Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97721.t1 | XP_003593643.1 | 92.7 | 341 | 12 | 1 | 1 | 328 | 1 | 341 | 2.20E-157 | 565.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97721.t1 | Q9D832 | 38.8 | 338 | 183 | 7 | 1 | 325 | 1 | 327 | 1.3e-54 | 214.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97721.t1 | A2Q503 | 92.7 | 341 | 12 | 1 | 1 | 328 | 1 | 341 | 1.6e-157 | 565.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049824 | MS.gene97721 | 0.811108 | 8.25E-51 | -1.69E-46 |
| MS.gene049825 | MS.gene97721 | 0.8176 | 3.03E-52 | -1.69E-46 |
| MS.gene049873 | MS.gene97721 | 0.808652 | 2.79E-50 | -1.69E-46 |
| MS.gene050026 | MS.gene97721 | 0.805437 | 1.34E-49 | -1.69E-46 |
| MS.gene050355 | MS.gene97721 | 0.803988 | 2.68E-49 | -1.69E-46 |
| MS.gene050559 | MS.gene97721 | 0.801615 | 8.28E-49 | -1.69E-46 |
| MS.gene050561 | MS.gene97721 | 0.801801 | 7.59E-49 | -1.69E-46 |
| MS.gene051594 | MS.gene97721 | 0.809123 | 2.21E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene97721 | 0.804088 | 2.55E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene97721 | 0.804264 | 2.35E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene97721 | 0.824931 | 6.18E-54 | -1.69E-46 |
| MS.gene052582 | MS.gene97721 | 0.803106 | 4.08E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene97721 | 0.816762 | 4.68E-52 | -1.69E-46 |
| MS.gene052867 | MS.gene97721 | 0.807556 | 4.77E-50 | -1.69E-46 |
| MS.gene053221 | MS.gene97721 | 0.807042 | 6.13E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene97721 | 0.820918 | 5.32E-53 | -1.69E-46 |
| MS.gene054651 | MS.gene97721 | 0.809087 | 2.25E-50 | -1.69E-46 |
| MS.gene055166 | MS.gene97721 | 0.804167 | 2.46E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene97721 | 0.813148 | 2.96E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene97721 | 0.806085 | 9.76E-50 | -1.69E-46 |
| MS.gene056366 | MS.gene97721 | 0.815534 | 8.80E-52 | -1.69E-46 |
| MS.gene056506 | MS.gene97721 | 0.800886 | 1.17E-48 | -1.69E-46 |
| MS.gene057060 | MS.gene97721 | 0.817862 | 2.65E-52 | -1.69E-46 |
| MS.gene058037 | MS.gene97721 | 0.833656 | 4.70E-56 | -1.69E-46 |
| MS.gene058625 | MS.gene97721 | 0.827105 | 1.88E-54 | -1.69E-46 |
| MS.gene058979 | MS.gene97721 | 0.81627 | 6.03E-52 | -1.69E-46 |
| MS.gene05954 | MS.gene97721 | 0.812465 | 4.18E-51 | -1.69E-46 |
| MS.gene059625 | MS.gene97721 | 0.810794 | 9.66E-51 | -1.69E-46 |
| MS.gene060521 | MS.gene97721 | 0.803274 | 3.77E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97721.t1 | MTR_2g014480 | 92.669 | 341 | 12 | 1 | 1 | 328 | 1 | 341 | 0.0 | 652 |
| MS.gene97721.t1 | MTR_2g014470 | 64.412 | 340 | 93 | 6 | 1 | 323 | 1 | 329 | 8.15e-140 | 399 |
| MS.gene97721.t1 | MTR_4g078850 | 60.116 | 346 | 109 | 6 | 1 | 326 | 1 | 337 | 5.17e-135 | 387 |
| MS.gene97721.t1 | MTR_4g015840 | 57.478 | 341 | 121 | 5 | 1 | 326 | 1 | 332 | 5.31e-126 | 364 |
| MS.gene97721.t1 | MTR_2g090705 | 56.140 | 342 | 120 | 5 | 1 | 326 | 1 | 328 | 7.91e-120 | 348 |
| MS.gene97721.t1 | MTR_3g108020 | 48.060 | 335 | 143 | 7 | 1 | 323 | 1 | 316 | 1.95e-96 | 288 |
| MS.gene97721.t1 | MTR_4g015840 | 55.510 | 245 | 85 | 5 | 97 | 326 | 20 | 255 | 2.02e-77 | 238 |
| MS.gene97721.t1 | MTR_5g037880 | 45.181 | 166 | 79 | 2 | 169 | 323 | 101 | 265 | 6.85e-45 | 155 |
| MS.gene97721.t1 | MTR_5g037880 | 53.333 | 75 | 28 | 1 | 4 | 71 | 5 | 79 | 1.17e-17 | 82.0 |
| MS.gene97721.t1 | MTR_8g006430 | 30.571 | 350 | 191 | 11 | 5 | 319 | 15 | 347 | 6.72e-35 | 132 |
| MS.gene97721.t1 | MTR_3g088140 | 41.071 | 168 | 86 | 3 | 163 | 318 | 173 | 339 | 2.67e-34 | 129 |
| MS.gene97721.t1 | MTR_3g437840 | 41.290 | 155 | 79 | 2 | 183 | 326 | 2 | 155 | 5.27e-33 | 120 |
| MS.gene97721.t1 | MTR_2g006890 | 40.698 | 172 | 91 | 3 | 163 | 323 | 195 | 366 | 8.03e-32 | 122 |
| MS.gene97721.t1 | MTR_7g109340 | 28.994 | 338 | 199 | 9 | 5 | 327 | 27 | 338 | 1.74e-29 | 115 |
| MS.gene97721.t1 | MTR_3g437850 | 32.857 | 210 | 85 | 5 | 3 | 199 | 1 | 167 | 1.99e-25 | 100 |
| MS.gene97721.t1 | MTR_3g087030 | 26.761 | 355 | 206 | 14 | 4 | 323 | 82 | 417 | 1.05e-21 | 95.5 |
| MS.gene97721.t1 | MTR_7g101070 | 58.462 | 65 | 27 | 0 | 4 | 68 | 358 | 422 | 8.83e-19 | 87.0 |
| MS.gene97721.t1 | MTR_3g437360 | 52.055 | 73 | 35 | 0 | 3 | 75 | 4 | 76 | 1.17e-17 | 82.8 |
| MS.gene97721.t1 | MTR_2g104030 | 54.667 | 75 | 32 | 1 | 4 | 78 | 70 | 142 | 3.12e-17 | 82.8 |
| MS.gene97721.t1 | MTR_4g050420 | 27.189 | 217 | 113 | 7 | 120 | 320 | 157 | 344 | 3.46e-16 | 79.3 |
| MS.gene97721.t1 | MTR_4g050420 | 57.746 | 71 | 25 | 1 | 5 | 75 | 14 | 79 | 8.59e-12 | 65.9 |
| MS.gene97721.t1 | MTR_5g065160 | 27.011 | 348 | 206 | 15 | 4 | 321 | 76 | 405 | 4.55e-16 | 79.0 |
| MS.gene97721.t1 | MTR_5g065160 | 26.857 | 350 | 204 | 15 | 4 | 321 | 83 | 412 | 4.93e-16 | 79.0 |
| MS.gene97721.t1 | MTR_5g065160 | 26.857 | 350 | 204 | 15 | 4 | 321 | 82 | 411 | 4.96e-16 | 79.0 |
| MS.gene97721.t1 | MTR_5g065160 | 27.011 | 348 | 206 | 15 | 4 | 321 | 83 | 412 | 4.98e-16 | 79.0 |
| MS.gene97721.t1 | MTR_2g087660 | 27.442 | 215 | 115 | 6 | 120 | 320 | 159 | 346 | 6.21e-16 | 78.6 |
| MS.gene97721.t1 | MTR_2g087660 | 59.155 | 71 | 24 | 1 | 5 | 75 | 14 | 79 | 5.63e-13 | 69.7 |
| MS.gene97721.t1 | MTR_5g065860 | 54.688 | 64 | 28 | 1 | 4 | 67 | 48 | 110 | 1.24e-15 | 73.2 |
| MS.gene97721.t1 | MTR_8g022310 | 47.826 | 69 | 31 | 1 | 4 | 67 | 10 | 78 | 1.65e-15 | 74.7 |
| MS.gene97721.t1 | MTR_8g022310 | 47.826 | 69 | 31 | 1 | 4 | 67 | 10 | 78 | 1.68e-15 | 74.7 |
| MS.gene97721.t1 | MTR_8g022310 | 47.826 | 69 | 31 | 1 | 4 | 67 | 10 | 78 | 2.20e-15 | 73.9 |
| MS.gene97721.t1 | MTR_8g022310 | 47.826 | 69 | 31 | 1 | 4 | 67 | 10 | 78 | 2.29e-15 | 74.7 |
| MS.gene97721.t1 | MTR_7g112360 | 46.970 | 66 | 32 | 1 | 5 | 67 | 17 | 82 | 4.94e-15 | 70.9 |
| MS.gene97721.t1 | MTR_7g112360 | 46.970 | 66 | 32 | 1 | 5 | 67 | 17 | 82 | 5.98e-15 | 72.0 |
| MS.gene97721.t1 | MTR_3g027580 | 47.368 | 76 | 39 | 1 | 1 | 76 | 86 | 160 | 3.25e-14 | 73.6 |
| MS.gene97721.t1 | MTR_1g110310 | 49.296 | 71 | 35 | 1 | 4 | 74 | 16 | 85 | 4.73e-14 | 72.8 |
| MS.gene97721.t1 | MTR_6g027110 | 44.928 | 69 | 34 | 1 | 3 | 67 | 1 | 69 | 4.77e-14 | 68.9 |
| MS.gene97721.t1 | MTR_1g029460 | 45.333 | 75 | 40 | 1 | 3 | 77 | 5 | 78 | 4.95e-14 | 72.8 |
| MS.gene97721.t1 | MTR_5g012530 | 42.857 | 77 | 42 | 1 | 4 | 78 | 12 | 88 | 8.40e-14 | 72.4 |
| MS.gene97721.t1 | MTR_4g085070 | 50.000 | 60 | 27 | 1 | 11 | 67 | 19 | 78 | 1.94e-13 | 67.4 |
| MS.gene97721.t1 | MTR_7g092380 | 30.387 | 181 | 110 | 7 | 6 | 176 | 24 | 198 | 3.37e-13 | 69.3 |
| MS.gene97721.t1 | MTR_2g087660 | 59.155 | 71 | 24 | 1 | 5 | 75 | 14 | 79 | 3.51e-13 | 69.7 |
| MS.gene97721.t1 | MTR_4g023470 | 46.053 | 76 | 40 | 1 | 1 | 76 | 83 | 157 | 3.53e-13 | 70.5 |
| MS.gene97721.t1 | MTR_6g027030 | 44.928 | 69 | 34 | 1 | 3 | 67 | 1 | 69 | 4.57e-13 | 67.8 |
| MS.gene97721.t1 | MTR_5g035770 | 50.746 | 67 | 32 | 1 | 4 | 70 | 25 | 90 | 9.17e-13 | 68.9 |
| MS.gene97721.t1 | MTR_1g029470 | 44.595 | 74 | 40 | 1 | 4 | 77 | 6 | 78 | 2.01e-12 | 67.8 |
| MS.gene97721.t1 | MTR_7g069480 | 46.377 | 69 | 35 | 1 | 3 | 71 | 26 | 92 | 2.62e-12 | 67.8 |
| MS.gene97721.t1 | MTR_6g026940 | 42.029 | 69 | 36 | 1 | 3 | 67 | 1 | 69 | 5.23e-12 | 63.9 |
| MS.gene97721.t1 | MTR_1g052110 | 40.449 | 89 | 46 | 3 | 6 | 91 | 40 | 124 | 6.15e-12 | 65.5 |
| MS.gene97721.t1 | MTR_5g004570 | 40.541 | 74 | 43 | 1 | 4 | 77 | 6 | 78 | 2.43e-11 | 63.5 |
| MS.gene97721.t1 | MTR_6g471050 | 38.806 | 134 | 53 | 7 | 30 | 157 | 7 | 117 | 6.54e-11 | 63.5 |
| MS.gene97721.t1 | MTR_2g436560 | 37.097 | 124 | 63 | 5 | 4 | 120 | 104 | 219 | 8.00e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97721.t1 | AT2G20560 | 57.514 | 346 | 111 | 5 | 1 | 326 | 1 | 330 | 4.42e-131 | 377 |
| MS.gene97721.t1 | AT3G08910 | 57.567 | 337 | 109 | 6 | 1 | 326 | 1 | 314 | 1.13e-124 | 360 |
| MS.gene97721.t1 | AT4G28480 | 57.429 | 350 | 116 | 6 | 1 | 326 | 1 | 341 | 3.25e-123 | 357 |
| MS.gene97721.t1 | AT5G01390 | 55.685 | 343 | 119 | 6 | 1 | 326 | 1 | 327 | 1.61e-122 | 355 |
| MS.gene97721.t1 | AT5G25530 | 51.026 | 341 | 142 | 7 | 1 | 326 | 1 | 331 | 3.39e-109 | 322 |
| MS.gene97721.t1 | AT5G25530 | 49.857 | 349 | 142 | 8 | 1 | 326 | 1 | 339 | 2.97e-106 | 314 |
| MS.gene97721.t1 | AT1G10350 | 47.337 | 338 | 162 | 5 | 1 | 323 | 1 | 337 | 8.14e-98 | 293 |
| MS.gene97721.t1 | AT4G28480 | 49.263 | 339 | 103 | 7 | 1 | 326 | 1 | 283 | 3.10e-93 | 279 |
| MS.gene97721.t1 | AT1G59725 | 47.661 | 342 | 143 | 6 | 1 | 326 | 1 | 322 | 6.13e-93 | 280 |
| MS.gene97721.t1 | AT3G47940 | 44.722 | 360 | 139 | 8 | 1 | 323 | 1 | 337 | 3.68e-90 | 273 |
| MS.gene97721.t1 | AT5G01390 | 44.643 | 336 | 109 | 5 | 1 | 326 | 1 | 269 | 9.97e-81 | 247 |
| MS.gene97721.t1 | AT2G20550 | 47.312 | 279 | 91 | 5 | 100 | 326 | 3 | 277 | 2.72e-67 | 213 |
| MS.gene97721.t1 | AT2G20550 | 47.312 | 279 | 91 | 5 | 100 | 326 | 3 | 277 | 2.72e-67 | 213 |
| MS.gene97721.t1 | AT5G01390 | 53.081 | 211 | 76 | 5 | 1 | 204 | 1 | 195 | 7.68e-65 | 204 |
| MS.gene97721.t1 | AT5G01390 | 63.934 | 122 | 43 | 1 | 1 | 122 | 1 | 121 | 1.67e-46 | 157 |
| MS.gene97721.t1 | AT5G01390 | 51.181 | 127 | 33 | 2 | 200 | 326 | 133 | 230 | 1.26e-29 | 113 |
| MS.gene97721.t1 | AT1G44160 | 36.408 | 206 | 112 | 3 | 133 | 327 | 151 | 348 | 7.55e-31 | 119 |
| MS.gene97721.t1 | AT1G11040 | 36.559 | 186 | 103 | 3 | 151 | 326 | 246 | 426 | 9.18e-31 | 120 |
| MS.gene97721.t1 | AT3G44110 | 29.121 | 364 | 178 | 9 | 5 | 320 | 15 | 346 | 1.13e-30 | 120 |
| MS.gene97721.t1 | AT5G22060 | 31.250 | 368 | 166 | 13 | 5 | 320 | 15 | 347 | 5.04e-30 | 118 |
| MS.gene97721.t1 | AT3G44110 | 28.653 | 349 | 169 | 9 | 5 | 305 | 15 | 331 | 9.25e-26 | 105 |
| MS.gene97721.t1 | AT3G62600 | 27.778 | 342 | 192 | 11 | 2 | 320 | 24 | 333 | 2.16e-23 | 99.4 |
| MS.gene97721.t1 | AT2G22360 | 27.066 | 351 | 209 | 13 | 4 | 323 | 86 | 420 | 3.08e-20 | 91.3 |
| MS.gene97721.t1 | AT4G39960 | 52.326 | 86 | 38 | 2 | 4 | 88 | 85 | 168 | 1.34e-19 | 89.4 |
| MS.gene97721.t1 | AT4G39960 | 52.326 | 86 | 38 | 2 | 4 | 88 | 85 | 168 | 1.34e-19 | 89.4 |
| MS.gene97721.t1 | AT1G80030 | 52.941 | 85 | 35 | 2 | 4 | 88 | 75 | 154 | 1.38e-18 | 86.7 |
| MS.gene97721.t1 | AT1G80030 | 52.941 | 85 | 35 | 2 | 4 | 88 | 75 | 154 | 1.91e-18 | 86.3 |
| MS.gene97721.t1 | AT1G80030 | 52.941 | 85 | 35 | 2 | 4 | 88 | 75 | 154 | 1.91e-18 | 86.3 |
| MS.gene97721.t1 | AT1G80030 | 52.941 | 85 | 35 | 2 | 4 | 88 | 75 | 154 | 1.91e-18 | 86.3 |
| MS.gene97721.t1 | AT2G41000 | 44.444 | 90 | 44 | 2 | 3 | 88 | 2 | 89 | 6.59e-18 | 81.3 |
| MS.gene97721.t1 | AT2G41000 | 44.444 | 90 | 44 | 2 | 3 | 88 | 2 | 89 | 1.34e-17 | 79.7 |
| MS.gene97721.t1 | AT3G17830 | 50.000 | 86 | 37 | 2 | 2 | 85 | 61 | 142 | 1.80e-17 | 83.6 |
| MS.gene97721.t1 | AT5G48030 | 51.389 | 72 | 34 | 1 | 4 | 75 | 94 | 164 | 9.34e-16 | 78.2 |
| MS.gene97721.t1 | AT1G56300 | 51.515 | 66 | 29 | 1 | 5 | 67 | 14 | 79 | 1.06e-15 | 72.8 |
| MS.gene97721.t1 | AT1G56300 | 51.515 | 66 | 29 | 1 | 5 | 67 | 14 | 79 | 1.07e-15 | 73.9 |
| MS.gene97721.t1 | AT1G59980 | 49.275 | 69 | 34 | 1 | 6 | 74 | 25 | 92 | 1.11e-15 | 77.4 |
| MS.gene97721.t1 | AT1G59980 | 49.275 | 69 | 34 | 1 | 6 | 74 | 25 | 92 | 1.86e-15 | 77.0 |
| MS.gene97721.t1 | AT5G03160 | 50.769 | 65 | 32 | 0 | 4 | 68 | 370 | 434 | 5.38e-15 | 75.9 |
| MS.gene97721.t1 | AT1G68370 | 52.113 | 71 | 33 | 1 | 4 | 74 | 17 | 86 | 5.64e-15 | 75.5 |
| MS.gene97721.t1 | AT5G16650 | 55.224 | 67 | 29 | 1 | 4 | 70 | 11 | 76 | 7.99e-15 | 71.6 |
| MS.gene97721.t1 | AT5G16650 | 56.250 | 64 | 27 | 1 | 4 | 67 | 11 | 73 | 9.45e-15 | 70.5 |
| MS.gene97721.t1 | AT2G21510 | 47.297 | 74 | 38 | 1 | 4 | 77 | 6 | 78 | 1.51e-13 | 70.9 |
| MS.gene97721.t1 | AT2G21510 | 47.297 | 74 | 38 | 1 | 4 | 77 | 6 | 78 | 1.51e-13 | 70.9 |
| MS.gene97721.t1 | AT2G21510 | 47.297 | 74 | 38 | 1 | 4 | 77 | 6 | 78 | 1.81e-13 | 70.9 |
| MS.gene97721.t1 | AT2G21510 | 47.297 | 74 | 38 | 1 | 4 | 77 | 6 | 78 | 1.81e-13 | 70.9 |
| MS.gene97721.t1 | AT2G21510 | 47.297 | 74 | 38 | 1 | 4 | 77 | 6 | 78 | 2.39e-13 | 70.1 |
| MS.gene97721.t1 | AT5G06910 | 49.231 | 65 | 32 | 1 | 6 | 70 | 31 | 94 | 3.51e-13 | 69.3 |
| MS.gene97721.t1 | AT2G33735 | 44.615 | 65 | 35 | 1 | 4 | 68 | 22 | 85 | 3.73e-13 | 65.9 |
| MS.gene97721.t1 | AT2G33735 | 44.615 | 65 | 35 | 1 | 4 | 68 | 22 | 85 | 3.73e-13 | 65.9 |
| MS.gene97721.t1 | AT1G24120 | 44.595 | 74 | 40 | 1 | 4 | 77 | 20 | 92 | 2.49e-12 | 67.8 |
| MS.gene97721.t1 | AT2G35720 | 42.667 | 75 | 41 | 1 | 4 | 76 | 15 | 89 | 5.65e-12 | 67.0 |
| MS.gene97721.t1 | AT4G39150 | 43.243 | 74 | 41 | 1 | 4 | 77 | 6 | 78 | 7.10e-12 | 65.9 |
| MS.gene97721.t1 | AT4G39150 | 43.243 | 74 | 41 | 1 | 4 | 77 | 6 | 78 | 7.10e-12 | 65.9 |
| MS.gene97721.t1 | AT4G39150 | 43.243 | 74 | 41 | 1 | 4 | 77 | 6 | 78 | 7.10e-12 | 65.9 |
| MS.gene97721.t1 | AT4G13830 | 41.791 | 67 | 38 | 1 | 3 | 68 | 65 | 131 | 7.33e-12 | 63.2 |
| MS.gene97721.t1 | AT4G13830 | 41.791 | 67 | 38 | 1 | 3 | 68 | 65 | 131 | 9.31e-12 | 63.5 |
| MS.gene97721.t1 | AT3G12170 | 27.841 | 176 | 117 | 4 | 6 | 174 | 13 | 185 | 1.01e-11 | 64.7 |
| MS.gene97721.t1 | AT1G71000 | 45.455 | 66 | 33 | 1 | 5 | 67 | 9 | 74 | 1.30e-11 | 62.8 |
| MS.gene97721.t1 | AT3G12170 | 27.841 | 176 | 117 | 4 | 6 | 174 | 49 | 221 | 1.36e-11 | 64.7 |
| MS.gene97721.t1 | AT1G71000 | 45.455 | 66 | 33 | 1 | 5 | 67 | 9 | 74 | 2.62e-11 | 61.6 |
| MS.gene97721.t1 | AT3G14200 | 36.842 | 95 | 47 | 2 | 6 | 87 | 14 | 108 | 2.87e-11 | 62.8 |
| MS.gene97721.t1 | AT3G08970 | 44.928 | 69 | 36 | 1 | 3 | 71 | 26 | 92 | 3.37e-11 | 64.7 |
| MS.gene97721.t1 | AT3G08970 | 44.928 | 69 | 36 | 1 | 3 | 71 | 26 | 92 | 3.37e-11 | 64.7 |
| MS.gene97721.t1 | AT4G13830 | 41.791 | 67 | 38 | 1 | 3 | 68 | 65 | 131 | 3.45e-11 | 62.0 |
| MS.gene97721.t1 | AT1G21080 | 41.333 | 75 | 43 | 1 | 4 | 78 | 6 | 79 | 4.93e-11 | 63.5 |
| MS.gene97721.t1 | AT1G21080 | 41.333 | 75 | 43 | 1 | 4 | 78 | 6 | 79 | 5.21e-11 | 63.5 |
Find 82 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGTTCATTTCCTTTCTC+TGG | 0.187610 | 5.1:+20230465 | None:intergenic |
| TTTGGATTACTATGAGATTT+TGG | 0.205034 | 5.1:-20232247 | MS.gene97721:CDS |
| TGTGAAGGATTCTTGGAAAT+TGG | 0.227790 | 5.1:+20230212 | None:intergenic |
| TTATTGTCAGGATTCTTATC+AGG | 0.253732 | 5.1:+20232156 | None:intergenic |
| ACCCTTCTGTGAAGGATTCT+TGG | 0.263216 | 5.1:+20230205 | None:intergenic |
| CTATGAACATTTCTTAGTTC+TGG | 0.271872 | 5.1:+20230123 | None:intergenic |
| AAATATGCCATCTGCACTTC+TGG | 0.292239 | 5.1:+20231152 | None:intergenic |
| AATCCAACCAGGCTGGAAAA+AGG | 0.300367 | 5.1:-20230505 | MS.gene97721:CDS |
| ACCTTCTGCCATCATGAGTT+TGG | 0.300403 | 5.1:+20231187 | None:intergenic |
| CCATCATGAGTTTGGAAGTA+TGG | 0.318658 | 5.1:+20231195 | None:intergenic |
| TCGTGGGTGTCCAGGTCTTT+TGG | 0.336631 | 5.1:-20231045 | MS.gene97721:CDS |
| CTTATCAGGGTGCCATTTCA+TGG | 0.338061 | 5.1:+20232170 | None:intergenic |
| CACCTTCCAACTTACTACTT+TGG | 0.365824 | 5.1:-20230312 | MS.gene97721:CDS |
| CTCATTCCCATTCCTCCATA+AGG | 0.366245 | 5.1:+20231105 | None:intergenic |
| CTTCACAGAAGGGTAATCTT+AGG | 0.375432 | 5.1:-20230196 | MS.gene97721:CDS |
| GGGCGGCGGCTGCAGAGGCA+TGG | 0.376556 | 5.1:-20231082 | MS.gene97721:CDS |
| TGGATCAATTCCATTGTCTA+TGG | 0.376750 | 5.1:+20230268 | None:intergenic |
| GCCGGCAACCACTTCTTCAT+AGG | 0.383100 | 5.1:+20230244 | None:intergenic |
| AGCCTTGAGGAACTTTATAA+AGG | 0.387959 | 5.1:-20230928 | MS.gene97721:CDS |
| GTTGTTCATTTCCTTTCTCT+GGG | 0.397871 | 5.1:+20230466 | None:intergenic |
| TTCCAACTTACTACTTTGGA+TGG | 0.408557 | 5.1:-20230308 | MS.gene97721:CDS |
| ATAGAAAACTTGCCATGAAA+TGG | 0.412382 | 5.1:-20232182 | MS.gene97721:CDS |
| GGCGGCGGCTGCAGAGGCAT+GGG | 0.419490 | 5.1:-20231081 | MS.gene97721:CDS |
| TCAAGCCCTTATGGAGGAAT+GGG | 0.422615 | 5.1:-20231111 | MS.gene97721:CDS |
| ATAAAGTTCCTCAAGGCTGC+AGG | 0.424684 | 5.1:+20230933 | None:intergenic |
| TCATTCCCATTCCTCCATAA+GGG | 0.426221 | 5.1:+20231106 | None:intergenic |
| CTCATGATGGCAGAAGGTTT+AGG | 0.431407 | 5.1:-20231182 | MS.gene97721:CDS |
| TCAGCATCATTCTTATTGTC+AGG | 0.435149 | 5.1:+20232144 | None:intergenic |
| ATGGGAGGTGCCTTGCGTCT+TGG | 0.439334 | 5.1:+20230970 | None:intergenic |
| TCCTATGAAGAAGTGGTTGC+CGG | 0.441137 | 5.1:-20230245 | MS.gene97721:CDS |
| AGAGCAATTTATGATCAGTA+TGG | 0.447319 | 5.1:-20231267 | MS.gene97721:CDS |
| GGAATGGGAATGAGGGGCGG+CGG | 0.451910 | 5.1:-20231096 | MS.gene97721:CDS |
| ATGAGGGGCGGCGGCTGCAG+AGG | 0.461247 | 5.1:-20231087 | MS.gene97721:CDS |
| GTTTCAGCATCAACCGTGCT+AGG | 0.461527 | 5.1:+20230152 | None:intergenic |
| AATATGCCATCTGCACTTCT+GGG | 0.462504 | 5.1:+20231153 | None:intergenic |
| TATTGTCAGGATTCTTATCA+GGG | 0.462954 | 5.1:+20232157 | None:intergenic |
| ATATCTGCAGCAATGACGTT+TGG | 0.469933 | 5.1:+20230444 | None:intergenic |
| TACATATACCTCATATGCTT+CGG | 0.471997 | 5.1:+20232101 | None:intergenic |
| CTTATGGAGGAATGGGAATG+AGG | 0.472062 | 5.1:-20231104 | MS.gene97721:CDS |
| AAAGTAGTGGAAGATGGGTT+TGG | 0.472595 | 5.1:-20232265 | None:intergenic |
| TTCAAGCCCTTATGGAGGAA+TGG | 0.472986 | 5.1:-20231112 | MS.gene97721:CDS |
| ACTCATATCCGAAGCATATG+AGG | 0.475266 | 5.1:-20232109 | MS.gene97721:intron |
| AAAATCACTTTCCCAGAGAA+AGG | 0.488986 | 5.1:-20230477 | MS.gene97721:CDS |
| GAGGTCAGTCGTGGGTGTCC+AGG | 0.495164 | 5.1:-20231053 | MS.gene97721:CDS |
| ATTGTTAGTATTTCCTCCAC+AGG | 0.497108 | 5.1:+20230531 | None:intergenic |
| GAAAATATCGCCAAAAGACC+TGG | 0.500624 | 5.1:+20231035 | None:intergenic |
| GTCCATCCAAAGTAGTAAGT+TGG | 0.505940 | 5.1:+20230306 | None:intergenic |
| TTCCAAGAATCCTTCACAGA+AGG | 0.519442 | 5.1:-20230207 | MS.gene97721:CDS |
| GAGAAATTGCATATGCAAGC+GGG | 0.530326 | 5.1:-20230879 | MS.gene97721:intron |
| GGAGGAATGGGAATGAGGGG+CGG | 0.532345 | 5.1:-20231099 | MS.gene97721:CDS |
| TCCAAGAATCCTTCACAGAA+GGG | 0.533320 | 5.1:-20230206 | MS.gene97721:CDS |
| TGGGCATGAGAGGTCAGTCG+TGG | 0.533992 | 5.1:-20231062 | MS.gene97721:CDS |
| TTATGGAGGAATGGGAATGA+GGG | 0.534716 | 5.1:-20231103 | MS.gene97721:CDS |
| AAGAAGTGGTTGCCGGCGAA+AGG | 0.544486 | 5.1:-20230238 | MS.gene97721:CDS |
| GGAAATTGGTATCCTTTCGC+CGG | 0.545834 | 5.1:+20230226 | None:intergenic |
| TGCAGAGGCATGGGCATGAG+AGG | 0.547127 | 5.1:-20231072 | MS.gene97721:CDS |
| CACAATGTATTTACAAGACA+AGG | 0.557753 | 5.1:-20230396 | MS.gene97721:intron |
| CAATTGAAATCCAACCAGGC+TGG | 0.559519 | 5.1:-20230512 | MS.gene97721:CDS |
| AATTCCATTGTCTATGGCAA+TGG | 0.561820 | 5.1:+20230274 | None:intergenic |
| CCATACTTCCAAACTCATGA+TGG | 0.563682 | 5.1:-20231195 | MS.gene97721:CDS |
| TGATCCATCCTATGAAGAAG+TGG | 0.566754 | 5.1:-20230252 | MS.gene97721:CDS |
| CTAAGATTACCCTTCTGTGA+AGG | 0.575988 | 5.1:+20230197 | None:intergenic |
| TGTCTTGTAAATACATTGTG+AGG | 0.577798 | 5.1:+20230399 | None:intergenic |
| GCAACCACTTCTTCATAGGA+TGG | 0.578289 | 5.1:+20230248 | None:intergenic |
| CTGACCATTGCCATAGACAA+TGG | 0.580577 | 5.1:-20230278 | MS.gene97721:CDS |
| GCTGCATTGTCACCTGCTGT+AGG | 0.581153 | 5.1:+20231219 | None:intergenic |
| TCCAAACTCATGATGGCAGA+AGG | 0.585224 | 5.1:-20231188 | MS.gene97721:CDS |
| TTCAATCCCAGAAGTGCAGA+TGG | 0.585321 | 5.1:-20231159 | MS.gene97721:CDS |
| TACCTTTATAAAGTTCCTCA+AGG | 0.588311 | 5.1:+20230926 | None:intergenic |
| CTTACTACTTTGGATGGACG+AGG | 0.593609 | 5.1:-20230302 | MS.gene97721:CDS |
| TTTCAGCATCAACCGTGCTA+GGG | 0.595565 | 5.1:+20230153 | None:intergenic |
| CAGCAAAACTGTACCTGTGG+AGG | 0.596250 | 5.1:-20230544 | MS.gene97721:CDS |
| TAAAGTTCCTCAAGGCTGCA+GGG | 0.601158 | 5.1:+20230934 | None:intergenic |
| ATCCAAAGTAGTAAGTTGGA+AGG | 0.613336 | 5.1:+20230310 | None:intergenic |
| CAACATCACATTCCCTAGCA+CGG | 0.615494 | 5.1:-20230165 | MS.gene97721:CDS |
| TAAATTGCCCTGCAGCCTTG+AGG | 0.619632 | 5.1:-20230941 | MS.gene97721:CDS |
| CTAACAATTGAAATCCAACC+AGG | 0.624854 | 5.1:-20230516 | MS.gene97721:CDS |
| GGGCATGAGAGGTCAGTCGT+GGG | 0.626238 | 5.1:-20231061 | MS.gene97721:CDS |
| AGAGAAATTGCATATGCAAG+CGG | 0.626485 | 5.1:-20230880 | MS.gene97721:CDS |
| GAGTCAAGCTCCAAGACGCA+AGG | 0.642529 | 5.1:-20230980 | MS.gene97721:CDS |
| TTGCAGCAAAACTGTACCTG+TGG | 0.665223 | 5.1:-20230547 | MS.gene97721:intron |
| TATGGAGGAATGGGAATGAG+GGG | 0.684119 | 5.1:-20231102 | MS.gene97721:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGGAAAAAATTGAAAATTG+AGG | + | chr5.1:20230603-20230622 | None:intergenic | 20.0% |
| !! | ATAAAATGTAGTTACAAAGT+TGG | + | chr5.1:20231709-20231728 | None:intergenic | 20.0% |
| !!! | AAATTGAAAATTGAGGATTT+TGG | + | chr5.1:20230596-20230615 | None:intergenic | 20.0% |
| !!! | ATTGAAATTTTACTGAATGA+TGG | + | chr5.1:20230959-20230978 | None:intergenic | 20.0% |
| !!! | TTTTTATTTTGGTAAAACCA+AGG | + | chr5.1:20230852-20230871 | None:intergenic | 20.0% |
| ! | AAAATTATTTGACCCTTCTT+AGG | + | chr5.1:20230549-20230568 | None:intergenic | 25.0% |
| ! | AAATTATTTGACCCTTCTTA+GGG | + | chr5.1:20230548-20230567 | None:intergenic | 25.0% |
| ! | AGTTTCAATACATTTCTAAC+TGG | - | chr5.1:20231643-20231662 | MS.gene97721:intron | 25.0% |
| ! | CTTGTTGAGTAATGTTATAA+GGG | - | chr5.1:20230907-20230926 | MS.gene97721:CDS | 25.0% |
| ! | GGAAAAACATATCTTATGAT+AGG | - | chr5.1:20230762-20230781 | MS.gene97721:intron | 25.0% |
| ! | GTTTAATTGCTACAAAACTA+TGG | - | chr5.1:20230332-20230351 | MS.gene97721:CDS | 25.0% |
| !! | ACTTGTTGAGTAATGTTATA+AGG | - | chr5.1:20230906-20230925 | MS.gene97721:CDS | 25.0% |
| !! | ATATGTTTTTCCATATACCA+CGG | + | chr5.1:20230754-20230773 | None:intergenic | 25.0% |
| !! | TCTGACTTAGTATATTGATT+TGG | - | chr5.1:20231067-20231086 | MS.gene97721:CDS | 25.0% |
| !! | TTTGGATTACTATGAGATTT+TGG | - | chr5.1:20230141-20230160 | MS.gene97721:CDS | 25.0% |
| !!! | AAAATTGAGGATTTTGGTAA+GGG | + | chr5.1:20230590-20230609 | None:intergenic | 25.0% |
| !!! | ATTATCTTGTTTCTCTGTTT+TGG | - | chr5.1:20230402-20230421 | MS.gene97721:CDS | 25.0% |
| !!! | GCACACAATTCTTTTTATTT+TGG | + | chr5.1:20230863-20230882 | None:intergenic | 25.0% |
| AATTATTTGACCCTTCTTAG+GGG | + | chr5.1:20230547-20230566 | None:intergenic | 30.0% | |
| ACATTCAGATTGGATAATGA+AGG | + | chr5.1:20230622-20230641 | None:intergenic | 30.0% | |
| AGAGCAATTTATGATCAGTA+TGG | - | chr5.1:20231121-20231140 | MS.gene97721:CDS | 30.0% | |
| ATAGAAAACTTGCCATGAAA+TGG | - | chr5.1:20230206-20230225 | MS.gene97721:CDS | 30.0% | |
| ATTGATCCTAGTTACTTCAA+AGG | - | chr5.1:20230797-20230816 | MS.gene97721:intron | 30.0% | |
| CACAATGTATTTACAAGACA+AGG | - | chr5.1:20231992-20232011 | MS.gene97721:intron | 30.0% | |
| GATGGAAAATAAGTACAACA+AGG | + | chr5.1:20230941-20230960 | None:intergenic | 30.0% | |
| GTAACTAGGATCAATTTAAG+AGG | + | chr5.1:20230792-20230811 | None:intergenic | 30.0% | |
| TACAAGACAAGGTAATGATT+TGG | - | chr5.1:20232003-20232022 | MS.gene97721:intron | 30.0% | |
| TACAATCAGTGATATACAGT+CGG | - | chr5.1:20230506-20230525 | MS.gene97721:CDS | 30.0% | |
| TACATATACCTCATATGCTT+CGG | + | chr5.1:20230290-20230309 | None:intergenic | 30.0% | |
| TACCTTTATAAAGTTCCTCA+AGG | + | chr5.1:20231465-20231484 | None:intergenic | 30.0% | |
| TATTGTCAGGATTCTTATCA+GGG | + | chr5.1:20230234-20230253 | None:intergenic | 30.0% | |
| TGATGTGAATTAAAAAGCCA+GGG | + | chr5.1:20231547-20231566 | None:intergenic | 30.0% | |
| TGTCTTGTAAATACATTGTG+AGG | + | chr5.1:20231992-20232011 | None:intergenic | 30.0% | |
| TTATTGTCAGGATTCTTATC+AGG | + | chr5.1:20230235-20230254 | None:intergenic | 30.0% | |
| TTCAATACATTTCTAACTGG+CGG | - | chr5.1:20231646-20231665 | MS.gene97721:intron | 30.0% | |
| TTCATTATCCAATCTGAATG+TGG | - | chr5.1:20230621-20230640 | MS.gene97721:intron | 30.0% | |
| TTGATGTGAATTAAAAAGCC+AGG | + | chr5.1:20231548-20231567 | None:intergenic | 30.0% | |
| ! | ATTTTCGGCAAAGATGTATT+TGG | - | chr5.1:20231370-20231389 | MS.gene97721:intron | 30.0% |
| ! | TCATAAATTGCTCTCTTTTG+CGG | + | chr5.1:20231115-20231134 | None:intergenic | 30.0% |
| ! | TCTTGAGATCTTCATCTTTT+TGG | + | chr5.1:20231491-20231510 | None:intergenic | 30.0% |
| ! | TTTGACTTTCATCCTAAGTA+AGG | - | chr5.1:20230687-20230706 | MS.gene97721:intron | 30.0% |
| !! | AGTATATTGATTTGGCTTCA+TGG | - | chr5.1:20231075-20231094 | MS.gene97721:CDS | 30.0% |
| !! | CAGGGCAATTTATTTTCAAT+GGG | + | chr5.1:20231439-20231458 | None:intergenic | 30.0% |
| !! | CTGTAGGCATTTCATTTTTA+AGG | + | chr5.1:20231156-20231175 | None:intergenic | 30.0% |
| !! | GAAAATCCTTTGAAGTAACT+AGG | + | chr5.1:20230806-20230825 | None:intergenic | 30.0% |
| !! | GAAAATTGAGGATTTTGGTA+AGG | + | chr5.1:20230591-20230610 | None:intergenic | 30.0% |
| !! | TGTTTACTGTCTTTTGTTTG+AGG | - | chr5.1:20230448-20230467 | MS.gene97721:CDS | 30.0% |
| AAAAATGAAATGCCTACAGC+AGG | - | chr5.1:20231157-20231176 | MS.gene97721:CDS | 35.0% | |
| AAAATCACTTTCCCAGAGAA+AGG | - | chr5.1:20231911-20231930 | MS.gene97721:intron | 35.0% | |
| AATTCCATTGTCTATGGCAA+TGG | + | chr5.1:20232117-20232136 | None:intergenic | 35.0% | |
| ACTGATTGTAGCCATCAAAT+TGG | + | chr5.1:20230496-20230515 | None:intergenic | 35.0% | |
| ACTTGTAGACACACATGAAA+GGG | + | chr5.1:20231787-20231806 | None:intergenic | 35.0% | |
| AGAGAAATTGCATATGCAAG+CGG | - | chr5.1:20231508-20231527 | MS.gene97721:intron | 35.0% | |
| AGCCTTGAGGAACTTTATAA+AGG | - | chr5.1:20231460-20231479 | MS.gene97721:intron | 35.0% | |
| ATTGTTAGTATTTCCTCCAC+AGG | + | chr5.1:20231860-20231879 | None:intergenic | 35.0% | |
| CACAAGATATTACTTGCAGA+AGG | - | chr5.1:20232032-20232051 | MS.gene97721:intron | 35.0% | |
| CAGATTCTGTGAACATTTCA+TGG | + | chr5.1:20231051-20231070 | None:intergenic | 35.0% | |
| CTAACAATTGAAATCCAACC+AGG | - | chr5.1:20231872-20231891 | MS.gene97721:intron | 35.0% | |
| GATGTGAATTAAAAAGCCAG+GGG | + | chr5.1:20231546-20231565 | None:intergenic | 35.0% | |
| GTTGTTCATTTCCTTTCTCT+GGG | + | chr5.1:20231925-20231944 | None:intergenic | 35.0% | |
| TACTTGTAGACACACATGAA+AGG | + | chr5.1:20231788-20231807 | None:intergenic | 35.0% | |
| TCAGCATCATTCTTATTGTC+AGG | + | chr5.1:20230247-20230266 | None:intergenic | 35.0% | |
| TGGATCAATTCCATTGTCTA+TGG | + | chr5.1:20232123-20232142 | None:intergenic | 35.0% | |
| TGTGAAGGATTCTTGGAAAT+TGG | + | chr5.1:20232179-20232198 | None:intergenic | 35.0% | |
| TTCCAACTTACTACTTTGGA+TGG | - | chr5.1:20232080-20232099 | MS.gene97721:intron | 35.0% | |
| ! | ACTGATCATTCATGTTTCTG+AGG | - | chr5.1:20230358-20230377 | MS.gene97721:intron | 35.0% |
| ! | AGGTCTTTTGGCGATATTTT+CGG | - | chr5.1:20231355-20231374 | MS.gene97721:intron | 35.0% |
| ! | ATCCAAAGTAGTAAGTTGGA+AGG | + | chr5.1:20232081-20232100 | None:intergenic | 35.0% |
| ! | GGATTACTATGAGATTTTGG+AGG | - | chr5.1:20230144-20230163 | MS.gene97721:CDS | 35.0% |
| ! | GGCATATTTGCAGAAGTTTT+TGG | - | chr5.1:20231250-20231269 | MS.gene97721:CDS | 35.0% |
| ! | GTGTTTGAGATCCAATTTGA+TGG | - | chr5.1:20230482-20230501 | MS.gene97721:CDS | 35.0% |
| !! | ATATTGATTTGGCTTCATGG+AGG | - | chr5.1:20231078-20231097 | MS.gene97721:CDS | 35.0% |
| !! | GCAGGGCAATTTATTTTCAA+TGG | + | chr5.1:20231440-20231459 | None:intergenic | 35.0% |
| !! | GGCAATTTATTTTCAATGGG+AGG | + | chr5.1:20231436-20231455 | None:intergenic | 35.0% |
| !!! | GCAGAATGAGAGTTTTTTGT+TGG | - | chr5.1:20231604-20231623 | MS.gene97721:intron | 35.0% |
| AAATAGCGCCACATTCAGAT+TGG | + | chr5.1:20230632-20230651 | None:intergenic | 40.0% | |
| AAATATGCCATCTGCACTTC+TGG | + | chr5.1:20231239-20231258 | None:intergenic | 40.0% | |
| AACTCTGTCTATCCATGTTG+TGG | - | chr5.1:20231007-20231026 | MS.gene97721:CDS | 40.0% | |
| AATATGCCATCTGCACTTCT+GGG | + | chr5.1:20231238-20231257 | None:intergenic | 40.0% | |
| ACAACATGGATAGACAGAGT+TGG | + | chr5.1:20231008-20231027 | None:intergenic | 40.0% | |
| ACTCATATCCGAAGCATATG+AGG | - | chr5.1:20230279-20230298 | MS.gene97721:CDS | 40.0% | |
| ACTCTGTCTATCCATGTTGT+GGG | - | chr5.1:20231008-20231027 | MS.gene97721:CDS | 40.0% | |
| ATACAGTCGGATGAAAACTG+AGG | - | chr5.1:20230519-20230538 | MS.gene97721:CDS | 40.0% | |
| ATATCTGCAGCAATGACGTT+TGG | + | chr5.1:20231947-20231966 | None:intergenic | 40.0% | |
| ATGTAAGCATCATTGGTCCA+GGG | - | chr5.1:20230716-20230735 | MS.gene97721:intron | 40.0% | |
| CACCTTCCAACTTACTACTT+TGG | - | chr5.1:20232076-20232095 | MS.gene97721:intron | 40.0% | |
| CCATACTTCCAAACTCATGA+TGG | - | chr5.1:20231193-20231212 | MS.gene97721:CDS | 40.0% | |
| CCATCATGAGTTTGGAAGTA+TGG | + | chr5.1:20231196-20231215 | None:intergenic | 40.0% | |
| CTAAGATTACCCTTCTGTGA+AGG | + | chr5.1:20232194-20232213 | None:intergenic | 40.0% | |
| CTTCACAGAAGGGTAATCTT+AGG | - | chr5.1:20232192-20232211 | MS.gene97721:CDS | 40.0% | |
| GAAAATATCGCCAAAAGACC+TGG | + | chr5.1:20231356-20231375 | None:intergenic | 40.0% | |
| GAGAAATTGCATATGCAAGC+GGG | - | chr5.1:20231509-20231528 | MS.gene97721:intron | 40.0% | |
| GGTTGTTCATTTCCTTTCTC+TGG | + | chr5.1:20231926-20231945 | None:intergenic | 40.0% | |
| GTCCATCCAAAGTAGTAAGT+TGG | + | chr5.1:20232085-20232104 | None:intergenic | 40.0% | |
| TAGACACACATGAAAGGGAA+CGG | + | chr5.1:20231782-20231801 | None:intergenic | 40.0% | |
| TCATTCCCATTCCTCCATAA+GGG | + | chr5.1:20231285-20231304 | None:intergenic | 40.0% | |
| TCCAAGAATCCTTCACAGAA+GGG | - | chr5.1:20232182-20232201 | MS.gene97721:CDS | 40.0% | |
| TGATCCATCCTATGAAGAAG+TGG | - | chr5.1:20232136-20232155 | MS.gene97721:CDS | 40.0% | |
| TTACATGGCACTCCTTACTT+AGG | + | chr5.1:20230702-20230721 | None:intergenic | 40.0% | |
| TTATGGAGGAATGGGAATGA+GGG | - | chr5.1:20231285-20231304 | MS.gene97721:CDS | 40.0% | |
| TTCCAAGAATCCTTCACAGA+AGG | - | chr5.1:20232181-20232200 | MS.gene97721:CDS | 40.0% | |
| ! | TTTTGCTGCAAACACACATG+CGG | + | chr5.1:20231832-20231851 | None:intergenic | 40.0% |
| !!! | TTTGGCTTTTCAAGCCCTTA+TGG | - | chr5.1:20231268-20231287 | MS.gene97721:CDS | 40.0% |
| AAACTGAGGATCCCCTAAGA+AGG | - | chr5.1:20230533-20230552 | MS.gene97721:CDS | 45.0% | |
| AACTGAGGATCCCCTAAGAA+GGG | - | chr5.1:20230534-20230553 | MS.gene97721:CDS | 45.0% | |
| AATCCAACCAGGCTGGAAAA+AGG | - | chr5.1:20231883-20231902 | MS.gene97721:intron | 45.0% | |
| ACCCTTCTGTGAAGGATTCT+TGG | + | chr5.1:20232186-20232205 | None:intergenic | 45.0% | |
| ACCTTCTGCCATCATGAGTT+TGG | + | chr5.1:20231204-20231223 | None:intergenic | 45.0% | |
| AGACACACATGAAAGGGAAC+GGG | + | chr5.1:20231781-20231800 | None:intergenic | 45.0% | |
| ATAAAGTTCCTCAAGGCTGC+AGG | + | chr5.1:20231458-20231477 | None:intergenic | 45.0% | |
| ATCCAACCAGGCTGGAAAAA+GGG | - | chr5.1:20231884-20231903 | MS.gene97721:intron | 45.0% | |
| CAACATCACATTCCCTAGCA+CGG | - | chr5.1:20232223-20232242 | MS.gene97721:CDS | 45.0% | |
| CAATTGAAATCCAACCAGGC+TGG | - | chr5.1:20231876-20231895 | MS.gene97721:intron | 45.0% | |
| CATGTAAGCATCATTGGTCC+AGG | - | chr5.1:20230715-20230734 | MS.gene97721:intron | 45.0% | |
| CTATCCATGTTGTGGGGAAT+GGG | - | chr5.1:20231015-20231034 | MS.gene97721:CDS | 45.0% | |
| CTCATGATGGCAGAAGGTTT+AGG | - | chr5.1:20231206-20231225 | MS.gene97721:CDS | 45.0% | |
| CTCATTCCCATTCCTCCATA+AGG | + | chr5.1:20231286-20231305 | None:intergenic | 45.0% | |
| CTCTGTCTATCCATGTTGTG+GGG | - | chr5.1:20231009-20231028 | MS.gene97721:CDS | 45.0% | |
| CTGACCATTGCCATAGACAA+TGG | - | chr5.1:20232110-20232129 | MS.gene97721:CDS | 45.0% | |
| CTGGACCAATGATGCTTACA+TGG | + | chr5.1:20230717-20230736 | None:intergenic | 45.0% | |
| CTTACTACTTTGGATGGACG+AGG | - | chr5.1:20232086-20232105 | MS.gene97721:intron | 45.0% | |
| CTTATGGAGGAATGGGAATG+AGG | - | chr5.1:20231284-20231303 | MS.gene97721:CDS | 45.0% | |
| GAGTGCCATGTAAGCATCAT+TGG | - | chr5.1:20230709-20230728 | MS.gene97721:intron | 45.0% | |
| GCAACCACTTCTTCATAGGA+TGG | + | chr5.1:20232143-20232162 | None:intergenic | 45.0% | |
| GGAAATTGGTATCCTTTCGC+CGG | + | chr5.1:20232165-20232184 | None:intergenic | 45.0% | |
| GTTGCACGTAGATGATACCT+TGG | - | chr5.1:20230832-20230851 | MS.gene97721:intron | 45.0% | |
| TAAAGTTCCTCAAGGCTGCA+GGG | + | chr5.1:20231457-20231476 | None:intergenic | 45.0% | |
| TATCCATGTTGTGGGGAATG+GGG | - | chr5.1:20231016-20231035 | MS.gene97721:CDS | 45.0% | |
| TATGGAGGAATGGGAATGAG+GGG | - | chr5.1:20231286-20231305 | MS.gene97721:CDS | 45.0% | |
| TCAAGCCCTTATGGAGGAAT+GGG | - | chr5.1:20231277-20231296 | MS.gene97721:CDS | 45.0% | |
| TCCAAACTCATGATGGCAGA+AGG | - | chr5.1:20231200-20231219 | MS.gene97721:CDS | 45.0% | |
| TCCTATGAAGAAGTGGTTGC+CGG | - | chr5.1:20232143-20232162 | MS.gene97721:CDS | 45.0% | |
| TCTATCCATGTTGTGGGGAA+TGG | - | chr5.1:20231014-20231033 | MS.gene97721:CDS | 45.0% | |
| TTCAAGCCCTTATGGAGGAA+TGG | - | chr5.1:20231276-20231295 | MS.gene97721:CDS | 45.0% | |
| TTGCAGCAAAACTGTACCTG+TGG | - | chr5.1:20231841-20231860 | MS.gene97721:intron | 45.0% | |
| TTTCAGCATCAACCGTGCTA+GGG | + | chr5.1:20232238-20232257 | None:intergenic | 45.0% | |
| TTTGCTGCAAACACACATGC+GGG | + | chr5.1:20231831-20231850 | None:intergenic | 45.0% | |
| ! | GTTTTTCCATATACCACGGC+CGG | + | chr5.1:20230750-20230769 | None:intergenic | 45.0% |
| ! | TTCAATCCCAGAAGTGCAGA+TGG | - | chr5.1:20231229-20231248 | MS.gene97721:CDS | 45.0% |
| !! | CTTATCAGGGTGCCATTTCA+TGG | + | chr5.1:20230221-20230240 | None:intergenic | 45.0% |
| CAGCAAAACTGTACCTGTGG+AGG | - | chr5.1:20231844-20231863 | MS.gene97721:intron | 50.0% | |
| GTTTCAGCATCAACCGTGCT+AGG | + | chr5.1:20232239-20232258 | None:intergenic | 50.0% | |
| TAAATTGCCCTGCAGCCTTG+AGG | - | chr5.1:20231447-20231466 | MS.gene97721:intron | 50.0% | |
| TTGGTCCAGGGTTTGATCTC+CGG | - | chr5.1:20230728-20230747 | MS.gene97721:intron | 50.0% | |
| ! | TTCCCTTTTTCCAGCCTGGT+TGG | + | chr5.1:20231889-20231908 | None:intergenic | 50.0% |
| ! | TTCGTTCCCTTTTTCCAGCC+TGG | + | chr5.1:20231893-20231912 | None:intergenic | 50.0% |
| !! | GGCTTTTCAAGCCCTTATGG+AGG | - | chr5.1:20231271-20231290 | MS.gene97721:CDS | 50.0% |
| AAGAAGTGGTTGCCGGCGAA+AGG | - | chr5.1:20232150-20232169 | MS.gene97721:CDS | 55.0% | |
| CATCCCCATTCCCCACAACA+TGG | + | chr5.1:20231022-20231041 | None:intergenic | 55.0% | |
| GAGTCAAGCTCCAAGACGCA+AGG | - | chr5.1:20231408-20231427 | MS.gene97721:intron | 55.0% | |
| GCCGGCAACCACTTCTTCAT+AGG | + | chr5.1:20232147-20232166 | None:intergenic | 55.0% | |
| GCTGCATTGTCACCTGCTGT+AGG | + | chr5.1:20231172-20231191 | None:intergenic | 55.0% | |
| TGATCTCCGGCCGTGGTATA+TGG | - | chr5.1:20230741-20230760 | MS.gene97721:intron | 55.0% | |
| ! | TCGTGGGTGTCCAGGTCTTT+TGG | - | chr5.1:20231343-20231362 | MS.gene97721:intron | 55.0% |
| GCGGGTAAATGCTCTTCCCC+TGG | - | chr5.1:20231527-20231546 | MS.gene97721:intron | 60.0% | |
| GGAGGAATGGGAATGAGGGG+CGG | - | chr5.1:20231289-20231308 | MS.gene97721:CDS | 60.0% | |
| GGGCATGAGAGGTCAGTCGT+GGG | - | chr5.1:20231327-20231346 | MS.gene97721:intron | 60.0% | |
| TGGGCATGAGAGGTCAGTCG+TGG | - | chr5.1:20231326-20231345 | MS.gene97721:intron | 60.0% | |
| ! | TGCAGAGGCATGGGCATGAG+AGG | - | chr5.1:20231316-20231335 | MS.gene97721:intron | 60.0% |
| !! | ATGGGAGGTGCCTTGCGTCT+TGG | + | chr5.1:20231421-20231440 | None:intergenic | 60.0% |
| CACGGCCGGAGATCAAACCC+TGG | + | chr5.1:20230736-20230755 | None:intergenic | 65.0% | |
| CAGGGTTTGATCTCCGGCCG+TGG | - | chr5.1:20230734-20230753 | MS.gene97721:intron | 65.0% | |
| GAGGTCAGTCGTGGGTGTCC+AGG | - | chr5.1:20231335-20231354 | MS.gene97721:intron | 65.0% | |
| GGAATGGGAATGAGGGGCGG+CGG | - | chr5.1:20231292-20231311 | MS.gene97721:intron | 65.0% | |
| ATGAGGGGCGGCGGCTGCAG+AGG | - | chr5.1:20231301-20231320 | MS.gene97721:intron | 75.0% | |
| ! | GGCGGCGGCTGCAGAGGCAT+GGG | - | chr5.1:20231307-20231326 | MS.gene97721:intron | 75.0% |
| ! | GGGCGGCGGCTGCAGAGGCA+TGG | - | chr5.1:20231306-20231325 | MS.gene97721:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 20230136 | 20232274 | 20230136 | ID=MS.gene97721 |
| chr5.1 | mRNA | 20230136 | 20232274 | 20230136 | ID=MS.gene97721.t1;Parent=MS.gene97721 |
| chr5.1 | exon | 20232110 | 20232274 | 20232110 | ID=MS.gene97721.t1.exon1;Parent=MS.gene97721.t1 |
| chr5.1 | CDS | 20232110 | 20232274 | 20232110 | ID=cds.MS.gene97721.t1;Parent=MS.gene97721.t1 |
| chr5.1 | exon | 20230880 | 20231310 | 20230880 | ID=MS.gene97721.t1.exon2;Parent=MS.gene97721.t1 |
| chr5.1 | CDS | 20230880 | 20231310 | 20230880 | ID=cds.MS.gene97721.t1;Parent=MS.gene97721.t1 |
| chr5.1 | exon | 20230397 | 20230563 | 20230397 | ID=MS.gene97721.t1.exon3;Parent=MS.gene97721.t1 |
| chr5.1 | CDS | 20230397 | 20230563 | 20230397 | ID=cds.MS.gene97721.t1;Parent=MS.gene97721.t1 |
| chr5.1 | exon | 20230136 | 20230359 | 20230136 | ID=MS.gene97721.t1.exon4;Parent=MS.gene97721.t1 |
| chr5.1 | CDS | 20230136 | 20230359 | 20230136 | ID=cds.MS.gene97721.t1;Parent=MS.gene97721.t1 |
| Gene Sequence |
| Protein sequence |
