Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99030.t1 | XP_003613558.1 | 97.5 | 281 | 7 | 0 | 1 | 281 | 60 | 340 | 5.60E-154 | 553.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99030.t1 | Q8RX77 | 61.9 | 281 | 104 | 2 | 1 | 281 | 80 | 357 | 3.5e-96 | 352.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99030.t1 | G7K9P5 | 97.5 | 281 | 7 | 0 | 1 | 281 | 60 | 340 | 4.0e-154 | 553.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene99030 | 0.822005 | 2.98E-53 | -1.69E-46 |
| MS.gene049378 | MS.gene99030 | 0.819561 | 1.09E-52 | -1.69E-46 |
| MS.gene050105 | MS.gene99030 | 0.828982 | 6.64E-55 | -1.69E-46 |
| MS.gene050226 | MS.gene99030 | 0.810308 | 1.23E-50 | -1.69E-46 |
| MS.gene050228 | MS.gene99030 | 0.800746 | 1.25E-48 | -1.69E-46 |
| MS.gene050508 | MS.gene99030 | 0.827638 | 1.40E-54 | -1.69E-46 |
| MS.gene050605 | MS.gene99030 | 0.800957 | 1.13E-48 | -1.69E-46 |
| MS.gene051368 | MS.gene99030 | 0.848623 | 5.45E-60 | -1.69E-46 |
| MS.gene051983 | MS.gene99030 | 0.80179 | 7.63E-49 | -1.69E-46 |
| MS.gene05216 | MS.gene99030 | 0.81295 | 3.28E-51 | -1.69E-46 |
| MS.gene052333 | MS.gene99030 | 0.835125 | 2.01E-56 | -1.69E-46 |
| MS.gene052389 | MS.gene99030 | 0.816605 | 5.07E-52 | -1.69E-46 |
| MS.gene052586 | MS.gene99030 | 0.808664 | 2.77E-50 | -1.69E-46 |
| MS.gene052677 | MS.gene99030 | 0.806956 | 6.39E-50 | -1.69E-46 |
| MS.gene055367 | MS.gene99030 | 0.83316 | 6.26E-56 | -1.69E-46 |
| MS.gene055701 | MS.gene99030 | 0.857555 | 1.51E-62 | -1.69E-46 |
| MS.gene05595 | MS.gene99030 | 0.830161 | 3.43E-55 | -1.69E-46 |
| MS.gene057156 | MS.gene99030 | -0.842419 | 2.62E-58 | -1.69E-46 |
| MS.gene058223 | MS.gene99030 | -0.833049 | 6.67E-56 | -1.69E-46 |
| MS.gene058435 | MS.gene99030 | 0.813575 | 2.39E-51 | -1.69E-46 |
| MS.gene060011 | MS.gene99030 | 0.809759 | 1.61E-50 | -1.69E-46 |
| MS.gene060850 | MS.gene99030 | 0.804304 | 2.30E-49 | -1.69E-46 |
| MS.gene060851 | MS.gene99030 | 0.822589 | 2.18E-53 | -1.69E-46 |
| MS.gene060852 | MS.gene99030 | 0.821171 | 4.65E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99030.t1 | MTR_5g038060 | 97.509 | 281 | 7 | 0 | 1 | 281 | 60 | 340 | 0.0 | 563 |
| MS.gene99030.t1 | MTR_8g469480 | 70.463 | 281 | 83 | 0 | 1 | 281 | 67 | 347 | 9.12e-148 | 427 |
| MS.gene99030.t1 | MTR_5g038190 | 51.601 | 281 | 134 | 1 | 1 | 281 | 53 | 331 | 1.47e-99 | 303 |
| MS.gene99030.t1 | MTR_8g469470 | 52.128 | 282 | 133 | 2 | 1 | 281 | 61 | 341 | 6.58e-98 | 299 |
| MS.gene99030.t1 | MTR_4g107510 | 50.883 | 283 | 131 | 4 | 1 | 281 | 65 | 341 | 2.45e-92 | 285 |
| MS.gene99030.t1 | MTR_4g107580 | 48.239 | 284 | 138 | 5 | 1 | 281 | 53 | 330 | 2.20e-87 | 272 |
| MS.gene99030.t1 | MTR_4g107530 | 47.872 | 282 | 141 | 3 | 1 | 281 | 62 | 338 | 7.17e-84 | 263 |
| MS.gene99030.t1 | MTR_4g107610 | 45.552 | 281 | 146 | 3 | 2 | 281 | 61 | 335 | 2.60e-81 | 256 |
| MS.gene99030.t1 | MTR_7g064780 | 40.559 | 286 | 159 | 4 | 1 | 281 | 55 | 334 | 9.16e-72 | 231 |
| MS.gene99030.t1 | MTR_7g064800 | 39.583 | 288 | 161 | 5 | 1 | 281 | 55 | 336 | 1.19e-70 | 228 |
| MS.gene99030.t1 | MTR_5g055000 | 41.489 | 282 | 151 | 5 | 3 | 281 | 49 | 319 | 1.42e-66 | 218 |
| MS.gene99030.t1 | MTR_1g026740 | 38.811 | 286 | 154 | 6 | 1 | 280 | 46 | 316 | 1.08e-65 | 215 |
| MS.gene99030.t1 | MTR_7g088825 | 39.932 | 293 | 147 | 5 | 1 | 281 | 51 | 326 | 2.85e-65 | 214 |
| MS.gene99030.t1 | MTR_2g101650 | 37.979 | 287 | 160 | 7 | 1 | 281 | 53 | 327 | 2.26e-64 | 212 |
| MS.gene99030.t1 | MTR_7g088820 | 41.053 | 285 | 151 | 5 | 3 | 281 | 56 | 329 | 1.22e-63 | 210 |
| MS.gene99030.t1 | MTR_1g009200 | 40.070 | 287 | 154 | 6 | 1 | 281 | 56 | 330 | 2.22e-63 | 209 |
| MS.gene99030.t1 | MTR_7g088790 | 40.000 | 280 | 161 | 3 | 3 | 281 | 60 | 333 | 5.74e-61 | 203 |
| MS.gene99030.t1 | MTR_7g088820 | 41.091 | 275 | 145 | 5 | 13 | 281 | 4 | 267 | 6.73e-61 | 201 |
| MS.gene99030.t1 | MTR_1g026770 | 38.434 | 281 | 161 | 5 | 1 | 280 | 44 | 313 | 9.78e-59 | 196 |
| MS.gene99030.t1 | MTR_8g103233 | 38.380 | 284 | 161 | 6 | 1 | 281 | 46 | 318 | 2.05e-58 | 196 |
| MS.gene99030.t1 | MTR_1g026750 | 37.762 | 286 | 157 | 7 | 1 | 280 | 47 | 317 | 4.61e-58 | 195 |
| MS.gene99030.t1 | MTR_2g101590 | 36.268 | 284 | 168 | 6 | 1 | 281 | 55 | 328 | 5.45e-57 | 193 |
| MS.gene99030.t1 | MTR_7g067010 | 37.276 | 279 | 165 | 5 | 3 | 281 | 55 | 323 | 1.42e-54 | 186 |
| MS.gene99030.t1 | MTR_2g101640 | 35.563 | 284 | 172 | 6 | 1 | 281 | 52 | 327 | 4.98e-54 | 185 |
| MS.gene99030.t1 | MTR_4g011280 | 35.540 | 287 | 166 | 7 | 1 | 281 | 61 | 334 | 5.23e-54 | 184 |
| MS.gene99030.t1 | MTR_4g015080 | 37.722 | 281 | 161 | 6 | 3 | 281 | 65 | 333 | 7.70e-54 | 184 |
| MS.gene99030.t1 | MTR_2g101610 | 35.211 | 284 | 171 | 6 | 1 | 281 | 56 | 329 | 9.15e-54 | 184 |
| MS.gene99030.t1 | MTR_7g098220 | 37.370 | 289 | 155 | 5 | 1 | 281 | 15 | 285 | 8.55e-53 | 181 |
| MS.gene99030.t1 | MTR_7g098220 | 37.370 | 289 | 155 | 5 | 1 | 281 | 59 | 329 | 1.48e-52 | 181 |
| MS.gene99030.t1 | MTR_3g462710 | 37.102 | 283 | 165 | 5 | 1 | 281 | 53 | 324 | 1.77e-52 | 180 |
| MS.gene99030.t1 | MTR_7g098180 | 35.336 | 283 | 170 | 3 | 1 | 281 | 60 | 331 | 3.53e-52 | 180 |
| MS.gene99030.t1 | MTR_3g069500 | 34.767 | 279 | 169 | 4 | 3 | 281 | 66 | 331 | 9.63e-52 | 178 |
| MS.gene99030.t1 | MTR_3g069440 | 36.918 | 279 | 163 | 4 | 3 | 281 | 64 | 329 | 1.79e-51 | 177 |
| MS.gene99030.t1 | MTR_3g112470 | 35.336 | 283 | 165 | 5 | 3 | 281 | 54 | 322 | 2.05e-51 | 177 |
| MS.gene99030.t1 | MTR_2g101560 | 34.859 | 284 | 172 | 6 | 1 | 281 | 56 | 329 | 1.72e-50 | 176 |
| MS.gene99030.t1 | MTR_5g012270 | 35.540 | 287 | 169 | 5 | 1 | 281 | 58 | 334 | 2.06e-50 | 174 |
| MS.gene99030.t1 | MTR_3g112460 | 34.982 | 283 | 166 | 5 | 3 | 281 | 54 | 322 | 1.80e-49 | 172 |
| MS.gene99030.t1 | MTR_7g098040 | 35.336 | 283 | 169 | 5 | 1 | 281 | 63 | 333 | 2.36e-48 | 169 |
| MS.gene99030.t1 | MTR_1g041875 | 35.069 | 288 | 162 | 4 | 2 | 281 | 59 | 329 | 5.51e-48 | 168 |
| MS.gene99030.t1 | MTR_1g075440 | 37.050 | 278 | 164 | 4 | 5 | 281 | 61 | 328 | 6.09e-48 | 168 |
| MS.gene99030.t1 | MTR_7g098200 | 32.872 | 289 | 168 | 5 | 1 | 281 | 58 | 328 | 9.39e-48 | 168 |
| MS.gene99030.t1 | MTR_7g098200 | 33.808 | 281 | 166 | 5 | 1 | 281 | 58 | 318 | 1.47e-47 | 167 |
| MS.gene99030.t1 | MTR_7g098230 | 35.211 | 284 | 168 | 6 | 1 | 281 | 55 | 325 | 3.05e-47 | 166 |
| MS.gene99030.t1 | MTR_0236s0050 | 34.507 | 284 | 164 | 7 | 1 | 281 | 2 | 266 | 4.34e-47 | 164 |
| MS.gene99030.t1 | MTR_7g006540 | 36.823 | 277 | 165 | 4 | 9 | 281 | 100 | 370 | 4.47e-47 | 166 |
| MS.gene99030.t1 | MTR_1g041885 | 34.752 | 282 | 171 | 4 | 2 | 281 | 12 | 282 | 6.16e-47 | 164 |
| MS.gene99030.t1 | MTR_7g098150 | 32.384 | 281 | 180 | 2 | 1 | 281 | 62 | 332 | 1.16e-46 | 163 |
| MS.gene99030.t1 | MTR_7g098090 | 34.155 | 284 | 171 | 5 | 1 | 281 | 62 | 332 | 1.69e-46 | 164 |
| MS.gene99030.t1 | MTR_3g112450 | 35.563 | 284 | 165 | 6 | 3 | 281 | 54 | 324 | 1.87e-46 | 164 |
| MS.gene99030.t1 | MTR_7g098160 | 33.564 | 289 | 166 | 5 | 1 | 281 | 62 | 332 | 2.91e-46 | 164 |
| MS.gene99030.t1 | MTR_1g041835 | 39.091 | 220 | 132 | 1 | 1 | 220 | 56 | 273 | 2.93e-46 | 163 |
| MS.gene99030.t1 | MTR_3g069420 | 34.875 | 281 | 170 | 4 | 1 | 281 | 63 | 330 | 5.72e-46 | 163 |
| MS.gene99030.t1 | MTR_1g041815 | 36.187 | 257 | 157 | 3 | 1 | 255 | 56 | 307 | 9.71e-46 | 162 |
| MS.gene99030.t1 | MTR_1g057460 | 33.099 | 284 | 168 | 7 | 1 | 281 | 2 | 266 | 1.35e-45 | 160 |
| MS.gene99030.t1 | MTR_7g088820 | 39.565 | 230 | 122 | 5 | 58 | 281 | 1 | 219 | 1.44e-45 | 160 |
| MS.gene99030.t1 | MTR_1g057460 | 33.099 | 284 | 168 | 7 | 1 | 281 | 73 | 337 | 3.72e-45 | 160 |
| MS.gene99030.t1 | MTR_1g042310 | 35.192 | 287 | 165 | 7 | 1 | 281 | 11 | 282 | 7.19e-45 | 159 |
| MS.gene99030.t1 | MTR_1g042310 | 35.192 | 287 | 165 | 7 | 1 | 281 | 18 | 289 | 9.31e-45 | 159 |
| MS.gene99030.t1 | MTR_1g042310 | 34.752 | 282 | 173 | 5 | 1 | 281 | 55 | 326 | 1.21e-44 | 159 |
| MS.gene99030.t1 | MTR_5g014150 | 32.982 | 285 | 180 | 6 | 1 | 281 | 73 | 350 | 1.61e-43 | 156 |
| MS.gene99030.t1 | MTR_4g019580 | 32.270 | 282 | 178 | 4 | 1 | 281 | 65 | 334 | 3.65e-43 | 155 |
| MS.gene99030.t1 | MTR_5g012290 | 32.753 | 287 | 178 | 5 | 1 | 281 | 56 | 333 | 2.58e-41 | 150 |
| MS.gene99030.t1 | MTR_3g100980 | 33.216 | 283 | 176 | 4 | 1 | 281 | 45 | 316 | 2.69e-41 | 150 |
| MS.gene99030.t1 | MTR_7g065080 | 33.101 | 287 | 169 | 6 | 1 | 281 | 60 | 329 | 6.81e-41 | 149 |
| MS.gene99030.t1 | MTR_4g101380 | 34.028 | 288 | 175 | 5 | 1 | 281 | 56 | 335 | 1.39e-40 | 148 |
| MS.gene99030.t1 | MTR_3g072300 | 35.798 | 257 | 151 | 7 | 3 | 255 | 55 | 301 | 6.02e-40 | 146 |
| MS.gene99030.t1 | MTR_3g014790 | 33.333 | 285 | 162 | 4 | 1 | 281 | 46 | 306 | 7.40e-40 | 145 |
| MS.gene99030.t1 | MTR_7g005930 | 29.893 | 281 | 189 | 3 | 1 | 281 | 64 | 336 | 9.91e-39 | 143 |
| MS.gene99030.t1 | MTR_4g114340 | 34.982 | 283 | 171 | 4 | 1 | 281 | 53 | 324 | 1.09e-38 | 143 |
| MS.gene99030.t1 | MTR_3g462710 | 39.130 | 207 | 118 | 4 | 77 | 281 | 15 | 215 | 1.53e-38 | 140 |
| MS.gene99030.t1 | MTR_4g033315 | 33.099 | 284 | 151 | 8 | 3 | 281 | 62 | 311 | 1.30e-37 | 139 |
| MS.gene99030.t1 | MTR_4g033310 | 33.099 | 284 | 151 | 8 | 3 | 281 | 62 | 311 | 1.30e-37 | 139 |
| MS.gene99030.t1 | MTR_4g033325 | 34.155 | 284 | 146 | 8 | 3 | 281 | 62 | 309 | 1.92e-37 | 139 |
| MS.gene99030.t1 | MTR_4g098800 | 29.682 | 283 | 192 | 4 | 1 | 281 | 65 | 342 | 3.27e-37 | 139 |
| MS.gene99030.t1 | MTR_4g098800 | 29.682 | 283 | 192 | 4 | 1 | 281 | 130 | 407 | 5.58e-37 | 139 |
| MS.gene99030.t1 | MTR_4g033395 | 32.959 | 267 | 149 | 5 | 3 | 264 | 63 | 304 | 5.96e-37 | 137 |
| MS.gene99030.t1 | MTR_7g010820 | 29.787 | 282 | 191 | 3 | 1 | 281 | 55 | 330 | 7.31e-37 | 138 |
| MS.gene99030.t1 | MTR_5g085850 | 31.673 | 281 | 182 | 2 | 1 | 281 | 59 | 329 | 2.90e-36 | 136 |
| MS.gene99030.t1 | MTR_8g087810 | 30.142 | 282 | 190 | 5 | 3 | 280 | 52 | 330 | 3.96e-36 | 135 |
| MS.gene99030.t1 | MTR_2g017750 | 30.742 | 283 | 188 | 5 | 3 | 280 | 65 | 344 | 4.32e-36 | 136 |
| MS.gene99030.t1 | MTR_1g009170 | 40.323 | 186 | 92 | 7 | 103 | 280 | 10 | 184 | 6.07e-36 | 132 |
| MS.gene99030.t1 | MTR_3g100980 | 30.225 | 311 | 176 | 5 | 1 | 281 | 45 | 344 | 1.04e-35 | 135 |
| MS.gene99030.t1 | MTR_4g033375 | 30.986 | 284 | 158 | 6 | 3 | 281 | 63 | 313 | 1.68e-35 | 133 |
| MS.gene99030.t1 | MTR_4g033330 | 34.221 | 263 | 142 | 6 | 3 | 260 | 62 | 298 | 2.66e-35 | 133 |
| MS.gene99030.t1 | MTR_7g065080 | 33.721 | 258 | 148 | 6 | 30 | 281 | 2 | 242 | 1.11e-34 | 130 |
| MS.gene99030.t1 | MTR_8g038880 | 35.315 | 286 | 153 | 6 | 3 | 281 | 51 | 311 | 4.60e-34 | 130 |
| MS.gene99030.t1 | MTR_1g116930 | 30.556 | 288 | 178 | 8 | 1 | 281 | 52 | 324 | 4.62e-34 | 130 |
| MS.gene99030.t1 | MTR_2g093640 | 31.228 | 285 | 182 | 5 | 1 | 281 | 50 | 324 | 4.63e-34 | 130 |
| MS.gene99030.t1 | MTR_0294s0020 | 33.333 | 282 | 151 | 8 | 3 | 281 | 62 | 309 | 3.17e-33 | 127 |
| MS.gene99030.t1 | MTR_7g098200 | 32.328 | 232 | 131 | 5 | 58 | 281 | 1 | 214 | 4.03e-33 | 126 |
| MS.gene99030.t1 | MTR_3g005010 | 30.496 | 282 | 154 | 5 | 3 | 281 | 61 | 303 | 3.52e-32 | 124 |
| MS.gene99030.t1 | MTR_2g005130 | 28.826 | 281 | 180 | 5 | 1 | 281 | 69 | 329 | 4.91e-32 | 124 |
| MS.gene99030.t1 | MTR_8g087780 | 29.167 | 288 | 184 | 7 | 3 | 280 | 52 | 329 | 8.17e-32 | 124 |
| MS.gene99030.t1 | MTR_2g093180 | 29.474 | 285 | 188 | 6 | 1 | 281 | 50 | 325 | 5.30e-31 | 121 |
| MS.gene99030.t1 | MTR_1g085090 | 29.181 | 281 | 182 | 5 | 1 | 281 | 48 | 311 | 6.40e-31 | 121 |
| MS.gene99030.t1 | MTR_2g093160 | 27.660 | 282 | 195 | 4 | 1 | 281 | 50 | 323 | 2.43e-30 | 119 |
| MS.gene99030.t1 | MTR_7g013270 | 30.450 | 289 | 179 | 7 | 1 | 281 | 119 | 393 | 2.37e-29 | 117 |
| MS.gene99030.t1 | MTR_7g111260 | 30.496 | 282 | 177 | 8 | 1 | 281 | 48 | 311 | 2.37e-28 | 114 |
| MS.gene99030.t1 | MTR_4g107670 | 30.144 | 209 | 141 | 2 | 1 | 209 | 53 | 256 | 6.40e-28 | 112 |
| MS.gene99030.t1 | MTR_4g123537 | 30.556 | 252 | 158 | 5 | 31 | 281 | 100 | 335 | 1.00e-27 | 112 |
| MS.gene99030.t1 | MTR_8g469310 | 30.622 | 209 | 141 | 1 | 1 | 209 | 55 | 259 | 3.77e-25 | 105 |
| MS.gene99030.t1 | MTR_5g038380 | 29.187 | 209 | 144 | 1 | 1 | 209 | 57 | 261 | 2.79e-24 | 102 |
| MS.gene99030.t1 | MTR_4g033325 | 32.174 | 230 | 115 | 7 | 57 | 281 | 18 | 211 | 6.60e-24 | 100 |
| MS.gene99030.t1 | MTR_4g033325 | 33.010 | 206 | 109 | 7 | 81 | 281 | 4 | 185 | 1.36e-22 | 96.7 |
| MS.gene99030.t1 | MTR_4g033310 | 37.931 | 145 | 74 | 3 | 3 | 147 | 62 | 190 | 3.15e-22 | 96.3 |
| MS.gene99030.t1 | MTR_4g033385 | 31.304 | 230 | 120 | 6 | 57 | 281 | 16 | 212 | 3.24e-22 | 95.9 |
| MS.gene99030.t1 | MTR_7g051880 | 26.482 | 253 | 165 | 3 | 3 | 255 | 56 | 287 | 1.24e-21 | 94.7 |
| MS.gene99030.t1 | MTR_7g052600 | 27.092 | 251 | 162 | 3 | 3 | 253 | 56 | 285 | 3.53e-20 | 90.5 |
| MS.gene99030.t1 | MTR_7g051830 | 27.099 | 262 | 166 | 4 | 3 | 264 | 56 | 292 | 3.80e-20 | 90.1 |
| MS.gene99030.t1 | MTR_6g008690 | 29.167 | 240 | 137 | 4 | 3 | 224 | 38 | 262 | 5.68e-17 | 80.9 |
| MS.gene99030.t1 | MTR_7g098210 | 25.352 | 284 | 133 | 9 | 1 | 281 | 11 | 218 | 9.59e-16 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99030.t1 | AT1G69870 | 61.922 | 281 | 104 | 2 | 1 | 281 | 80 | 357 | 2.50e-122 | 363 |
| MS.gene99030.t1 | AT1G27080 | 55.160 | 281 | 122 | 3 | 1 | 281 | 1 | 277 | 8.82e-105 | 315 |
| MS.gene99030.t1 | AT1G27080 | 55.160 | 281 | 122 | 3 | 1 | 281 | 43 | 319 | 2.70e-104 | 315 |
| MS.gene99030.t1 | AT1G69860 | 46.953 | 279 | 137 | 4 | 1 | 278 | 47 | 315 | 3.35e-85 | 265 |
| MS.gene99030.t1 | AT1G18880 | 44.406 | 286 | 143 | 5 | 1 | 281 | 48 | 322 | 2.36e-77 | 246 |
| MS.gene99030.t1 | AT5G62680 | 42.908 | 282 | 155 | 3 | 1 | 281 | 72 | 348 | 2.38e-76 | 244 |
| MS.gene99030.t1 | AT5G28470 | 42.705 | 281 | 153 | 3 | 2 | 281 | 47 | 320 | 1.74e-68 | 222 |
| MS.gene99030.t1 | AT5G28470 | 42.705 | 281 | 153 | 3 | 2 | 281 | 47 | 320 | 1.76e-68 | 222 |
| MS.gene99030.t1 | AT1G52190 | 39.437 | 284 | 163 | 5 | 1 | 281 | 50 | 327 | 1.14e-66 | 218 |
| MS.gene99030.t1 | AT3G16180 | 40.767 | 287 | 154 | 6 | 1 | 281 | 52 | 328 | 2.93e-66 | 217 |
| MS.gene99030.t1 | AT3G47960 | 42.553 | 282 | 154 | 4 | 1 | 281 | 90 | 364 | 1.46e-64 | 213 |
| MS.gene99030.t1 | AT1G68570 | 40.141 | 284 | 155 | 4 | 3 | 281 | 24 | 297 | 4.11e-61 | 202 |
| MS.gene99030.t1 | AT1G68570 | 40.141 | 284 | 155 | 4 | 3 | 281 | 54 | 327 | 7.40e-61 | 202 |
| MS.gene99030.t1 | AT2G02040 | 37.809 | 283 | 165 | 4 | 1 | 281 | 70 | 343 | 1.71e-56 | 191 |
| MS.gene99030.t1 | AT3G54140 | 39.085 | 284 | 155 | 6 | 3 | 281 | 55 | 325 | 3.15e-55 | 187 |
| MS.gene99030.t1 | AT3G54140 | 39.085 | 284 | 155 | 6 | 3 | 281 | 55 | 325 | 3.15e-55 | 187 |
| MS.gene99030.t1 | AT1G62200 | 38.869 | 283 | 165 | 4 | 1 | 281 | 81 | 357 | 2.15e-54 | 186 |
| MS.gene99030.t1 | AT5G01180 | 35.587 | 281 | 168 | 5 | 3 | 281 | 56 | 325 | 5.05e-53 | 181 |
| MS.gene99030.t1 | AT5G01180 | 35.587 | 281 | 168 | 5 | 3 | 281 | 56 | 325 | 5.05e-53 | 181 |
| MS.gene99030.t1 | AT5G01180 | 35.587 | 281 | 168 | 5 | 3 | 281 | 56 | 325 | 5.05e-53 | 181 |
| MS.gene99030.t1 | AT1G62200 | 36.893 | 309 | 164 | 4 | 1 | 281 | 81 | 386 | 5.02e-52 | 179 |
| MS.gene99030.t1 | AT1G62200 | 36.893 | 309 | 164 | 4 | 1 | 281 | 95 | 400 | 7.28e-52 | 179 |
| MS.gene99030.t1 | AT3G45660 | 34.859 | 284 | 160 | 5 | 1 | 281 | 50 | 311 | 4.86e-51 | 176 |
| MS.gene99030.t1 | AT3G45660 | 34.859 | 284 | 160 | 5 | 1 | 281 | 50 | 311 | 4.86e-51 | 176 |
| MS.gene99030.t1 | AT3G45660 | 34.859 | 284 | 160 | 5 | 1 | 281 | 71 | 332 | 8.67e-51 | 176 |
| MS.gene99030.t1 | AT3G45650 | 35.915 | 284 | 157 | 5 | 1 | 281 | 51 | 312 | 1.28e-49 | 172 |
| MS.gene99030.t1 | AT3G45650 | 35.915 | 284 | 157 | 5 | 1 | 281 | 51 | 312 | 1.36e-49 | 172 |
| MS.gene99030.t1 | AT5G46040 | 35.336 | 283 | 168 | 5 | 1 | 281 | 56 | 325 | 4.22e-49 | 171 |
| MS.gene99030.t1 | AT2G02020 | 39.111 | 225 | 132 | 1 | 1 | 225 | 71 | 290 | 4.53e-48 | 168 |
| MS.gene99030.t1 | AT2G02020 | 38.819 | 237 | 139 | 2 | 1 | 237 | 71 | 301 | 6.56e-48 | 167 |
| MS.gene99030.t1 | AT5G13400 | 37.269 | 271 | 160 | 4 | 15 | 281 | 107 | 371 | 1.51e-47 | 167 |
| MS.gene99030.t1 | AT5G46050 | 34.397 | 282 | 170 | 4 | 2 | 281 | 57 | 325 | 7.21e-47 | 165 |
| MS.gene99030.t1 | AT3G45710 | 33.333 | 282 | 176 | 4 | 1 | 281 | 50 | 320 | 2.09e-45 | 161 |
| MS.gene99030.t1 | AT3G45680 | 33.569 | 283 | 174 | 5 | 1 | 281 | 49 | 319 | 2.33e-45 | 160 |
| MS.gene99030.t1 | AT3G45690 | 32.384 | 281 | 173 | 4 | 1 | 281 | 47 | 310 | 2.35e-45 | 160 |
| MS.gene99030.t1 | AT3G45720 | 32.979 | 282 | 176 | 5 | 1 | 281 | 48 | 317 | 1.07e-43 | 156 |
| MS.gene99030.t1 | AT3G54450 | 33.101 | 287 | 162 | 5 | 1 | 281 | 41 | 303 | 4.64e-43 | 154 |
| MS.gene99030.t1 | AT3G45700 | 32.384 | 281 | 174 | 4 | 1 | 281 | 45 | 309 | 6.93e-42 | 151 |
| MS.gene99030.t1 | AT1G12110 | 33.916 | 286 | 178 | 4 | 1 | 281 | 56 | 335 | 7.03e-42 | 152 |
| MS.gene99030.t1 | AT2G26690 | 34.828 | 290 | 163 | 5 | 1 | 281 | 8 | 280 | 7.39e-42 | 151 |
| MS.gene99030.t1 | AT2G26690 | 34.828 | 290 | 163 | 5 | 1 | 281 | 20 | 292 | 8.09e-42 | 151 |
| MS.gene99030.t1 | AT2G26690 | 34.828 | 290 | 163 | 5 | 1 | 281 | 53 | 325 | 1.09e-41 | 151 |
| MS.gene99030.t1 | AT2G40460 | 34.646 | 254 | 158 | 4 | 3 | 255 | 55 | 301 | 5.37e-41 | 149 |
| MS.gene99030.t1 | AT2G37900 | 33.333 | 288 | 167 | 7 | 1 | 281 | 67 | 336 | 5.88e-41 | 149 |
| MS.gene99030.t1 | AT2G37900 | 33.704 | 270 | 154 | 7 | 19 | 281 | 6 | 257 | 6.17e-40 | 145 |
| MS.gene99030.t1 | AT3G53960 | 30.605 | 281 | 185 | 3 | 1 | 281 | 66 | 336 | 1.55e-39 | 145 |
| MS.gene99030.t1 | AT1G59740 | 32.982 | 285 | 176 | 8 | 1 | 281 | 70 | 343 | 3.04e-37 | 139 |
| MS.gene99030.t1 | AT4G21680 | 33.101 | 287 | 176 | 8 | 1 | 281 | 57 | 333 | 2.94e-36 | 136 |
| MS.gene99030.t1 | AT1G32450 | 29.965 | 287 | 189 | 6 | 1 | 281 | 66 | 346 | 2.85e-35 | 134 |
| MS.gene99030.t1 | AT5G46050 | 34.956 | 226 | 132 | 4 | 58 | 281 | 1 | 213 | 4.38e-35 | 132 |
| MS.gene99030.t1 | AT3G21670 | 30.634 | 284 | 184 | 3 | 1 | 281 | 58 | 331 | 6.46e-35 | 132 |
| MS.gene99030.t1 | AT5G19640 | 29.893 | 281 | 187 | 4 | 1 | 281 | 88 | 358 | 2.65e-34 | 131 |
| MS.gene99030.t1 | AT1G72125 | 36.181 | 199 | 113 | 2 | 22 | 216 | 79 | 267 | 4.37e-33 | 127 |
| MS.gene99030.t1 | AT1G22570 | 30.526 | 285 | 154 | 7 | 1 | 256 | 22 | 291 | 1.16e-32 | 125 |
| MS.gene99030.t1 | AT1G22570 | 30.526 | 285 | 154 | 7 | 1 | 256 | 59 | 328 | 1.21e-32 | 126 |
| MS.gene99030.t1 | AT1G72120 | 34.848 | 198 | 115 | 2 | 22 | 215 | 79 | 266 | 1.86e-32 | 125 |
| MS.gene99030.t1 | AT5G11570 | 33.333 | 195 | 121 | 3 | 1 | 193 | 42 | 229 | 1.57e-31 | 122 |
| MS.gene99030.t1 | AT1G22550 | 30.769 | 273 | 159 | 5 | 1 | 263 | 59 | 311 | 3.51e-31 | 122 |
| MS.gene99030.t1 | AT1G33440 | 29.537 | 281 | 185 | 4 | 1 | 281 | 67 | 334 | 6.83e-31 | 121 |
| MS.gene99030.t1 | AT1G72140 | 31.203 | 266 | 152 | 6 | 1 | 242 | 63 | 321 | 4.30e-30 | 119 |
| MS.gene99030.t1 | AT1G22540 | 32.035 | 231 | 138 | 3 | 1 | 224 | 59 | 277 | 1.68e-27 | 111 |
| MS.gene99030.t1 | AT1G72130 | 32.083 | 240 | 140 | 4 | 22 | 258 | 75 | 294 | 4.13e-27 | 110 |
| MS.gene99030.t1 | AT1G27040 | 26.936 | 297 | 172 | 5 | 1 | 281 | 56 | 323 | 2.10e-26 | 108 |
| MS.gene99030.t1 | AT1G27040 | 26.936 | 297 | 172 | 5 | 1 | 281 | 52 | 319 | 2.15e-26 | 108 |
| MS.gene99030.t1 | AT1G27040 | 26.936 | 297 | 172 | 5 | 1 | 281 | 24 | 291 | 2.46e-26 | 108 |
| MS.gene99030.t1 | AT1G69850 | 29.245 | 212 | 145 | 1 | 1 | 212 | 54 | 260 | 1.59e-25 | 106 |
| MS.gene99030.t1 | AT5G62730 | 27.523 | 218 | 136 | 3 | 1 | 214 | 85 | 284 | 5.68e-24 | 101 |
| MS.gene99030.t1 | AT5G62730 | 27.523 | 218 | 136 | 3 | 1 | 214 | 26 | 225 | 6.21e-24 | 101 |
| MS.gene99030.t1 | AT5G14940 | 27.686 | 242 | 144 | 5 | 1 | 226 | 36 | 262 | 1.77e-20 | 91.3 |
| MS.gene99030.t1 | AT3G25280 | 25.692 | 253 | 166 | 4 | 3 | 255 | 52 | 282 | 6.66e-20 | 89.7 |
| MS.gene99030.t1 | AT3G25260 | 26.224 | 286 | 165 | 7 | 1 | 281 | 50 | 294 | 7.72e-20 | 89.4 |
| MS.gene99030.t1 | AT3G01350 | 28.340 | 247 | 141 | 6 | 1 | 226 | 36 | 267 | 2.02e-18 | 85.5 |
| MS.gene99030.t1 | AT1G72130 | 32.402 | 179 | 111 | 3 | 83 | 258 | 5 | 176 | 6.31e-17 | 80.5 |
| MS.gene99030.t1 | AT1G72130 | 32.402 | 179 | 111 | 3 | 83 | 258 | 5 | 176 | 6.31e-17 | 80.5 |
| MS.gene99030.t1 | AT2G38100 | 27.241 | 290 | 165 | 11 | 1 | 281 | 3 | 255 | 1.20e-15 | 77.0 |
| MS.gene99030.t1 | AT2G38100 | 27.241 | 290 | 165 | 11 | 1 | 281 | 19 | 271 | 1.81e-15 | 76.6 |
| MS.gene99030.t1 | AT2G38100 | 27.241 | 290 | 165 | 11 | 1 | 281 | 25 | 277 | 1.83e-15 | 76.6 |
Find 57 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACTCAGTTAGTTGGAAATT+TGG | 0.192292 | 5.4:-27433975 | MS.gene99030:CDS |
| GGATCAATAGTTTCTTTAAT+TGG | 0.208574 | 5.4:-27434058 | MS.gene99030:CDS |
| TCCAATAAAGAACAAAATTA+TGG | 0.209184 | 5.4:+27433920 | None:intergenic |
| AAAATGGCTTTCCCAATTAA+TGG | 0.219508 | 5.4:+27433762 | None:intergenic |
| TGGAGGTAGCTTTGACAAAA+TGG | 0.272360 | 5.4:+27433746 | None:intergenic |
| CAAACTTTGCACCTTTGCTT+GGG | 0.281223 | 5.4:-27435714 | MS.gene99030:CDS |
| TCTTACCAGTAGTGAGAAAA+AGG | 0.283854 | 5.4:+27435639 | None:intergenic |
| ATATGTATAATCTAGGGTTT+TGG | 0.290608 | 5.4:-27433069 | MS.gene99030:intron |
| CCATCAGCATGTTTCTCATT+TGG | 0.294135 | 5.4:+27433801 | None:intergenic |
| CAGAGATATCTTACCTGAAT+TGG | 0.304048 | 5.4:+27433718 | None:intergenic |
| CTTCAAACATTCTAAACATA+TGG | 0.325832 | 5.4:-27435747 | MS.gene99030:CDS |
| TACCTCCAACCAACCAATTC+AGG | 0.327030 | 5.4:-27433731 | MS.gene99030:intron |
| TTTCTAAGCATAGGTTCTTC+AGG | 0.331904 | 5.4:-27434149 | MS.gene99030:CDS |
| ATGGAACAATCGTTAATAAC+TGG | 0.352756 | 5.4:-27433007 | MS.gene99030:CDS |
| TCAAACTTTGCACCTTTGCT+TGG | 0.356089 | 5.4:-27435715 | MS.gene99030:CDS |
| CATCTGTTGTAGGGTCAAAT+TGG | 0.372917 | 5.4:+27434093 | None:intergenic |
| TTATTAACGATTGTTCCATC+TGG | 0.399109 | 5.4:+27433011 | None:intergenic |
| TTTATGATCCTCCATTAATT+GGG | 0.409170 | 5.4:-27433773 | MS.gene99030:CDS |
| TTTAACAAGAGAATTTCATT+TGG | 0.418872 | 5.4:-27435782 | MS.gene99030:CDS |
| CTACTTGCTGGATGCTGACA+AGG | 0.445203 | 5.4:+27432982 | None:intergenic |
| TTCAAACATTCTAAACATAT+GGG | 0.447338 | 5.4:-27435746 | MS.gene99030:CDS |
| GAAAATAACATGCATAAAGT+TGG | 0.456885 | 5.4:+27433942 | None:intergenic |
| ATTTCCAACTAACTGAGTCT+TGG | 0.460264 | 5.4:+27433979 | None:intergenic |
| AGACCATGTAGCATACCATT+TGG | 0.480087 | 5.4:-27434122 | MS.gene99030:CDS |
| ACATCCAAGACTCAGTTAGT+TGG | 0.480364 | 5.4:-27433983 | MS.gene99030:CDS |
| TGATTCAGTGCTTGTTGTTG+AGG | 0.481388 | 5.4:+27434224 | None:intergenic |
| AAACTTTGCACCTTTGCTTG+GGG | 0.491613 | 5.4:-27435713 | MS.gene99030:CDS |
| TGTTGAGGTGTGCAAGATGG+AGG | 0.492532 | 5.4:+27434239 | None:intergenic |
| TCAAATTGGTCAACACCAAA+TGG | 0.504627 | 5.4:+27434107 | None:intergenic |
| GATATCTTACCTGAATTGGT+TGG | 0.509797 | 5.4:+27433722 | None:intergenic |
| TATTAACGATTGTTCCATCT+GGG | 0.516749 | 5.4:+27433012 | None:intergenic |
| TACCTGAATTGGTTGGTTGG+AGG | 0.522484 | 5.4:+27433729 | None:intergenic |
| TCTTACCTGAATTGGTTGGT+TGG | 0.522970 | 5.4:+27433726 | None:intergenic |
| TGTTGTTGAGGTGTGCAAGA+TGG | 0.523961 | 5.4:+27434236 | None:intergenic |
| TTTGACCCTACAACAGATGA+AGG | 0.530476 | 5.4:-27434089 | MS.gene99030:CDS |
| ACTGCAAACTCATCTCAAGT+TGG | 0.533140 | 5.4:-27434194 | MS.gene99030:CDS |
| GGATAAAGCTGCTCTAGTAA+TGG | 0.535483 | 5.4:-27433048 | MS.gene99030:CDS |
| CCAAATGAGAAACATGCTGA+TGG | 0.541793 | 5.4:-27433801 | MS.gene99030:CDS |
| TGTGTAGGTATCAGAAATGA+AGG | 0.542396 | 5.4:+27435690 | None:intergenic |
| GGACTTATATTTCTAAGCAT+AGG | 0.547597 | 5.4:-27434158 | MS.gene99030:CDS |
| CAGCATCCAGCAAGTAGAAG+AGG | 0.547715 | 5.4:-27432976 | None:intergenic |
| ACACCAAATGGTATGCTACA+TGG | 0.566997 | 5.4:+27434119 | None:intergenic |
| AGTCTTGAAGCGACCTGTGT+AGG | 0.571482 | 5.4:+27435675 | None:intergenic |
| TAAAGCTGCTCTAGTAATGG+AGG | 0.575084 | 5.4:-27433045 | MS.gene99030:CDS |
| GTTGAGGTGTGCAAGATGGA+GGG | 0.578009 | 5.4:+27434240 | None:intergenic |
| GAAATGAAGGCCCCAAGCAA+AGG | 0.579837 | 5.4:+27435703 | None:intergenic |
| CAAATGAGAAACATGCTGAT+GGG | 0.584968 | 5.4:-27433800 | MS.gene99030:CDS |
| CAAGATGGAGGGTGTAATTG+TGG | 0.586360 | 5.4:+27434251 | None:intergenic |
| GAGGGTGATTTAAACCCAGA+TGG | 0.591962 | 5.4:-27433026 | MS.gene99030:CDS |
| TTCATTTCTGATACCTACAC+AGG | 0.604988 | 5.4:-27435688 | MS.gene99030:CDS |
| TATGTGCATGTGAAGCCAGA+AGG | 0.611356 | 5.4:-27433888 | MS.gene99030:CDS |
| ATGGCTTTCCCAATTAATGG+AGG | 0.625289 | 5.4:+27433765 | None:intergenic |
| GTATTATACATCATTTACAG+TGG | 0.633719 | 5.4:-27434036 | MS.gene99030:CDS |
| TCAAACATTCTAAACATATG+GGG | 0.640912 | 5.4:-27435745 | MS.gene99030:CDS |
| AACATTCTAAACATATGGGG+TGG | 0.647628 | 5.4:-27435742 | MS.gene99030:CDS |
| AAAGCTGCTCTAGTAATGGA+GGG | 0.659745 | 5.4:-27433044 | MS.gene99030:CDS |
| TAGCAGTGACATTAACAGCA+TGG | 0.663737 | 5.4:-27434277 | MS.gene99030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTAGATATTTAGAAAAA+TGG | + | chr5.4:27434437-27434456 | None:intergenic | 10.0% |
| !! | TATTAAATTATAGAATATCA+AGG | - | chr5.4:27433701-27433720 | MS.gene99030:intron | 10.0% |
| !!! | ATAATAACTTAAATATCTTT+TGG | + | chr5.4:27435643-27435662 | None:intergenic | 10.0% |
| !!! | ATAATTTTCCTTTATAAAAA+TGG | + | chr5.4:27435267-27435286 | None:intergenic | 10.0% |
| !!! | TATCAATGAAATTTTATTTT+TGG | - | chr5.4:27434215-27434234 | MS.gene99030:CDS | 10.0% |
| !!! | TATTTTAATTTTTAAGAAGT+TGG | + | chr5.4:27434314-27434333 | None:intergenic | 10.0% |
| !! | AAATTCATATGTATAATCTA+GGG | - | chr5.4:27435692-27435711 | MS.gene99030:CDS | 15.0% |
| !! | AATATAATAATGATTCCAAA+AGG | + | chr5.4:27435238-27435257 | None:intergenic | 15.0% |
| !! | ATAATAAATAATTCAGTTAG+TGG | - | chr5.4:27433950-27433969 | MS.gene99030:CDS | 15.0% |
| !! | ATGAAATTATTATGTTAAAG+TGG | + | chr5.4:27433832-27433851 | None:intergenic | 15.0% |
| !! | TAAATTCATATGTATAATCT+AGG | - | chr5.4:27435691-27435710 | MS.gene99030:CDS | 15.0% |
| !! | TTTGCGTATTTATTATATTT+AGG | + | chr5.4:27434157-27434176 | None:intergenic | 15.0% |
| !!! | TACTTTTTTTTCTTTTTTGA+GGG | - | chr5.4:27433637-27433656 | MS.gene99030:intron | 15.0% |
| !!! | TTACTTTTTTTTCTTTTTTG+AGG | - | chr5.4:27433636-27433655 | MS.gene99030:intron | 15.0% |
| !!! | TTTAAACAAGATTTCTAAAA+TGG | - | chr5.4:27433235-27433254 | MS.gene99030:intron | 15.0% |
| !! | AATTATAGAATATCAAGGTT+CGG | - | chr5.4:27433706-27433725 | MS.gene99030:intron | 20.0% |
| !! | CATTTCTATTGAAATTGTTA+GGG | - | chr5.4:27434462-27434481 | MS.gene99030:intron | 20.0% |
| !! | TATTTCTTTAACTGTATACA+AGG | + | chr5.4:27433390-27433409 | None:intergenic | 20.0% |
| !! | TCATTTCTATTGAAATTGTT+AGG | - | chr5.4:27434461-27434480 | MS.gene99030:intron | 20.0% |
| !! | TCCAATAAAGAACAAAATTA+TGG | + | chr5.4:27434850-27434869 | None:intergenic | 20.0% |
| !! | TTCAAACATTCTAAACATAT+GGG | - | chr5.4:27433021-27433040 | MS.gene99030:CDS | 20.0% |
| !! | TTTAACAAGAGAATTTCATT+TGG | - | chr5.4:27432985-27433004 | MS.gene99030:CDS | 20.0% |
| !!! | AAAATTTTCAGATATCAAGA+TGG | - | chr5.4:27434253-27434272 | MS.gene99030:CDS | 20.0% |
| !!! | AAATATCTTTTGGCTAAATA+TGG | + | chr5.4:27435633-27435652 | None:intergenic | 20.0% |
| !!! | ACTTTTTTTTCTTTTTTGAG+GGG | - | chr5.4:27433638-27433657 | MS.gene99030:intron | 20.0% |
| !!! | TCCATAATTTTGTTCTTTAT+TGG | - | chr5.4:27434846-27434865 | MS.gene99030:intron | 20.0% |
| !!! | TTTGTTAGCCATTTTTATAA+AGG | - | chr5.4:27435256-27435275 | MS.gene99030:intron | 20.0% |
| !!! | TTTTATGTGCAACAAAATAA+AGG | + | chr5.4:27434021-27434040 | None:intergenic | 20.0% |
| ! | AATAAATGTGAAAGAGACAT+AGG | + | chr5.4:27434118-27434137 | None:intergenic | 25.0% |
| ! | AATAAGTAAAGATTTCTTGC+GGG | + | chr5.4:27435197-27435216 | None:intergenic | 25.0% |
| ! | AATAGACTTAAAAACAGTAC+TGG | - | chr5.4:27433794-27433813 | MS.gene99030:CDS | 25.0% |
| ! | AATATGGAAAAAGTCGTATT+TGG | + | chr5.4:27435617-27435636 | None:intergenic | 25.0% |
| ! | CAATAAGTAAAGATTTCTTG+CGG | + | chr5.4:27435198-27435217 | None:intergenic | 25.0% |
| ! | CTTCAAACATTCTAAACATA+TGG | - | chr5.4:27433020-27433039 | MS.gene99030:CDS | 25.0% |
| ! | GAAAATAACATGCATAAAGT+TGG | + | chr5.4:27434828-27434847 | None:intergenic | 25.0% |
| ! | GGATCAATAGTTTCTTTAAT+TGG | - | chr5.4:27434709-27434728 | MS.gene99030:intron | 25.0% |
| ! | GTATTATACATCATTTACAG+TGG | - | chr5.4:27434731-27434750 | MS.gene99030:intron | 25.0% |
| ! | TCAAACATTCTAAACATATG+GGG | - | chr5.4:27433022-27433041 | MS.gene99030:CDS | 25.0% |
| ! | TTTATGATCCTCCATTAATT+GGG | - | chr5.4:27434994-27435013 | MS.gene99030:intron | 25.0% |
| ! | TTTATTAATATGTGCCCTTA+TGG | - | chr5.4:27434396-27434415 | MS.gene99030:intron | 25.0% |
| !! | CACAAATTTTAAACAAAACG+AGG | - | chr5.4:27433927-27433946 | MS.gene99030:CDS | 25.0% |
| !! | TTTACAACTTATTCACCTTT+TGG | - | chr5.4:27435220-27435239 | MS.gene99030:intron | 25.0% |
| !! | TTTTATGATCCTCCATTAAT+TGG | - | chr5.4:27434993-27435012 | MS.gene99030:intron | 25.0% |
| !!! | ATATGTATAATCTAGGGTTT+TGG | - | chr5.4:27435698-27435717 | MS.gene99030:CDS | 25.0% |
| AAAATGGCTTTCCCAATTAA+TGG | + | chr5.4:27435008-27435027 | None:intergenic | 30.0% | |
| AATGAGTGTGAGGAAATTAA+AGG | - | chr5.4:27435411-27435430 | MS.gene99030:intron | 30.0% | |
| ACAACAGATGAAGGAAAAAA+AGG | - | chr5.4:27434687-27434706 | MS.gene99030:intron | 30.0% | |
| ACTTGCATGTAAATCATTCA+CGG | - | chr5.4:27433665-27433684 | MS.gene99030:intron | 30.0% | |
| AGAAAATAGCAGAAATAGAG+GGG | + | chr5.4:27433506-27433525 | None:intergenic | 30.0% | |
| AGAGAAAATAGCAGAAATAG+AGG | + | chr5.4:27433508-27433527 | None:intergenic | 30.0% | |
| ATAAGTAAAGATTTCTTGCG+GGG | + | chr5.4:27435196-27435215 | None:intergenic | 30.0% | |
| ATGGAACAATCGTTAATAAC+TGG | - | chr5.4:27435760-27435779 | MS.gene99030:CDS | 30.0% | |
| ATTTATCACACTATTGTACG+TGG | + | chr5.4:27433777-27433796 | None:intergenic | 30.0% | |
| CAACAGATGAAGGAAAAAAA+GGG | - | chr5.4:27434688-27434707 | MS.gene99030:intron | 30.0% | |
| CTCAAGAGTCAATTATCATT+AGG | + | chr5.4:27433275-27433294 | None:intergenic | 30.0% | |
| GAGAAAATAGCAGAAATAGA+GGG | + | chr5.4:27433507-27433526 | None:intergenic | 30.0% | |
| TATTAACGATTGTTCCATCT+GGG | + | chr5.4:27435758-27435777 | None:intergenic | 30.0% | |
| TTATTAACGATTGTTCCATC+TGG | + | chr5.4:27435759-27435778 | None:intergenic | 30.0% | |
| ! | ATAATTGACTCTTGAGACTT+AGG | - | chr5.4:27433279-27433298 | MS.gene99030:intron | 30.0% |
| ! | GGACTTATATTTCTAAGCAT+AGG | - | chr5.4:27434609-27434628 | MS.gene99030:intron | 30.0% |
| ! | TTTTTCCTTCATCTGTTGTA+GGG | + | chr5.4:27434686-27434705 | None:intergenic | 30.0% |
| !! | TAGTATTGCACAAGTTTTAG+TGG | - | chr5.4:27434914-27434933 | MS.gene99030:intron | 30.0% |
| !!! | CAAGTTGGTTTTCTATTCAT+GGG | - | chr5.4:27434588-27434607 | MS.gene99030:intron | 30.0% |
| !!! | TCAAGTTGGTTTTCTATTCA+TGG | - | chr5.4:27434587-27434606 | MS.gene99030:intron | 30.0% |
| !!! | TTTTTTCCTTCATCTGTTGT+AGG | + | chr5.4:27434687-27434706 | None:intergenic | 30.0% |
| AAAATAGCAGAAATAGAGGG+GGG | + | chr5.4:27433504-27433523 | None:intergenic | 35.0% | |
| AACATTCTAAACATATGGGG+TGG | - | chr5.4:27433025-27433044 | MS.gene99030:CDS | 35.0% | |
| AGAGGGATAGAAAAAGATAG+AGG | - | chr5.4:27435319-27435338 | MS.gene99030:intron | 35.0% | |
| ATTTCCAACTAACTGAGTCT+TGG | + | chr5.4:27434791-27434810 | None:intergenic | 35.0% | |
| CAAATGAGAAACATGCTGAT+GGG | - | chr5.4:27434967-27434986 | MS.gene99030:intron | 35.0% | |
| CAGAGATATCTTACCTGAAT+TGG | + | chr5.4:27435052-27435071 | None:intergenic | 35.0% | |
| CTAGAAAAAATGCTTCCTTC+TGG | + | chr5.4:27434897-27434916 | None:intergenic | 35.0% | |
| CTTGACCTAGAATGAGTAAT+AGG | + | chr5.4:27435299-27435318 | None:intergenic | 35.0% | |
| CTTGCATGTAAATCATTCAC+GGG | - | chr5.4:27433666-27433685 | MS.gene99030:intron | 35.0% | |
| GAAAATAGCAGAAATAGAGG+GGG | + | chr5.4:27433505-27433524 | None:intergenic | 35.0% | |
| GACATAGCAAATGGCAATAA+TGG | + | chr5.4:27433752-27433771 | None:intergenic | 35.0% | |
| GACTCAGTTAGTTGGAAATT+TGG | - | chr5.4:27434792-27434811 | MS.gene99030:intron | 35.0% | |
| GAGGGATAGAAAAAGATAGA+GGG | - | chr5.4:27435320-27435339 | MS.gene99030:intron | 35.0% | |
| GATATCTTACCTGAATTGGT+TGG | + | chr5.4:27435048-27435067 | None:intergenic | 35.0% | |
| GATGATGTCACGTTAGAAAA+TGG | + | chr5.4:27434057-27434076 | None:intergenic | 35.0% | |
| TAAACTGTTGAATGAGTGTG+AGG | - | chr5.4:27435401-27435420 | MS.gene99030:intron | 35.0% | |
| TAGTGTACATAAAAGCTCTG+TGG | + | chr5.4:27433351-27433370 | None:intergenic | 35.0% | |
| TCAAATTGGTCAACACCAAA+TGG | + | chr5.4:27434663-27434682 | None:intergenic | 35.0% | |
| TCTTACCAGTAGTGAGAAAA+AGG | + | chr5.4:27433131-27433150 | None:intergenic | 35.0% | |
| TGTGATAGAAACACAGAGAT+AGG | - | chr5.4:27435369-27435388 | MS.gene99030:intron | 35.0% | |
| TGTGTAGGTATCAGAAATGA+AGG | + | chr5.4:27433080-27433099 | None:intergenic | 35.0% | |
| TTCATTTCTGATACCTACAC+AGG | - | chr5.4:27433079-27433098 | MS.gene99030:intron | 35.0% | |
| TTTCTAAGCATAGGTTCTTC+AGG | - | chr5.4:27434618-27434637 | MS.gene99030:intron | 35.0% | |
| ! | AAACAGTACTGGAGTTAGAT+TGG | - | chr5.4:27433805-27433824 | MS.gene99030:CDS | 35.0% |
| !! | CACATTAACTTGTGCCATAA+GGG | + | chr5.4:27434413-27434432 | None:intergenic | 35.0% |
| !! | TCACATTAACTTGTGCCATA+AGG | + | chr5.4:27434414-27434433 | None:intergenic | 35.0% |
| AAACTTTGCACCTTTGCTTG+GGG | - | chr5.4:27433054-27433073 | MS.gene99030:CDS | 40.0% | |
| AAATAGCAGAAATAGAGGGG+GGG | + | chr5.4:27433503-27433522 | None:intergenic | 40.0% | |
| ACACCAAATGGTATGCTACA+TGG | + | chr5.4:27434651-27434670 | None:intergenic | 40.0% | |
| ACATCCAAGACTCAGTTAGT+TGG | - | chr5.4:27434784-27434803 | MS.gene99030:intron | 40.0% | |
| ACTCATTCTAGGTCAAGAGA+GGG | - | chr5.4:27435302-27435321 | MS.gene99030:intron | 40.0% | |
| ACTGCAAACTCATCTCAAGT+TGG | - | chr5.4:27434573-27434592 | MS.gene99030:intron | 40.0% | |
| AGACCATGTAGCATACCATT+TGG | - | chr5.4:27434645-27434664 | MS.gene99030:intron | 40.0% | |
| ATGGCTTTCCCAATTAATGG+AGG | + | chr5.4:27435005-27435024 | None:intergenic | 40.0% | |
| CAAACTTTGCACCTTTGCTT+GGG | - | chr5.4:27433053-27433072 | MS.gene99030:CDS | 40.0% | |
| CATCTGTTGTAGGGTCAAAT+TGG | + | chr5.4:27434677-27434696 | None:intergenic | 40.0% | |
| CCAAATGAGAAACATGCTGA+TGG | - | chr5.4:27434966-27434985 | MS.gene99030:intron | 40.0% | |
| CCATCAGCATGTTTCTCATT+TGG | + | chr5.4:27434969-27434988 | None:intergenic | 40.0% | |
| GGATAAAGCTGCTCTAGTAA+TGG | - | chr5.4:27435719-27435738 | MS.gene99030:CDS | 40.0% | |
| GTGCACCTATTACTCATTCT+AGG | - | chr5.4:27435291-27435310 | MS.gene99030:intron | 40.0% | |
| TAAAGCTGCTCTAGTAATGG+AGG | - | chr5.4:27435722-27435741 | MS.gene99030:CDS | 40.0% | |
| TACTCATTCTAGGTCAAGAG+AGG | - | chr5.4:27435301-27435320 | MS.gene99030:intron | 40.0% | |
| TAGCAGTGACATTAACAGCA+TGG | - | chr5.4:27434490-27434509 | MS.gene99030:intron | 40.0% | |
| TCAAACTTTGCACCTTTGCT+TGG | - | chr5.4:27433052-27433071 | MS.gene99030:CDS | 40.0% | |
| TCTTACCTGAATTGGTTGGT+TGG | + | chr5.4:27435044-27435063 | None:intergenic | 40.0% | |
| TGTGAAAGAGACATAGGAAG+TGG | + | chr5.4:27434112-27434131 | None:intergenic | 40.0% | |
| TTTGACCCTACAACAGATGA+AGG | - | chr5.4:27434678-27434697 | MS.gene99030:intron | 40.0% | |
| ! | AAAGCTGCTCTAGTAATGGA+GGG | - | chr5.4:27435723-27435742 | MS.gene99030:CDS | 40.0% |
| ! | TGCTTCCTTTTTCTCACTAC+TGG | - | chr5.4:27433123-27433142 | MS.gene99030:intron | 40.0% |
| !! | TGATTCAGTGCTTGTTGTTG+AGG | + | chr5.4:27434546-27434565 | None:intergenic | 40.0% |
| !! | TGGAGGTAGCTTTGACAAAA+TGG | + | chr5.4:27435024-27435043 | None:intergenic | 40.0% |
| AATAGCAGAAATAGAGGGGG+GGG | + | chr5.4:27433502-27433521 | None:intergenic | 45.0% | |
| GAGGGTGATTTAAACCCAGA+TGG | - | chr5.4:27435741-27435760 | MS.gene99030:CDS | 45.0% | |
| TACCTCCAACCAACCAATTC+AGG | - | chr5.4:27435036-27435055 | MS.gene99030:intron | 45.0% | |
| TACGTGGACGACATAGCAAA+TGG | + | chr5.4:27433761-27433780 | None:intergenic | 45.0% | |
| TATGTGCATGTGAAGCCAGA+AGG | - | chr5.4:27434879-27434898 | MS.gene99030:intron | 45.0% | |
| TGTTGTTGAGGTGTGCAAGA+TGG | + | chr5.4:27434534-27434553 | None:intergenic | 45.0% | |
| ! | CAAGATGGAGGGTGTAATTG+TGG | + | chr5.4:27434519-27434538 | None:intergenic | 45.0% |
| ! | TACCTGAATTGGTTGGTTGG+AGG | + | chr5.4:27435041-27435060 | None:intergenic | 45.0% |
| !! | CTTGCGGGGTTAGTTATTGT+TGG | + | chr5.4:27435182-27435201 | None:intergenic | 45.0% |
| !! | TTATGTTTATTTATTATATA+TGG | - | chr5.4:27435094-27435113 | MS.gene99030:intron | 5.0% |
| !!! | ATATTTTTAATTTTTTTTTG+AGG | + | chr5.4:27434343-27434362 | None:intergenic | 5.0% |
| !!! | TATTTTTAATTTTTTTTTGA+GGG | + | chr5.4:27434342-27434361 | None:intergenic | 5.0% |
| AGTCTTGAAGCGACCTGTGT+AGG | + | chr5.4:27433095-27433114 | None:intergenic | 50.0% | |
| GAAATGAAGGCCCCAAGCAA+AGG | + | chr5.4:27433067-27433086 | None:intergenic | 50.0% | |
| GTTGAGGTGTGCAAGATGGA+GGG | + | chr5.4:27434530-27434549 | None:intergenic | 50.0% | |
| TGTTGAGGTGTGCAAGATGG+AGG | + | chr5.4:27434531-27434550 | None:intergenic | 50.0% | |
| ! | CTACTTGCTGGATGCTGACA+AGG | + | chr5.4:27435788-27435807 | None:intergenic | 50.0% |
| !! | GCGGGGTTAGTTATTGTTGG+TGG | + | chr5.4:27435179-27435198 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 27432977 | 27435812 | 27432977 | ID=MS.gene99030 |
| chr5.4 | mRNA | 27432977 | 27435812 | 27432977 | ID=MS.gene99030.t1;Parent=MS.gene99030 |
| chr5.4 | exon | 27435645 | 27435812 | 27435645 | ID=MS.gene99030.t1.exon1;Parent=MS.gene99030.t1 |
| chr5.4 | CDS | 27435645 | 27435812 | 27435645 | ID=cds.MS.gene99030.t1;Parent=MS.gene99030.t1 |
| chr5.4 | exon | 27433732 | 27434306 | 27433732 | ID=MS.gene99030.t1.exon2;Parent=MS.gene99030.t1 |
| chr5.4 | CDS | 27433732 | 27434306 | 27433732 | ID=cds.MS.gene99030.t1;Parent=MS.gene99030.t1 |
| chr5.4 | exon | 27432977 | 27433076 | 27432977 | ID=MS.gene99030.t1.exon3;Parent=MS.gene99030.t1 |
| chr5.4 | CDS | 27432977 | 27433076 | 27432977 | ID=cds.MS.gene99030.t1;Parent=MS.gene99030.t1 |
| Gene Sequence |
| Protein sequence |
