Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051517.t1 | XP_003588798.2 | 97.1 | 1011 | 28 | 1 | 1 | 1010 | 1 | 1011 | 0.00E+00 | 1813.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051517.t1 | Q3S4A7 | 55.9 | 1030 | 325 | 15 | 1 | 1010 | 1 | 921 | 3.7e-289 | 995.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051517.t1 | G7I7J7 | 97.1 | 1011 | 28 | 1 | 1 | 1010 | 1 | 1011 | 0.0e+00 | 1813.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene051517.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051517 | MS.gene051651 | 0.805662 | 1.20E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene05470 | -0.801127 | 1.04E-48 | -1.69E-46 |
| MS.gene051517 | MS.gene056856 | 0.803234 | 3.84E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene058452 | 0.870916 | 1.02E-66 | -1.69E-46 |
| MS.gene051517 | MS.gene060405 | 0.812466 | 4.18E-51 | -1.69E-46 |
| MS.gene051517 | MS.gene06084 | 0.80591 | 1.06E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene061683 | 0.814147 | 1.79E-51 | -1.69E-46 |
| MS.gene051517 | MS.gene061777 | 0.817849 | 2.66E-52 | -1.69E-46 |
| MS.gene051517 | MS.gene063148 | 0.844825 | 5.95E-59 | -1.69E-46 |
| MS.gene051517 | MS.gene065424 | 0.812575 | 3.96E-51 | -1.69E-46 |
| MS.gene051517 | MS.gene066309 | 0.812134 | 4.94E-51 | -1.69E-46 |
| MS.gene051517 | MS.gene068585 | 0.850486 | 1.65E-60 | -1.69E-46 |
| MS.gene051517 | MS.gene069120 | 0.816802 | 4.58E-52 | -1.69E-46 |
| MS.gene051517 | MS.gene070268 | 0.819064 | 1.41E-52 | -1.69E-46 |
| MS.gene051517 | MS.gene071307 | -0.801644 | 8.17E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene072664 | 0.810174 | 1.31E-50 | -1.69E-46 |
| MS.gene051517 | MS.gene073297 | 0.813329 | 2.70E-51 | -1.69E-46 |
| MS.gene051517 | MS.gene08402 | 0.800509 | 1.39E-48 | -1.69E-46 |
| MS.gene051517 | MS.gene08407 | 0.81842 | 1.98E-52 | -1.69E-46 |
| MS.gene051517 | MS.gene08658 | 0.800722 | 1.26E-48 | -1.69E-46 |
| MS.gene051517 | MS.gene21274 | 0.829245 | 5.73E-55 | -1.69E-46 |
| MS.gene051517 | MS.gene22400 | 0.804065 | 2.58E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene22939 | 0.816175 | 6.33E-52 | -1.69E-46 |
| MS.gene051517 | MS.gene24522 | 0.801609 | 8.31E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene25516 | 0.814577 | 1.44E-51 | -1.69E-46 |
| MS.gene051517 | MS.gene26474 | 0.816917 | 4.32E-52 | -1.69E-46 |
| MS.gene051517 | MS.gene26475 | 0.821411 | 4.10E-53 | -1.69E-46 |
| MS.gene051517 | MS.gene27643 | 0.803262 | 3.79E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene27790 | 0.802657 | 5.06E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene28077 | 0.815633 | 8.37E-52 | -1.69E-46 |
| MS.gene051517 | MS.gene29925 | -0.804049 | 2.60E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene29927 | -0.812686 | 3.74E-51 | -1.69E-46 |
| MS.gene051517 | MS.gene33084 | 0.920548 | 1.11E-87 | -1.69E-46 |
| MS.gene051517 | MS.gene35208 | 0.816304 | 5.93E-52 | -1.69E-46 |
| MS.gene051517 | MS.gene35794 | 0.804525 | 2.07E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene35795 | 0.831834 | 1.33E-55 | -1.69E-46 |
| MS.gene051517 | MS.gene35853 | 0.809454 | 1.88E-50 | -1.69E-46 |
| MS.gene051517 | MS.gene35931 | 0.826831 | 2.19E-54 | -1.69E-46 |
| MS.gene051517 | MS.gene36841 | 0.811303 | 7.49E-51 | -1.69E-46 |
| MS.gene051517 | MS.gene37399 | 0.80753 | 4.83E-50 | -1.69E-46 |
| MS.gene051517 | MS.gene38250 | -0.800824 | 1.20E-48 | -1.69E-46 |
| MS.gene051517 | MS.gene38577 | 0.801855 | 7.40E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene38615 | 0.814305 | 1.65E-51 | -1.69E-46 |
| MS.gene051517 | MS.gene41367 | 0.8101 | 1.36E-50 | -1.69E-46 |
| MS.gene051517 | MS.gene44249 | 0.806323 | 8.70E-50 | -1.69E-46 |
| MS.gene051517 | MS.gene47437 | 0.805897 | 1.07E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene47882 | 0.801274 | 9.73E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene47883 | 0.803369 | 3.60E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene49425 | 0.802772 | 4.79E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene54709 | -0.806642 | 7.45E-50 | -1.69E-46 |
| MS.gene051517 | MS.gene55079 | 0.80585 | 1.09E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene55899 | 0.806784 | 6.95E-50 | -1.69E-46 |
| MS.gene051517 | MS.gene56765 | 0.815532 | 8.81E-52 | -1.69E-46 |
| MS.gene051517 | MS.gene57291 | 0.815678 | 8.17E-52 | -1.69E-46 |
| MS.gene051517 | MS.gene60712 | -0.808886 | 2.48E-50 | -1.69E-46 |
| MS.gene051517 | MS.gene61244 | 0.807419 | 5.10E-50 | -1.69E-46 |
| MS.gene051517 | MS.gene68203 | 0.829184 | 5.93E-55 | -1.69E-46 |
| MS.gene051517 | MS.gene68635 | 0.800167 | 1.64E-48 | -1.69E-46 |
| MS.gene051517 | MS.gene68946 | 0.806146 | 9.48E-50 | -1.69E-46 |
| MS.gene051517 | MS.gene69635 | 0.81561 | 8.47E-52 | -1.69E-46 |
| MS.gene051517 | MS.gene71379 | 0.807943 | 3.95E-50 | -1.69E-46 |
| MS.gene051517 | MS.gene72923 | 0.802137 | 6.47E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene73788 | 0.801288 | 9.66E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene75365 | 0.819476 | 1.14E-52 | -1.69E-46 |
| MS.gene051517 | MS.gene76536 | 0.800915 | 1.15E-48 | -1.69E-46 |
| MS.gene051517 | MS.gene76856 | 0.821143 | 4.72E-53 | -1.69E-46 |
| MS.gene051517 | MS.gene78250 | 0.851324 | 9.56E-61 | -1.69E-46 |
| MS.gene051517 | MS.gene79856 | 0.802695 | 4.97E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene81725 | 0.804136 | 2.50E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene81981 | 0.804464 | 2.13E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene82356 | -0.801266 | 9.76E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene83291 | 0.800032 | 1.74E-48 | -1.69E-46 |
| MS.gene051517 | MS.gene83364 | 0.809225 | 2.10E-50 | -1.69E-46 |
| MS.gene051517 | MS.gene84157 | 0.801607 | 8.32E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene85152 | 0.810985 | 8.78E-51 | -1.69E-46 |
| MS.gene051517 | MS.gene88896 | -0.805274 | 1.45E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene91317 | 0.81463 | 1.40E-51 | -1.69E-46 |
| MS.gene051517 | MS.gene93105 | 0.804945 | 1.69E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene95132 | 0.817928 | 2.56E-52 | -1.69E-46 |
| MS.gene051517 | MS.gene96299 | 0.807726 | 4.39E-50 | -1.69E-46 |
| MS.gene051517 | MS.gene96335 | 0.811839 | 5.73E-51 | -1.69E-46 |
| MS.gene051517 | MS.gene97258 | 0.82206 | 2.90E-53 | -1.69E-46 |
| MS.gene051517 | MS.gene97259 | 0.821473 | 3.96E-53 | -1.69E-46 |
| MS.gene051517 | MS.gene98480 | 0.81858 | 1.82E-52 | -1.69E-46 |
| MS.gene051517 | MS.gene99188 | 0.812877 | 3.40E-51 | -1.69E-46 |
| MS.gene051517 | MS.gene99603 | 0.821268 | 4.42E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051517.t1 | MTR_1g013360 | 98.516 | 1011 | 14 | 1 | 1 | 1010 | 1 | 1011 | 0.0 | 2071 |
| MS.gene051517.t1 | MTR_3g105590 | 69.185 | 1019 | 232 | 15 | 5 | 1011 | 1 | 949 | 0.0 | 1354 |
| MS.gene051517.t1 | MTR_1g014670 | 82.707 | 399 | 58 | 3 | 43 | 441 | 2 | 389 | 0.0 | 655 |
| MS.gene051517.t1 | MTR_3g085130 | 35.220 | 318 | 171 | 7 | 379 | 695 | 240 | 523 | 1.60e-41 | 165 |
| MS.gene051517.t1 | MTR_3g085130 | 32.639 | 144 | 77 | 3 | 869 | 1011 | 698 | 822 | 2.32e-13 | 75.1 |
| MS.gene051517.t1 | MTR_3g085130 | 35.220 | 318 | 171 | 7 | 379 | 695 | 450 | 733 | 8.65e-41 | 163 |
| MS.gene051517.t1 | MTR_3g085130 | 32.639 | 144 | 77 | 3 | 869 | 1011 | 908 | 1032 | 7.04e-13 | 73.6 |
| MS.gene051517.t1 | MTR_8g106150 | 34.921 | 315 | 178 | 9 | 379 | 686 | 143 | 437 | 1.38e-38 | 155 |
| MS.gene051517.t1 | MTR_8g106150 | 32.934 | 167 | 96 | 4 | 846 | 1011 | 601 | 752 | 1.98e-16 | 84.7 |
| MS.gene051517.t1 | MTR_8g106150 | 34.603 | 315 | 179 | 8 | 379 | 686 | 386 | 680 | 4.19e-38 | 155 |
| MS.gene051517.t1 | MTR_8g106150 | 32.934 | 167 | 96 | 4 | 846 | 1011 | 844 | 995 | 2.48e-16 | 84.7 |
| MS.gene051517.t1 | MTR_8g080770 | 33.993 | 303 | 163 | 6 | 379 | 680 | 395 | 661 | 1.52e-37 | 153 |
| MS.gene051517.t1 | MTR_8g080770 | 33.993 | 303 | 163 | 6 | 379 | 680 | 286 | 552 | 1.92e-37 | 152 |
| MS.gene051517.t1 | MTR_5g097410 | 32.237 | 304 | 173 | 6 | 379 | 680 | 620 | 892 | 1.16e-34 | 144 |
| MS.gene051517.t1 | MTR_5g097410 | 31.429 | 140 | 89 | 2 | 858 | 996 | 1065 | 1198 | 2.80e-12 | 71.6 |
| MS.gene051517.t1 | MTR_4g031150 | 38.095 | 147 | 88 | 2 | 380 | 524 | 397 | 542 | 5.01e-24 | 109 |
| MS.gene051517.t1 | MTR_8g075340 | 28.667 | 300 | 165 | 7 | 379 | 676 | 474 | 726 | 8.41e-24 | 109 |
| MS.gene051517.t1 | MTR_8g075340 | 28.346 | 254 | 124 | 8 | 773 | 1004 | 942 | 1159 | 2.64e-11 | 68.6 |
| MS.gene051517.t1 | MTR_5g022470 | 29.085 | 306 | 168 | 6 | 379 | 682 | 512 | 770 | 1.05e-23 | 108 |
| MS.gene051517.t1 | MTR_5g022470 | 29.085 | 306 | 168 | 6 | 379 | 682 | 512 | 770 | 1.32e-23 | 108 |
| MS.gene051517.t1 | MTR_5g022470 | 29.592 | 196 | 82 | 4 | 832 | 999 | 1018 | 1185 | 8.78e-11 | 66.6 |
| MS.gene051517.t1 | MTR_7g109150 | 26.608 | 342 | 174 | 10 | 380 | 717 | 348 | 616 | 1.89e-22 | 103 |
| MS.gene051517.t1 | MTR_1g087140 | 27.273 | 330 | 174 | 12 | 381 | 692 | 394 | 675 | 1.16e-16 | 85.9 |
| MS.gene051517.t1 | MTR_1g090850 | 25.956 | 366 | 204 | 12 | 328 | 680 | 337 | 648 | 9.28e-16 | 82.8 |
| MS.gene051517.t1 | MTR_1g079790 | 25.641 | 195 | 131 | 4 | 337 | 521 | 327 | 517 | 2.83e-11 | 67.8 |
| MS.gene051517.t1 | MTR_1g079790 | 25.641 | 195 | 131 | 4 | 337 | 521 | 327 | 517 | 4.85e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051517.t1 | AT5G10720 | 56.195 | 1025 | 330 | 19 | 1 | 1010 | 1 | 921 | 0.0 | 1058 |
| MS.gene051517.t1 | AT5G10680 | 50.581 | 172 | 72 | 4 | 5 | 174 | 1 | 161 | 8.18e-41 | 150 |
| MS.gene051517.t1 | AT5G10680 | 50.581 | 172 | 72 | 4 | 5 | 174 | 1 | 161 | 8.18e-41 | 150 |
| MS.gene051517.t1 | AT2G01830 | 33.333 | 309 | 170 | 6 | 379 | 680 | 464 | 743 | 2.05e-37 | 152 |
| MS.gene051517.t1 | AT2G01830 | 32.558 | 129 | 68 | 3 | 869 | 996 | 936 | 1046 | 2.82e-11 | 68.6 |
| MS.gene051517.t1 | AT2G01830 | 33.333 | 309 | 170 | 6 | 379 | 680 | 475 | 754 | 2.13e-37 | 152 |
| MS.gene051517.t1 | AT2G01830 | 32.558 | 129 | 68 | 3 | 869 | 996 | 947 | 1057 | 3.03e-11 | 68.2 |
| MS.gene051517.t1 | AT2G01830 | 33.333 | 309 | 170 | 6 | 379 | 680 | 452 | 731 | 2.19e-37 | 152 |
| MS.gene051517.t1 | AT2G01830 | 32.558 | 129 | 68 | 3 | 869 | 996 | 924 | 1034 | 2.69e-11 | 68.6 |
| MS.gene051517.t1 | AT2G01830 | 33.333 | 309 | 170 | 6 | 379 | 680 | 452 | 731 | 2.19e-37 | 152 |
| MS.gene051517.t1 | AT2G01830 | 32.558 | 129 | 68 | 3 | 869 | 996 | 924 | 1034 | 2.69e-11 | 68.6 |
| MS.gene051517.t1 | AT2G01830 | 33.333 | 309 | 170 | 6 | 379 | 680 | 452 | 731 | 2.19e-37 | 152 |
| MS.gene051517.t1 | AT2G01830 | 32.558 | 129 | 68 | 3 | 869 | 996 | 924 | 1034 | 2.69e-11 | 68.6 |
| MS.gene051517.t1 | AT2G01830 | 33.333 | 309 | 170 | 6 | 379 | 680 | 452 | 731 | 2.19e-37 | 152 |
| MS.gene051517.t1 | AT2G01830 | 32.558 | 129 | 68 | 3 | 869 | 996 | 924 | 1034 | 2.69e-11 | 68.6 |
| MS.gene051517.t1 | AT1G27320 | 33.993 | 303 | 161 | 6 | 379 | 680 | 453 | 717 | 9.31e-37 | 150 |
| MS.gene051517.t1 | AT1G27320 | 33.083 | 133 | 82 | 3 | 865 | 996 | 888 | 1014 | 5.86e-13 | 73.9 |
| MS.gene051517.t1 | AT5G35750 | 33.550 | 307 | 164 | 6 | 379 | 680 | 590 | 861 | 8.27e-34 | 141 |
| MS.gene051517.t1 | AT5G35750 | 33.333 | 129 | 79 | 3 | 869 | 996 | 1037 | 1159 | 3.04e-12 | 71.6 |
| MS.gene051517.t1 | AT2G17820 | 25.505 | 396 | 224 | 13 | 309 | 697 | 443 | 774 | 4.45e-25 | 113 |
| MS.gene051517.t1 | AT1G66340 | 37.584 | 149 | 91 | 2 | 372 | 518 | 338 | 486 | 8.40e-23 | 105 |
| MS.gene051517.t1 | AT2G47430 | 27.536 | 345 | 194 | 11 | 347 | 680 | 366 | 665 | 2.45e-19 | 94.7 |
| MS.gene051517.t1 | AT2G40940 | 29.545 | 220 | 121 | 6 | 338 | 524 | 282 | 500 | 1.65e-16 | 84.7 |
Find 175 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAATGCACCTGTTGTTAT+TGG | 0.158249 | 1.3:+7613628 | MS.gene051517:CDS |
| AACTTTCATGCTTAGTTTCT+AGG | 0.195705 | 1.3:-7617117 | None:intergenic |
| GAGATAAGATCGCCGCTTTC+TGG | 0.215511 | 1.3:+7614986 | MS.gene051517:CDS |
| TTGGTGAGATTCTTCTTCTT+TGG | 0.219070 | 1.3:-7615979 | None:intergenic |
| CAAACGTCCGGTTTCGATAT+TGG | 0.225048 | 1.3:+7613321 | MS.gene051517:CDS |
| GGAAGTTGAGCAAAGAAAAT+TGG | 0.237386 | 1.3:+7613246 | MS.gene051517:CDS |
| TTGATCACATCTCATACTTC+TGG | 0.237521 | 1.3:-7616069 | None:intergenic |
| TTTGGAACAGGTTGAATTAA+TGG | 0.245842 | 1.3:+7616721 | MS.gene051517:intron |
| ACTGGTCTTCTGTGACCTTT+TGG | 0.259087 | 1.3:-7615998 | None:intergenic |
| TAAAGAGCAAAGACAGCTTT+TGG | 0.270075 | 1.3:+7615051 | MS.gene051517:CDS |
| CTTACAAATTATACAGATAA+AGG | 0.272256 | 1.3:+7613121 | MS.gene051517:CDS |
| CATGTTATCTTCAGGAGATT+TGG | 0.286514 | 1.3:+7615078 | MS.gene051517:CDS |
| AACATATCTTGGTCTCTTCC+TGG | 0.287184 | 1.3:-7613040 | None:intergenic |
| AATAAAACCATTCACATTAC+AGG | 0.292769 | 1.3:+7614816 | MS.gene051517:CDS |
| CCAATTCCAACCACGAACTT+TGG | 0.307599 | 1.3:+7616898 | MS.gene051517:CDS |
| TCTTTGGCAAATGCTGGTTC+TGG | 0.312428 | 1.3:-7615963 | None:intergenic |
| CATTGTTAAACACATGATTC+TGG | 0.316290 | 1.3:-7616130 | None:intergenic |
| GCAGACCATGCTCGAAAATA+TGG | 0.317830 | 1.3:+7616451 | MS.gene051517:CDS |
| AACAATTGGAGTAAACTATA+TGG | 0.319084 | 1.3:+7614611 | MS.gene051517:CDS |
| CAATTCCAACCACGAACTTT+GGG | 0.320655 | 1.3:+7616899 | MS.gene051517:CDS |
| AGTATGATACTGTTGTTTAC+TGG | 0.324129 | 1.3:+7613434 | MS.gene051517:CDS |
| GTTTGAAGACCATTCATAAC+TGG | 0.338515 | 1.3:-7617622 | None:intergenic |
| ACATCAGTTCCAACATCTTC+TGG | 0.341534 | 1.3:-7612992 | None:intergenic |
| ACAAAACCATGATAATAATA+AGG | 0.343332 | 1.3:+7617156 | MS.gene051517:CDS |
| TCGGAGAGAGGATATATTAA+AGG | 0.347750 | 1.3:+7613501 | MS.gene051517:CDS |
| CTATACCTACTTTATTTAGA+AGG | 0.350625 | 1.3:+7616413 | MS.gene051517:CDS |
| ATTCGGCTTTAACGTCGATT+TGG | 0.353565 | 1.3:-7617338 | None:intergenic |
| TCTTCAACAAGAAGAATATT+CGG | 0.358321 | 1.3:-7617355 | None:intergenic |
| TTACTTCTTCCAACATATCT+TGG | 0.359994 | 1.3:-7613051 | None:intergenic |
| GGCTTATTTAATGCAACATT+GGG | 0.361294 | 1.3:+7613156 | MS.gene051517:CDS |
| GCAATGGTGCTGCAGCTGTC+TGG | 0.366539 | 1.3:-7615577 | None:intergenic |
| CCAAAGTTCGTGGTTGGAAT+TGG | 0.374939 | 1.3:-7616898 | None:intergenic |
| AGCATGGATGTCGTGAATAA+TGG | 0.377420 | 1.3:+7617430 | MS.gene051517:CDS |
| TTGGATGTCATGTTATCTTC+AGG | 0.380119 | 1.3:+7615070 | MS.gene051517:CDS |
| CATGCACCTTATTATTATCA+TGG | 0.383722 | 1.3:-7617162 | None:intergenic |
| CTAGAGTTTGCACTACCATT+TGG | 0.384833 | 1.3:-7617193 | None:intergenic |
| TTCGAGGAAGAGATTAGTTA+TGG | 0.399361 | 1.3:+7613292 | MS.gene051517:CDS |
| ATTACCTCTTCTTGTAAACT+TGG | 0.403224 | 1.3:-7614270 | None:intergenic |
| AACAGTTGGAGGCGAGTATT+CGG | 0.405955 | 1.3:+7613482 | MS.gene051517:CDS |
| AATTGGAAGCTACAAAATTC+AGG | 0.406669 | 1.3:+7615528 | MS.gene051517:CDS |
| TGATCACATCTCATACTTCT+GGG | 0.407144 | 1.3:-7616068 | None:intergenic |
| TGATGATCCAGATGATCTTT+CGG | 0.409319 | 1.3:+7616835 | MS.gene051517:CDS |
| ACCTGTTGTTATTGGCCATC+AGG | 0.410974 | 1.3:+7613636 | MS.gene051517:CDS |
| AAGAGAGAAGTAATGGAGAA+AGG | 0.411442 | 1.3:+7614492 | MS.gene051517:CDS |
| TCTTCTTCTTTGGCAAATGC+TGG | 0.415639 | 1.3:-7615969 | None:intergenic |
| CAGTCAACTATTTCAGCAAA+TGG | 0.416796 | 1.3:+7616017 | MS.gene051517:CDS |
| TCAAGTAACATCATTTCAAA+TGG | 0.417988 | 1.3:+7617013 | MS.gene051517:CDS |
| ATGTATAGGAGCTATGAAAT+TGG | 0.423052 | 1.3:+7615511 | MS.gene051517:intron |
| GAAGTGTTACATACCTCAAT+AGG | 0.423152 | 1.3:-7615641 | None:intergenic |
| CTTATGAGGAAACAGGCAAT+TGG | 0.427919 | 1.3:+7617662 | MS.gene051517:CDS |
| TTGGAACAGGTTGAATTAAT+GGG | 0.430242 | 1.3:+7616722 | MS.gene051517:intron |
| GATCTTTCCAAGGTTGAGTC+AGG | 0.431218 | 1.3:+7615127 | MS.gene051517:CDS |
| CACATTCATACTACCATACA+AGG | 0.433058 | 1.3:+7616790 | MS.gene051517:CDS |
| AAATATGGAGGCACAGGTCT+AGG | 0.436640 | 1.3:+7616466 | MS.gene051517:CDS |
| TCGAGGAAGAGATTAGTTAT+GGG | 0.438884 | 1.3:+7613293 | MS.gene051517:CDS |
| AAGATCTACCGGCGGCGATA+AGG | 0.439631 | 1.3:+7613365 | MS.gene051517:CDS |
| TCAAAATAATGTCGTATGAA+TGG | 0.440366 | 1.3:-7617480 | None:intergenic |
| TTCAAACAACAAAACTGATT+AGG | 0.443792 | 1.3:+7617638 | MS.gene051517:CDS |
| AGATAAAGGGTCATCTCAAT+TGG | 0.444089 | 1.3:+7613135 | MS.gene051517:CDS |
| CAAGCTGTTGAAACCTTGTA+TGG | 0.450617 | 1.3:-7616803 | None:intergenic |
| TGGGATGCTGCAAGAGAAGC+TGG | 0.451002 | 1.3:+7617682 | MS.gene051517:CDS |
| ATGTAAATATTGCAGGTCAC+TGG | 0.451028 | 1.3:+7615719 | MS.gene051517:intron |
| ATAAGCAGGCTAACGCGGTT+CGG | 0.451460 | 1.3:+7613182 | MS.gene051517:CDS |
| ATTAGGTCTTATGAGGAAAC+AGG | 0.451767 | 1.3:+7617655 | MS.gene051517:CDS |
| CGAGGAAGAGATTAGTTATG+GGG | 0.452682 | 1.3:+7613294 | MS.gene051517:CDS |
| TGGCTTATTTAATGCAACAT+TGG | 0.452961 | 1.3:+7613155 | MS.gene051517:CDS |
| AAATGGAACAAATTCAATTG+AGG | 0.453149 | 1.3:+7617030 | MS.gene051517:CDS |
| ACTAGCAATATGTAAACAAC+TGG | 0.455705 | 1.3:+7616489 | MS.gene051517:CDS |
| TTGAAATGATGTTACTTGAA+TGG | 0.456614 | 1.3:-7617009 | None:intergenic |
| AGTGTCTTGAAAAGTATCTA+AGG | 0.457868 | 1.3:+7618090 | MS.gene051517:CDS |
| AGATTCCTTCACACCTGCTC+CGG | 0.458251 | 1.3:-7614460 | None:intergenic |
| CTGGTTCTGGAACAACATAA+AGG | 0.460292 | 1.3:-7615950 | None:intergenic |
| TCGACATCCGAAAGATCATC+TGG | 0.460612 | 1.3:-7616842 | None:intergenic |
| CAGAAAATGTTAACATTGGA+AGG | 0.461173 | 1.3:+7615599 | MS.gene051517:CDS |
| ACAATTGGAGTAAACTATAT+GGG | 0.461326 | 1.3:+7614612 | MS.gene051517:CDS |
| AGCAAGGCAGGTGAAACAAT+TGG | 0.462061 | 1.3:+7614597 | MS.gene051517:CDS |
| GATTAAACCTGTAATGTGAA+TGG | 0.463646 | 1.3:-7614823 | None:intergenic |
| ACATGTCTTACTACCTCTCT+TGG | 0.471587 | 1.3:-7615551 | None:intergenic |
| CTCTACTTGCTTCATTACAT+TGG | 0.472879 | 1.3:-7617216 | None:intergenic |
| AAAACTGATTAGGTCTTATG+AGG | 0.480570 | 1.3:+7617648 | MS.gene051517:CDS |
| CTATACATGGCAAGATCTAC+CGG | 0.482979 | 1.3:+7613354 | MS.gene051517:CDS |
| TGAACCACAACAAACATGTC+AGG | 0.483397 | 1.3:+7617264 | MS.gene051517:CDS |
| GTTTACATGCCAGTTATGAA+TGG | 0.483418 | 1.3:+7617613 | MS.gene051517:CDS |
| AAGCATGAAAGTTTATGTAA+TGG | 0.484176 | 1.3:+7617127 | MS.gene051517:CDS |
| AGAATGTTTCGCCAACGGTA+TGG | 0.484664 | 1.3:+7618025 | MS.gene051517:CDS |
| ACCTGATGGCCAATAACAAC+AGG | 0.484985 | 1.3:-7613637 | None:intergenic |
| AGATTCTCACAAATTTAGTC+AGG | 0.486787 | 1.3:+7615762 | MS.gene051517:CDS |
| TTACAAATTATACAGATAAA+GGG | 0.487288 | 1.3:+7613122 | MS.gene051517:CDS |
| CTTTGAAAATCAGCTATAGC+TGG | 0.489541 | 1.3:-7613088 | None:intergenic |
| GGGAATGGAAATAACAGATC+AGG | 0.491945 | 1.3:+7614632 | MS.gene051517:CDS |
| AGAATCTCACACAAGTTCAA+TGG | 0.492632 | 1.3:+7616959 | MS.gene051517:CDS |
| AAACAAGAGAATTGAAATTG+AGG | 0.492797 | 1.3:+7613408 | MS.gene051517:CDS |
| GCTTTCTGGTGTTGTTAGCA+TGG | 0.494931 | 1.3:+7615000 | MS.gene051517:CDS |
| TATTTCAGCAAATGGATTGA+AGG | 0.494958 | 1.3:+7616025 | MS.gene051517:CDS |
| GAACCTGTGTTTAGCAAGGC+AGG | 0.495935 | 1.3:+7614585 | MS.gene051517:CDS |
| GATGTGTACGACACTGGAAT+TGG | 0.499123 | 1.3:+7616245 | MS.gene051517:CDS |
| GAGAAAGAATGGCAAAGCTA+AGG | 0.499190 | 1.3:+7614754 | MS.gene051517:CDS |
| TTATGAGGAAACAGGCAATT+GGG | 0.499485 | 1.3:+7617663 | MS.gene051517:CDS |
| TTTCTAACCTGACTCAACCT+TGG | 0.509156 | 1.3:-7615134 | None:intergenic |
| GCATCGTCCAATATCGAAAC+CGG | 0.516844 | 1.3:-7613328 | None:intergenic |
| AGATAACAAGATTAATATCA+TGG | 0.517181 | 1.3:+7617375 | MS.gene051517:CDS |
| GTTTGAAATGGTTTGTGAGA+TGG | 0.519841 | 1.3:+7612916 | None:intergenic |
| GTGTGAGATTCTATGAGGCC+TGG | 0.520618 | 1.3:-7616948 | None:intergenic |
| TAAAGAGAATAATCGATTCG+AGG | 0.522514 | 1.3:+7613276 | MS.gene051517:CDS |
| AGGAAGAGACCAAGATATGT+TGG | 0.524319 | 1.3:+7613042 | MS.gene051517:CDS |
| ATTGCAGAAAATGTTAACAT+TGG | 0.525478 | 1.3:+7615595 | MS.gene051517:CDS |
| GAAGATGTTGGAACTGATGT+TGG | 0.527223 | 1.3:+7612995 | MS.gene051517:CDS |
| AGAAGAAGAATCTCACCAAA+AGG | 0.528810 | 1.3:+7615983 | MS.gene051517:CDS |
| ATGGCTCTGAACTGCGCGTA+TGG | 0.532419 | 1.3:-7617461 | None:intergenic |
| AATGAGAGCAAAACAAATGT+TGG | 0.532993 | 1.3:+7614949 | MS.gene051517:CDS |
| TTTACACATCAAGGCAAAGT+TGG | 0.534123 | 1.3:+7615921 | MS.gene051517:CDS |
| GCTCGAAAATATGGAGGCAC+AGG | 0.535185 | 1.3:+7616460 | MS.gene051517:CDS |
| CATTTGCTGAAATAGTTGAC+TGG | 0.538486 | 1.3:-7616016 | None:intergenic |
| ATCTGTGACAGTTCCTCCAC+AGG | 0.539752 | 1.3:-7613568 | None:intergenic |
| GCTGTCAAGTTTACACATCA+AGG | 0.539918 | 1.3:+7615912 | MS.gene051517:CDS |
| TTAAACACATGATTCTGGAT+AGG | 0.541070 | 1.3:-7616125 | None:intergenic |
| TGATATACTTGATCTTTCCA+AGG | 0.542061 | 1.3:+7615117 | MS.gene051517:CDS |
| AGCCGATGATATACCTATTG+AGG | 0.543862 | 1.3:+7615628 | MS.gene051517:CDS |
| AAAAGCGAGCCCAAAGTTCG+TGG | 0.544177 | 1.3:-7616908 | None:intergenic |
| TTTGAGTAAGAATCGTTGTC+CGG | 0.544394 | 1.3:-7616986 | None:intergenic |
| TGGACGATGCTTACTATACA+TGG | 0.547039 | 1.3:+7613341 | MS.gene051517:CDS |
| AACAAACATGTCAGGGTCAA+GGG | 0.550696 | 1.3:+7617272 | MS.gene051517:CDS |
| GCGAGCCCAAAGTTCGTGGT+TGG | 0.551447 | 1.3:-7616904 | None:intergenic |
| GCAACATTGGGAGTATAAGC+AGG | 0.551772 | 1.3:+7613168 | MS.gene051517:CDS |
| TACAAAATTCAGGCCAAGAG+AGG | 0.552848 | 1.3:+7615538 | MS.gene051517:CDS |
| TGGAGTAAACTATATGGGAA+TGG | 0.555183 | 1.3:+7614617 | MS.gene051517:CDS |
| GTGCATGATAGCTTACCAAA+TGG | 0.555791 | 1.3:+7617178 | MS.gene051517:CDS |
| GACACTGGAATTGGCATACC+AGG | 0.557084 | 1.3:+7616254 | MS.gene051517:CDS |
| TGACCCTGACATGTTTGTTG+TGG | 0.560232 | 1.3:-7617268 | None:intergenic |
| AGAAAGAATGGCAAAGCTAA+GGG | 0.561686 | 1.3:+7614755 | MS.gene051517:CDS |
| CACAAATGCGTCCATACCGT+TGG | 0.565384 | 1.3:-7618036 | None:intergenic |
| TGGAACAGGTTGAATTAATG+GGG | 0.566185 | 1.3:+7616723 | MS.gene051517:intron |
| CAACAAACATGTCAGGGTCA+AGG | 0.567768 | 1.3:+7617271 | MS.gene051517:CDS |
| CAATCTTAGCAAACAAAGGA+AGG | 0.568976 | 1.3:+7613225 | MS.gene051517:CDS |
| ACACATGATTCTGGATAGGA+TGG | 0.570041 | 1.3:-7616121 | None:intergenic |
| CGTTGTGATGTGTACGACAC+TGG | 0.576348 | 1.3:+7616239 | MS.gene051517:CDS |
| ATGTACCTTCTAAATAAAGT+AGG | 0.578318 | 1.3:-7616418 | None:intergenic |
| AACTTGTGTGAGATTCTATG+AGG | 0.581575 | 1.3:-7616953 | None:intergenic |
| TCACTTCTAATGGATCCACC+AGG | 0.589068 | 1.3:+7616930 | MS.gene051517:CDS |
| TCACCTGCCTTGCTAAACAC+AGG | 0.591633 | 1.3:-7614588 | None:intergenic |
| AAGTCAATGATGAAGCAGCT+AGG | 0.595119 | 1.3:+7617403 | MS.gene051517:CDS |
| GAGGAAGAGATTAGTTATGG+GGG | 0.595191 | 1.3:+7613295 | MS.gene051517:CDS |
| CATCTCATACTTCTGGGTGA+TGG | 0.595990 | 1.3:-7616062 | None:intergenic |
| TTTCACCGGAGCAGGTGTGA+AGG | 0.596051 | 1.3:+7614455 | MS.gene051517:CDS |
| AACATGTCAGGGTCAAGGGA+AGG | 0.598087 | 1.3:+7617276 | MS.gene051517:CDS |
| GGAGGCGAGTATTCGGAGAG+AGG | 0.602582 | 1.3:+7613489 | MS.gene051517:CDS |
| TACCTCAATAGGTATATCAT+CGG | 0.603020 | 1.3:-7615630 | None:intergenic |
| TTGACAATCTTAGCAAACAA+AGG | 0.607034 | 1.3:+7613221 | MS.gene051517:CDS |
| TGTAGAACCTGTGTTTAGCA+AGG | 0.614185 | 1.3:+7614581 | MS.gene051517:CDS |
| TGATTGTATTGAAGACATGA+TGG | 0.615316 | 1.3:+7612943 | MS.gene051517:CDS |
| TTGGAATTGGAAGAATCCCT+CGG | 0.616918 | 1.3:-7616885 | None:intergenic |
| GAAGCAGCTAGGATATAGCA+TGG | 0.617920 | 1.3:+7617414 | MS.gene051517:CDS |
| GCTGAAGAATGTTTCGCCAA+CGG | 0.618188 | 1.3:+7618020 | MS.gene051517:CDS |
| TCAATGTGGCCAGAAGATGT+TGG | 0.623443 | 1.3:+7612983 | MS.gene051517:CDS |
| GAACCACAACAAACATGTCA+GGG | 0.628011 | 1.3:+7617265 | MS.gene051517:CDS |
| CTGTTGTTTACTGGAAACAA+CGG | 0.636650 | 1.3:+7613443 | MS.gene051517:CDS |
| GGAACAGGTTGAATTAATGG+GGG | 0.643012 | 1.3:+7616724 | MS.gene051517:intron |
| ATGCTAACAACACCAGAAAG+CGG | 0.643739 | 1.3:-7614998 | None:intergenic |
| TGAGATTCTATGAGGCCTGG+TGG | 0.645843 | 1.3:-7616945 | None:intergenic |
| AAGACAATCATCACCTGTGG+AGG | 0.647566 | 1.3:+7613555 | MS.gene051517:CDS |
| AATTGCAGTTCAGAAAGCAA+AGG | 0.648370 | 1.3:+7614782 | MS.gene051517:CDS |
| TGAAAGACAATCATCACCTG+TGG | 0.652639 | 1.3:+7613552 | MS.gene051517:CDS |
| AAAGCGCATCCACATTGTTG+CGG | 0.653392 | 1.3:+7617753 | MS.gene051517:CDS |
| GGAGTATAAGCAGGCTAACG+CGG | 0.654094 | 1.3:+7613177 | MS.gene051517:CDS |
| TTGAAGAGTTATCTTCAATG+TGG | 0.654257 | 1.3:+7612969 | MS.gene051517:CDS |
| AACGAAGATGACACAACCGA+GGG | 0.659560 | 1.3:+7616869 | MS.gene051517:CDS |
| GACCATGCTCGAAAATATGG+AGG | 0.667505 | 1.3:+7616454 | MS.gene051517:CDS |
| GAACAGGTTGAATTAATGGG+GGG | 0.672744 | 1.3:+7616725 | MS.gene051517:intron |
| GGATGTCGTGAATAATGGAG+TGG | 0.687300 | 1.3:+7617435 | MS.gene051517:CDS |
| TAACGAAGATGACACAACCG+AGG | 0.691038 | 1.3:+7616868 | MS.gene051517:CDS |
| GTGACTAGCAAAGAACATTG+TGG | 0.699673 | 1.3:+7616758 | MS.gene051517:CDS |
| GTATGGTAGTATGAATGTGA+AGG | 0.713387 | 1.3:-7616786 | None:intergenic |
| AATTGCTCACCGCAACAATG+TGG | 0.726029 | 1.3:-7617762 | None:intergenic |
| ATTCAACTGAAACAACAGTG+TGG | 0.734063 | 1.3:+7616213 | MS.gene051517:CDS |
| TACATGGCAAGATCTACCGG+CGG | 0.803486 | 1.3:+7613357 | MS.gene051517:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTCATATATTAAGATT+TGG | - | chr1.3:7614856-7614875 | None:intergenic | 10.0% |
| !! | TTAAATTATATATCTTCTAT+TGG | + | chr1.3:7613939-7613958 | MS.gene051517:intron | 10.0% |
| !! | TTTATACAATAAAAAAACTT+AGG | + | chr1.3:7617875-7617894 | MS.gene051517:intron | 10.0% |
| !!! | AATAATTTGATAACAAAAAA+TGG | - | chr1.3:7615169-7615188 | None:intergenic | 10.0% |
| !! | TGAATTAAACTTATAACTAA+AGG | - | chr1.3:7616574-7616593 | None:intergenic | 15.0% |
| !! | TTACAAATTATACAGATAAA+GGG | + | chr1.3:7613122-7613141 | MS.gene051517:CDS | 15.0% |
| !!! | AATGAATTTTTCAATCTAAA+AGG | + | chr1.3:7614013-7614032 | MS.gene051517:intron | 15.0% |
| !!! | ATTTTTAAGTGTAAATTACT+TGG | - | chr1.3:7615693-7615712 | None:intergenic | 15.0% |
| !!! | TGTTATTTTGGTTTTTTTTA+AGG | + | chr1.3:7614662-7614681 | MS.gene051517:intron | 15.0% |
| !! | ACAAAACCATGATAATAATA+AGG | + | chr1.3:7617156-7617175 | MS.gene051517:CDS | 20.0% |
| !! | AGATAACAAGATTAATATCA+TGG | + | chr1.3:7617375-7617394 | MS.gene051517:CDS | 20.0% |
| !! | CTTACAAATTATACAGATAA+AGG | + | chr1.3:7613121-7613140 | MS.gene051517:CDS | 20.0% |
| !! | TATATCTAATAAGATTTCCT+TGG | + | chr1.3:7616697-7616716 | MS.gene051517:intron | 20.0% |
| !!! | TAATTTTCTCGAATTATTAG+CGG | + | chr1.3:7613803-7613822 | MS.gene051517:intron | 20.0% |
| !!! | TACTTTATTTTATCCAAACA+AGG | - | chr1.3:7615226-7615245 | None:intergenic | 20.0% |
| !!! | TCAATAGATGATTTTTATCA+TGG | - | chr1.3:7615372-7615391 | None:intergenic | 20.0% |
| !!! | TCAATTCTAAAACAAAAGAA+AGG | - | chr1.3:7616300-7616319 | None:intergenic | 20.0% |
| !!! | TCAGGTAAAAATTGTTATTT+TGG | + | chr1.3:7614650-7614669 | MS.gene051517:intron | 20.0% |
| !!! | TTAGTTAAGAGTTTGTTAAT+CGG | - | chr1.3:7616674-7616693 | None:intergenic | 20.0% |
| !!! | TTTTAGTTGATTCATCATTT+TGG | + | chr1.3:7613965-7613984 | MS.gene051517:intron | 20.0% |
| ! | AAACAAGAGAATTGAAATTG+AGG | + | chr1.3:7613408-7613427 | MS.gene051517:CDS | 25.0% |
| ! | AAATGGAACAAATTCAATTG+AGG | + | chr1.3:7617030-7617049 | MS.gene051517:CDS | 25.0% |
| ! | AACAATTGGAGTAAACTATA+TGG | + | chr1.3:7614611-7614630 | MS.gene051517:CDS | 25.0% |
| ! | AAGCATGAAAGTTTATGTAA+TGG | + | chr1.3:7617127-7617146 | MS.gene051517:CDS | 25.0% |
| ! | AATAAAACCATTCACATTAC+AGG | + | chr1.3:7614816-7614835 | MS.gene051517:CDS | 25.0% |
| ! | ACAATTGGAGTAAACTATAT+GGG | + | chr1.3:7614612-7614631 | MS.gene051517:CDS | 25.0% |
| ! | ATGTACCTTCTAAATAAAGT+AGG | - | chr1.3:7616421-7616440 | None:intergenic | 25.0% |
| ! | ATTGCAGAAAATGTTAACAT+TGG | + | chr1.3:7615595-7615614 | MS.gene051517:CDS | 25.0% |
| ! | CAACTCATGTTTAAATACTA+CGG | - | chr1.3:7614062-7614081 | None:intergenic | 25.0% |
| ! | CAATAAAAAAACTTAGGAAG+TGG | + | chr1.3:7617881-7617900 | MS.gene051517:intron | 25.0% |
| ! | CTAAAGGAAACTAAAGATTA+AGG | - | chr1.3:7616558-7616577 | None:intergenic | 25.0% |
| ! | TAAATTACTTGGCATTTATC+TGG | - | chr1.3:7615682-7615701 | None:intergenic | 25.0% |
| ! | TAATAAGATTTCCTTGGATT+TGG | + | chr1.3:7616703-7616722 | MS.gene051517:intron | 25.0% |
| ! | TATCTGGTAATAATCAAGTA+TGG | - | chr1.3:7615666-7615685 | None:intergenic | 25.0% |
| ! | TCAAAATAATGTCGTATGAA+TGG | - | chr1.3:7617483-7617502 | None:intergenic | 25.0% |
| ! | TCAAGTAACATCATTTCAAA+TGG | + | chr1.3:7617013-7617032 | MS.gene051517:CDS | 25.0% |
| ! | TCTTCAACAAGAAGAATATT+CGG | - | chr1.3:7617358-7617377 | None:intergenic | 25.0% |
| ! | TTCAAACAACAAAACTGATT+AGG | + | chr1.3:7617638-7617657 | MS.gene051517:CDS | 25.0% |
| ! | TTCAGTTTAAATACAAGTGT+CGG | - | chr1.3:7613778-7613797 | None:intergenic | 25.0% |
| ! | TTCTTTCATGTAAATATTGC+AGG | + | chr1.3:7615712-7615731 | MS.gene051517:intron | 25.0% |
| ! | TTTAACATTCTGATTATCTC+TGG | + | chr1.3:7614205-7614224 | MS.gene051517:intron | 25.0% |
| ! | TTTACAGAAACCAATTGATA+AGG | + | chr1.3:7616617-7616636 | MS.gene051517:intron | 25.0% |
| !! | AATGTTAACATTTTCTGCAA+TGG | - | chr1.3:7615596-7615615 | None:intergenic | 25.0% |
| !! | CTATACCTACTTTATTTAGA+AGG | + | chr1.3:7616413-7616432 | MS.gene051517:CDS | 25.0% |
| !! | GATTAGTTATCCTTATCAAT+TGG | - | chr1.3:7616630-7616649 | None:intergenic | 25.0% |
| !! | TAATTTTTCCAGGACATTAT+AGG | + | chr1.3:7614414-7614433 | MS.gene051517:intron | 25.0% |
| !! | TAGGAAGTGGTTTTTAATAT+TGG | + | chr1.3:7617894-7617913 | MS.gene051517:intron | 25.0% |
| !! | TTGAAATGATGTTACTTGAA+TGG | - | chr1.3:7617012-7617031 | None:intergenic | 25.0% |
| !! | TTGATAACAAAAAATGGTGA+AGG | - | chr1.3:7615163-7615182 | None:intergenic | 25.0% |
| !!! | AAAGTTATTTCCTTTTTTGC+AGG | - | chr1.3:7614522-7614541 | None:intergenic | 25.0% |
| !!! | AGATTTTAAGAGAGAAGTAA+TGG | + | chr1.3:7614485-7614504 | MS.gene051517:CDS | 25.0% |
| !!! | AGCTGATTTTCAAAGATTAA+TGG | + | chr1.3:7613096-7613115 | MS.gene051517:CDS | 25.0% |
| !!! | TTATCTGTTTTCTCTAGAAT+CGG | + | chr1.3:7615799-7615818 | MS.gene051517:intron | 25.0% |
| !!! | TTATGCGATTTTTTGTGATA+CGG | + | chr1.3:7617566-7617585 | MS.gene051517:intron | 25.0% |
| !!! | TTCATACGACATTATTTTGA+TGG | + | chr1.3:7617483-7617502 | MS.gene051517:CDS | 25.0% |
| AACTTTCATGCTTAGTTTCT+AGG | - | chr1.3:7617120-7617139 | None:intergenic | 30.0% | |
| AATAAGTCGAAAACATCTCA+TGG | + | chr1.3:7615283-7615302 | MS.gene051517:intron | 30.0% | |
| AATAATATCGAGAAAATCGC+AGG | + | chr1.3:7614722-7614741 | MS.gene051517:intron | 30.0% | |
| AATGAGAGCAAAACAAATGT+TGG | + | chr1.3:7614949-7614968 | MS.gene051517:CDS | 30.0% | |
| AATTGGAAGCTACAAAATTC+AGG | + | chr1.3:7615528-7615547 | MS.gene051517:CDS | 30.0% | |
| ACTAGCAATATGTAAACAAC+TGG | + | chr1.3:7616489-7616508 | MS.gene051517:CDS | 30.0% | |
| AGATTCTCACAAATTTAGTC+AGG | + | chr1.3:7615762-7615781 | MS.gene051517:CDS | 30.0% | |
| ATGTATAGGAGCTATGAAAT+TGG | + | chr1.3:7615511-7615530 | MS.gene051517:intron | 30.0% | |
| ATTACCTCTTCTTGTAAACT+TGG | - | chr1.3:7614273-7614292 | None:intergenic | 30.0% | |
| CAATTCAACATAGAAAAACC+AGG | + | chr1.3:7613022-7613041 | MS.gene051517:CDS | 30.0% | |
| CAGAAAATGTTAACATTGGA+AGG | + | chr1.3:7615599-7615618 | MS.gene051517:CDS | 30.0% | |
| CATGCACCTTATTATTATCA+TGG | - | chr1.3:7617165-7617184 | None:intergenic | 30.0% | |
| CATTGTTAAACACATGATTC+TGG | - | chr1.3:7616133-7616152 | None:intergenic | 30.0% | |
| GAATGTTAAAACAGAAATCC+TGG | - | chr1.3:7614195-7614214 | None:intergenic | 30.0% | |
| GATTAAACCTGTAATGTGAA+TGG | - | chr1.3:7614826-7614845 | None:intergenic | 30.0% | |
| GGCTTATTTAATGCAACATT+GGG | + | chr1.3:7613156-7613175 | MS.gene051517:CDS | 30.0% | |
| TACCTCAATAGGTATATCAT+CGG | - | chr1.3:7615633-7615652 | None:intergenic | 30.0% | |
| TGATATACTTGATCTTTCCA+AGG | + | chr1.3:7615117-7615136 | MS.gene051517:CDS | 30.0% | |
| TGATTGTATTGAAGACATGA+TGG | + | chr1.3:7612943-7612962 | MS.gene051517:CDS | 30.0% | |
| TGGCTTATTTAATGCAACAT+TGG | + | chr1.3:7613155-7613174 | MS.gene051517:CDS | 30.0% | |
| TTAAACACATGATTCTGGAT+AGG | - | chr1.3:7616128-7616147 | None:intergenic | 30.0% | |
| TTACTTCTTCCAACATATCT+TGG | - | chr1.3:7613054-7613073 | None:intergenic | 30.0% | |
| TTGAAGAGTTATCTTCAATG+TGG | + | chr1.3:7612969-7612988 | MS.gene051517:CDS | 30.0% | |
| TTGACAATCTTAGCAAACAA+AGG | + | chr1.3:7613221-7613240 | MS.gene051517:CDS | 30.0% | |
| ! | AAAACTGATTAGGTCTTATG+AGG | + | chr1.3:7617648-7617667 | MS.gene051517:CDS | 30.0% |
| ! | AAGGAAGCACAAATAAAAGT+TGG | - | chr1.3:7615842-7615861 | None:intergenic | 30.0% |
| ! | AGTATGATACTGTTGTTTAC+TGG | + | chr1.3:7613434-7613453 | MS.gene051517:CDS | 30.0% |
| ! | CAAGACACTCTTTCAATTTT+AGG | - | chr1.3:7618079-7618098 | None:intergenic | 30.0% |
| ! | CAGAAATTTTATGCAGCTTT+TGG | - | chr1.3:7614354-7614373 | None:intergenic | 30.0% |
| ! | GTTTTTCGTATCTATTAACC+AGG | + | chr1.3:7614174-7614193 | MS.gene051517:intron | 30.0% |
| ! | TACTTGCTCATAATTTTTCC+AGG | + | chr1.3:7614404-7614423 | MS.gene051517:intron | 30.0% |
| ! | TCATAGCTTGCAAAAAATCT+TGG | + | chr1.3:7613869-7613888 | MS.gene051517:intron | 30.0% |
| ! | TCGCATAATGTGTGAATTTT+AGG | - | chr1.3:7617554-7617573 | None:intergenic | 30.0% |
| ! | TTGCAAAAAATCTTGGTGTA+TGG | + | chr1.3:7613876-7613895 | MS.gene051517:intron | 30.0% |
| ! | TTGGAACAGGTTGAATTAAT+GGG | + | chr1.3:7616722-7616741 | MS.gene051517:intron | 30.0% |
| ! | TTTGGAACAGGTTGAATTAA+TGG | + | chr1.3:7616721-7616740 | MS.gene051517:intron | 30.0% |
| ! | TTTTCCAAGTTTACAAGAAG+AGG | + | chr1.3:7614266-7614285 | MS.gene051517:CDS | 30.0% |
| !! | AGATTTTGAAAAACAGTTGG+AGG | + | chr1.3:7613471-7613490 | MS.gene051517:CDS | 30.0% |
| !! | AGTGTCTTGAAAAGTATCTA+AGG | + | chr1.3:7618090-7618109 | MS.gene051517:CDS | 30.0% |
| !! | GCAAGATTTTGAAAAACAGT+TGG | + | chr1.3:7613468-7613487 | MS.gene051517:CDS | 30.0% |
| !! | TAAAGAGAATAATCGATTCG+AGG | + | chr1.3:7613276-7613295 | MS.gene051517:CDS | 30.0% |
| !! | TATTTCAGCAAATGGATTGA+AGG | + | chr1.3:7616025-7616044 | MS.gene051517:CDS | 30.0% |
| !! | TTCAATTTTAGGAATGTCAC+TGG | - | chr1.3:7618068-7618087 | None:intergenic | 30.0% |
| !!! | ACTTTTGAGACAGAACTATT+TGG | + | chr1.3:7614537-7614556 | MS.gene051517:CDS | 30.0% |
| AAACAACTGGTAAACTCTTC+CGG | + | chr1.3:7616502-7616521 | MS.gene051517:intron | 35.0% | |
| AACTTGTGTGAGATTCTATG+AGG | - | chr1.3:7616956-7616975 | None:intergenic | 35.0% | |
| AATTGCAGTTCAGAAAGCAA+AGG | + | chr1.3:7614782-7614801 | MS.gene051517:CDS | 35.0% | |
| ACTCACTGTAATATACCTGA+TGG | - | chr1.3:7613654-7613673 | None:intergenic | 35.0% | |
| AGAAAGAATGGCAAAGCTAA+GGG | + | chr1.3:7614755-7614774 | MS.gene051517:CDS | 35.0% | |
| AGAAGAAGAATCTCACCAAA+AGG | + | chr1.3:7615983-7616002 | MS.gene051517:CDS | 35.0% | |
| AGAATCTCACACAAGTTCAA+TGG | + | chr1.3:7616959-7616978 | MS.gene051517:CDS | 35.0% | |
| AGATAAAGGGTCATCTCAAT+TGG | + | chr1.3:7613135-7613154 | MS.gene051517:CDS | 35.0% | |
| ATCAGAACTACGATACTTAG+AGG | - | chr1.3:7615871-7615890 | None:intergenic | 35.0% | |
| ATGAAACACGTATACTGACA+CGG | - | chr1.3:7613853-7613872 | None:intergenic | 35.0% | |
| ATGTAAATATTGCAGGTCAC+TGG | + | chr1.3:7615719-7615738 | MS.gene051517:intron | 35.0% | |
| ATTCAACTGAAACAACAGTG+TGG | + | chr1.3:7616213-7616232 | MS.gene051517:CDS | 35.0% | |
| CAAAATGCACCTGTTGTTAT+TGG | + | chr1.3:7613628-7613647 | MS.gene051517:CDS | 35.0% | |
| CAAACAACAACAGACAACTT+AGG | + | chr1.3:7617808-7617827 | MS.gene051517:intron | 35.0% | |
| CAATCTTAGCAAACAAAGGA+AGG | + | chr1.3:7613225-7613244 | MS.gene051517:CDS | 35.0% | |
| CACAATTACTAACACATACC+TGG | - | chr1.3:7616275-7616294 | None:intergenic | 35.0% | |
| CACATTCATACTACCATACA+AGG | + | chr1.3:7616790-7616809 | MS.gene051517:CDS | 35.0% | |
| CAGTCAACTATTTCAGCAAA+TGG | + | chr1.3:7616017-7616036 | MS.gene051517:CDS | 35.0% | |
| CATGTTATCTTCAGGAGATT+TGG | + | chr1.3:7615078-7615097 | MS.gene051517:CDS | 35.0% | |
| CATTACTTGCAAATGAAGCA+CGG | + | chr1.3:7613700-7613719 | MS.gene051517:intron | 35.0% | |
| CATTGTCTCCTCTATTACAA+GGG | - | chr1.3:7614933-7614952 | None:intergenic | 35.0% | |
| CCACTACACAACTTATGTAT+AGG | + | chr1.3:7615497-7615516 | MS.gene051517:intron | 35.0% | |
| CCTATACATAAGTTGTGTAG+TGG | - | chr1.3:7615500-7615519 | None:intergenic | 35.0% | |
| GGAAGTTGAGCAAAGAAAAT+TGG | + | chr1.3:7613246-7613265 | MS.gene051517:CDS | 35.0% | |
| GGTGAGAAAAAGAGAAAGAA+TGG | + | chr1.3:7614743-7614762 | MS.gene051517:intron | 35.0% | |
| GTATGGTAGTATGAATGTGA+AGG | - | chr1.3:7616789-7616808 | None:intergenic | 35.0% | |
| GTCAAATGAAAATGCTTTGC+CGG | - | chr1.3:7616524-7616543 | None:intergenic | 35.0% | |
| GTTGTAATGTGACACAGAAA+AGG | + | chr1.3:7616390-7616409 | MS.gene051517:intron | 35.0% | |
| GTTTACATGCCAGTTATGAA+TGG | + | chr1.3:7617613-7617632 | MS.gene051517:CDS | 35.0% | |
| GTTTGAAGACCATTCATAAC+TGG | - | chr1.3:7617625-7617644 | None:intergenic | 35.0% | |
| GTTTGACACTTTCACTTTAC+AGG | + | chr1.3:7617588-7617607 | MS.gene051517:intron | 35.0% | |
| TCAGAACTACGATACTTAGA+GGG | - | chr1.3:7615870-7615889 | None:intergenic | 35.0% | |
| TCATCTGCATCAATATGAGA+TGG | - | chr1.3:7617977-7617996 | None:intergenic | 35.0% | |
| TCATTGTCTCCTCTATTACA+AGG | - | chr1.3:7614934-7614953 | None:intergenic | 35.0% | |
| TCGGAGAGAGGATATATTAA+AGG | + | chr1.3:7613501-7613520 | MS.gene051517:CDS | 35.0% | |
| TGATCACATCTCATACTTCT+GGG | - | chr1.3:7616071-7616090 | None:intergenic | 35.0% | |
| TGATGATCCAGATGATCTTT+CGG | + | chr1.3:7616835-7616854 | MS.gene051517:CDS | 35.0% | |
| TGGAGTAAACTATATGGGAA+TGG | + | chr1.3:7614617-7614636 | MS.gene051517:CDS | 35.0% | |
| TTATGAGGAAACAGGCAATT+GGG | + | chr1.3:7617663-7617682 | MS.gene051517:CDS | 35.0% | |
| TTCTTGATCCCTTGTAATAG+AGG | + | chr1.3:7614922-7614941 | MS.gene051517:intron | 35.0% | |
| TTGATCACATCTCATACTTC+TGG | - | chr1.3:7616072-7616091 | None:intergenic | 35.0% | |
| TTGGATGTCATGTTATCTTC+AGG | + | chr1.3:7615070-7615089 | MS.gene051517:CDS | 35.0% | |
| TTGGTGAGATTCTTCTTCTT+TGG | - | chr1.3:7615982-7616001 | None:intergenic | 35.0% | |
| TTTACACATCAAGGCAAAGT+TGG | + | chr1.3:7615921-7615940 | MS.gene051517:CDS | 35.0% | |
| TTTGAGTAAGAATCGTTGTC+CGG | - | chr1.3:7616989-7617008 | None:intergenic | 35.0% | |
| ! | AAAAATCTTGGTGTATGGCT+TGG | + | chr1.3:7613881-7613900 | MS.gene051517:intron | 35.0% |
| ! | AAGAGAGAAGTAATGGAGAA+AGG | + | chr1.3:7614492-7614511 | MS.gene051517:CDS | 35.0% |
| ! | ACACAAGTTCAATGGTTTTC+CGG | + | chr1.3:7616967-7616986 | MS.gene051517:CDS | 35.0% |
| ! | ACAGATGTCGAAATTTTCAC+CGG | + | chr1.3:7614441-7614460 | MS.gene051517:CDS | 35.0% |
| ! | ACTGTTTTCATAAGCTGTGT+TGG | + | chr1.3:7615248-7615267 | MS.gene051517:intron | 35.0% |
| ! | ATTAGGTCTTATGAGGAAAC+AGG | + | chr1.3:7617655-7617674 | MS.gene051517:CDS | 35.0% |
| ! | CATTTGCTGAAATAGTTGAC+TGG | - | chr1.3:7616019-7616038 | None:intergenic | 35.0% |
| ! | CTGTTGTTTACTGGAAACAA+CGG | + | chr1.3:7613443-7613462 | MS.gene051517:CDS | 35.0% |
| ! | CTTTGAAAATCAGCTATAGC+TGG | - | chr1.3:7613091-7613110 | None:intergenic | 35.0% |
| ! | GAAGTGTTACATACCTCAAT+AGG | - | chr1.3:7615644-7615663 | None:intergenic | 35.0% |
| ! | TAAAGAGCAAAGACAGCTTT+TGG | + | chr1.3:7615051-7615070 | MS.gene051517:CDS | 35.0% |
| ! | TCGAGGAAGAGATTAGTTAT+GGG | + | chr1.3:7613293-7613312 | MS.gene051517:CDS | 35.0% |
| ! | TGGAACAGGTTGAATTAATG+GGG | + | chr1.3:7616723-7616742 | MS.gene051517:intron | 35.0% |
| ! | TTCGAGGAAGAGATTAGTTA+TGG | + | chr1.3:7613292-7613311 | MS.gene051517:CDS | 35.0% |
| !! | CTGTTTTTCCTATAATGTCC+TGG | - | chr1.3:7614425-7614444 | None:intergenic | 35.0% |
| !! | TTAAATACAAGTGTCGGTGT+CGG | - | chr1.3:7613772-7613791 | None:intergenic | 35.0% |
| !! | TTTTAGGAATGTCACTGGTT+TGG | - | chr1.3:7618063-7618082 | None:intergenic | 35.0% |
| !!! | CTGGAGATGTTTTAAGGATT+CGG | + | chr1.3:7615738-7615757 | MS.gene051517:CDS | 35.0% |
| !!! | TGTTTTCTCTAGAATCGGAT+TGG | + | chr1.3:7615804-7615823 | MS.gene051517:intron | 35.0% |
| AACAAACATGTCAGGGTCAA+GGG | + | chr1.3:7617272-7617291 | MS.gene051517:CDS | 40.0% | |
| AACATATCTTGGTCTCTTCC+TGG | - | chr1.3:7613043-7613062 | None:intergenic | 40.0% | |
| AAGTCAATGATGAAGCAGCT+AGG | + | chr1.3:7617403-7617422 | MS.gene051517:CDS | 40.0% | |
| ACACATGATTCTGGATAGGA+TGG | - | chr1.3:7616124-7616143 | None:intergenic | 40.0% | |
| ACATCAGTTCCAACATCTTC+TGG | - | chr1.3:7612995-7613014 | None:intergenic | 40.0% | |
| ACATGTCTTACTACCTCTCT+TGG | - | chr1.3:7615554-7615573 | None:intergenic | 40.0% | |
| ACATTCTGATTATCTCTGGC+AGG | + | chr1.3:7614209-7614228 | MS.gene051517:intron | 40.0% | |
| AGAACTACGATACTTAGAGG+GGG | - | chr1.3:7615868-7615887 | None:intergenic | 40.0% | |
| AGCATGGATGTCGTGAATAA+TGG | + | chr1.3:7617430-7617449 | MS.gene051517:CDS | 40.0% | |
| AGCCGATGATATACCTATTG+AGG | + | chr1.3:7615628-7615647 | MS.gene051517:CDS | 40.0% | |
| AGGAAGAGACCAAGATATGT+TGG | + | chr1.3:7613042-7613061 | MS.gene051517:CDS | 40.0% | |
| ATGCTAACAACACCAGAAAG+CGG | - | chr1.3:7615001-7615020 | None:intergenic | 40.0% | |
| CAAGCTGTTGAAACCTTGTA+TGG | - | chr1.3:7616806-7616825 | None:intergenic | 40.0% | |
| CAATTCCAACCACGAACTTT+GGG | + | chr1.3:7616899-7616918 | MS.gene051517:CDS | 40.0% | |
| CAGAACTACGATACTTAGAG+GGG | - | chr1.3:7615869-7615888 | None:intergenic | 40.0% | |
| CTAGAGTTTGCACTACCATT+TGG | - | chr1.3:7617196-7617215 | None:intergenic | 40.0% | |
| CTATACATGGCAAGATCTAC+CGG | + | chr1.3:7613354-7613373 | MS.gene051517:CDS | 40.0% | |
| CTTATGAGGAAACAGGCAAT+TGG | + | chr1.3:7617662-7617681 | MS.gene051517:CDS | 40.0% | |
| GAACCACAACAAACATGTCA+GGG | + | chr1.3:7617265-7617284 | MS.gene051517:CDS | 40.0% | |
| GAAGATGTTGGAACTGATGT+TGG | + | chr1.3:7612995-7613014 | MS.gene051517:CDS | 40.0% | |
| GAGAAAGAATGGCAAAGCTA+AGG | + | chr1.3:7614754-7614773 | MS.gene051517:CDS | 40.0% | |
| GCTGTCAAGTTTACACATCA+AGG | + | chr1.3:7615912-7615931 | MS.gene051517:CDS | 40.0% | |
| GGGAATGGAAATAACAGATC+AGG | + | chr1.3:7614632-7614651 | MS.gene051517:CDS | 40.0% | |
| GTGACTAGCAAAGAACATTG+TGG | + | chr1.3:7616758-7616777 | MS.gene051517:CDS | 40.0% | |
| GTGCATGATAGCTTACCAAA+TGG | + | chr1.3:7617178-7617197 | MS.gene051517:CDS | 40.0% | |
| TACAAAATTCAGGCCAAGAG+AGG | + | chr1.3:7615538-7615557 | MS.gene051517:CDS | 40.0% | |
| TCTCGAATTATTAGCGGTGT+CGG | + | chr1.3:7613809-7613828 | MS.gene051517:intron | 40.0% | |
| TCTTCTTCTTTGGCAAATGC+TGG | - | chr1.3:7615972-7615991 | None:intergenic | 40.0% | |
| TGAAAGACAATCATCACCTG+TGG | + | chr1.3:7613552-7613571 | MS.gene051517:CDS | 40.0% | |
| TGAACCACAACAAACATGTC+AGG | + | chr1.3:7617264-7617283 | MS.gene051517:CDS | 40.0% | |
| TGGACGATGCTTACTATACA+TGG | + | chr1.3:7613341-7613360 | MS.gene051517:CDS | 40.0% | |
| TGTAGAACCTGTGTTTAGCA+AGG | + | chr1.3:7614581-7614600 | MS.gene051517:CDS | 40.0% | |
| TGTATCCTTGCACACAATTG+CGG | - | chr1.3:7617855-7617874 | None:intergenic | 40.0% | |
| TGTGAAGACTACACCTTGTT+TGG | + | chr1.3:7615210-7615229 | MS.gene051517:intron | 40.0% | |
| TTCAACCTGTTCCAAATCCA+AGG | - | chr1.3:7616717-7616736 | None:intergenic | 40.0% | |
| TTCAATCTAAAAGGCCGACT+CGG | + | chr1.3:7614022-7614041 | MS.gene051517:intron | 40.0% | |
| TTGGAATTGGAAGAATCCCT+CGG | - | chr1.3:7616888-7616907 | None:intergenic | 40.0% | |
| TTTCTAACCTGACTCAACCT+TGG | - | chr1.3:7615137-7615156 | None:intergenic | 40.0% | |
| ! | AGGTCACTGGAGATGTTTTA+AGG | + | chr1.3:7615732-7615751 | MS.gene051517:intron | 40.0% |
| ! | ATTCGGCTTTAACGTCGATT+TGG | - | chr1.3:7617341-7617360 | None:intergenic | 40.0% |
| ! | CGAGGAAGAGATTAGTTATG+GGG | + | chr1.3:7613294-7613313 | MS.gene051517:CDS | 40.0% |
| ! | GAACAGGTTGAATTAATGGG+GGG | + | chr1.3:7616725-7616744 | MS.gene051517:intron | 40.0% |
| ! | GAGGAAGAGATTAGTTATGG+GGG | + | chr1.3:7613295-7613314 | MS.gene051517:CDS | 40.0% |
| ! | GATTTCCTTGGATTTGGAAC+AGG | + | chr1.3:7616709-7616728 | MS.gene051517:intron | 40.0% |
| ! | GGAACAGGTTGAATTAATGG+GGG | + | chr1.3:7616724-7616743 | MS.gene051517:intron | 40.0% |
| !! | ACAATGTGGATGCGCTTTTT+AGG | - | chr1.3:7617751-7617770 | None:intergenic | 40.0% |
| !! | CTGGTTCTGGAACAACATAA+AGG | - | chr1.3:7615953-7615972 | None:intergenic | 40.0% |
| !!! | CTTTTGAAGCTCTTGTTGCA+AGG | + | chr1.3:7614298-7614317 | MS.gene051517:intron | 40.0% |
| AAAGCGCATCCACATTGTTG+CGG | + | chr1.3:7617753-7617772 | MS.gene051517:CDS | 45.0% | |
| AACAGTTGGAGGCGAGTATT+CGG | + | chr1.3:7613482-7613501 | MS.gene051517:CDS | 45.0% | |
| AACGAAGATGACACAACCGA+GGG | + | chr1.3:7616869-7616888 | MS.gene051517:CDS | 45.0% | |
| AAGACAATCATCACCTGTGG+AGG | + | chr1.3:7613555-7613574 | MS.gene051517:CDS | 45.0% | |
| AAGCTGTGTTGGAGAGCTTA+TGG | + | chr1.3:7615259-7615278 | MS.gene051517:intron | 45.0% | |
| AATTGCTCACCGCAACAATG+TGG | - | chr1.3:7617765-7617784 | None:intergenic | 45.0% | |
| ACCTGATGGCCAATAACAAC+AGG | - | chr1.3:7613640-7613659 | None:intergenic | 45.0% | |
| AGAATGTTTCGCCAACGGTA+TGG | + | chr1.3:7618025-7618044 | MS.gene051517:CDS | 45.0% | |
| AGCAAGGCAGGTGAAACAAT+TGG | + | chr1.3:7614597-7614616 | MS.gene051517:CDS | 45.0% | |
| CAAACGTCCGGTTTCGATAT+TGG | + | chr1.3:7613321-7613340 | MS.gene051517:CDS | 45.0% | |
| CAACAAACATGTCAGGGTCA+AGG | + | chr1.3:7617271-7617290 | MS.gene051517:CDS | 45.0% | |
| CATCTCATACTTCTGGGTGA+TGG | - | chr1.3:7616065-7616084 | None:intergenic | 45.0% | |
| CCAAAGTTCGTGGTTGGAAT+TGG | - | chr1.3:7616901-7616920 | None:intergenic | 45.0% | |
| CCAATTCCAACCACGAACTT+TGG | + | chr1.3:7616898-7616917 | MS.gene051517:CDS | 45.0% | |
| GAAGCAGCTAGGATATAGCA+TGG | + | chr1.3:7617414-7617433 | MS.gene051517:CDS | 45.0% | |
| GACCATGCTCGAAAATATGG+AGG | + | chr1.3:7616454-7616473 | MS.gene051517:CDS | 45.0% | |
| GATCTTTCCAAGGTTGAGTC+AGG | + | chr1.3:7615127-7615146 | MS.gene051517:CDS | 45.0% | |
| GATGTGTACGACACTGGAAT+TGG | + | chr1.3:7616245-7616264 | MS.gene051517:CDS | 45.0% | |
| GCAGACCATGCTCGAAAATA+TGG | + | chr1.3:7616451-7616470 | MS.gene051517:CDS | 45.0% | |
| GCATCGTCCAATATCGAAAC+CGG | - | chr1.3:7613331-7613350 | None:intergenic | 45.0% | |
| GCTGAAGAATGTTTCGCCAA+CGG | + | chr1.3:7618020-7618039 | MS.gene051517:CDS | 45.0% | |
| TAACGAAGATGACACAACCG+AGG | + | chr1.3:7616868-7616887 | MS.gene051517:CDS | 45.0% | |
| TCAATGTGGCCAGAAGATGT+TGG | + | chr1.3:7612983-7613002 | MS.gene051517:CDS | 45.0% | |
| TCCACTTTACAACACCGAGT+CGG | - | chr1.3:7614039-7614058 | None:intergenic | 45.0% | |
| TCGACATCCGAAAGATCATC+TGG | - | chr1.3:7616845-7616864 | None:intergenic | 45.0% | |
| ! | AAATATGGAGGCACAGGTCT+AGG | + | chr1.3:7616466-7616485 | MS.gene051517:CDS | 45.0% |
| ! | ACCTGTTGTTATTGGCCATC+AGG | + | chr1.3:7613636-7613655 | MS.gene051517:CDS | 45.0% |
| ! | GCAACATTGGGAGTATAAGC+AGG | + | chr1.3:7613168-7613187 | MS.gene051517:CDS | 45.0% |
| ! | GGATGTCGTGAATAATGGAG+TGG | + | chr1.3:7617435-7617454 | MS.gene051517:CDS | 45.0% |
| ! | TCACTTCTAATGGATCCACC+AGG | + | chr1.3:7616930-7616949 | MS.gene051517:CDS | 45.0% |
| ! | TGACCCTGACATGTTTGTTG+TGG | - | chr1.3:7617271-7617290 | None:intergenic | 45.0% |
| !! | ATGTGGATGCGCTTTTTAGG+TGG | - | chr1.3:7617748-7617767 | None:intergenic | 45.0% |
| !! | GAAAGGAGTGCCTGCAAAAA+AGG | + | chr1.3:7614509-7614528 | MS.gene051517:CDS | 45.0% |
| !! | GCTTTCTGGTGTTGTTAGCA+TGG | + | chr1.3:7615000-7615019 | MS.gene051517:CDS | 45.0% |
| !! | GGCTCGCTTTTCACTTCTAA+TGG | + | chr1.3:7616920-7616939 | MS.gene051517:CDS | 45.0% |
| !! | TCTTTGGCAAATGCTGGTTC+TGG | - | chr1.3:7615966-7615985 | None:intergenic | 45.0% |
| !! | TGCCTCCATATTTTCGAGCA+TGG | - | chr1.3:7616459-7616478 | None:intergenic | 45.0% |
| !!! | ACTGGTCTTCTGTGACCTTT+TGG | - | chr1.3:7616001-7616020 | None:intergenic | 45.0% |
| AAAAGCGAGCCCAAAGTTCG+TGG | - | chr1.3:7616911-7616930 | None:intergenic | 50.0% | |
| AACATGTCAGGGTCAAGGGA+AGG | + | chr1.3:7617276-7617295 | MS.gene051517:CDS | 50.0% | |
| AATGAAGCACGGACACTCCT+CGG | + | chr1.3:7613711-7613730 | MS.gene051517:intron | 50.0% | |
| AGATTCCTTCACACCTGCTC+CGG | - | chr1.3:7614463-7614482 | None:intergenic | 50.0% | |
| AGTCTCCGCAATTGTGTGCA+AGG | + | chr1.3:7617847-7617866 | MS.gene051517:intron | 50.0% | |
| ATAAGCAGGCTAACGCGGTT+CGG | + | chr1.3:7613182-7613201 | MS.gene051517:CDS | 50.0% | |
| ATCTGTGACAGTTCCTCCAC+AGG | - | chr1.3:7613571-7613590 | None:intergenic | 50.0% | |
| CACAAATGCGTCCATACCGT+TGG | - | chr1.3:7618039-7618058 | None:intergenic | 50.0% | |
| CCAAGTAGCTACTCTGCAGT+CGG | + | chr1.3:7614094-7614113 | MS.gene051517:intron | 50.0% | |
| CGACTGCAGAGTAGCTACTT+GGG | - | chr1.3:7614096-7614115 | None:intergenic | 50.0% | |
| CGATACTTAGAGGGGGTAGA+AGG | - | chr1.3:7615861-7615880 | None:intergenic | 50.0% | |
| CGTTGTGATGTGTACGACAC+TGG | + | chr1.3:7616239-7616258 | MS.gene051517:CDS | 50.0% | |
| GAACCTGTGTTTAGCAAGGC+AGG | + | chr1.3:7614585-7614604 | MS.gene051517:CDS | 50.0% | |
| GACACTGGAATTGGCATACC+AGG | + | chr1.3:7616254-7616273 | MS.gene051517:CDS | 50.0% | |
| GACTGCAGAGTAGCTACTTG+GGG | - | chr1.3:7614095-7614114 | None:intergenic | 50.0% | |
| GGAGTATAAGCAGGCTAACG+CGG | + | chr1.3:7613177-7613196 | MS.gene051517:CDS | 50.0% | |
| GTCGGAGACGTAAGGACTAT+TGG | + | chr1.3:7614112-7614131 | MS.gene051517:intron | 50.0% | |
| GTGTGAGATTCTATGAGGCC+TGG | - | chr1.3:7616951-7616970 | None:intergenic | 50.0% | |
| TACATGGCAAGATCTACCGG+CGG | + | chr1.3:7613357-7613376 | MS.gene051517:CDS | 50.0% | |
| TCACCTGCCTTGCTAAACAC+AGG | - | chr1.3:7614591-7614610 | None:intergenic | 50.0% | |
| TGAGATTCTATGAGGCCTGG+TGG | - | chr1.3:7616948-7616967 | None:intergenic | 50.0% | |
| TTATGGGGGAGACAAACGTC+CGG | + | chr1.3:7613309-7613328 | MS.gene051517:CDS | 50.0% | |
| ! | GAGATAAGATCGCCGCTTTC+TGG | + | chr1.3:7614986-7615005 | MS.gene051517:CDS | 50.0% |
| ! | GCTCGAAAATATGGAGGCAC+AGG | + | chr1.3:7616460-7616479 | MS.gene051517:CDS | 50.0% |
| ! | GTCGAAATTTTCACCGGAGC+AGG | + | chr1.3:7614447-7614466 | MS.gene051517:CDS | 50.0% |
| !! | TCACTTTTCCTTATCGCCGC+CGG | - | chr1.3:7613376-7613395 | None:intergenic | 50.0% |
| AAGATCTACCGGCGGCGATA+AGG | + | chr1.3:7613365-7613384 | MS.gene051517:CDS | 55.0% | |
| ACTCTGCAGTCGGAGACGTA+AGG | + | chr1.3:7614104-7614123 | MS.gene051517:intron | 55.0% | |
| CCGACTGCAGAGTAGCTACT+TGG | - | chr1.3:7614097-7614116 | None:intergenic | 55.0% | |
| TGGGATGCTGCAAGAGAAGC+TGG | + | chr1.3:7617682-7617701 | MS.gene051517:CDS | 55.0% | |
| TGTCGGACACGACATGTGTC+CGG | - | chr1.3:7613755-7613774 | None:intergenic | 55.0% | |
| TTTCACCGGAGCAGGTGTGA+AGG | + | chr1.3:7614455-7614474 | MS.gene051517:CDS | 55.0% | |
| !! | ATGGCTCTGAACTGCGCGTA+TGG | - | chr1.3:7617464-7617483 | None:intergenic | 55.0% |
| !! | GCCGACTCGGTGTTGTAAAG+TGG | + | chr1.3:7614035-7614054 | MS.gene051517:intron | 55.0% |
| ACACGACATGTGTCCGGCAC+TGG | - | chr1.3:7613749-7613768 | None:intergenic | 60.0% | |
| ACTGGGACACGCCTAATCCG+AGG | - | chr1.3:7613731-7613750 | None:intergenic | 60.0% | |
| CACGACATGTGTCCGGCACT+GGG | - | chr1.3:7613748-7613767 | None:intergenic | 60.0% | |
| GATTAGGCGTGTCCCAGTGC+CGG | + | chr1.3:7613733-7613752 | MS.gene051517:intron | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | + | chr1.3:7613717-7613736 | MS.gene051517:intron | 60.0% | |
| GCGAGCCCAAAGTTCGTGGT+TGG | - | chr1.3:7616907-7616926 | None:intergenic | 60.0% | |
| GGAGGCGAGTATTCGGAGAG+AGG | + | chr1.3:7613489-7613508 | MS.gene051517:CDS | 60.0% | |
| !! | GCAATGGTGCTGCAGCTGTC+TGG | - | chr1.3:7615580-7615599 | None:intergenic | 60.0% |
| !! | GGTGTCGGTGTGTCAGTGTC+TGG | + | chr1.3:7613824-7613843 | MS.gene051517:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 7612923 | 7618115 | 7612923 | ID=MS.gene051517 |
| chr1.3 | mRNA | 7612923 | 7618115 | 7612923 | ID=MS.gene051517.t1;Parent=MS.gene051517 |
| chr1.3 | exon | 7612923 | 7613657 | 7612923 | ID=MS.gene051517.t1.exon1;Parent=MS.gene051517.t1 |
| chr1.3 | CDS | 7612923 | 7613657 | 7612923 | ID=cds.MS.gene051517.t1;Parent=MS.gene051517.t1 |
| chr1.3 | exon | 7614231 | 7614287 | 7614231 | ID=MS.gene051517.t1.exon2;Parent=MS.gene051517.t1 |
| chr1.3 | CDS | 7614231 | 7614287 | 7614231 | ID=cds.MS.gene051517.t1;Parent=MS.gene051517.t1 |
| chr1.3 | exon | 7614426 | 7614653 | 7614426 | ID=MS.gene051517.t1.exon3;Parent=MS.gene051517.t1 |
| chr1.3 | CDS | 7614426 | 7614653 | 7614426 | ID=cds.MS.gene051517.t1;Parent=MS.gene051517.t1 |
| chr1.3 | exon | 7614744 | 7614837 | 7614744 | ID=MS.gene051517.t1.exon4;Parent=MS.gene051517.t1 |
| chr1.3 | CDS | 7614744 | 7614837 | 7614744 | ID=cds.MS.gene051517.t1;Parent=MS.gene051517.t1 |
| chr1.3 | exon | 7614942 | 7615148 | 7614942 | ID=MS.gene051517.t1.exon5;Parent=MS.gene051517.t1 |
| chr1.3 | CDS | 7614942 | 7615148 | 7614942 | ID=cds.MS.gene051517.t1;Parent=MS.gene051517.t1 |
| chr1.3 | exon | 7615519 | 7615649 | 7615519 | ID=MS.gene051517.t1.exon6;Parent=MS.gene051517.t1 |
| chr1.3 | CDS | 7615519 | 7615649 | 7615519 | ID=cds.MS.gene051517.t1;Parent=MS.gene051517.t1 |
| chr1.3 | exon | 7615734 | 7615783 | 7615734 | ID=MS.gene051517.t1.exon7;Parent=MS.gene051517.t1 |
| chr1.3 | CDS | 7615734 | 7615783 | 7615734 | ID=cds.MS.gene051517.t1;Parent=MS.gene051517.t1 |
| chr1.3 | exon | 7615908 | 7616275 | 7615908 | ID=MS.gene051517.t1.exon8;Parent=MS.gene051517.t1 |
| chr1.3 | CDS | 7615908 | 7616275 | 7615908 | ID=cds.MS.gene051517.t1;Parent=MS.gene051517.t1 |
| chr1.3 | exon | 7616407 | 7616510 | 7616407 | ID=MS.gene051517.t1.exon9;Parent=MS.gene051517.t1 |
| chr1.3 | CDS | 7616407 | 7616510 | 7616407 | ID=cds.MS.gene051517.t1;Parent=MS.gene051517.t1 |
| chr1.3 | exon | 7616731 | 7617504 | 7616731 | ID=MS.gene051517.t1.exon10;Parent=MS.gene051517.t1 |
| chr1.3 | CDS | 7616731 | 7617504 | 7616731 | ID=cds.MS.gene051517.t1;Parent=MS.gene051517.t1 |
| chr1.3 | exon | 7617610 | 7617774 | 7617610 | ID=MS.gene051517.t1.exon11;Parent=MS.gene051517.t1 |
| chr1.3 | CDS | 7617610 | 7617774 | 7617610 | ID=cds.MS.gene051517.t1;Parent=MS.gene051517.t1 |
| chr1.3 | exon | 7617993 | 7618115 | 7617993 | ID=MS.gene051517.t1.exon12;Parent=MS.gene051517.t1 |
| chr1.3 | CDS | 7617993 | 7618115 | 7617993 | ID=cds.MS.gene051517.t1;Parent=MS.gene051517.t1 |
| Gene Sequence |
| Protein sequence |
