Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99188.t1 | XP_013444964.1 | 95.2 | 165 | 8 | 0 | 1 | 165 | 95 | 259 | 6.20E-85 | 323.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99188.t1 | Q9AT54 | 31.9 | 182 | 113 | 4 | 6 | 178 | 95 | 274 | 1.4e-21 | 104.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99188.t1 | A0A072TNB8 | 95.2 | 165 | 8 | 0 | 1 | 165 | 95 | 259 | 4.4e-85 | 323.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04932 | MS.gene99188 | 0.817789 | 2.75E-52 | -1.69E-46 |
| MS.gene051517 | MS.gene99188 | 0.812877 | 3.40E-51 | -1.69E-46 |
| MS.gene05240 | MS.gene99188 | 0.817841 | 2.67E-52 | -1.69E-46 |
| MS.gene052606 | MS.gene99188 | 0.80598 | 1.03E-49 | -1.69E-46 |
| MS.gene052702 | MS.gene99188 | 0.850053 | 2.18E-60 | -1.69E-46 |
| MS.gene052703 | MS.gene99188 | 0.812221 | 4.73E-51 | -1.69E-46 |
| MS.gene054742 | MS.gene99188 | 0.817691 | 2.89E-52 | -1.69E-46 |
| MS.gene056590 | MS.gene99188 | 0.862371 | 5.31E-64 | -1.69E-46 |
| MS.gene056591 | MS.gene99188 | 0.861493 | 9.87E-64 | -1.69E-46 |
| MS.gene056688 | MS.gene99188 | 0.809768 | 1.61E-50 | -1.69E-46 |
| MS.gene056694 | MS.gene99188 | 0.8245 | 7.81E-54 | -1.69E-46 |
| MS.gene056697 | MS.gene99188 | 0.848931 | 4.47E-60 | -1.69E-46 |
| MS.gene056856 | MS.gene99188 | 0.826284 | 2.95E-54 | -1.69E-46 |
| MS.gene057261 | MS.gene99188 | 0.800724 | 1.26E-48 | -1.69E-46 |
| MS.gene057544 | MS.gene99188 | 0.823318 | 1.48E-53 | -1.69E-46 |
| MS.gene057717 | MS.gene99188 | 0.805809 | 1.12E-49 | -1.69E-46 |
| MS.gene058067 | MS.gene99188 | 0.802691 | 4.98E-49 | -1.69E-46 |
| MS.gene058381 | MS.gene99188 | 0.809979 | 1.45E-50 | -1.69E-46 |
| MS.gene058603 | MS.gene99188 | 0.820941 | 5.26E-53 | -1.69E-46 |
| MS.gene05926 | MS.gene99188 | 0.840717 | 7.35E-58 | -1.69E-46 |
| MS.gene059315 | MS.gene99188 | 0.81647 | 5.44E-52 | -1.69E-46 |
| MS.gene060087 | MS.gene99188 | 0.833951 | 3.97E-56 | -1.69E-46 |
| MS.gene060405 | MS.gene99188 | 0.807281 | 5.46E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99188.t1 | MTR_8g032950 | 87.027 | 185 | 23 | 1 | 1 | 185 | 95 | 278 | 3.11e-104 | 310 |
| MS.gene99188.t1 | MTR_8g032950 | 84.314 | 51 | 8 | 0 | 191 | 241 | 156 | 206 | 2.08e-14 | 72.4 |
| MS.gene99188.t1 | MTR_4g117960 | 64.848 | 165 | 57 | 1 | 2 | 165 | 95 | 259 | 3.03e-68 | 218 |
| MS.gene99188.t1 | MTR_4g117960 | 61.538 | 52 | 19 | 1 | 191 | 241 | 155 | 206 | 1.22e-11 | 64.3 |
| MS.gene99188.t1 | MTR_4g117970 | 58.757 | 177 | 71 | 2 | 2 | 178 | 70 | 244 | 3.80e-65 | 208 |
| MS.gene99188.t1 | MTR_6g035265 | 55.738 | 183 | 79 | 2 | 3 | 185 | 91 | 271 | 1.33e-61 | 201 |
| MS.gene99188.t1 | MTR_2g034990 | 56.983 | 179 | 73 | 3 | 3 | 178 | 96 | 273 | 1.56e-59 | 195 |
| MS.gene99188.t1 | MTR_6g035185 | 57.229 | 166 | 68 | 1 | 3 | 165 | 96 | 261 | 2.29e-59 | 195 |
| MS.gene99188.t1 | MTR_2g035020 | 56.983 | 179 | 73 | 2 | 3 | 178 | 96 | 273 | 2.76e-58 | 192 |
| MS.gene99188.t1 | MTR_4g117980 | 53.333 | 180 | 80 | 2 | 2 | 178 | 95 | 273 | 3.18e-54 | 181 |
| MS.gene99188.t1 | MTR_2g035040 | 57.325 | 157 | 63 | 3 | 25 | 178 | 23 | 178 | 1.78e-50 | 169 |
| MS.gene99188.t1 | MTR_0536s0020 | 45.405 | 185 | 95 | 2 | 1 | 185 | 99 | 277 | 3.61e-49 | 168 |
| MS.gene99188.t1 | MTR_4g117890 | 46.961 | 181 | 90 | 2 | 1 | 181 | 94 | 268 | 6.88e-49 | 167 |
| MS.gene99188.t1 | MTR_5g029800 | 55.152 | 165 | 71 | 1 | 3 | 164 | 92 | 256 | 2.35e-48 | 166 |
| MS.gene99188.t1 | MTR_7g012120 | 52.121 | 165 | 77 | 2 | 3 | 166 | 101 | 264 | 5.00e-48 | 165 |
| MS.gene99188.t1 | MTR_5g067170 | 53.179 | 173 | 74 | 3 | 3 | 171 | 93 | 262 | 1.30e-47 | 164 |
| MS.gene99188.t1 | MTR_4g118000 | 46.591 | 176 | 85 | 2 | 3 | 178 | 95 | 261 | 5.43e-44 | 154 |
| MS.gene99188.t1 | MTR_4g117950 | 43.716 | 183 | 99 | 2 | 3 | 185 | 86 | 264 | 1.36e-43 | 153 |
| MS.gene99188.t1 | MTR_0536s0010 | 46.914 | 162 | 83 | 1 | 3 | 164 | 100 | 258 | 2.19e-43 | 152 |
| MS.gene99188.t1 | MTR_0536s0030 | 40.000 | 125 | 70 | 1 | 1 | 125 | 61 | 180 | 2.39e-25 | 102 |
| MS.gene99188.t1 | MTR_4g485630 | 33.333 | 183 | 113 | 3 | 3 | 178 | 92 | 272 | 1.46e-23 | 98.6 |
| MS.gene99188.t1 | MTR_5g016660 | 30.539 | 167 | 107 | 3 | 3 | 161 | 97 | 262 | 3.45e-17 | 80.5 |
| MS.gene99188.t1 | MTR_4g031800 | 29.268 | 164 | 111 | 3 | 2 | 164 | 95 | 254 | 5.34e-17 | 80.1 |
| MS.gene99188.t1 | MTR_4g485620 | 28.070 | 171 | 103 | 3 | 10 | 165 | 83 | 248 | 5.68e-16 | 77.0 |
| MS.gene99188.t1 | MTR_4g485640 | 27.673 | 159 | 108 | 3 | 10 | 163 | 292 | 448 | 2.51e-15 | 75.1 |
| MS.gene99188.t1 | MTR_8g044140 | 26.776 | 183 | 120 | 5 | 1 | 173 | 61 | 239 | 1.25e-14 | 72.8 |
| MS.gene99188.t1 | MTR_7g102450 | 32.394 | 142 | 89 | 2 | 27 | 162 | 110 | 250 | 2.37e-14 | 72.0 |
| MS.gene99188.t1 | MTR_7g055710 | 28.235 | 170 | 113 | 3 | 1 | 162 | 96 | 264 | 4.05e-14 | 71.6 |
| MS.gene99188.t1 | MTR_7g070740 | 29.310 | 174 | 106 | 4 | 1 | 162 | 96 | 264 | 4.37e-14 | 71.2 |
| MS.gene99188.t1 | MTR_7g070660 | 27.746 | 173 | 107 | 4 | 1 | 162 | 96 | 261 | 6.23e-13 | 68.2 |
| MS.gene99188.t1 | MTR_7g071040 | 29.412 | 170 | 111 | 3 | 1 | 162 | 102 | 270 | 6.71e-13 | 67.8 |
| MS.gene99188.t1 | MTR_5g045970 | 28.333 | 180 | 115 | 6 | 10 | 178 | 110 | 286 | 9.83e-13 | 67.4 |
| MS.gene99188.t1 | MTR_7g117405 | 30.189 | 159 | 103 | 4 | 10 | 161 | 106 | 263 | 1.08e-12 | 67.4 |
| MS.gene99188.t1 | MTR_7g070930 | 28.824 | 170 | 112 | 3 | 1 | 162 | 99 | 267 | 1.56e-12 | 67.0 |
| MS.gene99188.t1 | MTR_7g070800 | 29.870 | 154 | 100 | 2 | 1 | 147 | 91 | 243 | 1.79e-12 | 66.6 |
| MS.gene99188.t1 | MTR_7g070810 | 27.108 | 166 | 113 | 2 | 1 | 159 | 94 | 258 | 3.02e-12 | 65.9 |
| MS.gene99188.t1 | MTR_1g062380 | 29.834 | 181 | 112 | 6 | 10 | 178 | 110 | 287 | 3.35e-12 | 65.9 |
| MS.gene99188.t1 | MTR_8g066610 | 25.824 | 182 | 120 | 5 | 10 | 178 | 103 | 282 | 3.75e-12 | 65.9 |
| MS.gene99188.t1 | MTR_5g039900 | 24.607 | 191 | 135 | 3 | 3 | 185 | 100 | 289 | 3.93e-12 | 65.5 |
| MS.gene99188.t1 | MTR_7g070860 | 29.870 | 154 | 100 | 2 | 1 | 147 | 92 | 244 | 4.69e-12 | 65.5 |
| MS.gene99188.t1 | MTR_4g108250 | 29.412 | 170 | 111 | 3 | 1 | 162 | 99 | 267 | 6.53e-12 | 65.1 |
| MS.gene99188.t1 | MTR_7g070780 | 30.380 | 158 | 94 | 3 | 1 | 147 | 96 | 248 | 1.03e-11 | 64.3 |
| MS.gene99188.t1 | MTR_5g040030 | 25.269 | 186 | 129 | 4 | 2 | 178 | 100 | 284 | 1.04e-11 | 64.3 |
| MS.gene99188.t1 | MTR_1g040310 | 26.111 | 180 | 122 | 5 | 2 | 173 | 100 | 276 | 1.60e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99188.t1 | AT2G36770 | 29.570 | 186 | 119 | 5 | 10 | 185 | 108 | 291 | 7.80e-17 | 79.7 |
| MS.gene99188.t1 | AT2G36790 | 30.601 | 183 | 115 | 5 | 6 | 178 | 103 | 283 | 1.59e-16 | 78.6 |
| MS.gene99188.t1 | AT2G36750 | 29.730 | 185 | 119 | 6 | 10 | 185 | 104 | 286 | 7.19e-16 | 76.6 |
| MS.gene99188.t1 | AT2G36800 | 29.891 | 184 | 116 | 5 | 6 | 178 | 102 | 283 | 1.50e-15 | 75.9 |
| MS.gene99188.t1 | AT2G15480 | 25.668 | 187 | 126 | 6 | 11 | 189 | 113 | 294 | 4.23e-15 | 74.3 |
| MS.gene99188.t1 | AT2G15480 | 25.668 | 187 | 126 | 6 | 11 | 189 | 113 | 294 | 4.86e-15 | 74.3 |
| MS.gene99188.t1 | AT2G15490 | 25.405 | 185 | 129 | 4 | 11 | 189 | 110 | 291 | 9.84e-15 | 73.2 |
| MS.gene99188.t1 | AT2G15490 | 25.405 | 185 | 129 | 4 | 11 | 189 | 110 | 291 | 1.02e-14 | 73.2 |
| MS.gene99188.t1 | AT4G34135 | 25.714 | 175 | 122 | 3 | 10 | 178 | 113 | 285 | 2.36e-14 | 71.6 |
| MS.gene99188.t1 | AT4G34138 | 26.020 | 196 | 127 | 6 | 11 | 193 | 116 | 306 | 2.88e-14 | 72.0 |
| MS.gene99188.t1 | AT4G34135 | 25.714 | 175 | 122 | 3 | 10 | 178 | 113 | 285 | 3.63e-14 | 71.6 |
| MS.gene99188.t1 | AT4G34131 | 26.744 | 172 | 111 | 3 | 3 | 164 | 105 | 271 | 3.97e-14 | 71.6 |
Find 68 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATATGAACGGTTTATTCTT+AGG | 0.144843 | 8.4:-26761615 | None:intergenic |
| AATATGAGCGGTTTATTCTT+AGG | 0.183552 | 8.4:-26759081 | None:intergenic |
| GTGATAGAATGAGGAAAATT+TGG | 0.221472 | 8.4:-26759139 | None:intergenic |
| GTGATAGAATGAGGAAAATT+TGG | 0.221472 | 8.4:-26761673 | None:intergenic |
| CTTCTCCACGAATTCTCTAA+TGG | 0.295516 | 8.4:-26758933 | None:intergenic |
| GGTGGAGATATGAGGCTTAT+TGG | 0.302805 | 8.4:-26759011 | None:intergenic |
| CATTGCACCTTTACATATCT+TGG | 0.306161 | 8.4:-26758897 | None:intergenic |
| CATTGCACCTTTAGATATCT+TGG | 0.312214 | 8.4:-26761431 | None:intergenic |
| AACAACTTTGCTGAACTTGA+TGG | 0.353410 | 8.4:+26759247 | MS.gene99188:CDS |
| GATATCTTGGCCATTGTGGC+AGG | 0.374402 | 8.4:-26761418 | None:intergenic |
| TCAAATGCGATGTATAGTTT+TGG | 0.374670 | 8.4:-26759178 | None:intergenic |
| GGCCATTGTGGCAGGGTCCA+TGG | 0.383914 | 8.4:-26761410 | None:intergenic |
| TTCTCCACGAATTCTCTAAT+GGG | 0.390301 | 8.4:-26758932 | None:intergenic |
| ATATGAACGGTTTATTCTTA+GGG | 0.398146 | 8.4:-26761614 | None:intergenic |
| ATATGAGCGGTTTATTCTTA+GGG | 0.405201 | 8.4:-26759080 | None:intergenic |
| CGAATTCTCTAATGGGTTCA+TGG | 0.405717 | 8.4:-26758925 | None:intergenic |
| GGTAACAAGGCTTGGCATCT+TGG | 0.424859 | 8.4:+26759304 | MS.gene99188:CDS |
| TGAGGCAATCCGCAAAAGTA+AGG | 0.442335 | 8.4:+26759213 | MS.gene99188:CDS |
| AAAACTATACATCGCATTTG+AGG | 0.468748 | 8.4:+26759180 | MS.gene99188:CDS |
| TTATTCTTAGGGATTCTATG+AGG | 0.473109 | 8.4:-26759069 | None:intergenic |
| TTGCCGACTGTGTATACCCT+TGG | 0.475253 | 8.4:+26758975 | MS.gene99188:CDS |
| TCATATGCGATGAATAGCTT+TGG | 0.481695 | 8.4:-26761712 | None:intergenic |
| GGACAATGATTCAATGCCTT+CGG | 0.482003 | 8.4:-26761383 | None:intergenic |
| CTTTGGTGGTGTTGAGCAAA+AGG | 0.483097 | 8.4:-26761695 | None:intergenic |
| ATACCCTTGGATTAATGACT+TGG | 0.488317 | 8.4:+26758988 | MS.gene99188:CDS |
| CACCATGGACCCTGCCACAA+TGG | 0.489835 | 8.4:+26761408 | MS.gene99188:CDS |
| CAGTCGGCAATGATGTAGTC+AGG | 0.498245 | 8.4:-26758962 | None:intergenic |
| TGAACCCATTAGAGAATTCG+TGG | 0.503916 | 8.4:+26758928 | MS.gene99188:CDS |
| AAACCATGGGTAACAAGGCT+TGG | 0.509918 | 8.4:+26759296 | MS.gene99188:CDS |
| TGTGGCAGGGTCCATGGTGG+AGG | 0.511571 | 8.4:-26761404 | None:intergenic |
| ACCTTTACATATCTTGGCCA+TGG | 0.518558 | 8.4:-26758891 | None:intergenic |
| AAAGCTATTCATCGCATATG+AGG | 0.520287 | 8.4:+26761714 | MS.gene99188:CDS |
| AAGGCAATGGTGGAGATATG+AGG | 0.540237 | 8.4:-26759019 | None:intergenic |
| GAGCAAAAGGTGATAGAATG+AGG | 0.544326 | 8.4:-26761682 | None:intergenic |
| ATGCCAAGCCTTGTTACCCA+TGG | 0.547383 | 8.4:-26759299 | None:intergenic |
| AATTCTTGTCAGAATATGAA+CGG | 0.562592 | 8.4:-26761627 | None:intergenic |
| ACAATGGCCAAGATATCTAA+AGG | 0.563087 | 8.4:+26761424 | MS.gene99188:CDS |
| TTGGCCAAGTCATTAATCCA+AGG | 0.563466 | 8.4:-26758992 | None:intergenic |
| ATATCTTGGCCATTGTGGCA+GGG | 0.564561 | 8.4:-26761417 | None:intergenic |
| GAGGAAAAGGTGATAGAATG+AGG | 0.565861 | 8.4:-26759148 | None:intergenic |
| CATTAGAGAATTCGTGGAGA+AGG | 0.573370 | 8.4:+26758934 | MS.gene99188:CDS |
| TATTCTTAGGGATTCTATGA+GGG | 0.574610 | 8.4:-26759068 | None:intergenic |
| TATACATCGCATTTGAGGAA+AGG | 0.579837 | 8.4:+26759185 | MS.gene99188:CDS |
| TATGCGATGAATAGCTTTGG+TGG | 0.580176 | 8.4:-26761709 | None:intergenic |
| ACCATGGCCAAGATATGTAA+AGG | 0.580374 | 8.4:+26758890 | None:intergenic |
| GAAGAATGCGGTGAAGGCAA+TGG | 0.587503 | 8.4:-26759032 | None:intergenic |
| TTTAGATATCTTGGCCATTG+TGG | 0.587530 | 8.4:-26761422 | None:intergenic |
| GAATGCGGTGAAGGCAATGG+TGG | 0.589149 | 8.4:-26759029 | None:intergenic |
| TGGCCAAGTCATTAATCCAA+GGG | 0.592379 | 8.4:-26758991 | None:intergenic |
| TGAGAAAACCATGGGTAACA+AGG | 0.593973 | 8.4:+26759291 | MS.gene99188:CDS |
| TATGAGGGGAAATGAGAGTG+TGG | 0.597887 | 8.4:+26759366 | MS.gene99188:CDS |
| CTATGAGGGATACTGTAAAG+AGG | 0.601294 | 8.4:-26759054 | None:intergenic |
| TATTCATCGCATATGAGGAA+AGG | 0.605602 | 8.4:+26761719 | MS.gene99188:CDS |
| CATTGTGGCAGGGTCCATGG+TGG | 0.608594 | 8.4:-26761407 | None:intergenic |
| CAGCAAGTCGACCTTTCCGA+AGG | 0.609895 | 8.4:+26761367 | MS.gene99188:intron |
| AAAGAGGAAGAATGCGGTGA+AGG | 0.610474 | 8.4:-26759038 | None:intergenic |
| GAGGCAATCCGCAAAAGTAA+GGG | 0.610869 | 8.4:+26759214 | MS.gene99188:CDS |
| CAAACACTATGAGAAAACCA+TGG | 0.618415 | 8.4:+26759282 | MS.gene99188:CDS |
| ATGATTCAATGCCTTCGGAA+AGG | 0.618932 | 8.4:-26761378 | None:intergenic |
| ATTTGAGGAAAGGATGCTTG+AGG | 0.620323 | 8.4:+26759195 | MS.gene99188:CDS |
| TGAATCATTGTCCTCCACCA+TGG | 0.624200 | 8.4:+26761393 | MS.gene99188:CDS |
| AGTTCTTGTCAGAATATGAG+CGG | 0.636501 | 8.4:-26759093 | None:intergenic |
| AGGAAAATTTGGAACAACGA+AGG | 0.637528 | 8.4:-26761662 | None:intergenic |
| AATCCAAGGGTATACACAGT+CGG | 0.638606 | 8.4:-26758978 | None:intergenic |
| AAACACTATGAGAAAACCAT+GGG | 0.643342 | 8.4:+26759283 | MS.gene99188:CDS |
| TTTGAAGAGAAATCTATGAG+GGG | 0.678641 | 8.4:+26759352 | MS.gene99188:CDS |
| TACTGTAAAGAGGAAGAATG+CGG | 0.695334 | 8.4:-26759044 | None:intergenic |
| ATTCTCTAATGGGTTCATGG+AGG | 0.749674 | 8.4:-26758922 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATCTATAATTGTTAATAA+AGG | + | chr8.4:26760164-26760183 | MS.gene99188:intron | 10.0% |
| !! | AAAAAAAGAAAAAGAATTAG+AGG | + | chr8.4:26761062-26761081 | MS.gene99188:intron | 15.0% |
| !! | AAAGTAAATTGCAAATAAAA+AGG | - | chr8.4:26760348-26760367 | None:intergenic | 15.0% |
| !! | AGTTTAATACACATAATATT+AGG | - | chr8.4:26760094-26760113 | None:intergenic | 15.0% |
| !! | ATTTATTATAGGAATAAATG+AGG | + | chr8.4:26760892-26760911 | MS.gene99188:intron | 15.0% |
| !!! | AAATATATAAGCTCTTTTTT+TGG | + | chr8.4:26761169-26761188 | MS.gene99188:intron | 15.0% |
| !!! | TTTTTTTGAATATTTGCAAA+AGG | - | chr8.4:26760239-26760258 | None:intergenic | 15.0% |
| !! | AAAAAATGACCAAATCAATA+CGG | + | chr8.4:26760499-26760518 | MS.gene99188:intron | 20.0% |
| !! | AAATGATATGTAAATTTCAG+CGG | - | chr8.4:26760558-26760577 | None:intergenic | 20.0% |
| !! | AATAAAAGGAACCAAAATAA+AGG | - | chr8.4:26760715-26760734 | None:intergenic | 20.0% |
| !! | AGAAACATTGAAAATAAGAA+AGG | + | chr8.4:26759616-26759635 | MS.gene99188:intron | 20.0% |
| !! | ATAAAAGGAACCAAAATAAA+GGG | - | chr8.4:26760714-26760733 | None:intergenic | 20.0% |
| !! | ATACACATAATATTAGGATT+TGG | - | chr8.4:26760088-26760107 | None:intergenic | 20.0% |
| !! | CAAAAAAAAAGGAATAAATG+AGG | + | chr8.4:26761106-26761125 | MS.gene99188:intron | 20.0% |
| !!! | AAATCAATTGATGTGTTTTT+TGG | + | chr8.4:26760672-26760691 | MS.gene99188:intron | 20.0% |
| !!! | AGCTTATATATTTTTCTCAT+AGG | - | chr8.4:26761162-26761181 | None:intergenic | 20.0% |
| !!! | ATAAGAAAGGTTTTATCATT+AGG | + | chr8.4:26759629-26759648 | MS.gene99188:intron | 20.0% |
| !!! | CTCATTTATTCCTTTTTTTT+TGG | - | chr8.4:26761108-26761127 | None:intergenic | 20.0% |
| !!! | CTTTGTTTATATTTCTCATA+GGG | - | chr8.4:26760856-26760875 | None:intergenic | 20.0% |
| !!! | GCTTATATATTTTTCTCATA+GGG | - | chr8.4:26761161-26761180 | None:intergenic | 20.0% |
| !!! | TAAGAAAGGTTTTATCATTA+GGG | + | chr8.4:26759630-26759649 | MS.gene99188:intron | 20.0% |
| !!! | TTACAATTTTTATTTGACAG+TGG | + | chr8.4:26760634-26760653 | MS.gene99188:intron | 20.0% |
| ! | AAACAAAGCTCCAAAAAAAA+AGG | + | chr8.4:26761095-26761114 | MS.gene99188:intron | 25.0% |
| ! | AATATGAACGGTTTATTCTT+AGG | - | chr8.4:26761618-26761637 | None:intergenic | 25.0% |
| ! | AATCTCGTAAAGTTGTTTAT+CGG | - | chr8.4:26759479-26759498 | None:intergenic | 25.0% |
| ! | AATTCTTGTCAGAATATGAA+CGG | - | chr8.4:26761630-26761649 | None:intergenic | 25.0% |
| ! | ACAATGCATAAAATATGCAA+AGG | - | chr8.4:26761220-26761239 | None:intergenic | 25.0% |
| ! | ATAAAGGCAATACATCTATT+TGG | + | chr8.4:26760180-26760199 | MS.gene99188:intron | 25.0% |
| ! | ATATGAACGGTTTATTCTTA+GGG | - | chr8.4:26761617-26761636 | None:intergenic | 25.0% |
| ! | TCAAAAAAAAACTAAGCAAG+TGG | + | chr8.4:26760250-26760269 | MS.gene99188:intron | 25.0% |
| ! | TGGTCATATTATGTTATTCT+TGG | + | chr8.4:26760436-26760455 | MS.gene99188:intron | 25.0% |
| ! | TTATAAAGGAAAAGAGAAAG+TGG | + | chr8.4:26759864-26759883 | MS.gene99188:intron | 25.0% |
| ! | TTGTGAATTTAAACAGTTGT+CGG | + | chr8.4:26760609-26760628 | MS.gene99188:intron | 25.0% |
| ! | TTTGAATATTTGCAAAAGGT+GGG | - | chr8.4:26760235-26760254 | None:intergenic | 25.0% |
| !! | CAGTGTTATACATATGTTTT+GGG | + | chr8.4:26759437-26759456 | MS.gene99188:intron | 25.0% |
| !! | GATGATAAAAAGCAAACTTT+TGG | - | chr8.4:26760584-26760603 | None:intergenic | 25.0% |
| !! | TACATTTAGAATAATGAACC+TGG | + | chr8.4:26760387-26760406 | MS.gene99188:intron | 25.0% |
| !! | TCAGTGTTATACATATGTTT+TGG | + | chr8.4:26759436-26759455 | MS.gene99188:intron | 25.0% |
| !! | TTTTGAATATTTGCAAAAGG+TGG | - | chr8.4:26760236-26760255 | None:intergenic | 25.0% |
| !!! | AAGAAAGGTTTTATCATTAG+GGG | + | chr8.4:26759631-26759650 | MS.gene99188:intron | 25.0% |
| !!! | CTTTTTTTTTTCTTTCGTAC+CGG | - | chr8.4:26761050-26761069 | None:intergenic | 25.0% |
| !!! | GCTTTGTTTATATTTCTCAT+AGG | - | chr8.4:26760857-26760876 | None:intergenic | 25.0% |
| !!! | GTTTTTTGGAATCTTCATTT+TGG | + | chr8.4:26760686-26760705 | MS.gene99188:intron | 25.0% |
| !!! | TATATAAGCTCTTTTTTTGG+TGG | + | chr8.4:26761172-26761191 | MS.gene99188:intron | 25.0% |
| !!! | TTGCGTTTCTTTTTGAAATA+TGG | - | chr8.4:26760286-26760305 | None:intergenic | 25.0% |
| !!! | TTTTGAAGAGAAATCTATGA+GGG | + | chr8.4:26759351-26759370 | MS.gene99188:CDS | 25.0% |
| AAAAAAACTAAGCAAGTGGA+AGG | + | chr8.4:26760254-26760273 | MS.gene99188:intron | 30.0% | |
| AAAACTATACATCGCATTTG+AGG | + | chr8.4:26759180-26759199 | MS.gene99188:CDS | 30.0% | |
| AAACACTATGAGAAAACCAT+GGG | + | chr8.4:26759283-26759302 | MS.gene99188:CDS | 30.0% | |
| AATATGAGCGGTTTATTCTT+AGG | - | chr8.4:26759084-26759103 | None:intergenic | 30.0% | |
| ATAAAATATGCAAAGGTCTG+GGG | - | chr8.4:26761213-26761232 | None:intergenic | 30.0% | |
| ATAACCTTGGATTAATGACT+TGG | + | chr8.4:26761522-26761541 | MS.gene99188:intron | 30.0% | |
| ATAGTATAGAAAAAGCTGTG+AGG | + | chr8.4:26759896-26759915 | MS.gene99188:intron | 30.0% | |
| ATATGAGCGGTTTATTCTTA+GGG | - | chr8.4:26759083-26759102 | None:intergenic | 30.0% | |
| ATATTTCTCATAGGGACTAA+AGG | - | chr8.4:26760848-26760867 | None:intergenic | 30.0% | |
| CATAAAATATGCAAAGGTCT+GGG | - | chr8.4:26761214-26761233 | None:intergenic | 30.0% | |
| GCTTAAAATCATTACTTGTG+GGG | - | chr8.4:26759662-26759681 | None:intergenic | 30.0% | |
| GGCTTAAAATCATTACTTGT+GGG | - | chr8.4:26759663-26759682 | None:intergenic | 30.0% | |
| GTGATAGAATGAGGAAAATT+TGG | - | chr8.4:26759142-26759161 | None:intergenic | 30.0% | |
| TATTCTTAGGGATTCTATGA+GGG | - | chr8.4:26759071-26759090 | None:intergenic | 30.0% | |
| TATTTCTCATAGGGACTAAA+GGG | - | chr8.4:26760847-26760866 | None:intergenic | 30.0% | |
| TGGATTATTCAAGTGATTTG+CGG | - | chr8.4:26760068-26760087 | None:intergenic | 30.0% | |
| TGGCTTAAAATCATTACTTG+TGG | - | chr8.4:26759664-26759683 | None:intergenic | 30.0% | |
| TTATTCTTAGGGATTCTATG+AGG | - | chr8.4:26759072-26759091 | None:intergenic | 30.0% | |
| TTGAATATTTGCAAAAGGTG+GGG | - | chr8.4:26760234-26760253 | None:intergenic | 30.0% | |
| TTTGAAGAGAAATCTATGAG+GGG | + | chr8.4:26759352-26759371 | MS.gene99188:CDS | 30.0% | |
| ! | ATTTTTCTCATAGGGACTAA+AGG | - | chr8.4:26761153-26761172 | None:intergenic | 30.0% |
| ! | TAATACTATTTTCGATTCCC+AGG | + | chr8.4:26760950-26760969 | MS.gene99188:intron | 30.0% |
| ! | TCAAATGCGATGTATAGTTT+TGG | - | chr8.4:26759181-26759200 | None:intergenic | 30.0% |
| ! | TTTTTCTCATAGGGACTAAA+GGG | - | chr8.4:26761152-26761171 | None:intergenic | 30.0% |
| !! | AAACTGATTCCGTATTGATT+TGG | - | chr8.4:26760511-26760530 | None:intergenic | 30.0% |
| !! | AGAAAGGTTTTATCATTAGG+GGG | + | chr8.4:26759632-26759651 | MS.gene99188:intron | 30.0% |
| !! | CTTTTGAAGAGAAATCTATG+AGG | + | chr8.4:26759350-26759369 | MS.gene99188:CDS | 30.0% |
| !!! | CATTTTGGTTCCCTTTATTT+TGG | + | chr8.4:26760701-26760720 | MS.gene99188:intron | 30.0% |
| AAAGAAAAGTGGTTGCCTAA+AGG | + | chr8.4:26759583-26759602 | MS.gene99188:intron | 35.0% | |
| AAAGCTATTCATCGCATATG+AGG | + | chr8.4:26761714-26761733 | MS.gene99188:CDS | 35.0% | |
| AACAACTTTGCTGAACTTGA+TGG | + | chr8.4:26759247-26759266 | MS.gene99188:CDS | 35.0% | |
| AAGAGAGAAAGAAAAGGAGA+AGG | + | chr8.4:26760410-26760429 | MS.gene99188:intron | 35.0% | |
| AATCCAAGGTTATACACAGT+CGG | - | chr8.4:26761515-26761534 | None:intergenic | 35.0% | |
| ACAATGGCCAAGATATCTAA+AGG | + | chr8.4:26761424-26761443 | MS.gene99188:CDS | 35.0% | |
| AGTTCTTGTCAGAATATGAG+CGG | - | chr8.4:26759096-26759115 | None:intergenic | 35.0% | |
| ATACCCTTGGATTAATGACT+TGG | + | chr8.4:26758988-26759007 | MS.gene99188:CDS | 35.0% | |
| ATTCAGGTCACGAATTTGTA+TGG | + | chr8.4:26759515-26759534 | MS.gene99188:intron | 35.0% | |
| CAAACACTATGAGAAAACCA+TGG | + | chr8.4:26759282-26759301 | MS.gene99188:CDS | 35.0% | |
| CAATACGGAATCAGTTTAGA+AGG | + | chr8.4:26760514-26760533 | MS.gene99188:intron | 35.0% | |
| CATTGCACCTTTACATATCT+TGG | - | chr8.4:26758900-26758919 | None:intergenic | 35.0% | |
| CATTGCACCTTTAGATATCT+TGG | - | chr8.4:26761434-26761453 | None:intergenic | 35.0% | |
| GAAAAAAGATGAGAGTGAAG+AGG | + | chr8.4:26759558-26759577 | MS.gene99188:intron | 35.0% | |
| GCATAAAATATGCAAAGGTC+TGG | - | chr8.4:26761215-26761234 | None:intergenic | 35.0% | |
| GCTCTTTCATGTTAAAAGTG+AGG | + | chr8.4:26760308-26760327 | MS.gene99188:intron | 35.0% | |
| GGCAAAAAGGGTAAGAAAAT+AGG | - | chr8.4:26760211-26760230 | None:intergenic | 35.0% | |
| GTCGTCTCATAACAATTTGT+TGG | + | chr8.4:26760011-26760030 | MS.gene99188:intron | 35.0% | |
| TACTGTAAAGAGGAAGAATG+CGG | - | chr8.4:26759047-26759066 | None:intergenic | 35.0% | |
| TATACATCGCATTTGAGGAA+AGG | + | chr8.4:26759185-26759204 | MS.gene99188:CDS | 35.0% | |
| TATTCATCGCATATGAGGAA+AGG | + | chr8.4:26761719-26761738 | MS.gene99188:CDS | 35.0% | |
| TCATATGCGATGAATAGCTT+TGG | - | chr8.4:26761715-26761734 | None:intergenic | 35.0% | |
| TGAATATTTGCAAAAGGTGG+GGG | - | chr8.4:26760233-26760252 | None:intergenic | 35.0% | |
| TGGTCTGTACATGGTTATAA+AGG | + | chr8.4:26759850-26759869 | MS.gene99188:intron | 35.0% | |
| TTCAGGTCACGAATTTGTAT+GGG | + | chr8.4:26759516-26759535 | MS.gene99188:intron | 35.0% | |
| TTCTCCACGAATTCTCTAAT+GGG | - | chr8.4:26758935-26758954 | None:intergenic | 35.0% | |
| TTTAGATATCTTGGCCATTG+TGG | - | chr8.4:26761425-26761444 | None:intergenic | 35.0% | |
| TTTCTCTCTTCGAATCCTTT+AGG | - | chr8.4:26759601-26759620 | None:intergenic | 35.0% | |
| ! | ACAATTTTTCCGTTCAGTGA+CGG | - | chr8.4:26760127-26760146 | None:intergenic | 35.0% |
| ! | AGGAAAATTTGGAACAACGA+AGG | - | chr8.4:26761665-26761684 | None:intergenic | 35.0% |
| ! | GTTTTGCGAATAAGACAAGT+TGG | - | chr8.4:26759331-26759350 | None:intergenic | 35.0% |
| ! | TTTTGCAGCACATACTCTTA+CGG | - | chr8.4:26760465-26760484 | None:intergenic | 35.0% |
| !! | TTATGAGTCCCTTACTTTTG+CGG | - | chr8.4:26759225-26759244 | None:intergenic | 35.0% |
| !!! | ATAAGCTCTTTTTTTGGTGG+TGG | + | chr8.4:26761175-26761194 | MS.gene99188:intron | 35.0% |
| !!! | GTATAGTTTTGGTGTTGTTG+AGG | - | chr8.4:26759170-26759189 | None:intergenic | 35.0% |
| !!! | TCTTTTTTCCCTTTCTTCTC+AGG | - | chr8.4:26759547-26759566 | None:intergenic | 35.0% |
| !!! | TTTTGGTGTTGTTGAGGAAA+AGG | - | chr8.4:26759164-26759183 | None:intergenic | 35.0% |
| AAAACTAAGCAAGTGGAAGG+TGG | + | chr8.4:26760257-26760276 | MS.gene99188:intron | 40.0% | |
| AAAAGCTGTGAGGAGATTGA+TGG | + | chr8.4:26759906-26759925 | MS.gene99188:intron | 40.0% | |
| AAAGAGTGAGTATCCGTTGA+AGG | - | chr8.4:26761575-26761594 | None:intergenic | 40.0% | |
| ACCTGGAAGAGAGAAAGAAA+AGG | + | chr8.4:26760404-26760423 | MS.gene99188:intron | 40.0% | |
| ATAACTGTTGTGCGAAGGAT+TGG | + | chr8.4:26759805-26759824 | MS.gene99188:intron | 40.0% | |
| ATGATTCAATGCCTTCGGAA+AGG | - | chr8.4:26761381-26761400 | None:intergenic | 40.0% | |
| ATTAGTCACCCACCTTTGAT+GGG | + | chr8.4:26761017-26761036 | MS.gene99188:intron | 40.0% | |
| ATTTGAGGAAAGGATGCTTG+AGG | + | chr8.4:26759195-26759214 | MS.gene99188:CDS | 40.0% | |
| CATTAGAGAATTCGTGGAGA+AGG | + | chr8.4:26758934-26758953 | MS.gene99188:CDS | 40.0% | |
| CTATGAGGGATACTGTAAAG+AGG | - | chr8.4:26759057-26759076 | None:intergenic | 40.0% | |
| CTTCTCCACGAATTCTCTAA+TGG | - | chr8.4:26758936-26758955 | None:intergenic | 40.0% | |
| GAAAGAAAAGGAGAAGGAGA+TGG | + | chr8.4:26760416-26760435 | MS.gene99188:intron | 40.0% | |
| GAATATTTGCAAAAGGTGGG+GGG | - | chr8.4:26760232-26760251 | None:intergenic | 40.0% | |
| GAGCAAAAGGTGATAGAATG+AGG | - | chr8.4:26761685-26761704 | None:intergenic | 40.0% | |
| GAGGAAAAGGTGATAGAATG+AGG | - | chr8.4:26759151-26759170 | None:intergenic | 40.0% | |
| GGACAATGATTCAATGCCTT+CGG | - | chr8.4:26761386-26761405 | None:intergenic | 40.0% | |
| GTGAAGAGGAGAAAGAAAAG+TGG | + | chr8.4:26759572-26759591 | MS.gene99188:intron | 40.0% | |
| TAACTGTTGTGCGAAGGATT+GGG | + | chr8.4:26759806-26759825 | MS.gene99188:intron | 40.0% | |
| TGAACCCATTAGAGAATTCG+TGG | + | chr8.4:26758928-26758947 | MS.gene99188:CDS | 40.0% | |
| TGAGAAAACCATGGGTAACA+AGG | + | chr8.4:26759291-26759310 | MS.gene99188:CDS | 40.0% | |
| TGGCCAAGTCATTAATCCAA+GGG | - | chr8.4:26758994-26759013 | None:intergenic | 40.0% | |
| TTCGCCAAGTCATTAATCCA+AGG | - | chr8.4:26761529-26761548 | None:intergenic | 40.0% | |
| TTGGCCAAGTCATTAATCCA+AGG | - | chr8.4:26758995-26759014 | None:intergenic | 40.0% | |
| ! | AATCCAAGGGTATACACAGT+CGG | - | chr8.4:26758981-26759000 | None:intergenic | 40.0% |
| ! | CAATTTTTCCGTTCAGTGAC+GGG | - | chr8.4:26760126-26760145 | None:intergenic | 40.0% |
| ! | TCCTTTTCTTTCTCTCTTCC+AGG | - | chr8.4:26760408-26760427 | None:intergenic | 40.0% |
| !! | AAGGTTTTATCATTAGGGGG+TGG | + | chr8.4:26759635-26759654 | MS.gene99188:intron | 40.0% |
| !! | AGGTTTTATCATTAGGGGGT+GGG | + | chr8.4:26759636-26759655 | MS.gene99188:intron | 40.0% |
| !! | ATTCTCTAATGGGTTCATGG+AGG | - | chr8.4:26758925-26758944 | None:intergenic | 40.0% |
| !! | CGAATTCTCTAATGGGTTCA+TGG | - | chr8.4:26758928-26758947 | None:intergenic | 40.0% |
| !! | TATGCGATGAATAGCTTTGG+TGG | - | chr8.4:26761712-26761731 | None:intergenic | 40.0% |
| AAACCATGGGTAACAAGGCT+TGG | + | chr8.4:26759296-26759315 | MS.gene99188:CDS | 45.0% | |
| AAAGAGGAAGAATGCGGTGA+AGG | - | chr8.4:26759041-26759060 | None:intergenic | 45.0% | |
| AACTGTTGTGCGAAGGATTG+GGG | + | chr8.4:26759807-26759826 | MS.gene99188:intron | 45.0% | |
| ACACATGCTGTTGAAGAAGG+TGG | + | chr8.4:26759988-26760007 | MS.gene99188:intron | 45.0% | |
| AGCTGATAACTGTTGTGCGA+AGG | + | chr8.4:26759800-26759819 | MS.gene99188:intron | 45.0% | |
| AGGGGAACTAGATGATGTGA+AGG | - | chr8.4:26761345-26761364 | None:intergenic | 45.0% | |
| ATATCTTGGCCATTGTGGCA+GGG | - | chr8.4:26761420-26761439 | None:intergenic | 45.0% | |
| ATCGACAGAGGAGAGAGATT+TGG | - | chr8.4:26761308-26761327 | None:intergenic | 45.0% | |
| ATCTCCACCATTGCCTTCAA+CGG | + | chr8.4:26761559-26761578 | MS.gene99188:intron | 45.0% | |
| CAACTTTACGAGATTGCGAG+CGG | + | chr8.4:26759484-26759503 | MS.gene99188:intron | 45.0% | |
| CACATGCTGTTGAAGAAGGT+GGG | + | chr8.4:26759989-26760008 | MS.gene99188:intron | 45.0% | |
| GAGGCAATCCGCAAAAGTAA+GGG | + | chr8.4:26759214-26759233 | MS.gene99188:CDS | 45.0% | |
| GCGAGCGGAATAGAAAATTC+AGG | + | chr8.4:26759499-26759518 | MS.gene99188:intron | 45.0% | |
| GCTACACATGCTGTTGAAGA+AGG | + | chr8.4:26759985-26760004 | MS.gene99188:intron | 45.0% | |
| GGAAAAGAGAAAGTGGTGAG+TGG | + | chr8.4:26759871-26759890 | MS.gene99188:intron | 45.0% | |
| GGAACTAGATGATGTGAAGG+CGG | - | chr8.4:26761342-26761361 | None:intergenic | 45.0% | |
| GGGTTGTTCCTGAGAAGAAA+GGG | + | chr8.4:26759536-26759555 | MS.gene99188:intron | 45.0% | |
| GGTGCATTCATGACACATTG+CGG | + | chr8.4:26759694-26759713 | MS.gene99188:intron | 45.0% | |
| GGTGGAGATATGAGGCTTAT+TGG | - | chr8.4:26759014-26759033 | None:intergenic | 45.0% | |
| GTGCATTCATGACACATTGC+GGG | + | chr8.4:26759695-26759714 | MS.gene99188:intron | 45.0% | |
| TAGAACTGTTCTCCTTGCAC+AGG | - | chr8.4:26759772-26759791 | None:intergenic | 45.0% | |
| TATGAGGGGAAATGAGAGTG+TGG | + | chr8.4:26759366-26759385 | MS.gene99188:CDS | 45.0% | |
| TCAAAGGTGGGTGACTAATC+TGG | - | chr8.4:26761016-26761035 | None:intergenic | 45.0% | |
| TGAATCATTGTCCTCCACCA+TGG | + | chr8.4:26761393-26761412 | MS.gene99188:CDS | 45.0% | |
| TGAGCCCATTAGAGAATTCG+TGG | + | chr8.4:26761462-26761481 | MS.gene99188:intron | 45.0% | |
| TGAGGCAATCCGCAAAAGTA+AGG | + | chr8.4:26759213-26759232 | MS.gene99188:CDS | 45.0% | |
| TGAGTATCCGTTGAAGGCAA+TGG | - | chr8.4:26761569-26761588 | None:intergenic | 45.0% | |
| TGCTCAAGAGTTTGGGAGAA+AGG | + | chr8.4:26759963-26759982 | MS.gene99188:intron | 45.0% | |
| TGGGTTGTTCCTGAGAAGAA+AGG | + | chr8.4:26759535-26759554 | MS.gene99188:intron | 45.0% | |
| TGGTCAAACGTTGTTCTCCT+GGG | - | chr8.4:26760970-26760989 | None:intergenic | 45.0% | |
| ! | AAGGCAATGGTGGAGATATG+AGG | - | chr8.4:26759022-26759041 | None:intergenic | 45.0% |
| ! | ACCTTTGATGGGTCGAAAAC+CGG | + | chr8.4:26761028-26761047 | MS.gene99188:intron | 45.0% |
| ! | ATTTTAAGCCACGCTGCTGT+GGG | + | chr8.4:26759673-26759692 | MS.gene99188:intron | 45.0% |
| ! | GATTAGTCACCCACCTTTGA+TGG | + | chr8.4:26761016-26761035 | MS.gene99188:intron | 45.0% |
| ! | GTTTGAAACCCGTCACTGAA+CGG | + | chr8.4:26760115-26760134 | MS.gene99188:intron | 45.0% |
| ! | GTTTTCGACCCATCAAAGGT+GGG | - | chr8.4:26761028-26761047 | None:intergenic | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | - | chr8.4:26761243-26761262 | None:intergenic | 45.0% |
| ! | TTGCCGACTGTGTATAACCT+TGG | + | chr8.4:26761509-26761528 | MS.gene99188:intron | 45.0% |
| !! | CGAATTCTCTAATGGGCTCA+TGG | - | chr8.4:26761462-26761481 | None:intergenic | 45.0% |
| !! | CTTTGGTGGTGTTGAGCAAA+AGG | - | chr8.4:26761698-26761717 | None:intergenic | 45.0% |
| !! | AAAAAAAAACAATTTATTAT+AGG | + | chr8.4:26760881-26760900 | MS.gene99188:intron | 5.0% |
| !! | TTAAAAACAAATAAAATAAA+AGG | - | chr8.4:26760729-26760748 | None:intergenic | 5.0% |
| ACTAGATGATGTGAAGGCGG+AGG | - | chr8.4:26761339-26761358 | None:intergenic | 50.0% | |
| AGACGACGTGCTCAAGAGTT+TGG | + | chr8.4:26759955-26759974 | MS.gene99188:intron | 50.0% | |
| ATGGTAGAGGCTGTTAGTGC+AGG | + | chr8.4:26759727-26759746 | MS.gene99188:intron | 50.0% | |
| ATGTGAAGGCGGAGGAAGAA+TGG | - | chr8.4:26761331-26761350 | None:intergenic | 50.0% | |
| CAAAAGGTGGGGGGCAAAAA+GGG | - | chr8.4:26760223-26760242 | None:intergenic | 50.0% | |
| CAGGGATTCCAATGATCACG+TGG | + | chr8.4:26759746-26759765 | MS.gene99188:intron | 50.0% | |
| CAGTCGGCAATGATGTAGTC+AGG | - | chr8.4:26758965-26758984 | None:intergenic | 50.0% | |
| CTGGTCAAACGTTGTTCTCC+TGG | - | chr8.4:26760971-26760990 | None:intergenic | 50.0% | |
| GAAGAATGCGGTGAAGGCAA+TGG | - | chr8.4:26759035-26759054 | None:intergenic | 50.0% | |
| GACGACGTGCTCAAGAGTTT+GGG | + | chr8.4:26759956-26759975 | MS.gene99188:intron | 50.0% | |
| GAGGAAGAATGGATCGACAG+AGG | - | chr8.4:26761320-26761339 | None:intergenic | 50.0% | |
| GATATCTTGGCCATTGTGGC+AGG | - | chr8.4:26761421-26761440 | None:intergenic | 50.0% | |
| GCAACAGAGTGGTCTGTACA+TGG | + | chr8.4:26759841-26759860 | MS.gene99188:intron | 50.0% | |
| GGACGATGACGATGAAGCTA+AGG | + | chr8.4:26759927-26759946 | MS.gene99188:intron | 50.0% | |
| GGTAACAAGGCTTGGCATCT+TGG | + | chr8.4:26759304-26759323 | MS.gene99188:CDS | 50.0% | |
| GTATCCGTTGAAGGCAATGG+TGG | - | chr8.4:26761566-26761585 | None:intergenic | 50.0% | |
| TGCACTAACAGCCTCTACCA+TGG | - | chr8.4:26759728-26759747 | None:intergenic | 50.0% | |
| TGCAGCACATACTCTTACGG+TGG | - | chr8.4:26760462-26760481 | None:intergenic | 50.0% | |
| TGGTAGAGGCTGTTAGTGCA+GGG | + | chr8.4:26759728-26759747 | MS.gene99188:intron | 50.0% | |
| ! | CTAATCTGGCTCATGCGTAG+AGG | - | chr8.4:26761002-26761021 | None:intergenic | 50.0% |
| ! | GATTTTAAGCCACGCTGCTG+TGG | + | chr8.4:26759672-26759691 | MS.gene99188:intron | 50.0% |
| ! | GGTTTTCGACCCATCAAAGG+TGG | - | chr8.4:26761029-26761048 | None:intergenic | 50.0% |
| ! | TTGCCGACTGTGTATACCCT+TGG | + | chr8.4:26758975-26758994 | MS.gene99188:CDS | 50.0% |
| !! | AAAGGTCGACTTGCTGAGAG+GGG | - | chr8.4:26761363-26761382 | None:intergenic | 50.0% |
| !! | ACCGGTTTTCGACCCATCAA+AGG | - | chr8.4:26761032-26761051 | None:intergenic | 50.0% |
| !! | ATGCCAAGCCTTGTTACCCA+TGG | - | chr8.4:26759302-26759321 | None:intergenic | 50.0% |
| !! | GAAAGGTCGACTTGCTGAGA+GGG | - | chr8.4:26761364-26761383 | None:intergenic | 50.0% |
| !!! | CTCTTTTTTTGGTGGTGGCC+GGG | + | chr8.4:26761180-26761199 | MS.gene99188:intron | 50.0% |
| !!! | GCTCTTTTTTTGGTGGTGGC+CGG | + | chr8.4:26761179-26761198 | MS.gene99188:intron | 50.0% |
| !!! | TCTTTTTTTGGTGGTGGCCG+GGG | + | chr8.4:26761181-26761200 | MS.gene99188:intron | 50.0% |
| ACATTGCGGGTCGAACTCCA+TGG | + | chr8.4:26759708-26759727 | MS.gene99188:intron | 55.0% | |
| ATGATCACGTGGCCTGTGCA+AGG | + | chr8.4:26759757-26759776 | MS.gene99188:intron | 55.0% | |
| CAGCAAGTCGACCTTTCCGA+AGG | + | chr8.4:26761367-26761386 | MS.gene99188:intron | 55.0% | |
| CAGTCGGCAATGATGTCGTC+AGG | - | chr8.4:26761499-26761518 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | + | chr8.4:26761245-26761264 | MS.gene99188:intron | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | - | chr8.4:26761248-26761267 | None:intergenic | 55.0% | |
| GAATGCGGTGAAGGCAATGG+TGG | - | chr8.4:26759032-26759051 | None:intergenic | 55.0% | |
| GCAAAAGGTGGGGGGCAAAA+AGG | - | chr8.4:26760224-26760243 | None:intergenic | 55.0% | |
| GCGCGCATGAGTGTCTAAGT+TGG | + | chr8.4:26759392-26759411 | MS.gene99188:intron | 55.0% | |
| TGCACAGGCCACGTGATCAT+TGG | - | chr8.4:26759757-26759776 | None:intergenic | 55.0% | |
| TGTTGTGCGAAGGATTGGGG+TGG | + | chr8.4:26759810-26759829 | MS.gene99188:intron | 55.0% | |
| ! | AAGGTCTGGGGTTCAATCCC+CGG | - | chr8.4:26761201-26761220 | None:intergenic | 55.0% |
| ! | ATGCGTAGAGGCATGCACAC+TGG | - | chr8.4:26760990-26761009 | None:intergenic | 55.0% |
| !! | GGAAAGGTCGACTTGCTGAG+AGG | - | chr8.4:26761365-26761384 | None:intergenic | 55.0% |
| CACCATGGACCCTGCCACAA+TGG | + | chr8.4:26761408-26761427 | MS.gene99188:CDS | 60.0% | |
| CATTGTGGCAGGGTCCATGG+TGG | - | chr8.4:26761410-26761429 | None:intergenic | 60.0% | |
| CGAAGGATTGGGGTGGAGGT+GGG | + | chr8.4:26759817-26759836 | MS.gene99188:intron | 60.0% | |
| CGGGTCGAACTCCATGGTAG+AGG | + | chr8.4:26759714-26759733 | MS.gene99188:intron | 60.0% | |
| TGAATGCACCCACAGCAGCG+TGG | - | chr8.4:26759684-26759703 | None:intergenic | 60.0% | |
| TGGAGGTGGGTGCAACAGAG+TGG | + | chr8.4:26759830-26759849 | MS.gene99188:intron | 60.0% | |
| TGTGCGAAGGATTGGGGTGG+AGG | + | chr8.4:26759813-26759832 | MS.gene99188:intron | 60.0% | |
| GCGAAGGATTGGGGTGGAGG+TGG | + | chr8.4:26759816-26759835 | MS.gene99188:intron | 65.0% | |
| GGCCATTGTGGCAGGGTCCA+TGG | - | chr8.4:26761413-26761432 | None:intergenic | 65.0% | |
| TGTGGCAGGGTCCATGGTGG+AGG | - | chr8.4:26761407-26761426 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 26758893 | 26761763 | 26758893 | ID=MS.gene99188 |
| chr8.4 | mRNA | 26758893 | 26761763 | 26758893 | ID=MS.gene99188.t1;Parent=MS.gene99188 |
| chr8.4 | exon | 26758893 | 26759387 | 26758893 | ID=MS.gene99188.t1.exon1;Parent=MS.gene99188.t1 |
| chr8.4 | CDS | 26758893 | 26759387 | 26758893 | ID=cds.MS.gene99188.t1;Parent=MS.gene99188.t1 |
| chr8.4 | exon | 26761370 | 26761445 | 26761370 | ID=MS.gene99188.t1.exon2;Parent=MS.gene99188.t1 |
| chr8.4 | CDS | 26761370 | 26761445 | 26761370 | ID=cds.MS.gene99188.t1;Parent=MS.gene99188.t1 |
| chr8.4 | exon | 26761611 | 26761763 | 26761611 | ID=MS.gene99188.t1.exon3;Parent=MS.gene99188.t1 |
| chr8.4 | CDS | 26761611 | 26761763 | 26761611 | ID=cds.MS.gene99188.t1;Parent=MS.gene99188.t1 |
| Gene Sequence |
| Protein sequence |
