Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97191.t1 | XP_003621403.1 | 99.8 | 480 | 1 | 0 | 1 | 480 | 1 | 480 | 1.80E-277 | 964.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97191.t1 | Q96558 | 95.6 | 480 | 21 | 0 | 1 | 480 | 1 | 480 | 1.6e-271 | 936.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97191.t1 | G7L571 | 99.8 | 480 | 1 | 0 | 1 | 480 | 1 | 480 | 1.3e-277 | 964.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04921 | MS.gene97191 | 0.816806 | 4.57E-52 | -1.69E-46 |
| MS.gene050894 | MS.gene97191 | 0.818837 | 1.59E-52 | -1.69E-46 |
| MS.gene051044 | MS.gene97191 | 0.817319 | 3.51E-52 | -1.69E-46 |
| MS.gene051138 | MS.gene97191 | 0.801247 | 9.85E-49 | -1.69E-46 |
| MS.gene052494 | MS.gene97191 | 0.833445 | 5.31E-56 | -1.69E-46 |
| MS.gene053097 | MS.gene97191 | 0.81844 | 1.96E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene97191 | -0.833874 | 4.15E-56 | -1.69E-46 |
| MS.gene055748 | MS.gene97191 | -0.803933 | 2.75E-49 | -1.69E-46 |
| MS.gene055751 | MS.gene97191 | -0.807091 | 5.99E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene97191 | -0.826789 | 2.24E-54 | -1.69E-46 |
| MS.gene058334 | MS.gene97191 | 0.80042 | 1.45E-48 | -1.69E-46 |
| MS.gene060076 | MS.gene97191 | 0.808914 | 2.45E-50 | -1.69E-46 |
| MS.gene060077 | MS.gene97191 | 0.801844 | 7.43E-49 | -1.69E-46 |
| MS.gene061044 | MS.gene97191 | 0.834444 | 2.99E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97191.t1 | MTR_7g012950 | 99.792 | 480 | 1 | 0 | 1 | 480 | 1 | 480 | 0.0 | 990 |
| MS.gene97191.t1 | MTR_5g043970 | 87.110 | 481 | 61 | 1 | 1 | 480 | 1 | 481 | 0.0 | 888 |
| MS.gene97191.t1 | MTR_4g082990 | 83.333 | 480 | 80 | 0 | 1 | 480 | 1 | 480 | 0.0 | 850 |
| MS.gene97191.t1 | MTR_4g109360 | 75.476 | 473 | 114 | 2 | 3 | 473 | 4 | 476 | 0.0 | 761 |
| MS.gene97191.t1 | MTR_6g014890 | 62.136 | 103 | 37 | 1 | 12 | 114 | 16 | 116 | 1.69e-35 | 130 |
| MS.gene97191.t1 | MTR_6g014930 | 56.436 | 101 | 21 | 2 | 17 | 117 | 1 | 78 | 3.73e-25 | 99.0 |
| MS.gene97191.t1 | MTR_6g014530 | 45.736 | 129 | 36 | 2 | 14 | 142 | 8 | 102 | 7.36e-25 | 99.0 |
| MS.gene97191.t1 | MTR_6g033430 | 72.222 | 72 | 20 | 0 | 64 | 135 | 1 | 72 | 2.22e-24 | 96.7 |
| MS.gene97191.t1 | MTR_6g014840 | 58.621 | 87 | 27 | 1 | 1 | 87 | 1 | 78 | 4.50e-24 | 95.9 |
| MS.gene97191.t1 | MTR_6g014870 | 54.945 | 91 | 18 | 1 | 49 | 139 | 16 | 83 | 7.96e-21 | 89.4 |
| MS.gene97191.t1 | MTR_6g014850 | 36.813 | 182 | 54 | 6 | 174 | 348 | 71 | 198 | 4.32e-18 | 83.6 |
| MS.gene97191.t1 | MTR_6g014850 | 48.039 | 102 | 26 | 2 | 1 | 102 | 1 | 75 | 3.44e-17 | 80.9 |
| MS.gene97191.t1 | MTR_6g014820 | 46.739 | 92 | 13 | 1 | 1 | 92 | 23 | 78 | 7.98e-16 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97191.t1 | AT3G29360 | 91.250 | 480 | 42 | 0 | 1 | 480 | 1 | 480 | 0.0 | 924 |
| MS.gene97191.t1 | AT3G29360 | 91.250 | 480 | 42 | 0 | 1 | 480 | 1 | 480 | 0.0 | 924 |
| MS.gene97191.t1 | AT5G15490 | 91.042 | 480 | 43 | 0 | 1 | 480 | 1 | 480 | 0.0 | 920 |
| MS.gene97191.t1 | AT5G39320 | 90.167 | 478 | 47 | 0 | 1 | 478 | 1 | 478 | 0.0 | 911 |
| MS.gene97191.t1 | AT1G26570 | 84.407 | 481 | 74 | 1 | 1 | 480 | 1 | 481 | 0.0 | 858 |
| MS.gene97191.t1 | AT3G01010 | 83.436 | 163 | 22 | 2 | 318 | 480 | 1 | 158 | 5.87e-97 | 289 |
Find 113 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCAGCAGATTTGACTTAT+TGG | 0.244863 | 7.3:+84933522 | MS.gene97191:CDS |
| GTTCCCTCGGCAAGGAATTC+CGG | 0.256675 | 7.3:-84933692 | None:intergenic |
| TTCACAGTTGTTGGACTCAT+TGG | 0.269285 | 7.3:-84934397 | None:intergenic |
| CTCACTTTCTTCACAGTTGT+TGG | 0.276565 | 7.3:-84934406 | None:intergenic |
| AATCCGGATCGTGTTCTTAT+TGG | 0.288816 | 7.3:+84933734 | MS.gene97191:CDS |
| AGCAGCAGATTTGACTTATT+GGG | 0.299764 | 7.3:+84933523 | MS.gene97191:CDS |
| CGAAATCCTTTGAGCCAAAA+AGG | 0.300056 | 7.3:-84933888 | None:intergenic |
| TGGAAGCTGGTCGCTGTTCC+AGG | 0.310193 | 7.3:-84933348 | None:intergenic |
| CTCAACGCTAGTGTCGGTTT+TGG | 0.313062 | 7.3:+84934010 | MS.gene97191:CDS |
| GGTTTCATTGTTTACTCAAT+TGG | 0.314253 | 7.3:+84934601 | MS.gene97191:CDS |
| TGGATAGATCTCTCTGGATT+TGG | 0.323196 | 7.3:-84934336 | None:intergenic |
| AGTCAAATCTGCTGCTTTGC+CGG | 0.327091 | 7.3:-84933516 | None:intergenic |
| TATCCATGAACAAGTTTGAT+TGG | 0.332354 | 7.3:+84934353 | MS.gene97191:CDS |
| GCTGTTCCAGGCTGCAATGC+GGG | 0.342501 | 7.3:-84933336 | None:intergenic |
| TTCCCTCGGCAAGGAATTCC+GGG | 0.362099 | 7.3:-84933691 | None:intergenic |
| ATTCCGGGTTTGATAGAATC+TGG | 0.368775 | 7.3:-84933676 | None:intergenic |
| AGATACTAACCACAAATCTT+TGG | 0.407402 | 7.3:+84933834 | MS.gene97191:CDS |
| CAAGGTTCAAGATATCCTTC+TGG | 0.418226 | 7.3:-84934045 | None:intergenic |
| TTCCTGAGGTTGCAGAGTAC+TGG | 0.418380 | 7.3:+84934092 | MS.gene97191:CDS |
| GCTGAGAAGTTACGTGAGAT+TGG | 0.419372 | 7.3:+84934580 | MS.gene97191:CDS |
| TGAAGAGTGTTTATGCTCAC+TGG | 0.422588 | 7.3:+84933798 | MS.gene97191:CDS |
| GTCCCAATCAAACTTGTTCA+TGG | 0.427996 | 7.3:-84934356 | None:intergenic |
| TTTGGTCCTCGGTAACTTGT+GGG | 0.434652 | 7.3:-84934318 | None:intergenic |
| CTCAGCAGACCAAAGATTTG+TGG | 0.441168 | 7.3:-84933843 | None:intergenic |
| AGAGCAATGACTGCCATTGT+TGG | 0.441868 | 7.3:-84933269 | None:intergenic |
| TGAAGAAAGTGAGTGTGGTT+TGG | 0.443618 | 7.3:+84934416 | MS.gene97191:CDS |
| AAGATTTGCTGCATTGGTGC+TGG | 0.447077 | 7.3:+84933233 | MS.gene97191:CDS |
| ATCCATGAACAAGTTTGATT+GGG | 0.448775 | 7.3:+84934354 | MS.gene97191:CDS |
| GAAGAAAGTGAGTGTGGTTT+GGG | 0.451541 | 7.3:+84934417 | MS.gene97191:CDS |
| ATCTCTCTGGATTTGGTCCT+CGG | 0.457354 | 7.3:-84934329 | None:intergenic |
| TCAGCACTTTGCGAGGCAAC+TGG | 0.459252 | 7.3:+84933926 | MS.gene97191:CDS |
| ATCGTGTTCTTATTGGAGGC+AGG | 0.460167 | 7.3:+84933741 | MS.gene97191:CDS |
| TCAAGGCCAGGTTCATAGAT+TGG | 0.464203 | 7.3:-84933368 | None:intergenic |
| TTACTCAATTGGAAAACCAT+TGG | 0.475272 | 7.3:+84934612 | MS.gene97191:CDS |
| CTCATTGGCTGCAAGTGGAT+TGG | 0.475733 | 7.3:-84934382 | None:intergenic |
| TTCCAGTACTCTGCAACCTC+AGG | 0.476120 | 7.3:-84934094 | None:intergenic |
| CCGGATCGTGTTCTTATTGG+AGG | 0.477174 | 7.3:+84933737 | MS.gene97191:CDS |
| CAACATCTGTGCTGAAGAAG+AGG | 0.478588 | 7.3:-84933421 | None:intergenic |
| ATTTGGTCCTCGGTAACTTG+TGG | 0.482296 | 7.3:-84934319 | None:intergenic |
| CAACTACACGGTTCACAAAA+CGG | 0.483047 | 7.3:-84934150 | None:intergenic |
| CTTTATCGCCGAGTAGCCCT+TGG | 0.484533 | 7.3:-84934276 | None:intergenic |
| GTATCTGTATTCTGACTGAA+TGG | 0.485576 | 7.3:+84934470 | MS.gene97191:CDS |
| ATCTCTGATTGCAGTTCCCT+CGG | 0.493214 | 7.3:-84933705 | None:intergenic |
| GTCGGCACTGACTCAAGGAT+TGG | 0.493453 | 7.3:+84933977 | MS.gene97191:CDS |
| GTGGTTAGTATCTGCTCCTC+GGG | 0.496401 | 7.3:-84933824 | None:intergenic |
| TGTGGTTAGTATCTGCTCCT+CGG | 0.501604 | 7.3:-84933825 | None:intergenic |
| AGGAGTCTCCCTTGTGTCAC+CGG | 0.503396 | 7.3:-84934239 | None:intergenic |
| TGTTCATGGATAGATCTCTC+TGG | 0.509208 | 7.3:-84934342 | None:intergenic |
| AAAACTCAGGGTCTTGGTGC+CGG | 0.513040 | 7.3:+84933497 | MS.gene97191:CDS |
| TAACACCCCGACTAAAACTC+AGG | 0.515317 | 7.3:+84933484 | MS.gene97191:CDS |
| GTCGACAACAGCCACTTCAA+TGG | 0.519962 | 7.3:-84933303 | None:intergenic |
| TTGGAAAACCATTGGATGCA+TGG | 0.520140 | 7.3:+84934620 | MS.gene97191:CDS |
| TTGGACTCATTGGCTGCAAG+TGG | 0.522664 | 7.3:-84934387 | None:intergenic |
| TAGCCCTTGGCAAACATCAA+TGG | 0.532703 | 7.3:-84934263 | None:intergenic |
| ACACTAGCGTTGAGGAACTT+AGG | 0.534232 | 7.3:-84934001 | None:intergenic |
| GAAGAGTGTTTATGCTCACT+GGG | 0.534298 | 7.3:+84933799 | MS.gene97191:CDS |
| CCTGCCATTGATGTTTGCCA+AGG | 0.535085 | 7.3:+84934259 | MS.gene97191:CDS |
| CTGTTCCAGGCTGCAATGCG+GGG | 0.539741 | 7.3:-84933335 | None:intergenic |
| CTAAACCCCGCATTGCAGCC+TGG | 0.548047 | 7.3:+84933330 | MS.gene97191:CDS |
| TCCTTGAGCCATGCATCCAA+TGG | 0.549377 | 7.3:-84934628 | None:intergenic |
| TGGGTCGAATATGCTTATGT+TGG | 0.549577 | 7.3:-84934299 | None:intergenic |
| GTCTACATCTGCGAGTGCAA+TGG | 0.551640 | 7.3:+84934067 | MS.gene97191:CDS |
| ATGGTGAAGATTTGCTGCAT+TGG | 0.551855 | 7.3:+84933227 | MS.gene97191:CDS |
| CCTTGGCAAACATCAATGGC+AGG | 0.551877 | 7.3:-84934259 | None:intergenic |
| CAGCTTCCAATCTATGAACC+TGG | 0.553953 | 7.3:+84933362 | MS.gene97191:CDS |
| TGGTGGATCTTGCTTCCAGA+AGG | 0.555042 | 7.3:+84934030 | MS.gene97191:CDS |
| CGCTGTTCCAGGCTGCAATG+CGG | 0.557528 | 7.3:-84933337 | None:intergenic |
| GATGTTTGCCAAGGGCTACT+CGG | 0.558346 | 7.3:+84934268 | MS.gene97191:CDS |
| CCGACTAAAACTCAGGGTCT+TGG | 0.559330 | 7.3:+84933491 | MS.gene97191:CDS |
| ATGCTGTCGGCACTGACTCA+AGG | 0.561093 | 7.3:+84933972 | MS.gene97191:CDS |
| TGCATTGGTGCTGGATATGT+CGG | 0.561538 | 7.3:+84933242 | MS.gene97191:CDS |
| TTTACAACATCGTCAAGGCC+AGG | 0.562538 | 7.3:-84933380 | None:intergenic |
| CCTCCAATAAGAACACGATC+CGG | 0.563262 | 7.3:-84933737 | None:intergenic |
| TCAAGACACTTGATTATCAG+AGG | 0.564119 | 7.3:+84934500 | MS.gene97191:CDS |
| ACCATTGGATGCATGGCTCA+AGG | 0.567026 | 7.3:+84934627 | MS.gene97191:CDS |
| TGAGTCAGTGCCGACAGCAT+AGG | 0.569368 | 7.3:-84933969 | None:intergenic |
| TTCGCATTCAAGAAAGATAC+CGG | 0.570300 | 7.3:+84934220 | MS.gene97191:CDS |
| AGAAAGATACCGGTGACACA+AGG | 0.573409 | 7.3:+84934230 | MS.gene97191:CDS |
| TCGTGTTCTTATTGGAGGCA+GGG | 0.575320 | 7.3:+84933742 | MS.gene97191:CDS |
| TTTGTCAGACTTTGAGACAT+CGG | 0.579194 | 7.3:-84933567 | None:intergenic |
| CAACAAGTGGCCTATGCTGT+CGG | 0.580264 | 7.3:+84933959 | MS.gene97191:CDS |
| TGCAATGTCAGCACTTTGCG+AGG | 0.585037 | 7.3:+84933919 | MS.gene97191:CDS |
| TTGGCTGCAAGTGGATTGGA+TGG | 0.586131 | 7.3:-84934378 | None:intergenic |
| ACAACAGCCACTTCAATGGA+TGG | 0.588532 | 7.3:-84933299 | None:intergenic |
| TATCTGTATTCTGACTGAAT+GGG | 0.594057 | 7.3:+84934471 | MS.gene97191:CDS |
| CTGCCATTGATGTTTGCCAA+GGG | 0.597889 | 7.3:+84934260 | MS.gene97191:CDS |
| CAGGTTCATAGATTGGAAGC+TGG | 0.598328 | 7.3:-84933361 | None:intergenic |
| TGATTGCAGTTCCCTCGGCA+AGG | 0.601237 | 7.3:-84933700 | None:intergenic |
| TAAGTGTCCATCCATTGAAG+TGG | 0.603664 | 7.3:+84933292 | MS.gene97191:CDS |
| TTATGCTCACTGGGTTCCCG+AGG | 0.611107 | 7.3:+84933808 | MS.gene97191:CDS |
| ATTCCAGATTCTATCAAACC+CGG | 0.620754 | 7.3:+84933673 | MS.gene97191:CDS |
| AACCCGGAATTCCTTGCCGA+GGG | 0.623469 | 7.3:+84933689 | MS.gene97191:CDS |
| AAGTTCCTCAACGCTAGTGT+CGG | 0.625351 | 7.3:+84934004 | MS.gene97191:CDS |
| TGGTGCAAATATTCAACAAG+TGG | 0.626987 | 7.3:+84933946 | MS.gene97191:CDS |
| AAACCCGGAATTCCTTGCCG+AGG | 0.628724 | 7.3:+84933688 | MS.gene97191:CDS |
| TGAAGAAGAGGTTCTTGCCA+CGG | 0.630240 | 7.3:-84933409 | None:intergenic |
| CAAAACCGACACTAGCGTTG+AGG | 0.636214 | 7.3:-84934009 | None:intergenic |
| TGTCCCTGTCAAAACTGCTG+AGG | 0.636569 | 7.3:+84933610 | MS.gene97191:CDS |
| AGTACTCTGCAACCTCAGGA+AGG | 0.641636 | 7.3:-84934090 | None:intergenic |
| CGAGTGCAATGGCCTTCCTG+AGG | 0.644980 | 7.3:+84934078 | MS.gene97191:CDS |
| AACACCCCGACTAAAACTCA+GGG | 0.646593 | 7.3:+84933485 | MS.gene97191:CDS |
| GGAGGCAGGGAAACCCCTGA+AGG | 0.651550 | 7.3:+84933755 | MS.gene97191:CDS |
| ATATGTCGGTGGTCCAACAA+TGG | 0.658539 | 7.3:+84933256 | MS.gene97191:CDS |
| TGCACTCGCAGATGTAGACA+AGG | 0.662891 | 7.3:-84934063 | None:intergenic |
| GAAAGATACCGGTGACACAA+GGG | 0.663967 | 7.3:+84934231 | MS.gene97191:CDS |
| ATTGCTTTACAACATCGTCA+AGG | 0.664980 | 7.3:-84933385 | None:intergenic |
| AACTGTGAAGAAAGTGAGTG+TGG | 0.665071 | 7.3:+84934411 | MS.gene97191:CDS |
| GCTCAAGGATATGCCAGCTG+TGG | 0.666287 | 7.3:+84934642 | MS.gene97191:CDS |
| TGAACATAGATGCAACTACA+CGG | 0.683251 | 7.3:-84934162 | None:intergenic |
| ATTGGTGCTGGATATGTCGG+TGG | 0.703962 | 7.3:+84933245 | MS.gene97191:CDS |
| GAAGCAACAAAAGATGCACA+TGG | 0.706553 | 7.3:+84934448 | MS.gene97191:CDS |
| ATTCGACCCACAAGTTACCG+AGG | 0.712173 | 7.3:+84934312 | MS.gene97191:CDS |
| GATGTTGTAAAGCAATGCCG+TGG | 0.754742 | 7.3:+84933392 | MS.gene97191:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCAGAGATCTTTTTAATC+CGG | + | chr7.3:84933718-84933737 | MS.gene97191:CDS | 25.0% |
| AACAAAAAGATCGCTATTCT+CGG | + | chr7.3:84934196-84934215 | MS.gene97191:CDS | 30.0% | |
| AGATACTAACCACAAATCTT+TGG | + | chr7.3:84933834-84933853 | MS.gene97191:CDS | 30.0% | |
| ATCCATGAACAAGTTTGATT+GGG | + | chr7.3:84934354-84934373 | MS.gene97191:CDS | 30.0% | |
| GGTTTCATTGTTTACTCAAT+TGG | + | chr7.3:84934601-84934620 | MS.gene97191:CDS | 30.0% | |
| TATCCATGAACAAGTTTGAT+TGG | + | chr7.3:84934353-84934372 | MS.gene97191:CDS | 30.0% | |
| TATCTGTATTCTGACTGAAT+GGG | + | chr7.3:84934471-84934490 | MS.gene97191:CDS | 30.0% | |
| TGTTGAAAAACATGTCTTTG+AGG | + | chr7.3:84933439-84933458 | MS.gene97191:CDS | 30.0% | |
| TTACTCAATTGGAAAACCAT+TGG | + | chr7.3:84934612-84934631 | MS.gene97191:CDS | 30.0% | |
| !!! | AAACCAGCATTTGTTTTTGA+TGG | + | chr7.3:84934541-84934560 | MS.gene97191:CDS | 30.0% |
| !!! | ATTTTGACTCACAATAGCAA+GGG | + | chr7.3:84933644-84933663 | MS.gene97191:CDS | 30.0% |
| ATTCCAGATTCTATCAAACC+CGG | + | chr7.3:84933673-84933692 | MS.gene97191:CDS | 35.0% | |
| ATTGCTTTACAACATCGTCA+AGG | - | chr7.3:84933388-84933407 | None:intergenic | 35.0% | |
| CTTCCATCAAAAACAAATGC+TGG | - | chr7.3:84934547-84934566 | None:intergenic | 35.0% | |
| GTATCTGTATTCTGACTGAA+TGG | + | chr7.3:84934470-84934489 | MS.gene97191:CDS | 35.0% | |
| TCAAGACACTTGATTATCAG+AGG | + | chr7.3:84934500-84934519 | MS.gene97191:CDS | 35.0% | |
| TGAACATAGATGCAACTACA+CGG | - | chr7.3:84934165-84934184 | None:intergenic | 35.0% | |
| TGGTGCAAATATTCAACAAG+TGG | + | chr7.3:84933946-84933965 | MS.gene97191:CDS | 35.0% | |
| TTCGCATTCAAGAAAGATAC+CGG | + | chr7.3:84934220-84934239 | MS.gene97191:CDS | 35.0% | |
| ! | AAGCAGCAGATTTGACTTAT+TGG | + | chr7.3:84933522-84933541 | MS.gene97191:CDS | 35.0% |
| ! | AGCAGCAGATTTGACTTATT+GGG | + | chr7.3:84933523-84933542 | MS.gene97191:CDS | 35.0% |
| !! | TTTGTCAGACTTTGAGACAT+CGG | - | chr7.3:84933570-84933589 | None:intergenic | 35.0% |
| !!! | CAGCATTTGTTTTTGATGGA+AGG | + | chr7.3:84934545-84934564 | MS.gene97191:CDS | 35.0% |
| !!! | GATTTTGACTCACAATAGCA+AGG | + | chr7.3:84933643-84933662 | MS.gene97191:CDS | 35.0% |
| AACTGTGAAGAAAGTGAGTG+TGG | + | chr7.3:84934411-84934430 | MS.gene97191:CDS | 40.0% | |
| AATCCGGATCGTGTTCTTAT+TGG | + | chr7.3:84933734-84933753 | MS.gene97191:CDS | 40.0% | |
| ATTCCGGGTTTGATAGAATC+TGG | - | chr7.3:84933679-84933698 | None:intergenic | 40.0% | |
| CAACTACACGGTTCACAAAA+CGG | - | chr7.3:84934153-84934172 | None:intergenic | 40.0% | |
| CAAGGTTCAAGATATCCTTC+TGG | - | chr7.3:84934048-84934067 | None:intergenic | 40.0% | |
| CGAAATCCTTTGAGCCAAAA+AGG | - | chr7.3:84933891-84933910 | None:intergenic | 40.0% | |
| CTCACTTTCTTCACAGTTGT+TGG | - | chr7.3:84934409-84934428 | None:intergenic | 40.0% | |
| GAAGAAAGTGAGTGTGGTTT+GGG | + | chr7.3:84934417-84934436 | MS.gene97191:CDS | 40.0% | |
| GAAGCAACAAAAGATGCACA+TGG | + | chr7.3:84934448-84934467 | MS.gene97191:CDS | 40.0% | |
| TAAGTGTCCATCCATTGAAG+TGG | + | chr7.3:84933292-84933311 | MS.gene97191:CDS | 40.0% | |
| TGAAGAAAGTGAGTGTGGTT+TGG | + | chr7.3:84934416-84934435 | MS.gene97191:CDS | 40.0% | |
| TGGATAGATCTCTCTGGATT+TGG | - | chr7.3:84934339-84934358 | None:intergenic | 40.0% | |
| TGGGTCGAATATGCTTATGT+TGG | - | chr7.3:84934302-84934321 | None:intergenic | 40.0% | |
| TGTTCATGGATAGATCTCTC+TGG | - | chr7.3:84934345-84934364 | None:intergenic | 40.0% | |
| TTCACAGTTGTTGGACTCAT+TGG | - | chr7.3:84934400-84934419 | None:intergenic | 40.0% | |
| TTGGAAAACCATTGGATGCA+TGG | + | chr7.3:84934620-84934639 | MS.gene97191:CDS | 40.0% | |
| ! | AACAGCTTTTAGACCTTCAG+GGG | - | chr7.3:84933771-84933790 | None:intergenic | 40.0% |
| ! | GAACAGCTTTTAGACCTTCA+GGG | - | chr7.3:84933772-84933791 | None:intergenic | 40.0% |
| ! | GTCCCAATCAAACTTGTTCA+TGG | - | chr7.3:84934359-84934378 | None:intergenic | 40.0% |
| ! | TGAACAGCTTTTAGACCTTC+AGG | - | chr7.3:84933773-84933792 | None:intergenic | 40.0% |
| !! | ATGGTGAAGATTTGCTGCAT+TGG | + | chr7.3:84933227-84933246 | MS.gene97191:CDS | 40.0% |
| !! | GAAGAGTGTTTATGCTCACT+GGG | + | chr7.3:84933799-84933818 | MS.gene97191:CDS | 40.0% |
| !! | TGAAGAGTGTTTATGCTCAC+TGG | + | chr7.3:84933798-84933817 | MS.gene97191:CDS | 40.0% |
| AACACCCCGACTAAAACTCA+GGG | + | chr7.3:84933485-84933504 | MS.gene97191:CDS | 45.0% | |
| AAGTTCCTCAACGCTAGTGT+CGG | + | chr7.3:84934004-84934023 | MS.gene97191:CDS | 45.0% | |
| ACAACAGCCACTTCAATGGA+TGG | - | chr7.3:84933302-84933321 | None:intergenic | 45.0% | |
| AGAAAGATACCGGTGACACA+AGG | + | chr7.3:84934230-84934249 | MS.gene97191:CDS | 45.0% | |
| AGAGCAATGACTGCCATTGT+TGG | - | chr7.3:84933272-84933291 | None:intergenic | 45.0% | |
| ATATGTCGGTGGTCCAACAA+TGG | + | chr7.3:84933256-84933275 | MS.gene97191:CDS | 45.0% | |
| ATCGTGTTCTTATTGGAGGC+AGG | + | chr7.3:84933741-84933760 | MS.gene97191:CDS | 45.0% | |
| ATCTCTGATTGCAGTTCCCT+CGG | - | chr7.3:84933708-84933727 | None:intergenic | 45.0% | |
| ATTTGGTCCTCGGTAACTTG+TGG | - | chr7.3:84934322-84934341 | None:intergenic | 45.0% | |
| CAACATCTGTGCTGAAGAAG+AGG | - | chr7.3:84933424-84933443 | None:intergenic | 45.0% | |
| CAGCTTCCAATCTATGAACC+TGG | + | chr7.3:84933362-84933381 | MS.gene97191:CDS | 45.0% | |
| CAGGTTCATAGATTGGAAGC+TGG | - | chr7.3:84933364-84933383 | None:intergenic | 45.0% | |
| CCTCCAATAAGAACACGATC+CGG | - | chr7.3:84933740-84933759 | None:intergenic | 45.0% | |
| CTCAGCAGACCAAAGATTTG+TGG | - | chr7.3:84933846-84933865 | None:intergenic | 45.0% | |
| CTGCCATTGATGTTTGCCAA+GGG | + | chr7.3:84934260-84934279 | MS.gene97191:CDS | 45.0% | |
| GAAAGATACCGGTGACACAA+GGG | + | chr7.3:84934231-84934250 | MS.gene97191:CDS | 45.0% | |
| GATGTTGTAAAGCAATGCCG+TGG | + | chr7.3:84933392-84933411 | MS.gene97191:CDS | 45.0% | |
| GCTGAGAAGTTACGTGAGAT+TGG | + | chr7.3:84934580-84934599 | MS.gene97191:CDS | 45.0% | |
| TAACACCCCGACTAAAACTC+AGG | + | chr7.3:84933484-84933503 | MS.gene97191:CDS | 45.0% | |
| TAGCCCTTGGCAAACATCAA+TGG | - | chr7.3:84934266-84934285 | None:intergenic | 45.0% | |
| TCAAGGCCAGGTTCATAGAT+TGG | - | chr7.3:84933371-84933390 | None:intergenic | 45.0% | |
| TCGTGTTCTTATTGGAGGCA+GGG | + | chr7.3:84933742-84933761 | MS.gene97191:CDS | 45.0% | |
| TGAAGAAGAGGTTCTTGCCA+CGG | - | chr7.3:84933412-84933431 | None:intergenic | 45.0% | |
| TGTGGTTAGTATCTGCTCCT+CGG | - | chr7.3:84933828-84933847 | None:intergenic | 45.0% | |
| TTTACAACATCGTCAAGGCC+AGG | - | chr7.3:84933383-84933402 | None:intergenic | 45.0% | |
| ! | ACACTAGCGTTGAGGAACTT+AGG | - | chr7.3:84934004-84934023 | None:intergenic | 45.0% |
| ! | ATCTCTCTGGATTTGGTCCT+CGG | - | chr7.3:84934332-84934351 | None:intergenic | 45.0% |
| ! | TTTGGTCCTCGGTAACTTGT+GGG | - | chr7.3:84934321-84934340 | None:intergenic | 45.0% |
| !! | AAGACCCTGAGTTTTAGTCG+GGG | - | chr7.3:84933492-84933511 | None:intergenic | 45.0% |
| !! | AAGATTTGCTGCATTGGTGC+TGG | + | chr7.3:84933233-84933252 | MS.gene97191:CDS | 45.0% |
| !! | AGTCAAATCTGCTGCTTTGC+CGG | - | chr7.3:84933519-84933538 | None:intergenic | 45.0% |
| !! | ATTGCCTCAGCAGTTTTGAC+AGG | - | chr7.3:84933617-84933636 | None:intergenic | 45.0% |
| !! | CAAGACCCTGAGTTTTAGTC+GGG | - | chr7.3:84933493-84933512 | None:intergenic | 45.0% |
| !! | CCAAGACCCTGAGTTTTAGT+CGG | - | chr7.3:84933494-84933513 | None:intergenic | 45.0% |
| !! | TGCATTGGTGCTGGATATGT+CGG | + | chr7.3:84933242-84933261 | MS.gene97191:CDS | 45.0% |
| !! | TTGCCTCAGCAGTTTTGACA+GGG | - | chr7.3:84933616-84933635 | None:intergenic | 45.0% |
| !!! | CTAACGCCTTTTTGGCTCAA+AGG | + | chr7.3:84933882-84933901 | MS.gene97191:CDS | 45.0% |
| ACCATTGGATGCATGGCTCA+AGG | + | chr7.3:84934627-84934646 | MS.gene97191:CDS | 50.0% | |
| AGTACTCTGCAACCTCAGGA+AGG | - | chr7.3:84934093-84934112 | None:intergenic | 50.0% | |
| ATTCGACCCACAAGTTACCG+AGG | + | chr7.3:84934312-84934331 | MS.gene97191:CDS | 50.0% | |
| CAAAACCGACACTAGCGTTG+AGG | - | chr7.3:84934012-84934031 | None:intergenic | 50.0% | |
| CAACAAGTGGCCTATGCTGT+CGG | + | chr7.3:84933959-84933978 | MS.gene97191:CDS | 50.0% | |
| CCGACTAAAACTCAGGGTCT+TGG | + | chr7.3:84933491-84933510 | MS.gene97191:CDS | 50.0% | |
| CCGGATCGTGTTCTTATTGG+AGG | + | chr7.3:84933737-84933756 | MS.gene97191:CDS | 50.0% | |
| CCTGCCATTGATGTTTGCCA+AGG | + | chr7.3:84934259-84934278 | MS.gene97191:CDS | 50.0% | |
| CCTTGGCAAACATCAATGGC+AGG | - | chr7.3:84934262-84934281 | None:intergenic | 50.0% | |
| GATGTTTGCCAAGGGCTACT+CGG | + | chr7.3:84934268-84934287 | MS.gene97191:CDS | 50.0% | |
| GTCGACAACAGCCACTTCAA+TGG | - | chr7.3:84933306-84933325 | None:intergenic | 50.0% | |
| GTCTACATCTGCGAGTGCAA+TGG | + | chr7.3:84934067-84934086 | MS.gene97191:CDS | 50.0% | |
| GTGGTTAGTATCTGCTCCTC+GGG | - | chr7.3:84933827-84933846 | None:intergenic | 50.0% | |
| TCCTTGAGCCATGCATCCAA+TGG | - | chr7.3:84934631-84934650 | None:intergenic | 50.0% | |
| TGCAATGTCAGCACTTTGCG+AGG | + | chr7.3:84933919-84933938 | MS.gene97191:CDS | 50.0% | |
| TGCACTCGCAGATGTAGACA+AGG | - | chr7.3:84934066-84934085 | None:intergenic | 50.0% | |
| TGTCCCTGTCAAAACTGCTG+AGG | + | chr7.3:84933610-84933629 | MS.gene97191:CDS | 50.0% | |
| TTCCAGTACTCTGCAACCTC+AGG | - | chr7.3:84934097-84934116 | None:intergenic | 50.0% | |
| TTCCTGAGGTTGCAGAGTAC+TGG | + | chr7.3:84934092-84934111 | MS.gene97191:CDS | 50.0% | |
| ! | AAAACTCAGGGTCTTGGTGC+CGG | + | chr7.3:84933497-84933516 | MS.gene97191:CDS | 50.0% |
| ! | CTCATTGGCTGCAAGTGGAT+TGG | - | chr7.3:84934385-84934404 | None:intergenic | 50.0% |
| ! | TGGTGGATCTTGCTTCCAGA+AGG | + | chr7.3:84934030-84934049 | MS.gene97191:CDS | 50.0% |
| ! | TTGGACTCATTGGCTGCAAG+TGG | - | chr7.3:84934390-84934409 | None:intergenic | 50.0% |
| !! | ATTGGTGCTGGATATGTCGG+TGG | + | chr7.3:84933245-84933264 | MS.gene97191:CDS | 50.0% |
| !! | GCTTGCTGCTAACGCCTTTT+TGG | + | chr7.3:84933874-84933893 | MS.gene97191:CDS | 50.0% |
| !! | TTGGCTGCAAGTGGATTGGA+TGG | - | chr7.3:84934381-84934400 | None:intergenic | 50.0% |
| !!! | AACGCTAGTGTCGGTTTTGG+TGG | + | chr7.3:84934013-84934032 | MS.gene97191:CDS | 50.0% |
| !!! | CTCAACGCTAGTGTCGGTTT+TGG | + | chr7.3:84934010-84934029 | MS.gene97191:CDS | 50.0% |
| AAACCCGGAATTCCTTGCCG+AGG | + | chr7.3:84933688-84933707 | MS.gene97191:CDS | 55.0% | |
| AACCCGGAATTCCTTGCCGA+GGG | + | chr7.3:84933689-84933708 | MS.gene97191:CDS | 55.0% | |
| AGGAGTCTCCCTTGTGTCAC+CGG | - | chr7.3:84934242-84934261 | None:intergenic | 55.0% | |
| CTTTATCGCCGAGTAGCCCT+TGG | - | chr7.3:84934279-84934298 | None:intergenic | 55.0% | |
| GCTCAAGGATATGCCAGCTG+TGG | + | chr7.3:84934642-84934661 | MS.gene97191:CDS | 55.0% | |
| GTTCCCTCGGCAAGGAATTC+CGG | - | chr7.3:84933695-84933714 | None:intergenic | 55.0% | |
| TCAGCACTTTGCGAGGCAAC+TGG | + | chr7.3:84933926-84933945 | MS.gene97191:CDS | 55.0% | |
| TGATTGCAGTTCCCTCGGCA+AGG | - | chr7.3:84933703-84933722 | None:intergenic | 55.0% | |
| TTATGCTCACTGGGTTCCCG+AGG | + | chr7.3:84933808-84933827 | MS.gene97191:CDS | 55.0% | |
| TTCCCTCGGCAAGGAATTCC+GGG | - | chr7.3:84933694-84933713 | None:intergenic | 55.0% | |
| !! | ATGCTGTCGGCACTGACTCA+AGG | + | chr7.3:84933972-84933991 | MS.gene97191:CDS | 55.0% |
| !! | GTCGGCACTGACTCAAGGAT+TGG | + | chr7.3:84933977-84933996 | MS.gene97191:CDS | 55.0% |
| !! | TGAGTCAGTGCCGACAGCAT+AGG | - | chr7.3:84933972-84933991 | None:intergenic | 55.0% |
| CGAGTGCAATGGCCTTCCTG+AGG | + | chr7.3:84934078-84934097 | MS.gene97191:CDS | 60.0% | |
| CGCTGTTCCAGGCTGCAATG+CGG | - | chr7.3:84933340-84933359 | None:intergenic | 60.0% | |
| CTAAACCCCGCATTGCAGCC+TGG | + | chr7.3:84933330-84933349 | MS.gene97191:CDS | 60.0% | |
| CTGTTCCAGGCTGCAATGCG+GGG | - | chr7.3:84933338-84933357 | None:intergenic | 60.0% | |
| GCTGTTCCAGGCTGCAATGC+GGG | - | chr7.3:84933339-84933358 | None:intergenic | 60.0% | |
| TGGAAGCTGGTCGCTGTTCC+AGG | - | chr7.3:84933351-84933370 | None:intergenic | 60.0% | |
| GGAGGCAGGGAAACCCCTGA+AGG | + | chr7.3:84933755-84933774 | MS.gene97191:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 84933227 | 84934669 | 84933227 | ID=MS.gene97191 |
| chr7.3 | mRNA | 84933227 | 84934669 | 84933227 | ID=MS.gene97191.t1;Parent=MS.gene97191 |
| chr7.3 | exon | 84933227 | 84934669 | 84933227 | ID=MS.gene97191.t1.exon1;Parent=MS.gene97191.t1 |
| chr7.3 | CDS | 84933227 | 84934669 | 84933227 | ID=cds.MS.gene97191.t1;Parent=MS.gene97191.t1 |
| Gene Sequence |
| Protein sequence |
