Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04921.t1 | KEH34654.1 | 85.2 | 142 | 13 | 2 | 1 | 141 | 1 | 135 | 6.20E-61 | 243.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04921.t1 | P62930 | 43.5 | 138 | 63 | 7 | 1 | 136 | 1 | 125 | 1.0e-16 | 87.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04921.t1 | A0A072UXV7 | 85.2 | 142 | 13 | 2 | 1 | 141 | 1 | 135 | 4.5e-61 | 243.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04921 | MS.gene050170 | -0.819924 | 8.99E-53 | -1.69E-46 |
| MS.gene04921 | MS.gene050338 | 0.80914 | 2.19E-50 | -1.69E-46 |
| MS.gene04921 | MS.gene050496 | -0.800817 | 1.21E-48 | -1.69E-46 |
| MS.gene04921 | MS.gene052494 | 0.803243 | 3.83E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene05470 | -0.817082 | 3.96E-52 | -1.69E-46 |
| MS.gene04921 | MS.gene05589 | -0.848644 | 5.38E-60 | -1.69E-46 |
| MS.gene04921 | MS.gene056504 | -0.81714 | 3.85E-52 | -1.69E-46 |
| MS.gene04921 | MS.gene056694 | 0.829604 | 4.69E-55 | -1.69E-46 |
| MS.gene04921 | MS.gene06000 | -0.814294 | 1.66E-51 | -1.69E-46 |
| MS.gene04921 | MS.gene060982 | -0.807772 | 4.29E-50 | -1.69E-46 |
| MS.gene04921 | MS.gene061044 | 0.834635 | 2.67E-56 | -1.69E-46 |
| MS.gene04921 | MS.gene061683 | 0.827539 | 1.48E-54 | -1.69E-46 |
| MS.gene04921 | MS.gene061777 | 0.842226 | 2.94E-58 | -1.69E-46 |
| MS.gene04921 | MS.gene064707 | -0.821008 | 5.07E-53 | -1.69E-46 |
| MS.gene04921 | MS.gene064890 | 0.802321 | 5.93E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene065427 | 0.817382 | 3.40E-52 | -1.69E-46 |
| MS.gene04921 | MS.gene065973 | 0.838743 | 2.40E-57 | -1.69E-46 |
| MS.gene04921 | MS.gene066309 | 0.815204 | 1.04E-51 | -1.69E-46 |
| MS.gene04921 | MS.gene066358 | 0.827797 | 1.28E-54 | -1.69E-46 |
| MS.gene04921 | MS.gene066359 | 0.814224 | 1.72E-51 | -1.69E-46 |
| MS.gene04921 | MS.gene068585 | 0.80148 | 8.83E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene068820 | -0.801868 | 7.35E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene07042 | 0.830714 | 2.51E-55 | -1.69E-46 |
| MS.gene04921 | MS.gene070955 | -0.800191 | 1.62E-48 | -1.69E-46 |
| MS.gene04921 | MS.gene071308 | -0.801609 | 8.31E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene072496 | -0.800184 | 1.62E-48 | -1.69E-46 |
| MS.gene04921 | MS.gene072875 | -0.804079 | 2.57E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene07302 | -0.805768 | 1.14E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene074380 | -0.819533 | 1.10E-52 | -1.69E-46 |
| MS.gene04921 | MS.gene09162 | 0.810406 | 1.17E-50 | -1.69E-46 |
| MS.gene04921 | MS.gene09795 | -0.807102 | 5.95E-50 | -1.69E-46 |
| MS.gene04921 | MS.gene09797 | -0.829742 | 4.34E-55 | -1.69E-46 |
| MS.gene04921 | MS.gene20813 | -0.801056 | 1.08E-48 | -1.69E-46 |
| MS.gene04921 | MS.gene20816 | -0.806499 | 7.98E-50 | -1.69E-46 |
| MS.gene04921 | MS.gene26474 | 0.804643 | 1.96E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene28077 | 0.805726 | 1.16E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene28334 | -0.808968 | 2.39E-50 | -1.69E-46 |
| MS.gene04921 | MS.gene28603 | 0.803838 | 2.88E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene28802 | 0.828693 | 7.80E-55 | -1.69E-46 |
| MS.gene04921 | MS.gene29927 | -0.814911 | 1.21E-51 | -1.69E-46 |
| MS.gene04921 | MS.gene30456 | 0.820271 | 7.49E-53 | -1.69E-46 |
| MS.gene04921 | MS.gene32652 | -0.805644 | 1.21E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene33980 | 0.811075 | 8.39E-51 | -1.69E-46 |
| MS.gene04921 | MS.gene35081 | 0.804775 | 1.84E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene38118 | 0.828716 | 7.70E-55 | -1.69E-46 |
| MS.gene04921 | MS.gene42301 | -0.818757 | 1.66E-52 | -1.69E-46 |
| MS.gene04921 | MS.gene42884 | -0.80851 | 2.99E-50 | -1.69E-46 |
| MS.gene04921 | MS.gene44024 | 0.801302 | 9.60E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene44440 | -0.811977 | 5.34E-51 | -1.69E-46 |
| MS.gene04921 | MS.gene47902 | 0.802813 | 4.69E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene47989 | -0.801828 | 7.49E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene50072 | 0.815292 | 9.96E-52 | -1.69E-46 |
| MS.gene04921 | MS.gene50620 | 0.809577 | 1.77E-50 | -1.69E-46 |
| MS.gene04921 | MS.gene51887 | -0.811539 | 6.65E-51 | -1.69E-46 |
| MS.gene04921 | MS.gene54068 | -0.81764 | 2.97E-52 | -1.69E-46 |
| MS.gene04921 | MS.gene55082 | 0.807101 | 5.96E-50 | -1.69E-46 |
| MS.gene04921 | MS.gene55731 | -0.816657 | 4.94E-52 | -1.69E-46 |
| MS.gene04921 | MS.gene55899 | 0.812094 | 5.04E-51 | -1.69E-46 |
| MS.gene04921 | MS.gene57291 | 0.842198 | 2.99E-58 | -1.69E-46 |
| MS.gene04921 | MS.gene58329 | 0.823843 | 1.11E-53 | -1.69E-46 |
| MS.gene04921 | MS.gene58466 | -0.813423 | 2.58E-51 | -1.69E-46 |
| MS.gene04921 | MS.gene60408 | 0.802353 | 5.84E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene60712 | -0.821032 | 5.01E-53 | -1.69E-46 |
| MS.gene04921 | MS.gene61145 | -0.800335 | 1.51E-48 | -1.69E-46 |
| MS.gene04921 | MS.gene61244 | 0.811399 | 7.14E-51 | -1.69E-46 |
| MS.gene04921 | MS.gene61299 | 0.821998 | 3.00E-53 | -1.69E-46 |
| MS.gene04921 | MS.gene63663 | 0.811132 | 8.16E-51 | -1.69E-46 |
| MS.gene04921 | MS.gene64791 | 0.80456 | 2.04E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene65822 | 0.810386 | 1.18E-50 | -1.69E-46 |
| MS.gene04921 | MS.gene67462 | 0.800841 | 1.19E-48 | -1.69E-46 |
| MS.gene04921 | MS.gene67656 | -0.80119 | 1.01E-48 | -1.69E-46 |
| MS.gene04921 | MS.gene68226 | 0.802022 | 6.83E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene69450 | -0.819277 | 1.26E-52 | -1.69E-46 |
| MS.gene04921 | MS.gene69468 | -0.81036 | 1.20E-50 | -1.69E-46 |
| MS.gene04921 | MS.gene70804 | 0.800886 | 1.17E-48 | -1.69E-46 |
| MS.gene04921 | MS.gene71621 | -0.822288 | 2.57E-53 | -1.69E-46 |
| MS.gene04921 | MS.gene71976 | 0.822499 | 2.29E-53 | -1.69E-46 |
| MS.gene04921 | MS.gene72287 | -0.800694 | 1.28E-48 | -1.69E-46 |
| MS.gene04921 | MS.gene73545 | -0.803172 | 3.96E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene73688 | 0.807358 | 5.26E-50 | -1.69E-46 |
| MS.gene04921 | MS.gene76883 | 0.808269 | 3.36E-50 | -1.69E-46 |
| MS.gene04921 | MS.gene77774 | 0.812533 | 4.04E-51 | -1.69E-46 |
| MS.gene04921 | MS.gene78942 | -0.809728 | 1.64E-50 | -1.69E-46 |
| MS.gene04921 | MS.gene79858 | 0.800226 | 1.59E-48 | -1.69E-46 |
| MS.gene04921 | MS.gene85136 | -0.803325 | 3.68E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene86293 | -0.821383 | 4.16E-53 | -1.69E-46 |
| MS.gene04921 | MS.gene86914 | -0.802839 | 4.64E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene88896 | -0.819147 | 1.35E-52 | -1.69E-46 |
| MS.gene04921 | MS.gene89722 | -0.817564 | 3.09E-52 | -1.69E-46 |
| MS.gene04921 | MS.gene90210 | 0.825934 | 3.58E-54 | -1.69E-46 |
| MS.gene04921 | MS.gene90819 | 0.866665 | 2.41E-65 | -1.69E-46 |
| MS.gene04921 | MS.gene90966 | 0.810271 | 1.25E-50 | -1.69E-46 |
| MS.gene04921 | MS.gene91317 | 0.818706 | 1.70E-52 | -1.69E-46 |
| MS.gene04921 | MS.gene96701 | 0.818572 | 1.83E-52 | -1.69E-46 |
| MS.gene04921 | MS.gene96836 | 0.802743 | 4.85E-49 | -1.69E-46 |
| MS.gene04921 | MS.gene97191 | 0.816806 | 4.57E-52 | -1.69E-46 |
| MS.gene04921 | MS.gene97340 | 0.862376 | 5.30E-64 | -1.69E-46 |
| MS.gene04921 | MS.gene97437 | 0.812092 | 5.04E-51 | -1.69E-46 |
| MS.gene04921 | MS.gene97726 | -0.817181 | 3.77E-52 | -1.69E-46 |
| MS.gene04921 | MS.gene99553 | 0.827124 | 1.86E-54 | -1.69E-46 |
| MS.gene04921 | MS.gene99603 | 0.820406 | 6.98E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04921.t1 | MTR_3g067510 | 85.211 | 142 | 13 | 2 | 1 | 141 | 1 | 135 | 1.29e-84 | 244 |
| MS.gene04921.t1 | MTR_3g067510 | 81.690 | 142 | 13 | 3 | 1 | 141 | 1 | 130 | 9.47e-79 | 229 |
| MS.gene04921.t1 | MTR_3g067580 | 78.014 | 141 | 26 | 1 | 1 | 141 | 9 | 144 | 7.98e-78 | 227 |
| MS.gene04921.t1 | MTR_3g067430 | 52.381 | 147 | 57 | 4 | 1 | 141 | 1 | 140 | 1.10e-44 | 143 |
| MS.gene04921.t1 | MTR_3g067270 | 53.623 | 138 | 55 | 3 | 1 | 137 | 1 | 130 | 3.57e-42 | 136 |
| MS.gene04921.t1 | MTR_3g467750 | 53.623 | 138 | 55 | 3 | 1 | 137 | 1 | 130 | 3.57e-42 | 136 |
| MS.gene04921.t1 | MTR_3g067280 | 52.899 | 138 | 56 | 3 | 1 | 137 | 1 | 130 | 6.58e-42 | 136 |
| MS.gene04921.t1 | MTR_3g067540 | 50.000 | 148 | 59 | 4 | 1 | 141 | 1 | 140 | 1.23e-41 | 135 |
| MS.gene04921.t1 | MTR_3g067555 | 50.000 | 148 | 59 | 4 | 1 | 141 | 1 | 140 | 1.23e-41 | 135 |
| MS.gene04921.t1 | MTR_3g067437 | 54.815 | 135 | 54 | 3 | 1 | 134 | 1 | 129 | 1.61e-41 | 134 |
| MS.gene04921.t1 | MTR_3g467760 | 47.445 | 137 | 41 | 2 | 1 | 137 | 1 | 106 | 6.44e-37 | 122 |
| MS.gene04921.t1 | MTR_3g067555 | 50.794 | 126 | 52 | 3 | 23 | 141 | 5 | 127 | 1.24e-36 | 122 |
| MS.gene04921.t1 | MTR_3g067500 | 53.043 | 115 | 53 | 1 | 27 | 141 | 1 | 114 | 3.92e-36 | 120 |
| MS.gene04921.t1 | MTR_3g067535 | 47.945 | 146 | 61 | 7 | 1 | 141 | 1 | 136 | 6.73e-36 | 120 |
| MS.gene04921.t1 | MTR_3g067550 | 50.820 | 122 | 50 | 3 | 27 | 141 | 1 | 119 | 1.37e-34 | 117 |
| MS.gene04921.t1 | MTR_3g067555 | 50.820 | 122 | 50 | 3 | 27 | 141 | 1 | 119 | 1.37e-34 | 117 |
| MS.gene04921.t1 | MTR_3g067445 | 50.000 | 124 | 49 | 4 | 1 | 118 | 1 | 117 | 4.73e-33 | 113 |
| MS.gene04921.t1 | MTR_3g463570 | 43.662 | 142 | 71 | 4 | 1 | 140 | 1 | 135 | 5.59e-31 | 108 |
| MS.gene04921.t1 | MTR_6g036620 | 47.183 | 142 | 66 | 4 | 1 | 141 | 1 | 134 | 1.38e-30 | 107 |
| MS.gene04921.t1 | MTR_3g067570 | 60.000 | 95 | 35 | 2 | 27 | 121 | 1 | 92 | 1.46e-30 | 105 |
| MS.gene04921.t1 | MTR_7g056803 | 41.259 | 143 | 77 | 3 | 1 | 141 | 1 | 138 | 4.34e-29 | 103 |
| MS.gene04921.t1 | MTR_3g463570 | 41.322 | 121 | 68 | 2 | 22 | 141 | 38 | 156 | 7.35e-26 | 95.9 |
| MS.gene04921.t1 | MTR_6g017150 | 44.681 | 141 | 66 | 8 | 1 | 137 | 1 | 133 | 7.55e-26 | 95.5 |
| MS.gene04921.t1 | MTR_6g047880 | 39.286 | 140 | 75 | 4 | 1 | 137 | 1 | 133 | 4.19e-25 | 93.6 |
| MS.gene04921.t1 | MTR_3g436100 | 37.580 | 157 | 73 | 6 | 1 | 139 | 1 | 150 | 6.14e-25 | 93.6 |
| MS.gene04921.t1 | MTR_6g017170 | 42.400 | 125 | 61 | 4 | 1 | 122 | 1 | 117 | 1.94e-24 | 91.3 |
| MS.gene04921.t1 | MTR_8g022430 | 41.135 | 141 | 71 | 6 | 1 | 137 | 1 | 133 | 2.02e-24 | 91.7 |
| MS.gene04921.t1 | MTR_6g047900 | 40.288 | 139 | 72 | 5 | 1 | 137 | 1 | 130 | 2.52e-24 | 91.3 |
| MS.gene04921.t1 | MTR_7g056817 | 37.931 | 145 | 80 | 4 | 1 | 141 | 1 | 139 | 7.87e-24 | 90.1 |
| MS.gene04921.t1 | MTR_7g044980 | 38.411 | 151 | 71 | 4 | 1 | 139 | 1 | 141 | 3.82e-22 | 85.9 |
| MS.gene04921.t1 | MTR_3g067830 | 45.946 | 111 | 46 | 5 | 1 | 105 | 1 | 103 | 9.08e-22 | 84.0 |
| MS.gene04921.t1 | MTR_7g044920 | 39.103 | 156 | 70 | 6 | 1 | 139 | 1 | 148 | 1.52e-21 | 84.7 |
| MS.gene04921.t1 | MTR_1g019650 | 40.625 | 128 | 57 | 5 | 1 | 127 | 1 | 110 | 2.07e-21 | 83.2 |
| MS.gene04921.t1 | MTR_8g022400 | 40.000 | 140 | 73 | 6 | 1 | 137 | 1 | 132 | 2.37e-21 | 84.0 |
| MS.gene04921.t1 | MTR_8g022420 | 41.727 | 139 | 66 | 8 | 1 | 134 | 1 | 129 | 2.49e-21 | 84.0 |
| MS.gene04921.t1 | MTR_8g461020 | 39.640 | 111 | 61 | 3 | 14 | 122 | 10 | 116 | 2.88e-21 | 83.6 |
| MS.gene04921.t1 | MTR_4g026590 | 39.394 | 132 | 58 | 5 | 20 | 137 | 16 | 139 | 1.82e-19 | 79.3 |
| MS.gene04921.t1 | MTR_7g029540 | 36.434 | 129 | 72 | 5 | 1 | 126 | 1 | 122 | 3.54e-16 | 70.1 |
| MS.gene04921.t1 | MTR_8g056800 | 42.667 | 75 | 42 | 1 | 62 | 136 | 9 | 82 | 6.34e-14 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 23 sgRNAs with CRISPR-Local
Find 37 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAATTCTGATATCAAATA+TGG | 0.235651 | 3.4:+67752800 | MS.gene04921:CDS |
| CCATATTTGATATCAGAATT+AGG | 0.279617 | 3.4:-67752800 | None:intergenic |
| GTCTTCTTGCTTGCTGTATT+CGG | 0.286162 | 3.4:+67752254 | MS.gene04921:CDS |
| ACGGATGCTTTGACTCTTCC+TGG | 0.296264 | 3.4:+67752665 | MS.gene04921:CDS |
| ATCAATCAATGGCTAATGTT+AGG | 0.420426 | 3.4:+67752216 | None:intergenic |
| ACTTACTTCTATTGAAAAGA+AGG | 0.442919 | 3.4:+67752700 | MS.gene04921:CDS |
| GCATGAGACCAACATAAGTT+AGG | 0.446047 | 3.4:-67752734 | None:intergenic |
| TTCTCGATGAAGAAAATAGA+AGG | 0.459780 | 3.4:+67752569 | MS.gene04921:CDS |
| ATGCTTTGACTCTTCCTGGC+TGG | 0.478086 | 3.4:+67752669 | MS.gene04921:CDS |
| GTAAGTGTGGCGCACCAGCC+AGG | 0.501795 | 3.4:-67752683 | None:intergenic |
| GTCTTCTGCTTCAGAGATAG+AGG | 0.504252 | 3.4:-67752834 | None:intergenic |
| TCATGCTGAATGCATAAGAA+AGG | 0.509862 | 3.4:+67752751 | MS.gene04921:CDS |
| AAAATAGAAGGAGCAAAGTG+TGG | 0.520085 | 3.4:+67752581 | MS.gene04921:CDS |
| AAATAGAAGGAGCAAAGTGT+GGG | 0.528749 | 3.4:+67752582 | MS.gene04921:CDS |
| TTCTATTGAAAAGAAGGTTG+AGG | 0.541325 | 3.4:+67752706 | MS.gene04921:CDS |
| TGGTTGTCGTTGCTTTGTCA+CGG | 0.545803 | 3.4:+67752646 | MS.gene04921:CDS |
| AGGAACTACCTAACTTATGT+TGG | 0.546452 | 3.4:+67752726 | MS.gene04921:CDS |
| CATGCTGAATGCATAAGAAA+GGG | 0.550324 | 3.4:+67752752 | MS.gene04921:CDS |
| AATGCATAAGAAAGGGTAGT+GGG | 0.610428 | 3.4:+67752759 | MS.gene04921:CDS |
| AGCAGAAGACTCATTCAAGA+TGG | 0.618191 | 3.4:+67752847 | MS.gene04921:CDS |
| AATAGAAGGAGCAAAGTGTG+GGG | 0.621188 | 3.4:+67752583 | MS.gene04921:CDS |
| GAATGCATAAGAAAGGGTAG+TGG | 0.639235 | 3.4:+67752758 | MS.gene04921:CDS |
| AGAAGGAGCAAAGTGTGGGG+AGG | 0.684675 | 3.4:+67752586 | MS.gene04921:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTTTTTTTTTTTAATTAG+CGG | - | chr3.4:67752401-67752420 | None:intergenic | 10.0% |
| !! | AATGCAAGAATGATATATAT+TGG | - | chr3.4:67752304-67752323 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTAATTAGCGG+AGG | - | chr3.4:67752398-67752417 | None:intergenic | 20.0% |
| ! | ACTTACTTCTATTGAAAAGA+AGG | + | chr3.4:67752700-67752719 | MS.gene04921:CDS | 25.0% |
| ! | CCATATTTGATATCAGAATT+AGG | - | chr3.4:67752803-67752822 | None:intergenic | 25.0% |
| ! | CCTAATTCTGATATCAAATA+TGG | + | chr3.4:67752800-67752819 | MS.gene04921:CDS | 25.0% |
| ACCCATTATCATATCATATG+TGG | + | chr3.4:67752351-67752370 | MS.gene04921:intron | 30.0% | |
| GCCACATATGATATGATAAT+GGG | - | chr3.4:67752355-67752374 | None:intergenic | 30.0% | |
| TGCCACATATGATATGATAA+TGG | - | chr3.4:67752356-67752375 | None:intergenic | 30.0% | |
| TTACCCACAAAATTTAGCAA+CGG | + | chr3.4:67752424-67752443 | MS.gene04921:intron | 30.0% | |
| TTCTATTGAAAAGAAGGTTG+AGG | + | chr3.4:67752706-67752725 | MS.gene04921:CDS | 30.0% | |
| TTCTCGATGAAGAAAATAGA+AGG | + | chr3.4:67752569-67752588 | MS.gene04921:CDS | 30.0% | |
| ! | ATTTCCGTTGCTAAATTTTG+TGG | - | chr3.4:67752431-67752450 | None:intergenic | 30.0% |
| ! | CTTTTCAATAGAAGTAAGTG+TGG | - | chr3.4:67752699-67752718 | None:intergenic | 30.0% |
| ! | TTTCCGTTGCTAAATTTTGT+GGG | - | chr3.4:67752430-67752449 | None:intergenic | 30.0% |
| AAAATAGAAGGAGCAAAGTG+TGG | + | chr3.4:67752581-67752600 | MS.gene04921:CDS | 35.0% | |
| AAATAGAAGGAGCAAAGTGT+GGG | + | chr3.4:67752582-67752601 | MS.gene04921:CDS | 35.0% | |
| AATGCATAAGAAAGGGTAGT+GGG | + | chr3.4:67752759-67752778 | MS.gene04921:CDS | 35.0% | |
| AGGAACTACCTAACTTATGT+TGG | + | chr3.4:67752726-67752745 | MS.gene04921:CDS | 35.0% | |
| CATGCTGAATGCATAAGAAA+GGG | + | chr3.4:67752752-67752771 | MS.gene04921:CDS | 35.0% | |
| TCATGCTGAATGCATAAGAA+AGG | + | chr3.4:67752751-67752770 | MS.gene04921:CDS | 35.0% | |
| !! | CAATTTAATTTTTGCGACGC+TGG | + | chr3.4:67752620-67752639 | MS.gene04921:CDS | 35.0% |
| AATAGAAGGAGCAAAGTGTG+GGG | + | chr3.4:67752583-67752602 | MS.gene04921:CDS | 40.0% | |
| AGCAGAAGACTCATTCAAGA+TGG | + | chr3.4:67752847-67752866 | MS.gene04921:CDS | 40.0% | |
| GAATGCATAAGAAAGGGTAG+TGG | + | chr3.4:67752758-67752777 | MS.gene04921:CDS | 40.0% | |
| GCATGAGACCAACATAAGTT+AGG | - | chr3.4:67752737-67752756 | None:intergenic | 40.0% | |
| !! | GTCTTCTTGCTTGCTGTATT+CGG | + | chr3.4:67752254-67752273 | MS.gene04921:CDS | 40.0% |
| !! | TTTTAATTAGCGGAGGACAG+AGG | - | chr3.4:67752391-67752410 | None:intergenic | 40.0% |
| GTCTTCTGCTTCAGAGATAG+AGG | - | chr3.4:67752837-67752856 | None:intergenic | 45.0% | |
| ! | AATTTTTGCGACGCTGGTGA+TGG | + | chr3.4:67752626-67752645 | MS.gene04921:CDS | 45.0% |
| ! | TGGTTGTCGTTGCTTTGTCA+CGG | + | chr3.4:67752646-67752665 | MS.gene04921:CDS | 45.0% |
| !! | TTATTCTTATAATATAATAA+TGG | + | chr3.4:67752497-67752516 | MS.gene04921:intron | 5.0% |
| ACGGATGCTTTGACTCTTCC+TGG | + | chr3.4:67752665-67752684 | MS.gene04921:CDS | 50.0% | |
| ATGCTTTGACTCTTCCTGGC+TGG | + | chr3.4:67752669-67752688 | MS.gene04921:CDS | 50.0% | |
| AGAAGGAGCAAAGTGTGGGG+AGG | + | chr3.4:67752586-67752605 | MS.gene04921:CDS | 55.0% | |
| TAGCGGAGGACAGAGGCAAG+CGG | - | chr3.4:67752384-67752403 | None:intergenic | 60.0% | |
| GTAAGTGTGGCGCACCAGCC+AGG | - | chr3.4:67752686-67752705 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 67752224 | 67752922 | 67752224 | ID=MS.gene04921 |
| chr3.4 | mRNA | 67752224 | 67752922 | 67752224 | ID=MS.gene04921.t1;Parent=MS.gene04921 |
| chr3.4 | exon | 67752224 | 67752275 | 67752224 | ID=MS.gene04921.t1.exon1;Parent=MS.gene04921.t1 |
| chr3.4 | CDS | 67752224 | 67752275 | 67752224 | ID=cds.MS.gene04921.t1;Parent=MS.gene04921.t1 |
| chr3.4 | exon | 67752549 | 67752922 | 67752549 | ID=MS.gene04921.t1.exon2;Parent=MS.gene04921.t1 |
| chr3.4 | CDS | 67752549 | 67752922 | 67752549 | ID=cds.MS.gene04921.t1;Parent=MS.gene04921.t1 |
| Gene Sequence |
| Protein sequence |
