Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93859.t1 | XP_013469863.1 | 90.8 | 347 | 32 | 0 | 1 | 347 | 1 | 347 | 2.20E-176 | 628.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93859.t1 | Q5T280 | 47.0 | 300 | 153 | 4 | 49 | 344 | 74 | 371 | 1.1e-67 | 258.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93859.t1 | A0A072VQH5 | 90.8 | 347 | 32 | 0 | 1 | 347 | 1 | 347 | 1.6e-176 | 628.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene93859 | MS.gene033017 | PPI |
| MS.gene93859 | MS.gene067809 | PPI |
| MS.gene003501 | MS.gene93859 | PPI |
| MS.gene68979 | MS.gene93859 | PPI |
| MS.gene038800 | MS.gene93859 | PPI |
| MS.gene08205 | MS.gene93859 | PPI |
| MS.gene057730 | MS.gene93859 | PPI |
| MS.gene90954 | MS.gene93859 | PPI |
| MS.gene51868 | MS.gene93859 | PPI |
| MS.gene93859 | MS.gene044498 | PPI |
| MS.gene90957 | MS.gene93859 | PPI |
| MS.gene000714 | MS.gene93859 | PPI |
| MS.gene93859 | MS.gene52097 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93859.t1 | MTR_1g105065 | 95.677 | 347 | 15 | 0 | 1 | 347 | 1 | 347 | 0.0 | 667 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93859.t1 | AT5G19300 | 68.153 | 314 | 96 | 3 | 34 | 345 | 84 | 395 | 4.08e-155 | 441 |
Find 97 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAGCATTGCTCGGCTTAT+TGG | 0.172731 | 1.2:+77945930 | None:intergenic |
| TCATCGATGTTGCCATTTAT+TGG | 0.179774 | 1.2:+77951150 | None:intergenic |
| AGTTGATGTTGGCTTATTTA+AGG | 0.186095 | 1.2:-77949006 | MS.gene93859:intron |
| TGAGGAAGATGATAACTTTA+AGG | 0.223818 | 1.2:-77946649 | MS.gene93859:intron |
| CCATTTATTGGGTTTGGTTC+AGG | 0.241598 | 1.2:+77951162 | None:intergenic |
| GCCAACCGCAATTTGGATTA+TGG | 0.253118 | 1.2:-77948012 | MS.gene93859:intron |
| TTCTTCCGGGTTCAAGTATT+TGG | 0.255682 | 1.2:+77948055 | None:intergenic |
| CATCGATGTTGCCATTTATT+GGG | 0.278770 | 1.2:+77951151 | None:intergenic |
| CATGGGCGCCAACCGCAATT+TGG | 0.285952 | 1.2:-77948019 | MS.gene93859:CDS |
| TAGGGAAGAAGGAGCATATT+GGG | 0.306398 | 1.2:-77947658 | MS.gene93859:CDS |
| CCTGAACCAAACCCAATAAA+TGG | 0.310870 | 1.2:-77951162 | MS.gene93859:CDS |
| CCCACTCATGTTTGCGCAAA+TGG | 0.317819 | 1.2:+77950425 | None:intergenic |
| ACCAATAAGCCGAGCAATGC+TGG | 0.317878 | 1.2:-77945931 | MS.gene93859:CDS |
| GGCGACAGTAACTCTTCTTC+CGG | 0.318602 | 1.2:+77948041 | None:intergenic |
| AATAAAAGTAATACAGATAA+AGG | 0.356965 | 1.2:-77950710 | MS.gene93859:CDS |
| TTATTCCGCACCGGATAATT+CGG | 0.364342 | 1.2:-77950687 | MS.gene93859:CDS |
| TTTAAATACATGTCCACATC+AGG | 0.364943 | 1.2:-77946142 | MS.gene93859:CDS |
| AGACATTTATTGATTGCCTT+TGG | 0.377473 | 1.2:-77946699 | MS.gene93859:CDS |
| TGCTCCTTCTTCCCTAGGCT+TGG | 0.378296 | 1.2:+77947665 | None:intergenic |
| CTTTGGCGGATTGGCTGGTT+TGG | 0.380876 | 1.2:-77946682 | MS.gene93859:CDS |
| TTGCTCGGCTTATTGGTTCT+TGG | 0.394746 | 1.2:+77945937 | None:intergenic |
| GCATAACAGCTTAAGATTTG+TGG | 0.397795 | 1.2:-77950579 | MS.gene93859:intron |
| ATGTTGCCATTTATTGGGTT+TGG | 0.399709 | 1.2:+77951156 | None:intergenic |
| AGCTTGAAATACCATCCTTC+AGG | 0.412173 | 1.2:-77947400 | MS.gene93859:intron |
| CAATATGCTCCTTCTTCCCT+AGG | 0.415928 | 1.2:+77947660 | None:intergenic |
| GCGACAGTAACTCTTCTTCC+GGG | 0.421324 | 1.2:+77948042 | None:intergenic |
| TTGAGACACCTCAGTATTTG+AGG | 0.427188 | 1.2:-77950619 | MS.gene93859:CDS |
| CTAGGGAAGAAGGAGCATAT+TGG | 0.429341 | 1.2:-77947659 | MS.gene93859:CDS |
| ATTGCCTTTGGCGGATTGGC+TGG | 0.434730 | 1.2:-77946687 | MS.gene93859:CDS |
| ACATGAGTGGGGTCCGTATC+GGG | 0.438663 | 1.2:-77950413 | MS.gene93859:CDS |
| TATTGGGTTTGGTTCAGGTT+CGG | 0.453688 | 1.2:+77951167 | None:intergenic |
| CAAATTGCGGTTGGCGCCCA+TGG | 0.453787 | 1.2:+77948020 | None:intergenic |
| TTCGGATGATGAAAGTAGTT+CGG | 0.454347 | 1.2:-77950669 | MS.gene93859:CDS |
| ATTGATTGCCTTTGGCGGAT+TGG | 0.456827 | 1.2:-77946691 | MS.gene93859:CDS |
| AATCTTAAGCTGTTATGCAT+TGG | 0.463655 | 1.2:+77950584 | None:intergenic |
| CAACTCTTGAACTCGCTACT+CGG | 0.468723 | 1.2:-77951023 | MS.gene93859:CDS |
| CATTTATTGATTGCCTTTGG+CGG | 0.469674 | 1.2:-77946696 | MS.gene93859:CDS |
| CATTAGCAACCTCATTGATT+CGG | 0.476477 | 1.2:+77950850 | None:intergenic |
| CTTTCATCATCCGAATTATC+CGG | 0.480182 | 1.2:+77950677 | None:intergenic |
| AGTTGGAACGTTGTCAATGA+TGG | 0.483106 | 1.2:+77951041 | None:intergenic |
| ACCATAATCCAAATTGCGGT+TGG | 0.503863 | 1.2:+77948011 | None:intergenic |
| AACATGAGTGGGGTCCGTAT+CGG | 0.504197 | 1.2:-77950414 | MS.gene93859:CDS |
| AAGAAAGACATTCAAACTCC+GGG | 0.512731 | 1.2:-77949037 | MS.gene93859:CDS |
| TCATCCAAGCCTAGGGAAGA+AGG | 0.513329 | 1.2:-77947669 | MS.gene93859:CDS |
| AACATCAACTAGCGTTGCCC+CGG | 0.521910 | 1.2:+77949019 | None:intergenic |
| GAGGTGTCTCAAGGTACTGC+AGG | 0.529237 | 1.2:+77950630 | None:intergenic |
| AAAGAAAGACATTCAAACTC+CGG | 0.529826 | 1.2:-77949038 | MS.gene93859:CDS |
| GGGGCAACGCTAGTTGATGT+TGG | 0.530539 | 1.2:-77949017 | MS.gene93859:CDS |
| TTGTCTCATCATCCAAGCCT+AGG | 0.537203 | 1.2:-77947677 | MS.gene93859:CDS |
| CCATTTGCGCAAACATGAGT+GGG | 0.538873 | 1.2:-77950425 | MS.gene93859:CDS |
| AACTCTTGAACTCGCTACTC+GGG | 0.543550 | 1.2:-77951022 | MS.gene93859:intron |
| GCAAATGGTGTGGAGCATCA+AGG | 0.551811 | 1.2:+77950440 | None:intergenic |
| GATTACCATAATCCAAATTG+CGG | 0.555577 | 1.2:+77948007 | None:intergenic |
| CCAATAAGCCGAGCAATGCT+GGG | 0.556012 | 1.2:-77945930 | MS.gene93859:CDS |
| AAGAAGAGTTACTGTCGCCA+TGG | 0.560843 | 1.2:-77948037 | MS.gene93859:CDS |
| AACGTTGTCAATGATGGAAG+CGG | 0.563328 | 1.2:+77951047 | None:intergenic |
| AAAGACCTACCTTCCCGATA+CGG | 0.564821 | 1.2:+77950400 | None:intergenic |
| GGTGGCTATGATTGTATAGT+CGG | 0.570409 | 1.2:-77947458 | MS.gene93859:CDS |
| ATACTCAACCCAGCATTGCT+CGG | 0.573303 | 1.2:+77945922 | None:intergenic |
| CAAATGGTGTGGAGCATCAA+GGG | 0.574406 | 1.2:+77950441 | None:intergenic |
| ATTGTTCGACTCCCCTGATG+TGG | 0.576891 | 1.2:+77946129 | None:intergenic |
| ACGTTGTCAATGATGGAAGC+GGG | 0.580301 | 1.2:+77951048 | None:intergenic |
| AGAAGAGTTACTGTCGCCAT+GGG | 0.580848 | 1.2:-77948036 | MS.gene93859:CDS |
| GGGAACAGCTATGCTGACAG+TGG | 0.586260 | 1.2:+77951068 | None:intergenic |
| GAAGAAGCAGCGGCTGACAA+CGG | 0.589419 | 1.2:-77951199 | MS.gene93859:CDS |
| CGAGTAGCGAGTTCAAGAGT+TGG | 0.592023 | 1.2:+77951024 | None:intergenic |
| TGGTTTGGAAGAGAGTATTG+AGG | 0.599758 | 1.2:-77946667 | MS.gene93859:CDS |
| AGATAAAGGTTATTCCGCAC+CGG | 0.600115 | 1.2:-77950696 | MS.gene93859:CDS |
| TGTCTCATCATCCAAGCCTA+GGG | 0.600351 | 1.2:-77947676 | MS.gene93859:CDS |
| ACCATTTGCGCAAACATGAG+TGG | 0.600994 | 1.2:-77950426 | MS.gene93859:CDS |
| TCAAATACTGAGGTGTCTCA+AGG | 0.601277 | 1.2:+77950621 | None:intergenic |
| AAACATGAGCACCTGAAGGA+TGG | 0.601594 | 1.2:+77947389 | None:intergenic |
| GACACCTCAGTATTTGAGGA+AGG | 0.603915 | 1.2:-77950615 | MS.gene93859:CDS |
| GTACTGAAGAGATATAAGAA+TGG | 0.608526 | 1.2:+77945962 | None:intergenic |
| TTAAATACATGTCCACATCA+GGG | 0.610146 | 1.2:-77946141 | MS.gene93859:CDS |
| ATTTAATGAATGTACATACA+AGG | 0.623297 | 1.2:-77947598 | MS.gene93859:intron |
| TCATGTTTGCGCAAATGGTG+TGG | 0.628666 | 1.2:+77950430 | None:intergenic |
| GGAACAGCTATGCTGACAGT+GGG | 0.628924 | 1.2:+77951069 | None:intergenic |
| GATGATGAGACAACCTCGCG+TGG | 0.636166 | 1.2:+77947687 | None:intergenic |
| CAAACCAGCCAATCCGCCAA+AGG | 0.636167 | 1.2:+77946683 | None:intergenic |
| TCATCTAGATTTACCACGCG+AGG | 0.636923 | 1.2:-77947700 | MS.gene93859:intron |
| TAAATACATGTCCACATCAG+GGG | 0.639657 | 1.2:-77946140 | MS.gene93859:CDS |
| AAATGGTGTGGAGCATCAAG+GGG | 0.640817 | 1.2:+77950442 | None:intergenic |
| AGGGAAGAAGGAGCATATTG+GGG | 0.647186 | 1.2:-77947657 | MS.gene93859:CDS |
| ATCATCCGAATTATCCGGTG+CGG | 0.653728 | 1.2:+77950682 | None:intergenic |
| GAGTGGGGTCCGTATCGGGA+AGG | 0.653942 | 1.2:-77950409 | MS.gene93859:intron |
| ATAGTCGGTACCTCTGAGCA+TGG | 0.660543 | 1.2:-77947443 | MS.gene93859:CDS |
| TGGTGTGGAGCATCAAGGGG+TGG | 0.663049 | 1.2:+77950445 | None:intergenic |
| TGGGGAAGAAGAAGAAGCAG+CGG | 0.683363 | 1.2:-77951209 | MS.gene93859:CDS |
| TAAGAAGAACAAATCAAACA+AGG | 0.684805 | 1.2:-77951097 | MS.gene93859:CDS |
| AGAGCCTTCCTCAAATACTG+AGG | 0.688667 | 1.2:+77950611 | None:intergenic |
| GAGTCGAACAATTCGAACAG+AGG | 0.692468 | 1.2:-77946118 | MS.gene93859:intron |
| GTTGACCAAATACTTGAACC+CGG | 0.705221 | 1.2:-77948060 | MS.gene93859:CDS |
| ATTGATTCGGAAAATAGTCG+CGG | 0.716272 | 1.2:+77950863 | None:intergenic |
| AATAATCTGACCATGCTCAG+AGG | 0.716636 | 1.2:+77947433 | None:intergenic |
| AGAAAGACATTCAAACTCCG+GGG | 0.724344 | 1.2:-77949036 | MS.gene93859:CDS |
| CATTTGCGCAAACATGAGTG+GGG | 0.732835 | 1.2:-77950424 | MS.gene93859:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAAATAAAACTTAAAA+AGG | + | chr1.2:77950285-77950304 | None:intergenic | 10.0% |
| !! | AAGTAAAAAAAGTAAAAAAT+TGG | + | chr1.2:77948187-77948206 | None:intergenic | 10.0% |
| !!! | GATTCATTTTTTTTTTTTTA+GGG | + | chr1.2:77951130-77951149 | None:intergenic | 10.0% |
| !! | AAATACAAAGAGAATTTAAA+GGG | + | chr1.2:77948210-77948229 | None:intergenic | 15.0% |
| !! | AATAAAAGTAATACAGATAA+AGG | - | chr1.2:77946426-77946445 | MS.gene93859:intron | 15.0% |
| !! | ATTATTATTGTTAAATTGCT+TGG | - | chr1.2:77949788-77949807 | MS.gene93859:intron | 15.0% |
| !! | TAATAATGTTACTATTAACT+AGG | - | chr1.2:77948998-77949017 | MS.gene93859:intron | 15.0% |
| !! | TTATTATTGTTAAATTGCTT+GGG | - | chr1.2:77949789-77949808 | MS.gene93859:intron | 15.0% |
| !!! | AATGAAAGTAATTTTGAAAT+GGG | + | chr1.2:77946142-77946161 | None:intergenic | 15.0% |
| !!! | GGATTCATTTTTTTTTTTTT+AGG | + | chr1.2:77951131-77951150 | None:intergenic | 15.0% |
| !!! | TAAAATTAACGTTTTTGTTA+TGG | + | chr1.2:77946166-77946185 | None:intergenic | 15.0% |
| !!! | TAATTTATAATTTTATGCTC+AGG | - | chr1.2:77946902-77946921 | MS.gene93859:intron | 15.0% |
| !!! | TATATTCTATTTTTCTTGTT+AGG | - | chr1.2:77947056-77947075 | MS.gene93859:intron | 15.0% |
| !! | AAAAATGTAAAGGAAATTCA+TGG | - | chr1.2:77946795-77946814 | MS.gene93859:intron | 20.0% |
| !! | AAAATTTATATTTAGCACCA+TGG | + | chr1.2:77950906-77950925 | None:intergenic | 20.0% |
| !! | AAAGAAAACTTCAAAATCAT+AGG | + | chr1.2:77949294-77949313 | None:intergenic | 20.0% |
| !! | AAATTATCAGTACTAATCAT+TGG | + | chr1.2:77946888-77946907 | None:intergenic | 20.0% |
| !! | AACATTATTAGAACAAAATC+TGG | + | chr1.2:77948988-77949007 | None:intergenic | 20.0% |
| !! | ATAGATTAATAGGAAAACAA+TGG | + | chr1.2:77949894-77949913 | None:intergenic | 20.0% |
| !! | ATATATTTCAAAACTTTCCA+TGG | + | chr1.2:77947096-77947115 | None:intergenic | 20.0% |
| !! | ATATTAGAATATTCTTGAAC+AGG | - | chr1.2:77948645-77948664 | MS.gene93859:intron | 20.0% |
| !! | ATCTAAATCACAATATAACA+AGG | + | chr1.2:77946978-77946997 | None:intergenic | 20.0% |
| !! | ATTTAATGAATGTACATACA+AGG | - | chr1.2:77949538-77949557 | MS.gene93859:intron | 20.0% |
| !! | ATTTATAGATTATTAGAGTG+TGG | - | chr1.2:77948468-77948487 | MS.gene93859:intron | 20.0% |
| !! | CAAATTAAAATCGAAGAAAA+GGG | + | chr1.2:77948419-77948438 | None:intergenic | 20.0% |
| !! | CATTATATATGTGATTATTG+CGG | - | chr1.2:77950523-77950542 | MS.gene93859:intron | 20.0% |
| !! | CGAAAAGAAAATAGATTAAT+AGG | + | chr1.2:77949904-77949923 | None:intergenic | 20.0% |
| !! | GAAATACAAAGAGAATTTAA+AGG | + | chr1.2:77948211-77948230 | None:intergenic | 20.0% |
| !! | TCAAATTAAAATCGAAGAAA+AGG | + | chr1.2:77948420-77948439 | None:intergenic | 20.0% |
| !! | TCTAAATCACAATATAACAA+GGG | + | chr1.2:77946977-77946996 | None:intergenic | 20.0% |
| !! | TGAACAAGTTTATTAATTCT+GGG | - | chr1.2:77949850-77949869 | MS.gene93859:intron | 20.0% |
| !! | TTATTTATGTGTGTATGAAT+AGG | - | chr1.2:77946389-77946408 | MS.gene93859:intron | 20.0% |
| !! | TTGAACAAGTTTATTAATTC+TGG | - | chr1.2:77949849-77949868 | MS.gene93859:intron | 20.0% |
| !!! | AAATCTGGAATAAATTCATT+TGG | - | chr1.2:77947530-77947549 | MS.gene93859:intron | 20.0% |
| !!! | ATGATTTTGAAGTTTTCTTT+TGG | - | chr1.2:77949294-77949313 | MS.gene93859:intron | 20.0% |
| !!! | ATGGAAAGTTTTGAAATATA+TGG | - | chr1.2:77947095-77947114 | MS.gene93859:intron | 20.0% |
| !!! | CAATGAAAGTAATTTTGAAA+TGG | + | chr1.2:77946143-77946162 | None:intergenic | 20.0% |
| !!! | CAGCAATTTTTTTTTAAACT+CGG | + | chr1.2:77948897-77948916 | None:intergenic | 20.0% |
| !!! | TGATTTTGAAGTTTTCTTTT+GGG | - | chr1.2:77949295-77949314 | MS.gene93859:intron | 20.0% |
| !!! | TTTTTTAGGGAAAAAATATG+AGG | + | chr1.2:77951117-77951136 | None:intergenic | 20.0% |
| ! | AAAAAATGCCAAATTGAAAG+AGG | + | chr1.2:77949238-77949257 | None:intergenic | 25.0% |
| ! | AAATGAGTTTATGGAAACTT+TGG | - | chr1.2:77947739-77947758 | MS.gene93859:intron | 25.0% |
| ! | AAATTCATTTGGTTGAAAGT+TGG | - | chr1.2:77947541-77947560 | MS.gene93859:intron | 25.0% |
| ! | AAATTTATGGAATCTCTGAT+TGG | + | chr1.2:77950564-77950583 | None:intergenic | 25.0% |
| ! | AACAGTAAATGAAACTATAG+TGG | - | chr1.2:77948692-77948711 | MS.gene93859:intron | 25.0% |
| ! | AAGGAAAATGTAAGAGAAAT+AGG | + | chr1.2:77948396-77948415 | None:intergenic | 25.0% |
| ! | AAGGGAAATGAAAAAGAAAA+AGG | + | chr1.2:77948233-77948252 | None:intergenic | 25.0% |
| ! | AATAAATTAATCATCGCAAC+TGG | + | chr1.2:77947777-77947796 | None:intergenic | 25.0% |
| ! | AATAGGCTATGGATATTAAA+AGG | + | chr1.2:77949595-77949614 | None:intergenic | 25.0% |
| ! | AATTCTAAATAGTGTAGGTT+TGG | + | chr1.2:77950688-77950707 | None:intergenic | 25.0% |
| ! | ACATGAGATTAAAGTTATCA+GGG | - | chr1.2:77950009-77950028 | MS.gene93859:intron | 25.0% |
| ! | ACTTGAATTCTAAATAGTGT+AGG | + | chr1.2:77950693-77950712 | None:intergenic | 25.0% |
| ! | AGAAAGGAAAAAGATTAAAC+CGG | + | chr1.2:77947885-77947904 | None:intergenic | 25.0% |
| ! | AGAATATACGAAAACAATAC+TGG | + | chr1.2:77947044-77947063 | None:intergenic | 25.0% |
| ! | AGAATTTCTAATTTCTGTAG+TGG | - | chr1.2:77946769-77946788 | MS.gene93859:intron | 25.0% |
| ! | ATAAAACTACAATGCTATAG+AGG | - | chr1.2:77947233-77947252 | MS.gene93859:intron | 25.0% |
| ! | ATACATTTCACAAGATTTCT+TGG | - | chr1.2:77948160-77948179 | MS.gene93859:intron | 25.0% |
| ! | ATATTGTCATTGTGTTATCA+AGG | + | chr1.2:77949323-77949342 | None:intergenic | 25.0% |
| ! | ATCAGTTGCATTATAATGTT+TGG | + | chr1.2:77950249-77950268 | None:intergenic | 25.0% |
| ! | ATTCAGCTTAAGAAAAAGAA+AGG | - | chr1.2:77950879-77950898 | MS.gene93859:CDS | 25.0% |
| ! | CATAAATTTGACAGAATCAT+CGG | - | chr1.2:77950575-77950594 | MS.gene93859:intron | 25.0% |
| ! | CATGTAAAAGATATGAAATC+TGG | - | chr1.2:77947515-77947534 | MS.gene93859:intron | 25.0% |
| ! | CATTGCAATAATAACTTCTT+AGG | - | chr1.2:77948065-77948084 | MS.gene93859:CDS | 25.0% |
| ! | CGAGTTTAAAAAAAAATTGC+TGG | - | chr1.2:77948895-77948914 | MS.gene93859:intron | 25.0% |
| ! | CGCAATAATCACATATATAA+TGG | + | chr1.2:77950525-77950544 | None:intergenic | 25.0% |
| ! | CTAAATCACAATATAACAAG+GGG | + | chr1.2:77946976-77946995 | None:intergenic | 25.0% |
| ! | GGAAGAATGATTTAAATTCT+GGG | - | chr1.2:77946816-77946835 | MS.gene93859:intron | 25.0% |
| ! | GTTTAGTATGTGTTTAATGT+TGG | - | chr1.2:77946637-77946656 | MS.gene93859:intron | 25.0% |
| ! | TAAGAAGAACAAATCAAACA+AGG | - | chr1.2:77946039-77946058 | MS.gene93859:intron | 25.0% |
| ! | TACATTTCACAAGATTTCTT+GGG | - | chr1.2:77948161-77948180 | MS.gene93859:intron | 25.0% |
| ! | TCCTATAAAAGAAAAACATG+AGG | + | chr1.2:77951152-77951171 | None:intergenic | 25.0% |
| ! | TGACAAGTAAACAAAAGAAA+GGG | + | chr1.2:77949649-77949668 | None:intergenic | 25.0% |
| ! | TGGAAGAATGATTTAAATTC+TGG | - | chr1.2:77946815-77946834 | MS.gene93859:intron | 25.0% |
| ! | TTGACAAGTAAACAAAAGAA+AGG | + | chr1.2:77949650-77949669 | None:intergenic | 25.0% |
| !! | AAATATATATGTGATGATGC+AGG | - | chr1.2:77950365-77950384 | MS.gene93859:intron | 25.0% |
| !! | AATTTTCATGTCAGTTTGAT+AGG | + | chr1.2:77947208-77947227 | None:intergenic | 25.0% |
| !! | TCATGTTTTTCTTTTATAGG+AGG | - | chr1.2:77951151-77951170 | MS.gene93859:CDS | 25.0% |
| !! | TCCTCATGTTTTTCTTTTAT+AGG | - | chr1.2:77951148-77951167 | MS.gene93859:CDS | 25.0% |
| !! | TTAATGTTGGTTGTTTGTAT+TGG | - | chr1.2:77946650-77946669 | MS.gene93859:CDS | 25.0% |
| !!! | ATGGAAAGAAGTTATTTTGA+AGG | - | chr1.2:77947663-77947682 | MS.gene93859:CDS | 25.0% |
| !!! | GCAGGTGTTTTTATTTAAAT+TGG | - | chr1.2:77950383-77950402 | MS.gene93859:intron | 25.0% |
| !!! | TCTATAGCATTGTAGTTTTA+TGG | + | chr1.2:77947234-77947253 | None:intergenic | 25.0% |
| !!! | TGGAAAGAAGTTATTTTGAA+GGG | - | chr1.2:77947664-77947683 | MS.gene93859:CDS | 25.0% |
| !!! | TTTTTTTTAAACTCGGTATC+TGG | + | chr1.2:77948890-77948909 | None:intergenic | 25.0% |
| AAAGAAAGACATTCAAACTC+CGG | - | chr1.2:77948098-77948117 | MS.gene93859:intron | 30.0% | |
| AATAGTAGCATATAGAAAGC+GGG | - | chr1.2:77948942-77948961 | MS.gene93859:intron | 30.0% | |
| AATCTTAAGCTGTTATGCAT+TGG | + | chr1.2:77946555-77946574 | None:intergenic | 30.0% | |
| AATGAACAGTGTTATCGAAT+CGG | - | chr1.2:77947265-77947284 | MS.gene93859:intron | 30.0% | |
| ACTAGAAAGCAGAAATTCTT+GGG | - | chr1.2:77948732-77948751 | MS.gene93859:intron | 30.0% | |
| ACTATGCAACTGAATAACTA+TGG | - | chr1.2:77948587-77948606 | MS.gene93859:intron | 30.0% | |
| AGAATATTCTTGAACAGGTT+AGG | - | chr1.2:77948650-77948669 | MS.gene93859:intron | 30.0% | |
| AGGTTGTCATTGAAAAAACA+AGG | + | chr1.2:77948252-77948271 | None:intergenic | 30.0% | |
| ATAATAAGATGTCCTTGAGA+AGG | + | chr1.2:77948272-77948291 | None:intergenic | 30.0% | |
| ATGATAGGAAAAACACTTGT+GGG | + | chr1.2:77950139-77950158 | None:intergenic | 30.0% | |
| ATTTGGTTGAAAGTTGGAAT+CGG | - | chr1.2:77947547-77947566 | MS.gene93859:intron | 30.0% | |
| CAATAGTAGCATATAGAAAG+CGG | - | chr1.2:77948941-77948960 | MS.gene93859:intron | 30.0% | |
| CAATGTGTGGTTCAAATTAA+CGG | + | chr1.2:77947149-77947168 | None:intergenic | 30.0% | |
| CACATGAGATTAAAGTTATC+AGG | - | chr1.2:77950008-77950027 | MS.gene93859:intron | 30.0% | |
| CATGAGATTAAAGTTATCAG+GGG | - | chr1.2:77950010-77950029 | MS.gene93859:intron | 30.0% | |
| CCATAAACTCATTTAGAGAA+AGG | + | chr1.2:77947733-77947752 | None:intergenic | 30.0% | |
| CCTTTCTCTAAATGAGTTTA+TGG | - | chr1.2:77947730-77947749 | MS.gene93859:intron | 30.0% | |
| CGATGATTCTGTCAAATTTA+TGG | + | chr1.2:77950577-77950596 | None:intergenic | 30.0% | |
| CTTAATAACGAAATCATGAC+TGG | - | chr1.2:77947579-77947598 | MS.gene93859:intron | 30.0% | |
| GAAAGGAAAAAGATTAAACC+GGG | + | chr1.2:77947884-77947903 | None:intergenic | 30.0% | |
| GATTACCATAATCCAAATTG+CGG | + | chr1.2:77949132-77949151 | None:intergenic | 30.0% | |
| GATTTAGATCTAATCGATGA+TGG | - | chr1.2:77946989-77947008 | MS.gene93859:intron | 30.0% | |
| GGTGAGAAAATCAAATCAAA+TGG | - | chr1.2:77947644-77947663 | MS.gene93859:CDS | 30.0% | |
| GGTTGTCATTGAAAAAACAA+GGG | + | chr1.2:77948251-77948270 | None:intergenic | 30.0% | |
| GTACTGAAGAGATATAAGAA+TGG | + | chr1.2:77951177-77951196 | None:intergenic | 30.0% | |
| GTATAGTGAATCAGATCATA+TGG | + | chr1.2:77949037-77949056 | None:intergenic | 30.0% | |
| TAAATAGTGTAGGTTTGGAT+TGG | + | chr1.2:77950683-77950702 | None:intergenic | 30.0% | |
| TATAATGCAACTGATGCATA+GGG | - | chr1.2:77950254-77950273 | MS.gene93859:intron | 30.0% | |
| TATGATAGGAAAAACACTTG+TGG | + | chr1.2:77950140-77950159 | None:intergenic | 30.0% | |
| TATTGCAATGTATCAAAACC+TGG | + | chr1.2:77948055-77948074 | None:intergenic | 30.0% | |
| TGAAAACATGTGTCTTTCTA+AGG | - | chr1.2:77950814-77950833 | MS.gene93859:intron | 30.0% | |
| TGAATATTGATGCCAAACTA+CGG | - | chr1.2:77949967-77949986 | MS.gene93859:intron | 30.0% | |
| TGAGGAAGATGATAACTTTA+AGG | - | chr1.2:77950487-77950506 | MS.gene93859:intron | 30.0% | |
| TGTTTGTATTGGAATTTGCA+GGG | - | chr1.2:77946661-77946680 | MS.gene93859:CDS | 30.0% | |
| TTAAAATCGAAGAAAAGGGA+AGG | + | chr1.2:77948415-77948434 | None:intergenic | 30.0% | |
| TTAAATACATGTCCACATCA+GGG | - | chr1.2:77950995-77951014 | MS.gene93859:intron | 30.0% | |
| TTAAGAAAAAGAAAGGACCA+TGG | - | chr1.2:77950886-77950905 | MS.gene93859:CDS | 30.0% | |
| TTATAATGCAACTGATGCAT+AGG | - | chr1.2:77950253-77950272 | MS.gene93859:intron | 30.0% | |
| TTGTTTGTATTGGAATTTGC+AGG | - | chr1.2:77946660-77946679 | MS.gene93859:CDS | 30.0% | |
| TTTAAATACATGTCCACATC+AGG | - | chr1.2:77950994-77951013 | MS.gene93859:intron | 30.0% | |
| TTTAACTGGAAGTTCAATGA+GGG | - | chr1.2:77948345-77948364 | MS.gene93859:intron | 30.0% | |
| TTTAATCTCATGTGAACTCT+TGG | + | chr1.2:77950002-77950021 | None:intergenic | 30.0% | |
| TTTATGTGTGTATGAATAGG+TGG | - | chr1.2:77946392-77946411 | MS.gene93859:intron | 30.0% | |
| ! | AGACATTTATTGATTGCCTT+TGG | - | chr1.2:77950437-77950456 | MS.gene93859:CDS | 30.0% |
| ! | AGTTTATTAATTCTGGGAGA+TGG | - | chr1.2:77949856-77949875 | MS.gene93859:intron | 30.0% |
| !! | AACTTTGCTCTAGCTTTAAA+TGG | - | chr1.2:77948810-77948829 | MS.gene93859:intron | 30.0% |
| !! | ACTTTGCTCTAGCTTTAAAT+GGG | - | chr1.2:77948811-77948830 | MS.gene93859:intron | 30.0% |
| !! | AGCATGCTTTTCTTTTTCAT+TGG | - | chr1.2:77949200-77949219 | MS.gene93859:intron | 30.0% |
| !! | AGTTGATGTTGGCTTATTTA+AGG | - | chr1.2:77948130-77948149 | MS.gene93859:intron | 30.0% |
| !! | GTAGTGGATGAAAAATGTAA+AGG | - | chr1.2:77946785-77946804 | MS.gene93859:intron | 30.0% |
| !! | TTTTAACTGGAAGTTCAATG+AGG | - | chr1.2:77948344-77948363 | MS.gene93859:intron | 30.0% |
| !! | TTTTCCCTGCATTTTTTAGA+GGG | + | chr1.2:77950948-77950967 | None:intergenic | 30.0% |
| !! | TTTTTCCCTGCATTTTTTAG+AGG | + | chr1.2:77950949-77950968 | None:intergenic | 30.0% |
| !!! | AAAGAAGTTATTTTGAAGGG+AGG | - | chr1.2:77947667-77947686 | MS.gene93859:CDS | 30.0% |
| !!! | TTTGGATATTGGCTTTTAAC+TGG | - | chr1.2:77948331-77948350 | MS.gene93859:intron | 30.0% |
| AACAGCTTAAGATTTGTGGT+TGG | - | chr1.2:77946561-77946580 | MS.gene93859:intron | 35.0% | |
| AAGAAAGACATTCAAACTCC+GGG | - | chr1.2:77948099-77948118 | MS.gene93859:intron | 35.0% | |
| AATGCAGGGAAAAAATGCAA+AGG | - | chr1.2:77950955-77950974 | MS.gene93859:intron | 35.0% | |
| ACTTCTCCTCTAGTATTCTT+AGG | + | chr1.2:77947697-77947716 | None:intergenic | 35.0% | |
| AGCATAAATTCATGTAGCCA+AGG | + | chr1.2:77949398-77949417 | None:intergenic | 35.0% | |
| AGTACATGATATTGAGCCAT+TGG | + | chr1.2:77950036-77950055 | None:intergenic | 35.0% | |
| ATACGCTTCCTCTTTCAATT+TGG | - | chr1.2:77949227-77949246 | MS.gene93859:intron | 35.0% | |
| ATTGCTGGAAACAGAAATTC+AGG | - | chr1.2:77948910-77948929 | MS.gene93859:intron | 35.0% | |
| ATTGGCAAATGTTTAGCTGA+TGG | + | chr1.2:77946870-77946889 | None:intergenic | 35.0% | |
| CACTAGAAAGCAGAAATTCT+TGG | - | chr1.2:77948731-77948750 | MS.gene93859:intron | 35.0% | |
| CCAATATCCAAACAACTACA+TGG | + | chr1.2:77948323-77948342 | None:intergenic | 35.0% | |
| CCATGTAGTTGTTTGGATAT+TGG | - | chr1.2:77948320-77948339 | MS.gene93859:intron | 35.0% | |
| CTTTCATCATCCGAATTATC+CGG | + | chr1.2:77946462-77946481 | None:intergenic | 35.0% | |
| GCATAACAGCTTAAGATTTG+TGG | - | chr1.2:77946557-77946576 | MS.gene93859:intron | 35.0% | |
| GGAAAACCTAAGAATACTAG+AGG | - | chr1.2:77947688-77947707 | MS.gene93859:CDS | 35.0% | |
| GTGTTACACATTTCTGTGTA+AGG | - | chr1.2:77950711-77950730 | MS.gene93859:CDS | 35.0% | |
| GTTAGCAAGCTCATTATGAT+AGG | + | chr1.2:77950154-77950173 | None:intergenic | 35.0% | |
| GTTTACTTGTCAACGTTACA+GGG | - | chr1.2:77949657-77949676 | MS.gene93859:intron | 35.0% | |
| GTTTGTATTGGAATTTGCAG+GGG | - | chr1.2:77946662-77946681 | MS.gene93859:CDS | 35.0% | |
| TAAATACATGTCCACATCAG+GGG | - | chr1.2:77950996-77951015 | MS.gene93859:intron | 35.0% | |
| TAACCAACACAATGAACACT+TGG | + | chr1.2:77947915-77947934 | None:intergenic | 35.0% | |
| TACAGTGGTCGATGAATAAT+AGG | + | chr1.2:77949612-77949631 | None:intergenic | 35.0% | |
| TCTCATACGAAAACATGTCT+TGG | - | chr1.2:77950779-77950798 | MS.gene93859:intron | 35.0% | |
| TGAGAACAGAAAATTCACAC+TGG | + | chr1.2:77950090-77950109 | None:intergenic | 35.0% | |
| TGTTTACTTGTCAACGTTAC+AGG | - | chr1.2:77949656-77949675 | MS.gene93859:intron | 35.0% | |
| TTCATTAGCACTGTTGTCTA+TGG | + | chr1.2:77947444-77947463 | None:intergenic | 35.0% | |
| TTCATTCCAGAATTTCTCCT+TGG | - | chr1.2:77949378-77949397 | MS.gene93859:intron | 35.0% | |
| TTCGGATGATGAAAGTAGTT+CGG | - | chr1.2:77946467-77946486 | MS.gene93859:intron | 35.0% | |
| TTGGCAAATGTTTAGCTGAT+GGG | + | chr1.2:77946869-77946888 | None:intergenic | 35.0% | |
| TTTCAATGACAACCTTCTCA+AGG | - | chr1.2:77948257-77948276 | MS.gene93859:intron | 35.0% | |
| ! | AATCACCCTCTAAAAAATGC+AGG | - | chr1.2:77950940-77950959 | MS.gene93859:intron | 35.0% |
| ! | ATCACCCTCTAAAAAATGCA+GGG | - | chr1.2:77950941-77950960 | MS.gene93859:intron | 35.0% |
| ! | ATGAGTGGAAAGTATAGCAT+TGG | - | chr1.2:77950111-77950130 | MS.gene93859:intron | 35.0% |
| ! | ATGTTGCCATTTATTGGGTT+TGG | + | chr1.2:77945983-77946002 | None:intergenic | 35.0% |
| ! | ATTTTCTGTTCTCACATGAG+TGG | - | chr1.2:77950096-77950115 | MS.gene93859:intron | 35.0% |
| ! | CATCGATGTTGCCATTTATT+GGG | + | chr1.2:77945988-77946007 | None:intergenic | 35.0% |
| ! | CATTAGCAACCTCATTGATT+CGG | + | chr1.2:77946289-77946308 | None:intergenic | 35.0% |
| ! | CATTTATTGATTGCCTTTGG+CGG | - | chr1.2:77950440-77950459 | MS.gene93859:CDS | 35.0% |
| ! | GACTATTTTCCGAATCAATG+AGG | - | chr1.2:77946277-77946296 | MS.gene93859:intron | 35.0% |
| ! | TCATCGATGTTGCCATTTAT+TGG | + | chr1.2:77945989-77946008 | None:intergenic | 35.0% |
| ! | TGAGTGGAAAGTATAGCATT+GGG | - | chr1.2:77950112-77950131 | MS.gene93859:intron | 35.0% |
| !! | AACACTTGGTGTGTTAAGAA+AGG | + | chr1.2:77947901-77947920 | None:intergenic | 35.0% |
| !! | ATTGATTCGGAAAATAGTCG+CGG | + | chr1.2:77946276-77946295 | None:intergenic | 35.0% |
| !!! | AATCGGTGGCAGTTTTTTTT+TGG | - | chr1.2:77947298-77947317 | MS.gene93859:intron | 35.0% |
| !!! | ATCGGTGGCAGTTTTTTTTT+GGG | - | chr1.2:77947299-77947318 | MS.gene93859:intron | 35.0% |
| !!! | GTGTTTTGAGTTTCACTTAC+TGG | - | chr1.2:77950316-77950335 | MS.gene93859:intron | 35.0% |
| !!! | GTTGTCGACTTTTATTGTGT+TGG | - | chr1.2:77947840-77947859 | MS.gene93859:intron | 35.0% |
| !!! | TTTTGATTTCCCTTTTCAGC+TGG | - | chr1.2:77946232-77946251 | MS.gene93859:intron | 35.0% |
| AAAAGAAAGGGTTCGTGAGT+AGG | + | chr1.2:77949637-77949656 | None:intergenic | 40.0% | |
| AACGGACATTAAACACTCCA+TGG | + | chr1.2:77947131-77947150 | None:intergenic | 40.0% | |
| AATAATCTGACCATGCTCAG+AGG | + | chr1.2:77949706-77949725 | None:intergenic | 40.0% | |
| ACACCAAGTGTTCATTGTGT+TGG | - | chr1.2:77947909-77947928 | MS.gene93859:intron | 40.0% | |
| ACCATAATCCAAATTGCGGT+TGG | + | chr1.2:77949128-77949147 | None:intergenic | 40.0% | |
| AGAAAATGAGGAGGGAAAAG+GGG | + | chr1.2:77950202-77950221 | None:intergenic | 40.0% | |
| AGAAAGACATTCAAACTCCG+GGG | - | chr1.2:77948100-77948119 | MS.gene93859:intron | 40.0% | |
| AGAGAAAATGAGGAGGGAAA+AGG | + | chr1.2:77950204-77950223 | None:intergenic | 40.0% | |
| AGATAAAGGTTATTCCGCAC+CGG | - | chr1.2:77946440-77946459 | MS.gene93859:intron | 40.0% | |
| AGCTAGAGCAAAGTTCCATA+TGG | + | chr1.2:77948805-77948824 | None:intergenic | 40.0% | |
| AGCTTGAAATACCATCCTTC+AGG | - | chr1.2:77949736-77949755 | MS.gene93859:intron | 40.0% | |
| AGGAAAAAGATTAAACCGGG+TGG | + | chr1.2:77947881-77947900 | None:intergenic | 40.0% | |
| AGTTGGAACGTTGTCAATGA+TGG | + | chr1.2:77946098-77946117 | None:intergenic | 40.0% | |
| ATCTGTGTGTGTTGGAAGTA+AGG | - | chr1.2:77947617-77947636 | MS.gene93859:CDS | 40.0% | |
| ATGTAGCCAAGGAGAAATTC+TGG | + | chr1.2:77949387-77949406 | None:intergenic | 40.0% | |
| ATTAGCACTGTTGTCTATGG+CGG | + | chr1.2:77947441-77947460 | None:intergenic | 40.0% | |
| CCTGAACCAAACCCAATAAA+TGG | - | chr1.2:77945974-77945993 | MS.gene93859:intron | 40.0% | |
| CTAAGCTTATCTGTGTGTGT+TGG | - | chr1.2:77947609-77947628 | MS.gene93859:CDS | 40.0% | |
| GAACAGAAAATTCACACTGG+AGG | + | chr1.2:77950087-77950106 | None:intergenic | 40.0% | |
| GAATGTGTTGCAACAGAGAA+AGG | + | chr1.2:77950608-77950627 | None:intergenic | 40.0% | |
| GAATGTTCGACAGTGAGTAT+AGG | - | chr1.2:77947461-77947480 | MS.gene93859:CDS | 40.0% | |
| GAGAAAATGAGGAGGGAAAA+GGG | + | chr1.2:77950203-77950222 | None:intergenic | 40.0% | |
| GGTCGATGAATAATAGGCTA+TGG | + | chr1.2:77949606-77949625 | None:intergenic | 40.0% | |
| GGTGGCTATGATTGTATAGT+CGG | - | chr1.2:77949678-77949697 | MS.gene93859:intron | 40.0% | |
| GGTTCATAGATCGACTAATC+CGG | + | chr1.2:77948869-77948888 | None:intergenic | 40.0% | |
| GTTAAAACATGAGCACCTGA+AGG | + | chr1.2:77949754-77949773 | None:intergenic | 40.0% | |
| GTTGACCAAATACTTGAACC+CGG | - | chr1.2:77949076-77949095 | MS.gene93859:intron | 40.0% | |
| TGGCAAATGTTTAGCTGATG+GGG | + | chr1.2:77946868-77946887 | None:intergenic | 40.0% | |
| TTAAAGTTATCAGGGGCCAA+TGG | - | chr1.2:77950017-77950036 | MS.gene93859:intron | 40.0% | |
| TTATTCCGCACCGGATAATT+CGG | - | chr1.2:77946449-77946468 | MS.gene93859:intron | 40.0% | |
| TTCTTCCGGGTTCAAGTATT+TGG | + | chr1.2:77949084-77949103 | None:intergenic | 40.0% | |
| TTGAGACACCTCAGTATTTG+AGG | - | chr1.2:77946517-77946536 | MS.gene93859:intron | 40.0% | |
| TTTAAGCGTTCTCTCTACGT+TGG | - | chr1.2:77949819-77949838 | MS.gene93859:intron | 40.0% | |
| ! | AACGTTGTCAATGATGGAAG+CGG | + | chr1.2:77946092-77946111 | None:intergenic | 40.0% |
| ! | ATTTGACTAGCCAGCTGAAA+AGG | + | chr1.2:77946245-77946264 | None:intergenic | 40.0% |
| ! | CCATTTATTGGGTTTGGTTC+AGG | + | chr1.2:77945977-77945996 | None:intergenic | 40.0% |
| ! | TAGGGAAGAAGGAGCATATT+GGG | - | chr1.2:77949478-77949497 | MS.gene93859:intron | 40.0% |
| ! | TATTAGTCACCCCAGCTTTT+GGG | - | chr1.2:77947793-77947812 | MS.gene93859:intron | 40.0% |
| ! | TATTGGGTTTGGTTCAGGTT+CGG | + | chr1.2:77945972-77945991 | None:intergenic | 40.0% |
| ! | TCAAATACTGAGGTGTCTCA+AGG | + | chr1.2:77946518-77946537 | None:intergenic | 40.0% |
| ! | TTATTAGTCACCCCAGCTTT+TGG | - | chr1.2:77947792-77947811 | MS.gene93859:intron | 40.0% |
| ! | TTTGACTAGCCAGCTGAAAA+GGG | + | chr1.2:77946244-77946263 | None:intergenic | 40.0% |
| !! | ATGAGCTTGCTAACAAGCAA+AGG | - | chr1.2:77950160-77950179 | MS.gene93859:intron | 40.0% |
| !! | TGGTTTGGAAGAGAGTATTG+AGG | - | chr1.2:77950469-77950488 | MS.gene93859:intron | 40.0% |
| !!! | ACTTTTGTTGTTTTGCCCCA+TGG | - | chr1.2:77948022-77948041 | MS.gene93859:CDS | 40.0% |
| AAACATGAGCACCTGAAGGA+TGG | + | chr1.2:77949750-77949769 | None:intergenic | 45.0% | |
| AAAGACCTACCTTCCCGATA+CGG | + | chr1.2:77946739-77946758 | None:intergenic | 45.0% | |
| AACTACATGGCAGAGACGAA+CGG | + | chr1.2:77948310-77948329 | None:intergenic | 45.0% | |
| AACTCTTGAACTCGCTACTC+GGG | - | chr1.2:77946114-77946133 | MS.gene93859:intron | 45.0% | |
| AAGAAGAGTTACTGTCGCCA+TGG | - | chr1.2:77949099-77949118 | MS.gene93859:intron | 45.0% | |
| AAGCATTACCCCAAAAGCTG+GGG | + | chr1.2:77947805-77947824 | None:intergenic | 45.0% | |
| ACAGTGCATGTGCATCAAAC+AGG | + | chr1.2:77950630-77950649 | None:intergenic | 45.0% | |
| ACCATTTGCGCAAACATGAG+TGG | - | chr1.2:77946710-77946729 | MS.gene93859:intron | 45.0% | |
| ACTTCAGAAAATGCAGCTGC+AGG | + | chr1.2:77946596-77946615 | None:intergenic | 45.0% | |
| AGAAGAGTTACTGTCGCCAT+GGG | - | chr1.2:77949100-77949119 | MS.gene93859:intron | 45.0% | |
| AGAGCCTTCCTCAAATACTG+AGG | + | chr1.2:77946528-77946547 | None:intergenic | 45.0% | |
| AGCAGAAATTCTTGGGACCT+TGG | - | chr1.2:77948739-77948758 | MS.gene93859:intron | 45.0% | |
| AGGAGAGTAATCGAAAGCCA+TGG | - | chr1.2:77947076-77947095 | MS.gene93859:intron | 45.0% | |
| ATACCCAATTTCGGCCGATA+TGG | - | chr1.2:77947331-77947350 | MS.gene93859:intron | 45.0% | |
| ATATCGGCCGAAATTGGGTA+TGG | + | chr1.2:77947332-77947351 | None:intergenic | 45.0% | |
| ATCATCCGAATTATCCGGTG+CGG | + | chr1.2:77946457-77946476 | None:intergenic | 45.0% | |
| ATGTATCAAAACCTGGCCAG+TGG | + | chr1.2:77948048-77948067 | None:intergenic | 45.0% | |
| CAACTCTTGAACTCGCTACT+CGG | - | chr1.2:77946113-77946132 | MS.gene93859:intron | 45.0% | |
| CAAGCATTACCCCAAAAGCT+GGG | + | chr1.2:77947806-77947825 | None:intergenic | 45.0% | |
| CAATATGCTCCTTCTTCCCT+AGG | + | chr1.2:77949479-77949498 | None:intergenic | 45.0% | |
| CATTTGCGCAAACATGAGTG+GGG | - | chr1.2:77946712-77946731 | MS.gene93859:intron | 45.0% | |
| CCATTTGCGCAAACATGAGT+GGG | - | chr1.2:77946711-77946730 | MS.gene93859:intron | 45.0% | |
| CTCTCCACCATACCCAATTT+CGG | - | chr1.2:77947322-77947341 | MS.gene93859:intron | 45.0% | |
| CTCTGATTGGCAGTAATCGA+GGG | + | chr1.2:77950551-77950570 | None:intergenic | 45.0% | |
| GACACCTCAGTATTTGAGGA+AGG | - | chr1.2:77946521-77946540 | MS.gene93859:intron | 45.0% | |
| GACAGCAGAATCATTCATGC+AGG | + | chr1.2:77946952-77946971 | None:intergenic | 45.0% | |
| GAGTCGAACAATTCGAACAG+AGG | - | chr1.2:77951018-77951037 | MS.gene93859:intron | 45.0% | |
| GCAGAGACGAACGGAAAATA+TGG | + | chr1.2:77948301-77948320 | None:intergenic | 45.0% | |
| GCCAACCGCAATTTGGATTA+TGG | - | chr1.2:77949124-77949143 | MS.gene93859:intron | 45.0% | |
| GCCATGATATCGGATTATGG+CGG | + | chr1.2:77947366-77947385 | None:intergenic | 45.0% | |
| GGCAAATGTTTAGCTGATGG+GGG | + | chr1.2:77946867-77946886 | None:intergenic | 45.0% | |
| GTCTCTGCCATGTAGTTGTT+TGG | - | chr1.2:77948313-77948332 | MS.gene93859:intron | 45.0% | |
| GTGTGTTGGAAGTAAGGTTG+TGG | - | chr1.2:77947623-77947642 | MS.gene93859:CDS | 45.0% | |
| GTTCGTGAGTAGGATTACAG+TGG | + | chr1.2:77949627-77949646 | None:intergenic | 45.0% | |
| TACTTGTCAACGTTACAGGG+TGG | - | chr1.2:77949660-77949679 | MS.gene93859:intron | 45.0% | |
| TATATGGTTCGTGCATGCCA+TGG | - | chr1.2:77947111-77947130 | MS.gene93859:intron | 45.0% | |
| TCAAGGTCTCAGGTTCCTAT+GGG | - | chr1.2:77948774-77948793 | MS.gene93859:intron | 45.0% | |
| TCATAGATCGACTAATCCGG+CGG | + | chr1.2:77948866-77948885 | None:intergenic | 45.0% | |
| TCATCTAGATTTACCACGCG+AGG | - | chr1.2:77949436-77949455 | MS.gene93859:intron | 45.0% | |
| TCATGTTTGCGCAAATGGTG+TGG | + | chr1.2:77946709-77946728 | None:intergenic | 45.0% | |
| TCCGCCATAATCCGATATCA+TGG | - | chr1.2:77947362-77947381 | MS.gene93859:intron | 45.0% | |
| TCTCATGTGAACTCTTGGCT+TGG | + | chr1.2:77949997-77950016 | None:intergenic | 45.0% | |
| TCTCTGATTGGCAGTAATCG+AGG | + | chr1.2:77950552-77950571 | None:intergenic | 45.0% | |
| TGTCTCATCATCCAAGCCTA+GGG | - | chr1.2:77949460-77949479 | MS.gene93859:intron | 45.0% | |
| TGTTATCGAATCGGCCATGA+CGG | - | chr1.2:77947274-77947293 | MS.gene93859:intron | 45.0% | |
| TTAGCACTGTTGTCTATGGC+GGG | + | chr1.2:77947440-77947459 | None:intergenic | 45.0% | |
| TTGTCTCATCATCCAAGCCT+AGG | - | chr1.2:77949459-77949478 | MS.gene93859:intron | 45.0% | |
| ! | AAAAGGCAGAGAAGTGTGTC+TGG | + | chr1.2:77949578-77949597 | None:intergenic | 45.0% |
| ! | AAAGGCAGAGAAGTGTGTCT+GGG | + | chr1.2:77949577-77949596 | None:intergenic | 45.0% |
| ! | AAATGGTGTGGAGCATCAAG+GGG | + | chr1.2:77946697-77946716 | None:intergenic | 45.0% |
| ! | ACGTTGTCAATGATGGAAGC+GGG | + | chr1.2:77946091-77946110 | None:intergenic | 45.0% |
| ! | AGGGAAGAAGGAGCATATTG+GGG | - | chr1.2:77949479-77949498 | MS.gene93859:intron | 45.0% |
| ! | ATTAGTCACCCCAGCTTTTG+GGG | - | chr1.2:77947794-77947813 | MS.gene93859:intron | 45.0% |
| ! | ATTGATTGCCTTTGGCGGAT+TGG | - | chr1.2:77950445-77950464 | MS.gene93859:CDS | 45.0% |
| ! | CAAATGGTGTGGAGCATCAA+GGG | + | chr1.2:77946698-77946717 | None:intergenic | 45.0% |
| ! | CTAGGGAAGAAGGAGCATAT+TGG | - | chr1.2:77949477-77949496 | MS.gene93859:intron | 45.0% |
| ! | GGTGCCATGATATCGGATTA+TGG | + | chr1.2:77947369-77947388 | None:intergenic | 45.0% |
| !! | CACATGTGGTGCCATGATAT+CGG | + | chr1.2:77947376-77947395 | None:intergenic | 45.0% |
| !! | TTAGCTTGCTTGTTTCCACC+CGG | - | chr1.2:77947863-77947882 | MS.gene93859:intron | 45.0% |
| !! | TTCCATATGGACTAGCCCAT+AGG | + | chr1.2:77948792-77948811 | None:intergenic | 45.0% |
| !! | TTCCTATGGGCTAGTCCATA+TGG | - | chr1.2:77948787-77948806 | MS.gene93859:intron | 45.0% |
| !! | TTGCTCGGCTTATTGGTTCT+TGG | + | chr1.2:77951202-77951221 | None:intergenic | 45.0% |
| !!! | TATTATTTAAAATTAATTCA+TGG | - | chr1.2:77947015-77947034 | MS.gene93859:intron | 5.0% |
| AACATCAACTAGCGTTGCCC+CGG | + | chr1.2:77948120-77948139 | None:intergenic | 50.0% | |
| AACATGAGTGGGGTCCGTAT+CGG | - | chr1.2:77946722-77946741 | MS.gene93859:intron | 50.0% | |
| AAGTGTGTCTGGGAAGTGAG+AGG | + | chr1.2:77949567-77949586 | None:intergenic | 50.0% | |
| AATCCCACCATCCACTAGCT+GGG | + | chr1.2:77948839-77948858 | None:intergenic | 50.0% | |
| ACCAATAAGCCGAGCAATGC+TGG | - | chr1.2:77951205-77951224 | MS.gene93859:CDS | 50.0% | |
| ATAGTCGGTACCTCTGAGCA+TGG | - | chr1.2:77949693-77949712 | MS.gene93859:intron | 50.0% | |
| ATCATGGCACCACATGTGGT+CGG | - | chr1.2:77947378-77947397 | MS.gene93859:intron | 50.0% | |
| ATTGTTCGACTCCCCTGATG+TGG | + | chr1.2:77951010-77951029 | None:intergenic | 50.0% | |
| CCAAGCATTACCCCAAAAGC+TGG | + | chr1.2:77947807-77947826 | None:intergenic | 50.0% | |
| CCAATAAGCCGAGCAATGCT+GGG | - | chr1.2:77951206-77951225 | MS.gene93859:CDS | 50.0% | |
| CCACACATTGCACTGTCACT+AGG | - | chr1.2:77947159-77947178 | MS.gene93859:intron | 50.0% | |
| CCCACTCATGTTTGCGCAAA+TGG | + | chr1.2:77946714-77946733 | None:intergenic | 50.0% | |
| CCTAGTGACAGTGCAATGTG+TGG | + | chr1.2:77947162-77947181 | None:intergenic | 50.0% | |
| CGAGTAGCGAGTTCAAGAGT+TGG | + | chr1.2:77946115-77946134 | None:intergenic | 50.0% | |
| CGATATCATGGCACCACATG+TGG | - | chr1.2:77947374-77947393 | MS.gene93859:intron | 50.0% | |
| CTCAAGGTCTCAGGTTCCTA+TGG | - | chr1.2:77948773-77948792 | MS.gene93859:intron | 50.0% | |
| GCGACAGTAACTCTTCTTCC+GGG | + | chr1.2:77949097-77949116 | None:intergenic | 50.0% | |
| GGAACAGCTATGCTGACAGT+GGG | + | chr1.2:77946070-77946089 | None:intergenic | 50.0% | |
| GGCGACAGTAACTCTTCTTC+CGG | + | chr1.2:77949098-77949117 | None:intergenic | 50.0% | |
| GTTATCGAATCGGCCATGAC+GGG | - | chr1.2:77947275-77947294 | MS.gene93859:intron | 50.0% | |
| TAGGAACCTGAGACCTTGAG+AGG | + | chr1.2:77948773-77948792 | None:intergenic | 50.0% | |
| TCATCCAAGCCTAGGGAAGA+AGG | - | chr1.2:77949467-77949486 | MS.gene93859:intron | 50.0% | |
| TGGGGAAGAAGAAGAAGCAG+CGG | - | chr1.2:77945927-77945946 | MS.gene93859:CDS | 50.0% | |
| ! | GCAAATGGTGTGGAGCATCA+AGG | + | chr1.2:77946699-77946718 | None:intergenic | 50.0% |
| !! | GTGTAGGTTTGGATTGGCAG+TGG | + | chr1.2:77950677-77950696 | None:intergenic | 50.0% |
| !! | TGGTCGGTATGGTGGGATTT+TGG | - | chr1.2:77947394-77947413 | MS.gene93859:intron | 50.0% |
| !!! | CCAGCTTTTGGGGTAATGCT+TGG | - | chr1.2:77947804-77947823 | MS.gene93859:intron | 50.0% |
| AAAACCTGGCCAGTGGCCAT+GGG | + | chr1.2:77948041-77948060 | None:intergenic | 55.0% | |
| ACATGAGTGGGGTCCGTATC+GGG | - | chr1.2:77946723-77946742 | MS.gene93859:intron | 55.0% | |
| ACCACATGTGGTCGGTATGG+TGG | - | chr1.2:77947386-77947405 | MS.gene93859:intron | 55.0% | |
| ATCCCACCATCCACTAGCTG+GGG | + | chr1.2:77948838-77948857 | None:intergenic | 55.0% | |
| CAAACCAGCCAATCCGCCAA+AGG | + | chr1.2:77950456-77950475 | None:intergenic | 55.0% | |
| CAATCCCACCATCCACTAGC+TGG | + | chr1.2:77948840-77948859 | None:intergenic | 55.0% | |
| CCAATTTCGGCCGATATGGC+GGG | - | chr1.2:77947335-77947354 | MS.gene93859:intron | 55.0% | |
| CCACATGTGGTCGGTATGGT+GGG | - | chr1.2:77947387-77947406 | MS.gene93859:intron | 55.0% | |
| CCCAATTTCGGCCGATATGG+CGG | - | chr1.2:77947334-77947353 | MS.gene93859:intron | 55.0% | |
| CCCAGCATTGCTCGGCTTAT+TGG | + | chr1.2:77951209-77951228 | None:intergenic | 55.0% | |
| CCGCCATATCGGCCGAAATT+GGG | + | chr1.2:77947337-77947356 | None:intergenic | 55.0% | |
| CTTGGAGTGTGCTCCTCTCA+AGG | - | chr1.2:77948757-77948776 | MS.gene93859:intron | 55.0% | |
| GAAGAAGCAGCGGCTGACAA+CGG | - | chr1.2:77945937-77945956 | MS.gene93859:CDS | 55.0% | |
| GATGATGAGACAACCTCGCG+TGG | + | chr1.2:77949452-77949471 | None:intergenic | 55.0% | |
| GGCGGAAAATCCCGCCATAT+CGG | + | chr1.2:77947348-77947367 | None:intergenic | 55.0% | |
| GGGAACAGCTATGCTGACAG+TGG | + | chr1.2:77946071-77946090 | None:intergenic | 55.0% | |
| TCGGCCGAAATTGGGTATGG+TGG | + | chr1.2:77947329-77947348 | None:intergenic | 55.0% | |
| TGCTCCTTCTTCCCTAGGCT+TGG | + | chr1.2:77949474-77949493 | None:intergenic | 55.0% | |
| TGTGCTCCTCTCAAGGTCTC+AGG | - | chr1.2:77948764-77948783 | MS.gene93859:intron | 55.0% | |
| TTAAATGGGCCCCCAGCTAG+TGG | - | chr1.2:77948825-77948844 | MS.gene93859:intron | 55.0% | |
| ! | CTTGAGAGGAGCACACTCCA+AGG | + | chr1.2:77948759-77948778 | None:intergenic | 55.0% |
| ! | GAATCGGCCATGACGGGAAT+CGG | - | chr1.2:77947281-77947300 | MS.gene93859:intron | 55.0% |
| ! | GGGGCAACGCTAGTTGATGT+TGG | - | chr1.2:77948119-77948138 | MS.gene93859:intron | 55.0% |
| ! | TGGCTTGGCAAGCCGTAGTT+TGG | + | chr1.2:77949982-77950001 | None:intergenic | 55.0% |
| !! | ATTGCCTTTGGCGGATTGGC+TGG | - | chr1.2:77950449-77950468 | MS.gene93859:CDS | 55.0% |
| !! | CAGCTAGTGGATGGTGGGAT+TGG | - | chr1.2:77948838-77948857 | MS.gene93859:intron | 55.0% |
| !! | CTTTGGCGGATTGGCTGGTT+TGG | - | chr1.2:77950454-77950473 | MS.gene93859:CDS | 55.0% |
| !! | GAGGTGTCTCAAGGTACTGC+AGG | + | chr1.2:77946509-77946528 | None:intergenic | 55.0% |
| !! | TTGTTTTGCCCCATGGCCAC+TGG | - | chr1.2:77948029-77948048 | MS.gene93859:CDS | 55.0% |
| AAACCTGGCCAGTGGCCATG+GGG | + | chr1.2:77948040-77948059 | None:intergenic | 60.0% | |
| CAAAACCTGGCCAGTGGCCA+TGG | + | chr1.2:77948042-77948061 | None:intergenic | 60.0% | |
| CAAATTGCGGTTGGCGCCCA+TGG | + | chr1.2:77949119-77949138 | None:intergenic | 60.0% | |
| CATGGGCGCCAACCGCAATT+TGG | - | chr1.2:77949117-77949136 | MS.gene93859:intron | 60.0% | |
| CCCACCATACCGACCACATG+TGG | + | chr1.2:77947390-77947409 | None:intergenic | 60.0% | |
| CCCGCCATATCGGCCGAAAT+TGG | + | chr1.2:77947338-77947357 | None:intergenic | 60.0% | |
| GGCACCACATGTGGTCGGTA+TGG | - | chr1.2:77947383-77947402 | MS.gene93859:intron | 60.0% | |
| TCCCACCATCCACTAGCTGG+GGG | + | chr1.2:77948837-77948856 | None:intergenic | 60.0% | |
| ! | GCACTGTTGTCTATGGCGGG+TGG | + | chr1.2:77947437-77947456 | None:intergenic | 60.0% |
| ! | TGGTGTGGAGCATCAAGGGG+TGG | + | chr1.2:77946694-77946713 | None:intergenic | 60.0% |
| !! | ACTGCCACCGATTCCCGTCA+TGG | + | chr1.2:77947291-77947310 | None:intergenic | 60.0% |
| !! | CTGTTGTCTATGGCGGGTGG+TGG | + | chr1.2:77947434-77947453 | None:intergenic | 60.0% |
| !! | GATGGTGGGATTGGTACCGC+CGG | - | chr1.2:77948847-77948866 | MS.gene93859:intron | 60.0% |
| !!! | GGGATTTTGGCTCTCCGCCA+TGG | - | chr1.2:77947407-77947426 | MS.gene93859:CDS | 60.0% |
| ATGGGCCCCCAGCTAGTGGA+TGG | - | chr1.2:77948829-77948848 | MS.gene93859:intron | 65.0% | |
| GAGTGGGGTCCGTATCGGGA+AGG | - | chr1.2:77946727-77946746 | MS.gene93859:intron | 65.0% | |
| GGGGTCCGTATCGGGAAGGT+AGG | - | chr1.2:77946731-77946750 | MS.gene93859:intron | 65.0% | |
| ! | GCCCCCAGCTAGTGGATGGT+GGG | - | chr1.2:77948833-77948852 | MS.gene93859:intron | 65.0% |
| ! | TCGGCCATGACGGGAATCGG+TGG | - | chr1.2:77947284-77947303 | MS.gene93859:intron | 65.0% |
| !! | CTATGGCGGGTGGTGGTCCA+TGG | + | chr1.2:77947427-77947446 | None:intergenic | 65.0% |
| TTGCCCCATGGCCACTGGCC+AGG | - | chr1.2:77948034-77948053 | MS.gene93859:CDS | 70.0% | |
| ! | GGCCCCCAGCTAGTGGATGG+TGG | - | chr1.2:77948832-77948851 | MS.gene93859:intron | 70.0% |
| ! | TGGCGGGTGGTGGTCCATGG+CGG | + | chr1.2:77947424-77947443 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 77945926 | 77951232 | 77945926 | ID=MS.gene93859 |
| chr1.2 | mRNA | 77945926 | 77951232 | 77945926 | ID=MS.gene93859.t1;Parent=MS.gene93859 |
| chr1.2 | exon | 77951023 | 77951232 | 77951023 | ID=MS.gene93859.t1.exon1;Parent=MS.gene93859.t1 |
| chr1.2 | CDS | 77951023 | 77951232 | 77951023 | ID=cds.MS.gene93859.t1;Parent=MS.gene93859.t1 |
| chr1.2 | exon | 77950860 | 77950907 | 77950860 | ID=MS.gene93859.t1.exon2;Parent=MS.gene93859.t1 |
| chr1.2 | CDS | 77950860 | 77950907 | 77950860 | ID=cds.MS.gene93859.t1;Parent=MS.gene93859.t1 |
| chr1.2 | exon | 77950580 | 77950747 | 77950580 | ID=MS.gene93859.t1.exon3;Parent=MS.gene93859.t1 |
| chr1.2 | CDS | 77950580 | 77950747 | 77950580 | ID=cds.MS.gene93859.t1;Parent=MS.gene93859.t1 |
| chr1.2 | exon | 77950410 | 77950476 | 77950410 | ID=MS.gene93859.t1.exon4;Parent=MS.gene93859.t1 |
| chr1.2 | CDS | 77950410 | 77950476 | 77950410 | ID=cds.MS.gene93859.t1;Parent=MS.gene93859.t1 |
| chr1.2 | exon | 77949007 | 77949071 | 77949007 | ID=MS.gene93859.t1.exon5;Parent=MS.gene93859.t1 |
| chr1.2 | CDS | 77949007 | 77949071 | 77949007 | ID=cds.MS.gene93859.t1;Parent=MS.gene93859.t1 |
| chr1.2 | exon | 77948013 | 77948091 | 77948013 | ID=MS.gene93859.t1.exon6;Parent=MS.gene93859.t1 |
| chr1.2 | CDS | 77948013 | 77948091 | 77948013 | ID=cds.MS.gene93859.t1;Parent=MS.gene93859.t1 |
| chr1.2 | exon | 77947599 | 77947714 | 77947599 | ID=MS.gene93859.t1.exon7;Parent=MS.gene93859.t1 |
| chr1.2 | CDS | 77947599 | 77947714 | 77947599 | ID=cds.MS.gene93859.t1;Parent=MS.gene93859.t1 |
| chr1.2 | exon | 77947401 | 77947480 | 77947401 | ID=MS.gene93859.t1.exon8;Parent=MS.gene93859.t1 |
| chr1.2 | CDS | 77947401 | 77947480 | 77947401 | ID=cds.MS.gene93859.t1;Parent=MS.gene93859.t1 |
| chr1.2 | exon | 77946650 | 77946719 | 77946650 | ID=MS.gene93859.t1.exon9;Parent=MS.gene93859.t1 |
| chr1.2 | CDS | 77946650 | 77946719 | 77946650 | ID=cds.MS.gene93859.t1;Parent=MS.gene93859.t1 |
| chr1.2 | exon | 77946119 | 77946196 | 77946119 | ID=MS.gene93859.t1.exon10;Parent=MS.gene93859.t1 |
| chr1.2 | CDS | 77946119 | 77946196 | 77946119 | ID=cds.MS.gene93859.t1;Parent=MS.gene93859.t1 |
| chr1.2 | exon | 77945926 | 77945988 | 77945926 | ID=MS.gene93859.t1.exon11;Parent=MS.gene93859.t1 |
| chr1.2 | CDS | 77945926 | 77945988 | 77945926 | ID=cds.MS.gene93859.t1;Parent=MS.gene93859.t1 |
| Gene Sequence |
| Protein sequence |
