | MS.gene91527 | 0.814526 | 1.47E-51 | -1.69E-46 |
MS.gene060982 | MS.gene91527 | -0.801428 | 9.05E-49 | -1.69E-46 |
MS.gene061044 | MS.gene91527 | 0.815298 | 9.93E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91527.t1 | MTR_1g082480 | 93.510 | 339 | 14 | 4 | 1 | 333 | 1 | 337 | 0.0 | 613 |
MS.gene91527.t1 | MTR_1g082480 | 93.528 | 309 | 12 | 4 | 1 | 303 | 1 | 307 | 0.0 | 554 |
MS.gene91527.t1 | MTR_7g113830 | 56.897 | 348 | 100 | 11 | 1 | 333 | 1 | 313 | 5.75e-123 | 356 |
MS.gene91527.t1 | MTR_3g099620 | 50.000 | 330 | 136 | 7 | 14 | 329 | 1 | 315 | 5.96e-100 | 297 |
MS.gene91527.t1 | MTR_5g064950 | 43.614 | 321 | 152 | 7 | 14 | 330 | 1 | 296 | 5.31e-80 | 246 |
MS.gene91527.t1 | MTR_8g066770 | 53.774 | 212 | 87 | 2 | 126 | 332 | 104 | 309 | 1.97e-74 | 232 |
MS.gene91527.t1 | MTR_5g064950 | 43.197 | 294 | 138 | 7 | 14 | 303 | 1 | 269 | 7.91e-70 | 220 |
MS.gene91527.t1 | MTR_8g024210 | 51.244 | 201 | 88 | 2 | 126 | 326 | 171 | 361 | 4.48e-58 | 191 |
MS.gene91527.t1 | MTR_0194s0050 | 47.748 | 222 | 97 | 5 | 118 | 326 | 166 | 381 | 7.76e-58 | 191 |
MS.gene91527.t1 | MTR_1g028470 | 33.218 | 289 | 144 | 8 | 54 | 321 | 30 | 290 | 6.00e-36 | 132 |
MS.gene91527.t1 | MTR_2g022280 | 40.860 | 186 | 107 | 2 | 136 | 321 | 1 | 183 | 6.40e-35 | 126 |
MS.gene91527.t1 | MTR_3g090850 | 33.333 | 252 | 120 | 6 | 117 | 321 | 76 | 326 | 1.55e-33 | 126 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91527.t1 | AT1G72210 | 46.491 | 342 | 133 | 9 | 14 | 330 | 1 | 317 | 3.11e-82 | 252 |
MS.gene91527.t1 | AT1G22490 | 44.248 | 339 | 132 | 11 | 14 | 330 | 1 | 304 | 2.66e-79 | 244 |
MS.gene91527.t1 | AT1G72210 | 46.984 | 315 | 117 | 10 | 14 | 303 | 1 | 290 | 1.17e-72 | 228 |
MS.gene91527.t1 | AT1G22490 | 43.910 | 312 | 118 | 11 | 14 | 303 | 1 | 277 | 7.87e-68 | 216 |
MS.gene91527.t1 | AT3G24140 | 43.556 | 225 | 112 | 3 | 115 | 327 | 176 | 397 | 8.04e-54 | 181 |
MS.gene91527.t1 | AT3G24140 | 43.556 | 225 | 112 | 3 | 115 | 327 | 176 | 397 | 1.05e-53 | 181 |
MS.gene91527.t1 | AT4G01460 | 43.602 | 211 | 107 | 2 | 126 | 331 | 105 | 308 | 4.57e-53 | 177 |
MS.gene91527.t1 | AT4G01460 | 43.602 | 211 | 107 | 2 | 126 | 331 | 105 | 308 | 4.57e-53 | 177 |
MS.gene91527.t1 | AT5G46690 | 45.455 | 231 | 93 | 4 | 126 | 329 | 78 | 302 | 1.06e-51 | 174 |
MS.gene91527.t1 | AT5G65320 | 45.024 | 211 | 106 | 4 | 124 | 329 | 90 | 295 | 5.93e-50 | 168 |
MS.gene91527.t1 | AT3G61950 | 45.455 | 198 | 94 | 3 | 126 | 322 | 117 | 301 | 1.10e-47 | 163 |
MS.gene91527.t1 | AT2G46810 | 46.701 | 197 | 92 | 4 | 127 | 322 | 112 | 296 | 1.54e-47 | 162 |
MS.gene91527.t1 | AT3G61950 | 45.000 | 200 | 96 | 3 | 126 | 324 | 168 | 354 | 3.06e-47 | 163 |
MS.gene91527.t1 | AT2G46810 | 46.535 | 202 | 89 | 5 | 127 | 324 | 184 | 370 | 6.78e-47 | 162 |
MS.gene91527.t1 | AT2G46810 | 46.535 | 202 | 89 | 5 | 127 | 324 | 172 | 358 | 6.84e-47 | 162 |
MS.gene91527.t1 | AT5G65320 | 46.196 | 184 | 90 | 3 | 124 | 303 | 90 | 268 | 6.33e-43 | 149 |
MS.gene91527.t1 | AT2G46810 | 41.304 | 230 | 88 | 6 | 127 | 324 | 112 | 326 | 6.81e-42 | 148 |
MS.gene91527.t1 | AT3G61950 | 46.667 | 165 | 75 | 2 | 126 | 290 | 117 | 268 | 1.67e-41 | 146 |
MS.gene91527.t1 | AT3G61950 | 46.667 | 165 | 75 | 2 | 126 | 290 | 168 | 319 | 5.82e-41 | 146 |
MS.gene91527.t1 | AT5G46690 | 44.390 | 205 | 81 | 4 | 126 | 303 | 78 | 276 | 2.92e-40 | 143 |
MS.gene91527.t1 | AT3G06120 | 37.234 | 188 | 95 | 2 | 136 | 309 | 1 | 179 | 2.38e-32 | 120 |
MS.gene91527.t1 | AT5G53210 | 56.923 | 65 | 28 | 0 | 134 | 198 | 100 | 164 | 5.77e-20 | 89.7 |
MS.gene91527.t1 | AT5G53210 | 56.923 | 65 | 28 | 0 | 134 | 198 | 100 | 164 | 5.81e-20 | 89.7 |
MS.gene91527.t1 | AT3G61950 | 71.429 | 42 | 12 | 0 | 126 | 167 | 168 | 209 | 4.43e-13 | 67.8 |
MS.gene91527.t1 | AT3G61950 | 71.429 | 42 | 12 | 0 | 126 | 167 | 168 | 209 | 4.43e-13 | 67.8 |
Find 43 sgRNAs with CRISPR-Local
Find 64 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTTGATTCCATAACTAAA+AGG | 0.292800 | 1.2:-60441069 | None:intergenic |
GGTGATCAAGCTTCTATAAT+TGG | 0.293785 | 1.2:+60441778 | MS.gene91527:CDS |
ACTCTATCTCTTTCCTCTTC+AGG | 0.299868 | 1.2:-60441000 | None:intergenic |
CAGCTCTTGAAAATGGTATC+TGG | 0.309667 | 1.2:+60442078 | MS.gene91527:CDS |
AATGAAAAGAATTCAGAAAA+TGG | 0.318161 | 1.2:-60441907 | None:intergenic |
GCCAAAACAGCTCTTGAAAA+TGG | 0.324313 | 1.2:+60442071 | MS.gene91527:CDS |
TCTAATTCTGCAGCTACTAT+TGG | 0.326308 | 1.2:+60441955 | MS.gene91527:CDS |
CATTTAAATGTTACTACTAC+TGG | 0.355694 | 1.2:+60442129 | MS.gene91527:CDS |
ATTGTCCTCCTTATGTAGAT+TGG | 0.357399 | 1.2:+60441181 | MS.gene91527:CDS |
TTTCTTGAACTTCATTCAAA+TGG | 0.360903 | 1.2:-60441233 | None:intergenic |
CTAAAAGGATCTTGTGTTTG+TGG | 0.365756 | 1.2:-60441054 | None:intergenic |
TTCTTGAACTTCATTCAAAT+GGG | 0.379399 | 1.2:-60441232 | None:intergenic |
TCTTTACTCTCTCAGTGTTA+AGG | 0.389543 | 1.2:+60442161 | MS.gene91527:CDS |
GTTGAATCCTATTGACCATC+TGG | 0.393376 | 1.2:-60442349 | None:intergenic |
CTGTATACCAGATGGTCAAT+AGG | 0.406963 | 1.2:+60442342 | MS.gene91527:CDS |
ACCCTTTGGATGTAAGAATC+TGG | 0.440881 | 1.2:-60441471 | None:intergenic |
GTTGAAGATGATTGCAAGCT+GGG | 0.453141 | 1.2:+60442296 | MS.gene91527:CDS |
TTGTTATTCCAATCTACATA+AGG | 0.465642 | 1.2:-60441189 | None:intergenic |
TTAAAATAAGATCAAGAAAG+AGG | 0.490885 | 1.2:+60442049 | MS.gene91527:CDS |
TGCCAGATTCTTACATCCAA+AGG | 0.505226 | 1.2:+60441469 | MS.gene91527:CDS |
GGTTGAAGATGATTGCAAGC+TGG | 0.507884 | 1.2:+60442295 | MS.gene91527:intron |
GCCAGATTCTTACATCCAAA+GGG | 0.516817 | 1.2:+60441470 | MS.gene91527:CDS |
TTAGTAATAGTATTACTACT+TGG | 0.517777 | 1.2:-60441267 | None:intergenic |
TGTTATGTGTTTACCTGAAG+AGG | 0.521964 | 1.2:+60440987 | None:intergenic |
ACACAGTTATTCGTCCGAAA+AGG | 0.534814 | 1.2:+60441325 | MS.gene91527:CDS |
GATCAAGCTTCTATAATTGG+AGG | 0.557225 | 1.2:+60441781 | MS.gene91527:CDS |
TGAACTTCATTCAAATGGGG+TGG | 0.566537 | 1.2:-60441228 | None:intergenic |
ATTACTACTTGGATCAGTAG+TGG | 0.576946 | 1.2:-60441256 | None:intergenic |
TTATCACTTGTTGAATACTG+TGG | 0.584055 | 1.2:-60441931 | None:intergenic |
GGTCAATAGGATTCAACAAG+AGG | 0.595940 | 1.2:+60442355 | MS.gene91527:CDS |
AGCTTCAGCTGTATACCAGA+TGG | 0.597796 | 1.2:+60442334 | MS.gene91527:CDS |
TATGTAGATTGGAATAACAA+TGG | 0.602597 | 1.2:+60441192 | MS.gene91527:CDS |
TGATTGCAAGCTGGGATCAG+TGG | 0.605953 | 1.2:+60442304 | MS.gene91527:CDS |
TTATTCCAATCTACATAAGG+AGG | 0.614549 | 1.2:-60441186 | None:intergenic |
TCTTGAACTTCATTCAAATG+GGG | 0.614700 | 1.2:-60441231 | None:intergenic |
ACGAATAACTGTGTTCACAG+AGG | 0.614740 | 1.2:-60441316 | None:intergenic |
CGAATAACTGTGTTCACAGA+GGG | 0.620805 | 1.2:-60441315 | None:intergenic |
AGACATGGCTCTAGAAGCAG+TGG | 0.621348 | 1.2:+60441026 | MS.gene91527:CDS |
AAGAGATAGAGTGAAAGACA+TGG | 0.647297 | 1.2:+60441011 | MS.gene91527:CDS |
GTGAAATCTGATGAAGCTGG+TGG | 0.684533 | 1.2:+60441871 | MS.gene91527:CDS |
TGCTGACATAGAAGTGACAA+TGG | 0.687267 | 1.2:+60442008 | MS.gene91527:CDS |
GAAGTGAAATCTGATGAAGC+TGG | 0.693568 | 1.2:+60441868 | MS.gene91527:CDS |
TGACATAGAAGTGACAATGG+TGG | 0.780182 | 1.2:+60442011 | MS.gene91527:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATGAAAAGAATTCAGAAAA+TGG | - | chr1.2:60441910-60441929 | None:intergenic | 20.0% |
!! | TTAAAATAAGATCAAGAAAG+AGG | + | chr1.2:60442049-60442068 | MS.gene91527:CDS | 20.0% |
!! | TTAGTAATAGTATTACTACT+TGG | - | chr1.2:60441270-60441289 | None:intergenic | 20.0% |
!!! | AGATTTCTTTGAACAATTTT+TGG | + | chr1.2:60442224-60442243 | MS.gene91527:intron | 20.0% |
!!! | ATCTTATTTTAAGATTTGCA+TGG | - | chr1.2:60442041-60442060 | None:intergenic | 20.0% |
! | CATTTAAATGTTACTACTAC+TGG | + | chr1.2:60442129-60442148 | MS.gene91527:CDS | 25.0% |
! | TATGTAGATTGGAATAACAA+TGG | + | chr1.2:60441192-60441211 | MS.gene91527:CDS | 25.0% |
! | TCTTTGATTCCATAACTAAA+AGG | - | chr1.2:60441072-60441091 | None:intergenic | 25.0% |
! | TTCTTGAACTTCATTCAAAT+GGG | - | chr1.2:60441235-60441254 | None:intergenic | 25.0% |
! | TTTCTTGAACTTCATTCAAA+TGG | - | chr1.2:60441236-60441255 | None:intergenic | 25.0% |
!! | TTGTTATTCCAATCTACATA+AGG | - | chr1.2:60441192-60441211 | None:intergenic | 25.0% |
!!! | GTGTTTGTTTTTTTTGTTGT+TGG | + | chr1.2:60441746-60441765 | MS.gene91527:intron | 25.0% |
TCTTGAACTTCATTCAAATG+GGG | - | chr1.2:60441234-60441253 | None:intergenic | 30.0% | |
TTATTCCAATCTACATAAGG+AGG | - | chr1.2:60441189-60441208 | None:intergenic | 30.0% | |
! | GAGGACAATTATTTTCTGTT+TGG | - | chr1.2:60441170-60441189 | None:intergenic | 30.0% |
! | TTATCACTTGTTGAATACTG+TGG | - | chr1.2:60441934-60441953 | None:intergenic | 30.0% |
!! | ACACAAGATCCTTTTAGTTA+TGG | + | chr1.2:60441060-60441079 | MS.gene91527:CDS | 30.0% |
AACATGCAGTTACATGTTCT+TGG | + | chr1.2:60441644-60441663 | MS.gene91527:intron | 35.0% | |
AAGAGATAGAGTGAAAGACA+TGG | + | chr1.2:60441011-60441030 | MS.gene91527:CDS | 35.0% | |
ATTACTACTTGGATCAGTAG+TGG | - | chr1.2:60441259-60441278 | None:intergenic | 35.0% | |
ATTGTCCTCCTTATGTAGAT+TGG | + | chr1.2:60441181-60441200 | MS.gene91527:CDS | 35.0% | |
CAGTGAGTTTAGTAGAATCA+CGG | + | chr1.2:60441539-60441558 | MS.gene91527:intron | 35.0% | |
CTAAAAGGATCTTGTGTTTG+TGG | - | chr1.2:60441057-60441076 | None:intergenic | 35.0% | |
GATCAAGCTTCTATAATTGG+AGG | + | chr1.2:60441781-60441800 | MS.gene91527:CDS | 35.0% | |
GCTACTATTGGTGAAAAAGT+TGG | + | chr1.2:60441967-60441986 | MS.gene91527:CDS | 35.0% | |
GGTGATCAAGCTTCTATAAT+TGG | + | chr1.2:60441778-60441797 | MS.gene91527:CDS | 35.0% | |
TCTAATTCTGCAGCTACTAT+TGG | + | chr1.2:60441955-60441974 | MS.gene91527:CDS | 35.0% | |
TCTTTACTCTCTCAGTGTTA+AGG | + | chr1.2:60442161-60442180 | MS.gene91527:CDS | 35.0% | |
TGTAAGTAGTAAGTACCCTT+TGG | - | chr1.2:60441488-60441507 | None:intergenic | 35.0% | |
! | AGCTCTGGTAATCTAAAGTT+CGG | - | chr1.2:60441680-60441699 | None:intergenic | 35.0% |
! | GAGCACAAGTTTCATTTTCT+TGG | + | chr1.2:60441829-60441848 | MS.gene91527:CDS | 35.0% |
!! | ACCATTTTCAAGAGCTGTTT+TGG | - | chr1.2:60442075-60442094 | None:intergenic | 35.0% |
!!! | TTTTGTTGTTGGTGAATGCA+GGG | + | chr1.2:60441757-60441776 | MS.gene91527:intron | 35.0% |
!!! | TTTTTGTTGTTGGTGAATGC+AGG | + | chr1.2:60441756-60441775 | MS.gene91527:intron | 35.0% |
ACACAGTTATTCGTCCGAAA+AGG | + | chr1.2:60441325-60441344 | MS.gene91527:CDS | 40.0% | |
ACCCTTTGGATGTAAGAATC+TGG | - | chr1.2:60441474-60441493 | None:intergenic | 40.0% | |
ACGAATAACTGTGTTCACAG+AGG | - | chr1.2:60441319-60441338 | None:intergenic | 40.0% | |
ACTCTATCTCTTTCCTCTTC+AGG | - | chr1.2:60441003-60441022 | None:intergenic | 40.0% | |
CAGCTCTTGAAAATGGTATC+TGG | + | chr1.2:60442078-60442097 | MS.gene91527:CDS | 40.0% | |
CGAATAACTGTGTTCACAGA+GGG | - | chr1.2:60441318-60441337 | None:intergenic | 40.0% | |
CTGTATACCAGATGGTCAAT+AGG | + | chr1.2:60442342-60442361 | MS.gene91527:CDS | 40.0% | |
GAAGTGAAATCTGATGAAGC+TGG | + | chr1.2:60441868-60441887 | MS.gene91527:CDS | 40.0% | |
GCCAAAACAGCTCTTGAAAA+TGG | + | chr1.2:60442071-60442090 | MS.gene91527:CDS | 40.0% | |
GCCAGATTCTTACATCCAAA+GGG | + | chr1.2:60441470-60441489 | MS.gene91527:CDS | 40.0% | |
GGTCAATAGGATTCAACAAG+AGG | + | chr1.2:60442355-60442374 | MS.gene91527:CDS | 40.0% | |
GTTGAAGATGATTGCAAGCT+GGG | + | chr1.2:60442296-60442315 | MS.gene91527:CDS | 40.0% | |
GTTGAATCCTATTGACCATC+TGG | - | chr1.2:60442352-60442371 | None:intergenic | 40.0% | |
TGAACTTCATTCAAATGGGG+TGG | - | chr1.2:60441231-60441250 | None:intergenic | 40.0% | |
TGACATAGAAGTGACAATGG+TGG | + | chr1.2:60442011-60442030 | MS.gene91527:CDS | 40.0% | |
TGCCAGATTCTTACATCCAA+AGG | + | chr1.2:60441469-60441488 | MS.gene91527:CDS | 40.0% | |
TGCTGACATAGAAGTGACAA+TGG | + | chr1.2:60442008-60442027 | MS.gene91527:CDS | 40.0% | |
! | CCCTCTAGTTTCTAGAAGAA+GGG | - | chr1.2:60441703-60441722 | None:intergenic | 40.0% |
! | CCCTTCTTCTAGAAACTAGA+GGG | + | chr1.2:60441700-60441719 | MS.gene91527:intron | 40.0% |
! | TCCCTTCTTCTAGAAACTAG+AGG | + | chr1.2:60441699-60441718 | MS.gene91527:intron | 40.0% |
AGCTTCAGCTGTATACCAGA+TGG | + | chr1.2:60442334-60442353 | MS.gene91527:CDS | 45.0% | |
CAAATGGGGTGGTGAAAAAG+TGG | - | chr1.2:60441220-60441239 | None:intergenic | 45.0% | |
GGTTGAAGATGATTGCAAGC+TGG | + | chr1.2:60442295-60442314 | MS.gene91527:intron | 45.0% | |
GTGAAATCTGATGAAGCTGG+TGG | + | chr1.2:60441871-60441890 | MS.gene91527:CDS | 45.0% | |
! | GCCCTCTAGTTTCTAGAAGA+AGG | - | chr1.2:60441704-60441723 | None:intergenic | 45.0% |
! | TTTCTAGAAGAAGGGAGCTC+TGG | - | chr1.2:60441695-60441714 | None:intergenic | 45.0% |
!!! | TGAATTTTTTTTTTTTATTT+AGG | + | chr1.2:60442274-60442293 | MS.gene91527:intron | 5.0% |
TGATTGCAAGCTGGGATCAG+TGG | + | chr1.2:60442304-60442323 | MS.gene91527:CDS | 50.0% | |
!! | AGACATGGCTCTAGAAGCAG+TGG | + | chr1.2:60441026-60441045 | MS.gene91527:CDS | 50.0% |
!!! | CTTCTAGCTCTGCGCCTTTT+CGG | - | chr1.2:60441342-60441361 | None:intergenic | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 60440991 | 60442391 | 60440991 | ID=MS.gene91527 |
chr1.2 | mRNA | 60440991 | 60442391 | 60440991 | ID=MS.gene91527.t1;Parent=MS.gene91527 |
chr1.2 | exon | 60440991 | 60441491 | 60440991 | ID=MS.gene91527.t1.exon1;Parent=MS.gene91527.t1 |
chr1.2 | CDS | 60440991 | 60441491 | 60440991 | ID=cds.MS.gene91527.t1;Parent=MS.gene91527.t1 |
chr1.2 | exon | 60441778 | 60442182 | 60441778 | ID=MS.gene91527.t1.exon2;Parent=MS.gene91527.t1 |
chr1.2 | CDS | 60441778 | 60442182 | 60441778 | ID=cds.MS.gene91527.t1;Parent=MS.gene91527.t1 |
chr1.2 | exon | 60442296 | 60442391 | 60442296 | ID=MS.gene91527.t1.exon3;Parent=MS.gene91527.t1 |
chr1.2 | CDS | 60442296 | 60442391 | 60442296 | ID=cds.MS.gene91527.t1;Parent=MS.gene91527.t1 |
Gene Sequence |
Protein sequence |