AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene99403

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99403.t1 MTR_5g087620 96.169 496 19 0 1 496 1 496 0.0 995
MS.gene99403.t1 MTR_2g098430 47.143 490 237 7 7 490 3 476 4.97e-152 443
MS.gene99403.t1 MTR_8g066610 33.266 493 296 12 10 493 9 477 2.82e-77 250
MS.gene99403.t1 MTR_0536s0020 32.406 503 294 14 1 489 9 479 5.37e-73 239
MS.gene99403.t1 MTR_5g045970 33.138 513 302 17 1 496 7 495 1.25e-72 239
MS.gene99403.t1 MTR_7g102550 32.794 494 290 15 10 484 9 479 6.44e-72 236
MS.gene99403.t1 MTR_7g117405 33.400 500 292 14 9 495 11 482 7.70e-72 236
MS.gene99403.t1 MTR_7g102560 32.370 519 290 16 3 495 2 485 2.34e-71 235
MS.gene99403.t1 MTR_4g485630 31.250 496 298 14 10 493 9 473 2.34e-70 232
MS.gene99403.t1 MTR_7g102460 31.890 508 306 16 4 495 3 486 2.61e-70 233
MS.gene99403.t1 MTR_4g117980 31.452 496 293 13 15 491 16 483 8.43e-70 231
MS.gene99403.t1 MTR_5g045960 31.102 508 305 17 7 495 6 487 9.67e-70 231
MS.gene99403.t1 MTR_7g055710 30.461 499 315 10 2 488 3 481 1.65e-69 230
MS.gene99403.t1 MTR_6g035265 30.691 492 294 13 15 491 16 475 8.16e-68 226
MS.gene99403.t1 MTR_1g062380 32.164 513 308 17 1 496 7 496 8.82e-68 226
MS.gene99403.t1 MTR_4g117960 30.894 492 296 11 15 489 16 480 9.14e-68 226
MS.gene99403.t1 MTR_7g070740 29.960 504 321 10 2 493 3 486 1.83e-67 225
MS.gene99403.t1 MTR_4g024020 30.980 510 313 16 4 496 3 490 6.08e-67 224
MS.gene99403.t1 MTR_4g117890 29.901 505 307 13 3 493 6 477 5.67e-66 221
MS.gene99403.t1 MTR_4g485590 33.654 416 231 10 10 425 9 379 1.83e-65 217
MS.gene99403.t1 MTR_7g070810 29.283 502 312 10 3 489 2 475 2.36e-65 219
MS.gene99403.t1 MTR_7g070800 30.739 501 310 12 6 493 2 478 3.41e-65 219
MS.gene99403.t1 MTR_7g102490 30.137 511 313 17 4 495 3 488 9.50e-65 218
MS.gene99403.t1 MTR_7g070780 30.426 493 308 12 10 490 11 480 2.01e-64 217
MS.gene99403.t1 MTR_7g070660 28.144 501 323 9 2 489 3 479 2.11e-64 217
MS.gene99403.t1 MTR_4g485620 31.857 474 290 15 22 486 1 450 3.60e-64 215
MS.gene99403.t1 MTR_0009s0240 33.691 466 270 15 5 461 2 437 3.73e-64 215
MS.gene99403.t1 MTR_4g031800 29.921 508 302 12 6 494 4 476 3.74e-64 216
MS.gene99403.t1 MTR_7g070940 29.842 506 299 14 3 490 2 469 4.75e-64 216
MS.gene99403.t1 MTR_4g108250 28.543 508 327 10 2 493 3 490 5.26e-64 216
MS.gene99403.t1 MTR_2g034990 30.906 508 300 14 5 491 6 483 2.73e-63 214
MS.gene99403.t1 MTR_7g070910 29.941 511 313 13 2 493 3 487 5.07e-63 213
MS.gene99403.t1 MTR_7g070610 29.577 497 317 10 10 493 13 489 6.01e-63 213
MS.gene99403.t1 MTR_7g071040 28.515 505 328 10 2 493 9 493 6.37e-63 213
MS.gene99403.t1 MTR_0536s0010 29.563 504 302 15 4 493 15 479 8.28e-63 212
MS.gene99403.t1 MTR_7g102450 31.600 500 293 13 9 495 10 473 8.38e-63 212
MS.gene99403.t1 MTR_6g035185 30.060 499 297 14 15 491 16 484 8.25e-61 207
MS.gene99403.t1 MTR_2g059240 32.573 482 289 12 9 486 12 461 2.84e-60 205
MS.gene99403.t1 MTR_4g117950 29.920 498 298 15 6 489 2 462 3.11e-60 205
MS.gene99403.t1 MTR_7g102520 30.952 504 303 15 10 494 12 489 7.56e-60 205
MS.gene99403.t1 MTR_8g074550 30.361 527 284 17 7 493 5 488 9.51e-60 205
MS.gene99403.t1 MTR_7g070870 29.697 495 296 12 1 489 10 458 2.35e-58 200
MS.gene99403.t1 MTR_8g071070 30.693 505 302 15 5 496 2 471 3.99e-58 200
MS.gene99403.t1 MTR_4g118000 28.310 491 299 13 15 491 17 468 7.30e-58 199
MS.gene99403.t1 MTR_2g035020 29.191 507 312 13 5 492 6 484 1.34e-57 199
MS.gene99403.t1 MTR_3g009510 30.452 509 288 18 11 492 6 475 1.49e-57 198
MS.gene99403.t1 MTR_7g070860 29.175 497 301 13 10 493 7 465 3.67e-57 197
MS.gene99403.t1 MTR_5g027210 27.410 529 290 12 11 495 5 483 3.93e-57 197
MS.gene99403.t1 MTR_5g464760 30.994 513 290 20 6 494 8 480 4.58e-57 197
MS.gene99403.t1 MTR_8g466240 29.388 490 296 14 10 493 8 453 8.57e-57 196
MS.gene99403.t1 MTR_6g033625 30.677 502 289 14 8 491 2 462 1.15e-56 196
MS.gene99403.t1 MTR_8g032950 28.571 504 317 12 5 492 7 483 3.63e-56 195
MS.gene99403.t1 MTR_6g038220 29.459 499 301 16 2 495 3 455 7.67e-56 193
MS.gene99403.t1 MTR_7g012120 29.283 502 309 14 5 489 11 483 1.18e-55 193
MS.gene99403.t1 MTR_5g039900 28.980 490 314 10 1 476 1 470 1.89e-55 193
MS.gene99403.t1 MTR_8g009055 30.966 507 275 18 6 486 2 459 1.99e-55 192
MS.gene99403.t1 MTR_4g008630 31.568 491 289 15 11 495 15 464 3.09e-55 192
MS.gene99403.t1 MTR_7g070930 28.317 505 329 11 2 493 6 490 5.70e-55 192
MS.gene99403.t1 MTR_6g033615 30.661 499 279 13 8 491 2 448 1.52e-54 190
MS.gene99403.t1 MTR_5g040030 28.099 484 322 11 3 476 7 474 1.60e-54 191
MS.gene99403.t1 MTR_6g035295 28.543 494 316 11 11 489 13 484 2.72e-54 190
MS.gene99403.t1 MTR_5g016660 27.701 509 332 12 1 496 1 486 2.78e-54 190
MS.gene99403.t1 MTR_3g479520 29.320 515 298 18 6 495 11 484 4.25e-54 189
MS.gene99403.t1 MTR_8g044140 29.741 464 294 10 41 493 6 448 1.37e-53 187
MS.gene99403.t1 MTR_0036s0220 28.039 510 311 17 4 494 6 478 4.17e-53 186
MS.gene99403.t1 MTR_8g006710 30.957 491 283 15 7 479 3 455 9.33e-53 185
MS.gene99403.t1 MTR_5g464810 29.901 505 296 18 10 494 12 478 1.33e-52 185
MS.gene99403.t1 MTR_5g064240 29.901 505 296 18 10 494 12 478 1.33e-52 185
MS.gene99403.t1 MTR_1g029540 29.328 491 289 16 15 495 19 461 1.84e-52 184
MS.gene99403.t1 MTR_6g488280 30.723 498 286 19 6 486 2 457 1.84e-52 184
MS.gene99403.t1 MTR_0428s0010 30.723 498 286 19 6 486 2 457 1.84e-52 184
MS.gene99403.t1 MTR_5g035560 29.234 496 288 17 10 495 11 453 1.98e-52 185
MS.gene99403.t1 MTR_6g023665 30.938 501 281 19 6 486 9 464 2.39e-52 184
MS.gene99403.t1 MTR_5g029800 28.088 502 306 14 11 491 12 479 2.56e-52 184
MS.gene99403.t1 MTR_2g008210 30.000 510 295 19 7 494 8 477 2.67e-52 184
MS.gene99403.t1 MTR_0184s0040 30.321 498 287 17 7 486 18 473 4.24e-52 184
MS.gene99403.t1 MTR_0078s0190 30.321 498 287 17 7 486 18 473 4.24e-52 184
MS.gene99403.t1 MTR_4g485640 29.375 480 279 12 20 482 219 655 5.01e-52 187
MS.gene99403.t1 MTR_5g035580 29.532 491 283 17 10 490 13 450 5.34e-52 183
MS.gene99403.t1 MTR_2g035040 32.723 382 223 11 130 493 24 389 6.05e-52 181
MS.gene99403.t1 MTR_4g094220 29.448 489 289 18 8 472 5 461 6.35e-52 183
MS.gene99403.t1 MTR_6g033675 31.148 488 269 22 8 471 2 446 7.34e-52 183
MS.gene99403.t1 MTR_6g038240 28.088 502 301 17 3 494 4 455 1.07e-51 182
MS.gene99403.t1 MTR_3g079480 29.449 472 287 15 7 461 18 460 1.52e-51 182
MS.gene99403.t1 MTR_8g008990 30.584 497 292 16 6 486 2 461 1.75e-51 182
MS.gene99403.t1 MTR_6g033725 30.470 489 268 20 8 471 2 443 3.59e-51 181
MS.gene99403.t1 MTR_8g465670 30.375 507 289 17 6 490 3 467 4.10e-51 181
MS.gene99403.t1 MTR_7g071050 28.216 482 274 14 2 474 5 423 5.63e-51 179
MS.gene99403.t1 MTR_7g046490 30.178 507 284 14 6 490 2 460 6.97e-51 180
MS.gene99403.t1 MTR_6g038200 28.803 493 297 18 10 495 11 456 9.01e-51 179
MS.gene99403.t1 MTR_0078s0060 30.101 495 292 16 7 486 3 458 1.15e-50 179
MS.gene99403.t1 MTR_0078s0010 30.040 496 292 15 7 486 3 459 1.52e-50 179
MS.gene99403.t1 MTR_5g019580 32.591 494 257 19 7 465 4 456 1.69e-50 180
MS.gene99403.t1 MTR_6g038230 29.091 495 293 19 10 495 11 456 5.04e-50 177
MS.gene99403.t1 MTR_8g009050 29.482 502 295 15 6 489 2 462 5.34e-50 178
MS.gene99403.t1 MTR_6g014270 26.744 516 314 18 5 494 2 479 6.53e-50 178
MS.gene99403.t1 MTR_5g067170 28.226 496 307 14 15 491 16 481 8.49e-50 177
MS.gene99403.t1 MTR_6g014250 27.778 522 305 23 1 494 1 478 1.55e-49 177
MS.gene99403.t1 MTR_8g090095 27.835 485 303 14 15 490 30 476 1.64e-49 177
MS.gene99403.t1 MTR_6g013440 26.499 517 308 19 7 494 8 481 1.92e-49 177
MS.gene99403.t1 MTR_6g014290 27.168 519 312 22 1 494 1 478 2.29e-49 176
MS.gene99403.t1 MTR_5g019580 31.393 481 252 17 7 465 56 480 3.95e-49 176
MS.gene99403.t1 MTR_8g006730 29.234 496 296 16 7 486 3 459 1.31e-48 174
MS.gene99403.t1 MTR_6g033660 29.697 495 293 14 11 491 5 458 2.07e-48 174
MS.gene99403.t1 MTR_1g040310 28.189 486 315 11 12 486 17 479 2.36e-48 174
MS.gene99403.t1 MTR_1g019510 29.142 501 295 16 6 489 2 459 3.07e-48 173
MS.gene99403.t1 MTR_6g014187 27.572 486 298 20 1 464 1 454 6.66e-48 172
MS.gene99403.t1 MTR_8g006220 28.681 523 286 17 6 490 2 475 8.01e-48 172
MS.gene99403.t1 MTR_3g479490 28.265 513 306 20 6 495 2 475 9.07e-48 172
MS.gene99403.t1 MTR_8g059425 26.104 521 315 19 1 494 1 478 9.46e-48 172
MS.gene99403.t1 MTR_3g008010 27.326 516 315 23 1 494 1 478 2.10e-47 171
MS.gene99403.t1 MTR_6g014020 26.499 517 320 21 1 494 1 480 2.88e-47 171
MS.gene99403.t1 MTR_0184s0030 29.709 515 276 19 7 489 3 463 7.04e-47 169
MS.gene99403.t1 MTR_8g009067 29.938 481 275 13 6 462 2 444 1.21e-46 169
MS.gene99403.t1 MTR_6g014040 26.163 516 324 19 1 494 1 481 1.64e-46 169
MS.gene99403.t1 MTR_7g117170 29.980 507 274 22 5 482 10 464 2.97e-46 168
MS.gene99403.t1 MTR_7g047030 28.261 506 308 14 7 496 3 469 3.92e-46 167
MS.gene99403.t1 MTR_7g047270 28.261 506 308 14 7 496 3 469 3.92e-46 167
MS.gene99403.t1 MTR_6g014200 27.146 501 297 17 5 476 2 463 4.64e-46 167
MS.gene99403.t1 MTR_6g014220 26.654 514 321 19 1 494 1 478 4.87e-46 167
MS.gene99403.t1 MTR_6g013960 27.713 516 315 23 1 494 1 480 5.08e-46 167
MS.gene99403.t1 MTR_8g006270 29.470 509 285 19 6 490 2 460 8.24e-46 166
MS.gene99403.t1 MTR_6g014050 27.856 499 305 20 1 476 1 467 9.14e-46 167
MS.gene99403.t1 MTR_8g009073 29.307 505 271 18 6 475 2 455 1.14e-45 166
MS.gene99403.t1 MTR_7g080900 28.370 497 302 17 7 496 9 458 2.64e-45 165
MS.gene99403.t1 MTR_8g027870 28.657 499 291 17 6 486 14 465 2.84e-45 165
MS.gene99403.t1 MTR_4g064987 29.116 498 287 18 8 496 6 446 2.96e-45 164
MS.gene99403.t1 MTR_6g014150 26.163 516 315 18 5 494 2 477 3.11e-45 165
MS.gene99403.t1 MTR_3g479470 28.994 507 300 20 7 493 10 476 3.29e-45 165
MS.gene99403.t1 MTR_8g027885 28.400 500 291 16 6 486 14 465 7.51e-45 164
MS.gene99403.t1 MTR_5g090620 26.255 518 311 17 7 493 2 479 1.03e-44 164
MS.gene99403.t1 MTR_7g011470 27.593 511 308 21 1 494 1 466 1.71e-44 163
MS.gene99403.t1 MTR_7g470610 33.546 313 171 6 139 440 5 291 1.96e-44 158
MS.gene99403.t1 MTR_7g070583 33.546 313 171 6 139 440 5 291 1.96e-44 158
MS.gene99403.t1 MTR_6g013990 26.769 523 309 18 1 494 1 478 2.10e-44 163
MS.gene99403.t1 MTR_0288s0020 25.631 515 308 18 1 494 1 461 2.30e-44 162
MS.gene99403.t1 MTR_8g008970 29.839 496 280 14 6 475 2 455 2.34e-44 167
MS.gene99403.t1 MTR_8g008970 32.794 247 137 7 252 495 573 793 3.82e-31 128
MS.gene99403.t1 MTR_6g013450 26.731 520 316 21 1 494 1 481 2.49e-44 163
MS.gene99403.t1 MTR_7g011470 28.039 510 303 23 1 494 1 462 2.70e-44 162
MS.gene99403.t1 MTR_7g067120 27.291 491 290 13 3 493 2 425 3.23e-44 161
MS.gene99403.t1 MTR_4g064987 29.026 503 287 18 8 496 6 452 3.38e-44 162
MS.gene99403.t1 MTR_8g009063 28.543 508 292 18 6 489 9 469 4.81e-44 162
MS.gene99403.t1 MTR_8g009067 38.247 251 129 5 226 462 88 326 4.89e-44 159
MS.gene99403.t1 MTR_6g005600 28.056 499 285 18 6 476 2 454 5.58e-44 162
MS.gene99403.t1 MTR_6g011340 27.255 510 325 17 1 494 1 480 1.11e-43 161
MS.gene99403.t1 MTR_1g107380 28.487 509 310 20 2 494 3 473 1.85e-43 160
MS.gene99403.t1 MTR_8g068360 30.369 461 271 16 6 452 8 432 1.89e-43 160
MS.gene99403.t1 MTR_6g014170 26.550 516 303 20 1 494 1 462 2.21e-43 160
MS.gene99403.t1 MTR_8g009073 35.192 287 158 7 203 475 54 326 2.38e-43 156
MS.gene99403.t1 MTR_5g072830 28.628 503 276 18 10 493 10 448 3.28e-43 159
MS.gene99403.t1 MTR_5g072810 27.455 499 290 16 10 493 12 453 6.47e-43 158
MS.gene99403.t1 MTR_8g012745 30.090 442 253 16 72 489 55 464 8.69e-43 158
MS.gene99403.t1 MTR_7g080935 26.707 498 305 16 8 496 9 455 1.22e-42 157
MS.gene99403.t1 MTR_8g012635 29.487 468 247 20 50 489 55 467 1.40e-42 158
MS.gene99403.t1 MTR_1g107350 27.126 494 327 14 5 493 3 468 1.42e-42 158
MS.gene99403.t1 MTR_7g067330 27.607 489 285 14 3 490 2 422 1.97e-42 156
MS.gene99403.t1 MTR_8g083290 29.225 503 294 21 9 490 2 463 2.00e-42 157
MS.gene99403.t1 MTR_5g090660 27.485 513 296 20 7 487 2 470 2.05e-42 159
MS.gene99403.t1 MTR_3g084530 27.745 501 311 15 10 493 6 472 3.74e-42 156
MS.gene99403.t1 MTR_5g090580 26.667 510 306 16 7 487 2 472 4.76e-42 156
MS.gene99403.t1 MTR_6g014310 27.220 518 316 20 1 494 1 481 5.34e-42 156
MS.gene99403.t1 MTR_5g072840 27.756 508 276 21 10 494 10 449 5.59e-42 155
MS.gene99403.t1 MTR_8g012650 35.932 295 149 9 213 489 195 467 5.63e-42 156
MS.gene99403.t1 MTR_5g090700 26.275 510 288 19 7 476 2 463 6.28e-42 156
MS.gene99403.t1 MTR_8g077590 36.823 277 140 10 225 489 209 462 9.09e-42 155
MS.gene99403.t1 MTR_8g068340 29.374 463 276 13 6 453 8 434 1.09e-41 155
MS.gene99403.t1 MTR_8g068330 29.851 469 286 16 6 464 4 439 1.21e-41 155
MS.gene99403.t1 MTR_1g019520 40.187 214 114 4 283 489 2 208 1.30e-41 148
MS.gene99403.t1 MTR_5g070040 28.402 507 299 21 6 494 7 467 1.32e-41 155
MS.gene99403.t1 MTR_7g080950 24.901 506 308 12 6 496 2 450 1.58e-41 154
MS.gene99403.t1 MTR_6g013900 26.154 520 317 22 1 494 1 479 2.91e-41 154
MS.gene99403.t1 MTR_6g013920 26.796 515 320 23 1 494 1 479 3.16e-41 154
MS.gene99403.t1 MTR_5g072820 28.320 512 284 19 1 493 1 448 3.48e-41 153
MS.gene99403.t1 MTR_6g038300 27.435 503 302 20 3 493 4 455 5.80e-41 153
MS.gene99403.t1 MTR_8g012630 39.450 218 111 5 284 489 203 411 1.37e-40 151
MS.gene99403.t1 MTR_5g016480 28.542 487 309 19 18 495 16 472 2.35e-40 152
MS.gene99403.t1 MTR_7g080940 26.506 498 306 16 8 496 9 455 2.45e-40 151
MS.gene99403.t1 MTR_3g031450 25.397 504 290 19 10 495 18 453 2.84e-40 151
MS.gene99403.t1 MTR_5g066410 28.157 483 303 14 13 491 1 443 3.53e-40 150
MS.gene99403.t1 MTR_8g006260 35.740 277 146 9 225 486 208 467 4.53e-40 151
MS.gene99403.t1 MTR_3g069710 27.846 492 299 16 11 496 13 454 7.96e-40 150
MS.gene99403.t1 MTR_7g013200 25.355 493 299 16 9 491 4 437 1.65e-39 149
MS.gene99403.t1 MTR_8g007565 27.530 494 321 17 6 491 3 467 1.88e-39 149
MS.gene99403.t1 MTR_4g128690 28.655 513 264 20 10 496 15 451 2.02e-39 149
MS.gene99403.t1 MTR_1g107315 27.525 505 311 17 5 493 3 468 3.72e-39 148
MS.gene99403.t1 MTR_5g058320 26.172 512 313 22 1 494 1 465 4.42e-39 148
MS.gene99403.t1 MTR_1g032490 27.200 500 315 18 10 496 10 473 4.83e-39 148
MS.gene99403.t1 MTR_8g007650 28.755 466 295 17 6 463 3 439 5.32e-39 148
MS.gene99403.t1 MTR_8g088560 28.261 506 301 16 1 493 1 457 6.69e-39 147
MS.gene99403.t1 MTR_2g046820 28.092 477 281 20 20 476 15 449 1.18e-38 147
MS.gene99403.t1 MTR_2g046750 28.958 480 290 21 12 476 9 452 1.20e-38 147
MS.gene99403.t1 MTR_5g090610 26.139 505 308 18 7 491 2 461 1.38e-38 146
MS.gene99403.t1 MTR_3g031400 24.851 503 292 19 10 495 18 451 1.65e-38 146
MS.gene99403.t1 MTR_4g128720 27.600 500 293 18 7 493 12 455 2.91e-38 145
MS.gene99403.t1 MTR_3g084520 25.692 506 324 13 10 496 6 478 3.11e-38 145
MS.gene99403.t1 MTR_3g084540 26.869 495 318 14 10 488 6 472 3.66e-38 145
MS.gene99403.t1 MTR_8g012730 37.387 222 111 5 287 496 99 304 9.42e-38 140
MS.gene99403.t1 MTR_6g014190 29.605 304 192 8 193 494 4 287 1.05e-37 140
MS.gene99403.t1 MTR_7g013180 25.941 478 299 15 9 477 4 435 1.40e-37 143
MS.gene99403.t1 MTR_5g098930 25.241 519 300 21 7 490 2 467 1.81e-37 144
MS.gene99403.t1 MTR_2g046620 27.766 461 281 18 3 452 8 427 2.54e-37 143
MS.gene99403.t1 MTR_7g013240 26.078 487 300 16 9 490 5 436 3.32e-37 142
MS.gene99403.t1 MTR_2g040530 27.789 475 287 19 20 476 15 451 4.91e-37 142
MS.gene99403.t1 MTR_7g013220 25.845 503 295 20 9 491 4 448 9.26e-37 141
MS.gene99403.t1 MTR_5g090670 26.078 510 311 20 7 487 2 474 1.01e-36 142
MS.gene99403.t1 MTR_2g008220 27.412 456 293 13 3 452 7 430 1.56e-36 141
MS.gene99403.t1 MTR_6g042310 27.004 474 294 18 7 467 15 449 1.81e-36 140
MS.gene99403.t1 MTR_3g009490 42.487 193 94 8 310 492 2 187 3.48e-36 133
MS.gene99403.t1 MTR_1g107285 25.882 510 310 19 4 493 2 463 4.70e-36 139
MS.gene99403.t1 MTR_5g070090 35.145 276 142 11 224 488 211 460 8.13e-36 139
MS.gene99403.t1 MTR_7g013260 25.355 493 297 18 9 490 5 437 1.43e-35 137
MS.gene99403.t1 MTR_5g090630 25.832 511 300 17 7 487 2 463 1.75e-35 138
MS.gene99403.t1 MTR_3g049970 27.344 512 305 24 4 493 3 469 3.36e-35 137
MS.gene99403.t1 MTR_7g039550 30.888 259 165 3 245 495 15 267 6.13e-35 132
MS.gene99403.t1 MTR_8g083280 27.327 505 298 20 11 495 8 463 7.45e-35 136
MS.gene99403.t1 MTR_5g031830 28.376 511 289 22 9 493 11 470 7.46e-35 136
MS.gene99403.t1 MTR_8g056740 30.667 300 157 7 126 425 51 299 9.99e-35 134
MS.gene99403.t1 MTR_1g107375 25.889 506 303 17 5 493 3 453 1.25e-34 135
MS.gene99403.t1 MTR_3g069690 25.610 492 307 17 1 483 1 442 1.41e-34 135
MS.gene99403.t1 MTR_4g095008 27.126 494 312 18 10 494 11 465 1.63e-34 136
MS.gene99403.t1 MTR_5g072860 25.737 509 296 18 10 495 18 467 1.96e-34 135
MS.gene99403.t1 MTR_0891s0010 32.014 278 160 8 195 463 6 263 2.19e-34 131
MS.gene99403.t1 MTR_5g031840 26.692 517 288 21 9 493 4 461 2.51e-34 134
MS.gene99403.t1 MTR_4g123553 27.669 459 284 17 3 452 7 426 4.84e-34 134
MS.gene99403.t1 MTR_6g014300 25.145 517 299 23 7 494 9 466 6.46e-34 134
MS.gene99403.t1 MTR_8g007585 33.491 212 124 5 283 494 198 392 7.02e-34 132
MS.gene99403.t1 MTR_3g479610 30.599 317 194 11 183 495 20 314 7.68e-34 130
MS.gene99403.t1 MTR_2g008225 25.697 502 319 17 3 495 8 464 7.86e-34 133
MS.gene99403.t1 MTR_5g031860 28.088 502 301 20 9 493 11 469 9.87e-34 133
MS.gene99403.t1 MTR_4g079270 26.369 493 314 13 10 496 8 457 9.95e-34 133
MS.gene99403.t1 MTR_4g082820 30.536 429 235 18 10 417 7 393 1.12e-33 133
MS.gene99403.t1 MTR_4g094920 35.102 245 148 6 251 494 246 480 2.84e-33 132
MS.gene99403.t1 MTR_2g008226 26.489 487 295 19 1 465 1 446 4.66e-33 131
MS.gene99403.t1 MTR_5g090600 24.303 502 307 13 7 487 2 451 4.99e-33 131
MS.gene99403.t1 MTR_4g079250 26.978 493 311 14 10 496 8 457 1.21e-32 130
MS.gene99403.t1 MTR_6g014240 32.735 223 133 6 252 472 222 429 1.59e-32 129
MS.gene99403.t1 MTR_1g090270 25.376 465 288 16 10 459 15 435 3.68e-32 128
MS.gene99403.t1 MTR_8g043470 24.155 414 231 11 72 470 13 358 3.70e-32 127
MS.gene99403.t1 MTR_1g107365 25.451 499 305 17 10 493 45 491 5.22e-32 129
MS.gene99403.t1 MTR_8g064870 27.525 505 301 22 11 493 12 473 7.87e-32 128
MS.gene99403.t1 MTR_6g036650 26.201 458 292 15 6 452 14 436 2.18e-31 126
MS.gene99403.t1 MTR_8g064880 27.586 464 276 21 5 444 4 431 2.46e-31 126
MS.gene99403.t1 MTR_5g075440 24.502 502 311 15 10 496 10 458 5.10e-31 125
MS.gene99403.t1 MTR_3g435310 26.049 453 255 15 3 452 10 385 6.16e-31 124
MS.gene99403.t1 MTR_1g107360 26.753 385 236 13 124 495 112 463 7.59e-31 125
MS.gene99403.t1 MTR_2g083430 25.673 483 294 17 10 474 8 443 9.20e-31 124
MS.gene99403.t1 MTR_0477s0010 32.407 216 121 6 283 494 123 317 1.95e-30 120
MS.gene99403.t1 MTR_4g082810 29.604 429 241 15 10 417 7 395 2.75e-30 122
MS.gene99403.t1 MTR_8g009840 36.538 208 108 5 302 495 333 530 9.02e-30 122
MS.gene99403.t1 MTR_2g014900 26.915 457 285 15 10 457 7 423 5.30e-29 119
MS.gene99403.t1 MTR_7g070760 33.005 203 105 1 225 427 30 201 2.12e-28 112
MS.gene99403.t1 MTR_4g077960 26.637 443 274 18 20 452 2 403 3.57e-28 117
MS.gene99403.t1 MTR_0536s0030 36.129 155 86 2 341 486 194 344 1.17e-27 114
MS.gene99403.t1 MTR_2g083420 25.732 478 276 19 10 474 8 419 3.26e-27 114
MS.gene99403.t1 MTR_2g083380 26.709 468 288 16 10 464 25 450 3.95e-27 114
MS.gene99403.t1 MTR_2g083480 26.304 460 288 16 10 458 8 427 5.14e-27 114
MS.gene99403.t1 MTR_5g004940 33.333 213 112 8 282 493 194 377 1.43e-25 108
MS.gene99403.t1 MTR_2g083390 24.590 488 269 19 10 474 8 419 3.26e-25 108
MS.gene99403.t1 MTR_5g098960 39.264 163 87 4 284 445 259 410 4.66e-25 108
MS.gene99403.t1 MTR_2g083490 25.690 471 289 17 10 464 8 433 7.44e-25 107
MS.gene99403.t1 MTR_6g014186 22.136 515 299 18 5 494 2 439 1.05e-24 106
MS.gene99403.t1 MTR_2086s0010 34.940 166 96 5 307 472 1 154 4.01e-24 99.4
MS.gene99403.t1 MTR_1996s0010 34.940 166 96 5 307 472 1 154 4.01e-24 99.4
MS.gene99403.t1 MTR_7g070995 33.784 148 88 2 355 493 1 147 2.21e-23 96.7
MS.gene99403.t1 MTR_5g072850 32.632 190 100 4 232 419 164 327 4.96e-23 101
MS.gene99403.t1 MTR_6g014185 26.374 273 151 9 225 496 124 347 1.66e-22 99.4
MS.gene99403.t1 MTR_4g059370 29.644 253 149 8 229 475 145 374 5.15e-22 98.2
MS.gene99403.t1 MTR_6g014160 25.581 301 162 14 127 410 102 357 6.99e-22 97.8
MS.gene99403.t1 MTR_4g117970 24.505 404 252 14 85 465 48 421 3.67e-21 96.3
MS.gene99403.t1 MTR_7g080960 28.571 245 106 8 255 496 295 473 4.88e-21 96.3
MS.gene99403.t1 MTR_5g066390 31.792 173 101 5 322 494 60 215 9.82e-21 91.3
MS.gene99403.t1 MTR_6g078320 27.820 266 168 8 227 479 224 478 4.84e-20 93.2
MS.gene99403.t1 MTR_6g013680 21.975 405 216 13 112 494 49 375 6.80e-20 91.7
MS.gene99403.t1 MTR_6g014000 34.307 137 80 4 358 494 30 156 1.28e-19 92.0
MS.gene99403.t1 MTR_1g107325 33.094 139 86 3 357 493 219 352 1.45e-16 81.6
MS.gene99403.t1 MTR_5g090690 23.737 396 226 17 68 452 16 346 3.03e-16 80.9
MS.gene99403.t1 MTR_3g479620 30.675 163 98 5 6 166 2 151 2.49e-15 74.3
MS.gene99403.t1 MTR_1g090280 29.487 156 104 4 307 459 133 285 2.50e-14 74.3
MS.gene99403.t1 MTR_6g013435 31.126 151 97 5 184 332 61 206 4.85e-12 67.4
MS.gene99403.t1 MTR_2g098425 33.824 136 73 5 12 138 14 141 1.95e-11 63.9
MS.gene99403.t1 MTR_0475s0030 31.944 72 45 1 379 450 13 80 9.31e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99403.t1 AT5G12890 42.857 497 258 6 1 490 1 478 9.40e-140 411
MS.gene99403.t1 AT2G36780 33.865 502 293 15 10 496 14 491 2.66e-82 264
MS.gene99403.t1 AT2G36770 33.134 501 296 14 10 495 14 490 5.94e-81 260
MS.gene99403.t1 AT2G36800 33.463 514 299 15 1 496 2 490 5.88e-80 258
MS.gene99403.t1 AT2G36750 33.789 512 297 14 1 496 1 486 1.71e-78 254
MS.gene99403.t1 AT2G15490 32.998 497 294 15 10 493 7 477 8.66e-77 249
MS.gene99403.t1 AT2G15480 32.621 515 300 15 1 493 1 490 4.61e-76 248
MS.gene99403.t1 AT2G15480 33.004 506 300 15 1 493 1 480 5.12e-76 247
MS.gene99403.t1 AT2G15490 32.797 497 298 15 10 493 7 480 5.94e-76 247
MS.gene99403.t1 AT4G34131 32.738 504 297 14 1 490 1 476 7.80e-76 246
MS.gene99403.t1 AT2G36790 33.730 504 291 15 10 496 13 490 1.21e-74 244
MS.gene99403.t1 AT4G34135 32.823 457 269 11 7 448 8 441 3.02e-74 242
MS.gene99403.t1 AT2G36760 32.072 502 300 17 10 493 14 492 1.90e-73 241
MS.gene99403.t1 AT1G73880 30.382 497 299 16 8 496 12 469 4.63e-73 239
MS.gene99403.t1 AT4G34138 31.774 513 288 17 8 495 9 484 2.89e-72 237
MS.gene99403.t1 AT3G53160 32.317 492 291 18 10 483 8 475 1.03e-70 233
MS.gene99403.t1 AT3G53150 31.445 512 309 15 7 495 19 511 6.23e-70 232
MS.gene99403.t1 AT2G16890 31.062 499 293 14 10 495 9 469 2.33e-62 211
MS.gene99403.t1 AT5G03490 30.943 488 291 13 7 491 16 460 5.80e-62 209
MS.gene99403.t1 AT1G10400 29.960 494 298 13 7 490 4 459 1.54e-60 206
MS.gene99403.t1 AT2G16890 32.207 444 254 12 10 440 9 418 3.10e-59 201
MS.gene99403.t1 AT1G22380 30.398 477 281 16 6 463 9 453 5.50e-59 202
MS.gene99403.t1 AT1G51210 30.152 461 274 14 8 465 18 433 2.08e-58 199
MS.gene99403.t1 AT1G22400 30.452 509 297 17 7 494 10 482 2.09e-58 201
MS.gene99403.t1 AT1G22360 30.754 517 296 16 1 494 1 478 1.13e-57 199
MS.gene99403.t1 AT1G22340 29.767 514 294 17 7 494 10 482 6.86e-57 197
MS.gene99403.t1 AT5G14860 28.516 512 298 17 10 495 8 477 1.08e-55 194
MS.gene99403.t1 AT1G22360 30.174 517 287 16 1 494 1 466 4.28e-53 186
MS.gene99403.t1 AT1G05680 28.921 491 292 17 10 490 6 449 4.79e-53 186
MS.gene99403.t1 AT4G01070 29.572 514 270 17 7 486 5 460 7.85e-52 183
MS.gene99403.t1 AT1G22370 29.938 481 299 13 2 472 5 457 2.57e-51 182
MS.gene99403.t1 AT1G05675 28.601 486 300 15 10 490 6 449 9.24e-51 179
MS.gene99403.t1 AT5G66690 29.854 479 271 19 8 464 5 440 1.60e-50 179
MS.gene99403.t1 AT2G31790 27.902 491 305 13 7 490 5 453 1.65e-50 179
MS.gene99403.t1 AT2G36970 27.219 507 294 17 1 479 1 460 5.60e-50 178
MS.gene99403.t1 AT1G06000 29.000 500 275 20 1 490 1 430 9.82e-50 176
MS.gene99403.t1 AT2G18560 39.286 280 138 9 217 481 106 368 1.27e-49 174
MS.gene99403.t1 AT5G26310 29.461 482 269 18 8 464 5 440 3.85e-49 176
MS.gene99403.t1 AT1G01420 27.545 501 296 16 9 488 7 461 4.63e-49 176
MS.gene99403.t1 AT1G01420 27.545 501 296 16 9 488 10 464 5.00e-49 176
MS.gene99403.t1 AT2G31750 28.968 504 301 20 1 495 1 456 5.39e-49 175
MS.gene99403.t1 AT3G50740 29.880 502 248 21 8 464 5 447 1.05e-48 175
MS.gene99403.t1 AT2G31750 28.968 504 301 20 1 495 1 456 1.23e-48 174
MS.gene99403.t1 AT4G36770 27.495 491 274 16 11 471 7 445 4.66e-48 172
MS.gene99403.t1 AT5G65550 30.388 464 271 17 5 453 2 428 1.05e-47 171
MS.gene99403.t1 AT5G49690 29.747 474 275 17 1 462 1 428 1.33e-46 168
MS.gene99403.t1 AT5G59580 28.343 501 284 19 8 493 7 447 1.61e-46 168
MS.gene99403.t1 AT5G59590 28.880 509 286 23 1 493 1 449 1.70e-46 168
MS.gene99403.t1 AT2G18570 37.918 269 140 7 225 481 205 458 1.96e-46 168
MS.gene99403.t1 AT1G01390 29.508 488 274 16 1 464 1 442 2.11e-46 168
MS.gene99403.t1 AT2G29730 28.231 503 301 18 11 496 6 465 2.62e-46 168
MS.gene99403.t1 AT1G01390 29.508 488 274 16 1 464 18 459 2.71e-46 168
MS.gene99403.t1 AT5G38040 27.642 492 280 17 18 493 18 449 1.55e-45 165
MS.gene99403.t1 AT3G46690 28.373 504 291 16 1 491 1 447 1.99e-45 165
MS.gene99403.t1 AT1G78270 27.907 473 302 13 4 463 7 453 2.25e-45 166
MS.gene99403.t1 AT3G46680 29.234 496 292 20 3 490 2 446 2.66e-45 165
MS.gene99403.t1 AT1G24100 30.664 512 282 21 1 493 1 458 5.57e-45 164
MS.gene99403.t1 AT1G07250 28.317 505 295 22 7 484 3 467 2.74e-44 162
MS.gene99403.t1 AT3G46670 28.205 507 279 21 6 490 2 445 3.35e-44 162
MS.gene99403.t1 AT3G46660 28.150 508 289 20 6 493 7 458 4.27e-44 162
MS.gene99403.t1 AT2G29710 28.261 506 301 21 7 494 2 463 1.97e-43 160
MS.gene99403.t1 AT1G07260 29.159 511 286 20 11 490 7 472 3.72e-43 159
MS.gene99403.t1 AT2G30140 27.621 496 289 17 10 493 13 450 9.39e-43 158
MS.gene99403.t1 AT2G43820 27.071 495 301 17 7 493 4 446 1.17e-42 157
MS.gene99403.t1 AT2G30140 27.545 501 284 18 10 493 13 451 1.65e-42 157
MS.gene99403.t1 AT1G05530 27.364 497 307 20 8 494 3 455 6.66e-42 155
MS.gene99403.t1 AT5G38010 27.606 518 285 19 1 493 1 453 9.25e-42 155
MS.gene99403.t1 AT3G46700 27.767 497 298 18 1 491 1 442 1.69e-41 154
MS.gene99403.t1 AT2G30150 26.087 506 292 15 10 496 13 455 4.95e-41 153
MS.gene99403.t1 AT2G28080 26.667 465 278 17 15 452 23 451 9.89e-41 153
MS.gene99403.t1 AT3G11340 26.916 509 290 19 3 494 2 445 1.10e-40 152
MS.gene99403.t1 AT1G05560 26.747 501 315 17 2 493 44 501 3.93e-40 152
MS.gene99403.t1 AT3G16520 32.653 245 151 5 225 466 209 442 4.17e-40 150
MS.gene99403.t1 AT4G34135 30.029 343 216 7 7 340 8 335 4.59e-40 147
MS.gene99403.t1 AT2G43840 27.505 509 279 19 8 493 5 446 5.01e-40 150
MS.gene99403.t1 AT3G16520 32.653 245 151 5 225 466 209 442 5.34e-40 150
MS.gene99403.t1 AT2G43840 27.505 509 279 19 8 493 5 446 5.82e-40 150
MS.gene99403.t1 AT3G16520 32.653 245 151 5 225 466 209 442 6.36e-40 150
MS.gene99403.t1 AT3G46720 29.423 503 282 20 1 493 1 440 1.01e-39 149
MS.gene99403.t1 AT1G05560 26.477 491 312 16 9 493 4 451 1.16e-39 149
MS.gene99403.t1 AT3G21790 25.486 514 328 15 8 496 2 485 1.19e-39 150
MS.gene99403.t1 AT2G29740 27.559 508 305 19 6 490 4 471 1.90e-39 149
MS.gene99403.t1 AT2G30150 25.948 501 289 15 15 496 2 439 3.10e-39 148
MS.gene99403.t1 AT3G55700 26.482 506 299 14 7 496 5 453 1.72e-38 146
MS.gene99403.t1 AT2G29750 25.769 520 308 18 6 495 4 475 1.73e-38 147
MS.gene99403.t1 AT3G02100 25.210 476 292 12 8 466 11 439 2.78e-37 143
MS.gene99403.t1 AT3G46650 26.000 500 298 15 1 493 1 435 3.00e-37 142
MS.gene99403.t1 AT1G07240 34.409 279 154 9 225 494 218 476 3.29e-37 143
MS.gene99403.t1 AT5G54010 28.745 494 297 19 8 493 4 450 4.85e-37 142
MS.gene99403.t1 AT4G15260 30.565 301 177 9 208 493 75 358 8.69e-37 139
MS.gene99403.t1 AT5G05860 25.651 499 298 19 10 494 9 448 1.11e-36 141
MS.gene99403.t1 AT3G21780 29.716 387 225 11 131 493 109 472 1.23e-36 141
MS.gene99403.t1 AT4G15280 25.000 516 317 16 8 495 2 475 2.52e-36 140
MS.gene99403.t1 AT3G55710 27.451 510 289 15 7 494 5 455 2.67e-36 140
MS.gene99403.t1 AT4G15280 25.000 516 317 16 8 495 34 507 2.78e-36 141
MS.gene99403.t1 AT5G05880 26.613 496 297 21 10 493 8 448 6.02e-36 139
MS.gene99403.t1 AT3G21800 27.079 517 296 21 11 493 6 475 3.56e-35 137
MS.gene99403.t1 AT1G64910 27.959 490 289 17 10 493 6 437 3.98e-35 137
MS.gene99403.t1 AT2G23260 26.562 512 298 23 1 493 1 453 5.27e-35 136
MS.gene99403.t1 AT2G26480 25.447 503 309 15 1 494 1 446 9.35e-35 135
MS.gene99403.t1 AT4G27570 27.333 450 275 14 8 451 5 408 2.01e-34 135
MS.gene99403.t1 AT1G22370 31.507 292 181 6 183 472 13 287 2.21e-34 131
MS.gene99403.t1 AT5G05870 27.586 377 226 14 130 493 112 454 2.23e-34 135
MS.gene99403.t1 AT2G22590 26.552 467 299 16 8 464 13 445 4.16e-33 131
MS.gene99403.t1 AT4G15480 25.610 492 326 19 10 493 19 478 4.38e-33 131
MS.gene99403.t1 AT4G27560 27.333 450 275 15 8 451 5 408 4.41e-33 131
MS.gene99403.t1 AT3G21760 25.239 523 314 19 8 493 2 484 2.85e-32 129
MS.gene99403.t1 AT3G21750 23.404 517 319 15 8 495 2 470 3.03e-32 129
MS.gene99403.t1 AT5G05900 25.498 502 294 20 10 493 8 447 3.67e-32 128
MS.gene99403.t1 AT3G29630 28.571 455 259 19 8 450 4 404 4.52e-32 128
MS.gene99403.t1 AT5G05890 24.351 501 306 15 10 493 8 452 4.72e-32 128
MS.gene99403.t1 AT5G17050 26.772 508 296 22 7 494 9 460 1.16e-31 127
MS.gene99403.t1 AT4G15550 26.482 506 301 19 9 490 12 470 1.80e-31 127
MS.gene99403.t1 AT1G30530 26.969 508 290 25 7 496 9 453 2.06e-31 126
MS.gene99403.t1 AT2G23250 24.691 486 310 18 13 493 1 435 9.72e-31 124
MS.gene99403.t1 AT4G15500 23.541 497 332 17 9 496 8 465 4.83e-30 122
MS.gene99403.t1 AT1G64920 26.559 497 297 18 7 493 3 441 4.86e-30 122
MS.gene99403.t1 AT5G37950 28.493 365 193 14 68 403 13 338 1.14e-29 119
MS.gene99403.t1 AT4G14090 25.309 486 298 16 5 476 8 442 1.25e-29 121
MS.gene99403.t1 AT5G17030 36.410 195 104 6 284 476 266 442 3.16e-29 120
MS.gene99403.t1 AT4G15490 24.699 498 324 20 10 494 8 467 4.10e-29 120
MS.gene99403.t1 AT5G53990 26.358 497 294 20 10 496 6 440 4.24e-29 119
MS.gene99403.t1 AT5G37950 28.000 375 196 14 64 403 9 344 9.19e-29 117
MS.gene99403.t1 AT3G29630 27.912 455 236 20 8 450 4 378 7.11e-28 115
MS.gene99403.t1 AT2G16890 28.395 324 199 8 10 323 9 309 3.00e-27 112
MS.gene99403.t1 AT2G16890 28.395 324 199 8 10 323 9 309 3.00e-27 112
MS.gene99403.t1 AT4G09500 27.594 453 269 16 6 451 2 402 3.63e-27 114
MS.gene99403.t1 AT3G21560 23.935 493 336 16 9 493 11 472 3.92e-27 114
MS.gene99403.t1 AT1G50580 26.682 446 275 12 8 449 4 401 1.26e-26 112
MS.gene99403.t1 AT5G54060 25.904 498 311 20 11 496 14 465 1.77e-26 112
MS.gene99403.t1 AT5G17040 31.163 215 124 7 284 496 148 340 5.63e-25 106
MS.gene99403.t1 AT5G17040 31.163 215 124 7 284 496 250 442 9.81e-25 107
MS.gene99403.t1 AT2G22930 27.412 456 258 18 10 451 6 402 2.22e-24 105
MS.gene99403.t1 AT4G09500 26.667 465 233 17 6 451 2 377 1.14e-22 100
MS.gene99403.t1 AT3G22250 31.073 177 107 3 284 459 273 435 1.16e-22 100
MS.gene99403.t1 AT4G01070 26.683 401 197 15 7 369 5 346 8.67e-20 91.3
MS.gene99403.t1 AT2G15490 30.570 193 116 6 10 193 7 190 1.68e-19 89.0

Find 106 sgRNAs with CRISPR-Local

Find 126 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCCATCAACTACATTAA+AGG 0.165297 5.1:+69047798 MS.gene99403:CDS
AGAGAATGAAGCATAGTAAA+AGG 0.190308 5.1:+69048082 MS.gene99403:CDS
CTTTGGCTTATATATCTATT+TGG 0.201361 5.1:+69047428 MS.gene99403:CDS
AAACAAATTCTGATGAGTTT+TGG 0.209089 5.1:+69047470 MS.gene99403:CDS
TTCACTACTTGTGGTGCTTA+TGG 0.229278 5.1:+69047403 MS.gene99403:CDS
AGCCAAGGGGTGCCAATTAT+TGG 0.237967 5.1:+69048210 MS.gene99403:CDS
CCTTTCAATCATAGTCAATA+TGG 0.245363 5.1:+69047169 MS.gene99403:CDS
GGGGTTTGTTGGTGCATAAA+TGG 0.250281 5.1:+69048103 MS.gene99403:CDS
AGAACCTTATATTTGCAAAA+TGG 0.271626 5.1:-69048499 None:intergenic
TCTGTGCTTTACATTTCTTT+TGG 0.272218 5.1:+69047907 MS.gene99403:CDS
TGTTGGATATTGCAGATTTA+AGG 0.277079 5.1:-69047099 None:intergenic
CAACTTCCTGTTTGGTGTGT+TGG 0.293531 5.1:+69047769 MS.gene99403:CDS
ACATCTGATATAATACAAAT+TGG 0.302473 5.1:-69047325 None:intergenic
GAGAATGAAGCATAGTAAAA+GGG 0.315728 5.1:+69048083 MS.gene99403:CDS
GCGAGTGGCCAACCAATAAT+TGG 0.317479 5.1:-69048222 None:intergenic
TTCTCTGTGTTCTCTATGTT+TGG 0.322059 5.1:-69047199 None:intergenic
GAACCCTTTAATGTAGTTGA+TGG 0.345250 5.1:-69047802 None:intergenic
GATTGAGATATCATTGTTAG+AGG 0.346027 5.1:-69047131 None:intergenic
TTGTGGATGGAATTCTGTTT+TGG 0.364388 5.1:+69048179 MS.gene99403:CDS
GTTGAGGAGATTGAGACATT+AGG 0.368040 5.1:+69047721 MS.gene99403:CDS
CTTCCATCAACTACATTAAA+GGG 0.370069 5.1:+69047799 MS.gene99403:CDS
GGGTTTGTTGGTGCATAAAT+GGG 0.378424 5.1:+69048104 MS.gene99403:CDS
TTGAGGAGATTGAGACATTA+GGG 0.385826 5.1:+69047722 MS.gene99403:CDS
ACTATCTTCAACTTCCTGTT+TGG 0.396628 5.1:+69047761 MS.gene99403:CDS
ACCAATGTTGCAAAGAGTTT+AGG 0.398649 5.1:+69047364 MS.gene99403:CDS
ATTCTCTCTTCAAAACCTTC+TGG 0.399444 5.1:-69048066 None:intergenic
AAAGATGTTGGTGGAAGAAA+TGG 0.402195 5.1:+69048266 MS.gene99403:CDS
CATAGTGATGACACCATTCA+TGG 0.404967 5.1:+69046973 MS.gene99403:CDS
AATAGAGAAAGGTGAAGAAA+AGG 0.413934 5.1:+69048440 MS.gene99403:CDS
TGTGGAAACTGTGATTTCTA+AGG 0.418827 5.1:+69048314 MS.gene99403:CDS
GCATAGTAAAAGGGGTTTGT+TGG 0.418981 5.1:+69048092 MS.gene99403:CDS
TGGGTTATTAGGCCACCTTT+TGG 0.429078 5.1:+69048006 MS.gene99403:CDS
TGACATTAATGCAGAGTTCA+AGG 0.433210 5.1:+69048032 MS.gene99403:CDS
AGAGGACCAACACACCAAAC+AGG 0.444461 5.1:-69047775 None:intergenic
TTTCAATGAATTCTGATGGA+TGG 0.462562 5.1:+69047686 MS.gene99403:CDS
AAGATGTTGGTGGAAGAAAT+GGG 0.464038 5.1:+69048267 MS.gene99403:CDS
AGGAAAGGGAAAAGAGATGA+AGG 0.466069 5.1:+69048377 MS.gene99403:CDS
AAGAGCTAAGAGGAGTTTCA+AGG 0.471920 5.1:-69047267 None:intergenic
ATCAAAGATCACACAACAAG+AGG 0.472717 5.1:+69047294 MS.gene99403:CDS
AATAAGTGCTTCACAAATGA+TGG 0.472776 5.1:+69047942 MS.gene99403:CDS
TTTCTAGCTAATGCTAGGAA+TGG 0.473385 5.1:-69047013 None:intergenic
TTGTGGTGCTTATGGAACTT+TGG 0.474827 5.1:+69047411 MS.gene99403:CDS
TCTGTGTTCTCTATGTTTGG+TGG 0.481332 5.1:-69047196 None:intergenic
GCATTCTTCAAGAGCTATGC+CGG 0.481619 5.1:-69047854 None:intergenic
GAAGATCATAGAAATAGTTA+TGG 0.482278 5.1:+69048347 MS.gene99403:CDS
GCATAAATGGGGACCTCAGT+TGG 0.485337 5.1:+69048116 MS.gene99403:CDS
GCACTTTCAATGAATTCTGA+TGG 0.490599 5.1:+69047682 MS.gene99403:CDS
ATTCTGTCACACAAATCAAC+AGG 0.492773 5.1:+69048141 MS.gene99403:CDS
TTTAAGGTGCTGAATGTTGA+GGG 0.493079 5.1:-69047083 None:intergenic
ATAGAGAAAGGTGAAGAAAA+GGG 0.497514 5.1:+69048441 MS.gene99403:CDS
ATTGAAAGTGCTATCTGTGT+AGG 0.500998 5.1:-69047670 None:intergenic
TATCGTGCCGGAAAAGAATC+CGG 0.505155 5.1:+69047835 MS.gene99403:CDS
AACCAATAATTGGCACCCCT+TGG 0.506995 5.1:-69048212 None:intergenic
AGAATGAAGCATAGTAAAAG+GGG 0.508786 5.1:+69048084 MS.gene99403:CDS
GCCTAAACTCTTTGCAACAT+TGG 0.509297 5.1:-69047365 None:intergenic
CAAATGATGGCATTGGCTGA+AGG 0.509427 5.1:+69047955 MS.gene99403:CDS
TTTGATATTAAAGAGCTAAG+AGG 0.511656 5.1:-69047277 None:intergenic
GTGCTGAATGTTGAGGGGAG+TGG 0.516394 5.1:-69047077 None:intergenic
TTGCAAAGAGTTTAGGCACT+AGG 0.517139 5.1:+69047371 MS.gene99403:CDS
CCATATTGACTATGATTGAA+AGG 0.524338 5.1:-69047169 None:intergenic
AGCATACAATGCAAAGATGT+TGG 0.525745 5.1:+69048254 MS.gene99403:CDS
GATGGCATTGGCTGAAGGGT+TGG 0.527119 5.1:+69047960 MS.gene99403:CDS
GCATTAATGTCAAAACCAAA+AGG 0.529138 5.1:-69048021 None:intergenic
AGTTATGGATCAAGAAGGAA+AGG 0.531800 5.1:+69048362 MS.gene99403:CDS
CAGCTGATGGAACTGATAGT+TGG 0.533405 5.1:+69047635 MS.gene99403:CDS
CATTTCTAAGTCATTGTGGA+TGG 0.533477 5.1:+69048166 MS.gene99403:CDS
AGAGAGGCAACAATAGAGAA+AGG 0.537343 5.1:+69048429 MS.gene99403:CDS
ATGCAGAGTTCAAGGCAGAA+TGG 0.538105 5.1:+69048040 MS.gene99403:CDS
CTGAATGTTGAGGGGAGTGG+TGG 0.543214 5.1:-69047074 None:intergenic
GGGCTCTTCATTGAGAGCAA+TGG 0.546445 5.1:+69048461 MS.gene99403:CDS
GTTAGAGGAAGAAAATGTGT+TGG 0.559529 5.1:-69047116 None:intergenic
TTGAAAGTGCTATCTGTGTA+GGG 0.561400 5.1:-69047669 None:intergenic
AAGGGGTGCCAATTATTGGT+TGG 0.565048 5.1:+69048214 MS.gene99403:CDS
AATATATCATTCACTACTTG+TGG 0.569451 5.1:+69047394 MS.gene99403:CDS
CCTTTAATGTAGTTGATGGA+AGG 0.574557 5.1:-69047798 None:intergenic
TCTGATATAATACAAATTGG+AGG 0.576021 5.1:-69047322 None:intergenic
ATTTAAGGTGCTGAATGTTG+AGG 0.577240 5.1:-69047084 None:intergenic
AGATGTTGGTGGAAGAAATG+GGG 0.579042 5.1:+69048268 MS.gene99403:CDS
CATAGCTCTTGAAGAATGCA+TGG 0.580876 5.1:+69047858 MS.gene99403:CDS
GAAATAGTTATGGATCAAGA+AGG 0.581158 5.1:+69048357 MS.gene99403:CDS
AAATGATGGCATTGGCTGAA+GGG 0.582808 5.1:+69047956 MS.gene99403:CDS
TCAAATTCAAAGTATCGTGC+CGG 0.583474 5.1:+69047823 MS.gene99403:CDS
GGTTTGTTGGTGCATAAATG+GGG 0.589872 5.1:+69048105 MS.gene99403:CDS
AGATATCTAAGAGCAGCTGA+TGG 0.590168 5.1:+69047622 MS.gene99403:CDS
TGCTTCACAAATGATGGCAT+TGG 0.592228 5.1:+69047948 MS.gene99403:CDS
AGATGACCATGTGCCATGAA+TGG 0.594468 5.1:-69046986 None:intergenic
AAGGCAGAATGGTTACCAGA+AGG 0.597416 5.1:+69048051 MS.gene99403:CDS
ATCTATGCATCTGAGAGATG+TGG 0.598533 5.1:-69047603 None:intergenic
AATGTAGTTGATGGAAGGAG+AGG 0.600382 5.1:-69047793 None:intergenic
GTTATGGATCAAGAAGGAAA+GGG 0.601148 5.1:+69048363 MS.gene99403:CDS
GGAGCATTTCTAAGTCATTG+TGG 0.609955 5.1:+69048162 MS.gene99403:CDS
AGTTTGATTATATCAGCTAG+AGG 0.618867 5.1:-69047226 None:intergenic
TCAAAGATCACACAACAAGA+GGG 0.619274 5.1:+69047295 MS.gene99403:CDS
GATGTTGGTGGAAGAAATGG+GGG 0.621093 5.1:+69048269 MS.gene99403:CDS
TATGCTTGTTCTGCTGCGAG+TGG 0.621269 5.1:-69048237 None:intergenic
TTTGGAGAGTCTTAGCCAAG+GGG 0.622624 5.1:+69048197 MS.gene99403:CDS
ATACAATGCAAAGATGTTGG+TGG 0.623747 5.1:+69048257 MS.gene99403:CDS
GATTGCAGTGCACATGAGAG+AGG 0.634469 5.1:+69048413 MS.gene99403:CDS
TTAAGGTGCTGAATGTTGAG+GGG 0.636731 5.1:-69047082 None:intergenic
TGTGACAGAATCTCCAACTG+AGG 0.639031 5.1:-69048129 None:intergenic
CTCTTGAAGAATGCATGGAG+TGG 0.645200 5.1:+69047863 MS.gene99403:CDS
ATGGATTTGTAACACTGTTG+AGG 0.654238 5.1:+69047705 MS.gene99403:CDS
ATGACACCATTCATGGCACA+TGG 0.659660 5.1:+69046980 MS.gene99403:CDS
TTAATGTCAAAACCAAAAGG+TGG 0.668183 5.1:-69048018 None:intergenic
AATGGTGTCATCACTATGTG+TGG 0.687624 5.1:-69046968 None:intergenic
TGTGGAATTGACAAGAACTG+TGG 0.715420 5.1:+69048296 MS.gene99403:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATCTGATATAATACAAAT+TGG - chr5.1:69047328-69047347 None:intergenic 20.0%
!! TAACTTCATATATGATACTA+GGG + chr5.1:69047560-69047579 MS.gene99403:intron 20.0%
!!! ATTATATCAGATGTTTTTCT+TGG + chr5.1:69047334-69047353 MS.gene99403:CDS 20.0%
!!! TTAGTTAGATTTTGTTTTTG+TGG - chr5.1:69047543-69047562 None:intergenic 20.0%
! AATATATCATTCACTACTTG+TGG + chr5.1:69047394-69047413 MS.gene99403:CDS 25.0%
! CTAACTTCATATATGATACT+AGG + chr5.1:69047559-69047578 MS.gene99403:intron 25.0%
! GAAGATCATAGAAATAGTTA+TGG + chr5.1:69048347-69048366 MS.gene99403:CDS 25.0%
! TCTGATATAATACAAATTGG+AGG - chr5.1:69047325-69047344 None:intergenic 25.0%
! TTTGATATTAAAGAGCTAAG+AGG - chr5.1:69047280-69047299 None:intergenic 25.0%
!! AAACAAATTCTGATGAGTTT+TGG + chr5.1:69047470-69047489 MS.gene99403:CDS 25.0%
!! AAAGTGAGAAACTTTTCATT+TGG + chr5.1:69047986-69048005 MS.gene99403:CDS 25.0%
!! AACAAATTCTGATGAGTTTT+GGG + chr5.1:69047471-69047490 MS.gene99403:CDS 25.0%
!! AAGTGAGAAACTTTTCATTT+GGG + chr5.1:69047987-69048006 MS.gene99403:CDS 25.0%
!! CTTTGGCTTATATATCTATT+TGG + chr5.1:69047428-69047447 MS.gene99403:CDS 25.0%
!!! AACTTTTCATTTGGGTTATT+AGG + chr5.1:69047995-69048014 MS.gene99403:CDS 25.0%
!!! TCAGAATTTGTTTTTCTATG+AGG - chr5.1:69047463-69047482 None:intergenic 25.0%
AATAAGTGCTTCACAAATGA+TGG + chr5.1:69047942-69047961 MS.gene99403:CDS 30.0%
AATAGAGAAAGGTGAAGAAA+AGG + chr5.1:69048440-69048459 MS.gene99403:CDS 30.0%
AGAATGAAGCATAGTAAAAG+GGG + chr5.1:69048084-69048103 MS.gene99403:CDS 30.0%
AGAGAATGAAGCATAGTAAA+AGG + chr5.1:69048082-69048101 MS.gene99403:CDS 30.0%
AGTTTGATTATATCAGCTAG+AGG - chr5.1:69047229-69047248 None:intergenic 30.0%
ATAGAGAAAGGTGAAGAAAA+GGG + chr5.1:69048441-69048460 MS.gene99403:CDS 30.0%
CCTTTCAATCATAGTCAATA+TGG + chr5.1:69047169-69047188 MS.gene99403:CDS 30.0%
CTTCCATCAACTACATTAAA+GGG + chr5.1:69047799-69047818 MS.gene99403:CDS 30.0%
GAAATAGTTATGGATCAAGA+AGG + chr5.1:69048357-69048376 MS.gene99403:CDS 30.0%
GAGAATGAAGCATAGTAAAA+GGG + chr5.1:69048083-69048102 MS.gene99403:CDS 30.0%
GATTGAGATATCATTGTTAG+AGG - chr5.1:69047134-69047153 None:intergenic 30.0%
GCATTAATGTCAAAACCAAA+AGG - chr5.1:69048024-69048043 None:intergenic 30.0%
TGTTGGATATTGCAGATTTA+AGG - chr5.1:69047102-69047121 None:intergenic 30.0%
TTAATGTCAAAACCAAAAGG+TGG - chr5.1:69048021-69048040 None:intergenic 30.0%
TTTCAATGAATTCTGATGGA+TGG + chr5.1:69047686-69047705 MS.gene99403:CDS 30.0%
! ATCAGATGTTTTTCTTGGTT+GGG + chr5.1:69047339-69047358 MS.gene99403:CDS 30.0%
! CCATATTGACTATGATTGAA+AGG - chr5.1:69047172-69047191 None:intergenic 30.0%
! TATCAGATGTTTTTCTTGGT+TGG + chr5.1:69047338-69047357 MS.gene99403:CDS 30.0%
! TCTGTGCTTTACATTTCTTT+TGG + chr5.1:69047907-69047926 MS.gene99403:CDS 30.0%
!!! GAATTTTTCTAGCTAATGCT+AGG - chr5.1:69047021-69047040 None:intergenic 30.0%
!!! TGAGATATTTTAGTAGTACC+TGG - chr5.1:69047499-69047518 None:intergenic 30.0%
ACCAATGTTGCAAAGAGTTT+AGG + chr5.1:69047364-69047383 MS.gene99403:CDS 35.0%
ACTATCTTCAACTTCCTGTT+TGG + chr5.1:69047761-69047780 MS.gene99403:CDS 35.0%
AGCATACAATGCAAAGATGT+TGG + chr5.1:69048254-69048273 MS.gene99403:CDS 35.0%
AGTTATGGATCAAGAAGGAA+AGG + chr5.1:69048362-69048381 MS.gene99403:CDS 35.0%
ATACAATGCAAAGATGTTGG+TGG + chr5.1:69048257-69048276 MS.gene99403:CDS 35.0%
ATCAAAGATCACACAACAAG+AGG + chr5.1:69047294-69047313 MS.gene99403:CDS 35.0%
ATGGATTTGTAACACTGTTG+AGG + chr5.1:69047705-69047724 MS.gene99403:CDS 35.0%
ATTCTCTCTTCAAAACCTTC+TGG - chr5.1:69048069-69048088 None:intergenic 35.0%
ATTCTGTCACACAAATCAAC+AGG + chr5.1:69048141-69048160 MS.gene99403:CDS 35.0%
CATTTCTAAGTCATTGTGGA+TGG + chr5.1:69048166-69048185 MS.gene99403:CDS 35.0%
CCTTCCATCAACTACATTAA+AGG + chr5.1:69047798-69047817 MS.gene99403:CDS 35.0%
GAACCCTTTAATGTAGTTGA+TGG - chr5.1:69047805-69047824 None:intergenic 35.0%
GCACTTTCAATGAATTCTGA+TGG + chr5.1:69047682-69047701 MS.gene99403:CDS 35.0%
GTTAGAGGAAGAAAATGTGT+TGG - chr5.1:69047119-69047138 None:intergenic 35.0%
GTTATGGATCAAGAAGGAAA+GGG + chr5.1:69048363-69048382 MS.gene99403:CDS 35.0%
TCAAAGATCACACAACAAGA+GGG + chr5.1:69047295-69047314 MS.gene99403:CDS 35.0%
TGACATTAATGCAGAGTTCA+AGG + chr5.1:69048032-69048051 MS.gene99403:CDS 35.0%
TGTGGAAACTGTGATTTCTA+AGG + chr5.1:69048314-69048333 MS.gene99403:CDS 35.0%
TTCTCTGTGTTCTCTATGTT+TGG - chr5.1:69047202-69047221 None:intergenic 35.0%
TTGAGGAGATTGAGACATTA+GGG + chr5.1:69047722-69047741 MS.gene99403:CDS 35.0%
! AAAGATGTTGGTGGAAGAAA+TGG + chr5.1:69048266-69048285 MS.gene99403:CDS 35.0%
! AAGATGTTGGTGGAAGAAAT+GGG + chr5.1:69048267-69048286 MS.gene99403:CDS 35.0%
! TTGTGGATGGAATTCTGTTT+TGG + chr5.1:69048179-69048198 MS.gene99403:CDS 35.0%
!! ATGTGGAATCTGTAGTTTTG+AGG - chr5.1:69047589-69047608 None:intergenic 35.0%
!! ATTGAAAGTGCTATCTGTGT+AGG - chr5.1:69047673-69047692 None:intergenic 35.0%
!! ATTTAAGGTGCTGAATGTTG+AGG - chr5.1:69047087-69047106 None:intergenic 35.0%
!! CCTTTAATGTAGTTGATGGA+AGG - chr5.1:69047801-69047820 None:intergenic 35.0%
!! TCAAATTCAAAGTATCGTGC+CGG + chr5.1:69047823-69047842 MS.gene99403:CDS 35.0%
!! TTGAAAGTGCTATCTGTGTA+GGG - chr5.1:69047672-69047691 None:intergenic 35.0%
!! TTTAAGGTGCTGAATGTTGA+GGG - chr5.1:69047086-69047105 None:intergenic 35.0%
!! TTTCTAGCTAATGCTAGGAA+TGG - chr5.1:69047016-69047035 None:intergenic 35.0%
!!! TGTGGAATCTGTAGTTTTGA+GGG - chr5.1:69047588-69047607 None:intergenic 35.0%
AAGAGCTAAGAGGAGTTTCA+AGG - chr5.1:69047270-69047289 None:intergenic 40.0%
AGAGAGGCAACAATAGAGAA+AGG + chr5.1:69048429-69048448 MS.gene99403:CDS 40.0%
AGATATCTAAGAGCAGCTGA+TGG + chr5.1:69047622-69047641 MS.gene99403:CDS 40.0%
AGGAAAGGGAAAAGAGATGA+AGG + chr5.1:69048377-69048396 MS.gene99403:CDS 40.0%
ATCTATGCATCTGAGAGATG+TGG - chr5.1:69047606-69047625 None:intergenic 40.0%
CATAGCTCTTGAAGAATGCA+TGG + chr5.1:69047858-69047877 MS.gene99403:CDS 40.0%
CATAGTGATGACACCATTCA+TGG + chr5.1:69046973-69046992 MS.gene99403:CDS 40.0%
GCATAGTAAAAGGGGTTTGT+TGG + chr5.1:69048092-69048111 MS.gene99403:CDS 40.0%
GCCTAAACTCTTTGCAACAT+TGG - chr5.1:69047368-69047387 None:intergenic 40.0%
GTTGAGGAGATTGAGACATT+AGG + chr5.1:69047721-69047740 MS.gene99403:CDS 40.0%
TCTGTGTTCTCTATGTTTGG+TGG - chr5.1:69047199-69047218 None:intergenic 40.0%
TGCTTCACAAATGATGGCAT+TGG + chr5.1:69047948-69047967 MS.gene99403:CDS 40.0%
TGTGGAATTGACAAGAACTG+TGG + chr5.1:69048296-69048315 MS.gene99403:CDS 40.0%
TTCACTACTTGTGGTGCTTA+TGG + chr5.1:69047403-69047422 MS.gene99403:CDS 40.0%
TTGCAAAGAGTTTAGGCACT+AGG + chr5.1:69047371-69047390 MS.gene99403:CDS 40.0%
TTGTGGTGCTTATGGAACTT+TGG + chr5.1:69047411-69047430 MS.gene99403:CDS 40.0%
! AGATGTTGGTGGAAGAAATG+GGG + chr5.1:69048268-69048287 MS.gene99403:CDS 40.0%
! GGAGCATTTCTAAGTCATTG+TGG + chr5.1:69048162-69048181 MS.gene99403:CDS 40.0%
! GGTGGCTATTGTGATTTTGA+AGG - chr5.1:69047059-69047078 None:intergenic 40.0%
!! AAATGATGGCATTGGCTGAA+GGG + chr5.1:69047956-69047975 MS.gene99403:CDS 40.0%
!! AATGGTGTCATCACTATGTG+TGG - chr5.1:69046971-69046990 None:intergenic 40.0%
!! AATGTAGTTGATGGAAGGAG+AGG - chr5.1:69047796-69047815 None:intergenic 40.0%
!! GGGTTTGTTGGTGCATAAAT+GGG + chr5.1:69048104-69048123 MS.gene99403:CDS 40.0%
!! GGTTTGTTGGTGCATAAATG+GGG + chr5.1:69048105-69048124 MS.gene99403:CDS 40.0%
!! TTAAGGTGCTGAATGTTGAG+GGG - chr5.1:69047085-69047104 None:intergenic 40.0%
!! TTTTGGAGAGTCTTAGCCAA+GGG + chr5.1:69048196-69048215 MS.gene99403:CDS 40.0%
AACCAATAATTGGCACCCCT+TGG - chr5.1:69048215-69048234 None:intergenic 45.0%
AAGGCAGAATGGTTACCAGA+AGG + chr5.1:69048051-69048070 MS.gene99403:CDS 45.0%
AGATGACCATGTGCCATGAA+TGG - chr5.1:69046989-69047008 None:intergenic 45.0%
ATGACACCATTCATGGCACA+TGG + chr5.1:69046980-69046999 MS.gene99403:CDS 45.0%
ATGCAGAGTTCAAGGCAGAA+TGG + chr5.1:69048040-69048059 MS.gene99403:CDS 45.0%
CAGCTGATGGAACTGATAGT+TGG + chr5.1:69047635-69047654 MS.gene99403:CDS 45.0%
CTCTTGAAGAATGCATGGAG+TGG + chr5.1:69047863-69047882 MS.gene99403:CDS 45.0%
GCATTCTTCAAGAGCTATGC+CGG - chr5.1:69047857-69047876 None:intergenic 45.0%
TATCGTGCCGGAAAAGAATC+CGG + chr5.1:69047835-69047854 MS.gene99403:CDS 45.0%
TGTGACAGAATCTCCAACTG+AGG - chr5.1:69048132-69048151 None:intergenic 45.0%
TTTGGAGAGTCTTAGCCAAG+GGG + chr5.1:69048197-69048216 MS.gene99403:CDS 45.0%
! AGCTATGCCGGATTCTTTTC+CGG - chr5.1:69047845-69047864 None:intergenic 45.0%
! GATGTTGGTGGAAGAAATGG+GGG + chr5.1:69048269-69048288 MS.gene99403:CDS 45.0%
! TGGGTTATTAGGCCACCTTT+TGG + chr5.1:69048006-69048025 MS.gene99403:CDS 45.0%
!! AAGGGGTGCCAATTATTGGT+TGG + chr5.1:69048214-69048233 MS.gene99403:CDS 45.0%
!! CAAATGATGGCATTGGCTGA+AGG + chr5.1:69047955-69047974 MS.gene99403:CDS 45.0%
!! CAACTTCCTGTTTGGTGTGT+TGG + chr5.1:69047769-69047788 MS.gene99403:CDS 45.0%
!! GGGGTTTGTTGGTGCATAAA+TGG + chr5.1:69048103-69048122 MS.gene99403:CDS 45.0%
!!! GTTTTGGAGAGTCTTAGCCA+AGG + chr5.1:69048195-69048214 MS.gene99403:CDS 45.0%
!!! TCTGATGAGTTTTGGGTTCC+AGG + chr5.1:69047478-69047497 MS.gene99403:CDS 45.0%
AGAGGACCAACACACCAAAC+AGG - chr5.1:69047778-69047797 None:intergenic 50.0%
GATTGCAGTGCACATGAGAG+AGG + chr5.1:69048413-69048432 MS.gene99403:CDS 50.0%
GCATAAATGGGGACCTCAGT+TGG + chr5.1:69048116-69048135 MS.gene99403:CDS 50.0%
GCGAGTGGCCAACCAATAAT+TGG - chr5.1:69048225-69048244 None:intergenic 50.0%
GGGCTCTTCATTGAGAGCAA+TGG + chr5.1:69048461-69048480 MS.gene99403:CDS 50.0%
TATGCTTGTTCTGCTGCGAG+TGG - chr5.1:69048240-69048259 None:intergenic 50.0%
!! AGCCAAGGGGTGCCAATTAT+TGG + chr5.1:69048210-69048229 MS.gene99403:CDS 50.0%
CTGAATGTTGAGGGGAGTGG+TGG - chr5.1:69047077-69047096 None:intergenic 55.0%
GGAAGAAATGGGGGTGAGTG+TGG + chr5.1:69048278-69048297 MS.gene99403:CDS 55.0%
GTGCTGAATGTTGAGGGGAG+TGG - chr5.1:69047080-69047099 None:intergenic 55.0%
!! GATGGCATTGGCTGAAGGGT+TGG + chr5.1:69047960-69047979 MS.gene99403:CDS 55.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 69046944 69048515 69046944 ID=MS.gene99403
chr5.1 mRNA 69046944 69048515 69046944 ID=MS.gene99403.t1;Parent=MS.gene99403
chr5.1 exon 69046944 69047499 69046944 ID=MS.gene99403.t1.exon1;Parent=MS.gene99403.t1
chr5.1 CDS 69046944 69047499 69046944 ID=cds.MS.gene99403.t1;Parent=MS.gene99403.t1
chr5.1 exon 69047581 69048515 69047581 ID=MS.gene99403.t1.exon2;Parent=MS.gene99403.t1
chr5.1 CDS 69047581 69048515 69047581 ID=cds.MS.gene99403.t1;Parent=MS.gene99403.t1
Gene Sequence

>MS.gene99403

ATGGCAGAAACTGCAGAGAAGAAACCACACATAGTGATGACACCATTCATGGCACATGGTCATCTCATTCCATTCCTAGCATTAGCTAGAAAAATTCAAGAAACAACTACTACCTTCAAAATCACAATAGCCACCACTCCCCTCAACATTCAGCACCTTAAATCTGCAATATCCAACACATTTTCTTCCTCTAACAATGATATCTCAATCAATCTTGCTGAATTACCTTTCAATCATAGTCAATATGGTTTACCACCAAACATAGAGAACACAGAGAAGCTTCCTCTAGCTGATATAATCAAACTCTTTCAAGCATCAACTAGCCTTGAAACTCCTCTTAGCTCTTTAATATCAAAGATCACACAACAAGAGGGTCAACCTCCAATTTGTATTATATCAGATGTTTTTCTTGGTTGGGTTACCAATGTTGCAAAGAGTTTAGGCACTAGGAATATATCATTCACTACTTGTGGTGCTTATGGAACTTTGGCTTATATATCTATTTGGTGTAATCTACCTCATAGAAAAACAAATTCTGATGAGTTTTGGGTTCCAGGTACTACTAAAATATCTCATTTATAGTTATGTTTTGTTCACCACAAAAACAAAATCTAACTAACTTCATATATGATACTAGGGTTCCCTCAAAACTACAGATTCCACATCTCTCAGATGCATAGATATCTAAGAGCAGCTGATGGAACTGATAGTTGGTCAAAATTCTTCCCTACACAGATAGCACTTTCAATGAATTCTGATGGATGGATTTGTAACACTGTTGAGGAGATTGAGACATTAGGGCTGCAACTATTGAAGAACTATCTTCAACTTCCTGTTTGGTGTGTTGGTCCTCTCCTTCCATCAACTACATTAAAGGGTTCAAATTCAAAGTATCGTGCCGGAAAAGAATCCGGCATAGCTCTTGAAGAATGCATGGAGTGGCTTGATTTGAAAGATGAGAATTCTGTGCTTTACATTTCTTTTGGATCACAGAACACAATAAGTGCTTCACAAATGATGGCATTGGCTGAAGGGTTGGAAGAAAGTGAGAAACTTTTCATTTGGGTTATTAGGCCACCTTTTGGTTTTGACATTAATGCAGAGTTCAAGGCAGAATGGTTACCAGAAGGTTTTGAAGAGAGAATGAAGCATAGTAAAAGGGGTTTGTTGGTGCATAAATGGGGACCTCAGTTGGAGATTCTGTCACACAAATCAACAGGAGCATTTCTAAGTCATTGTGGATGGAATTCTGTTTTGGAGAGTCTTAGCCAAGGGGTGCCAATTATTGGTTGGCCACTCGCAGCAGAACAAGCATACAATGCAAAGATGTTGGTGGAAGAAATGGGGGTGAGTGTGGAATTGACAAGAACTGTGGAAACTGTGATTTCTAAGGAAGATGTGAAGAAGATCATAGAAATAGTTATGGATCAAGAAGGAAAGGGAAAAGAGATGAAGGAGAAAGCAAATGAGATTGCAGTGCACATGAGAGAGGCAACAATAGAGAAAGGTGAAGAAAAGGGCTCTTCATTGAGAGCAATGGATGATTTTGTCAGAACCATTTTGCAAATATAA
Protein sequence

>MS.gene99403.t1

MAETAEKKPHIVMTPFMAHGHLIPFLALARKIQETTTTFKITIATTPLNIQHLKSAISNTFSSSNNDISINLAELPFNHSQYGLPPNIENTEKLPLADIIKLFQASTSLETPLSSLISKITQQEGQPPICIISDVFLGWVTNVAKSLGTRNISFTTCGAYGTLAYISIWCNLPHRKTNSDEFWVPGFPQNYRFHISQMHRYLRAADGTDSWSKFFPTQIALSMNSDGWICNTVEEIETLGLQLLKNYLQLPVWCVGPLLPSTTLKGSNSKYRAGKESGIALEECMEWLDLKDENSVLYISFGSQNTISASQMMALAEGLEESEKLFIWVIRPPFGFDINAEFKAEWLPEGFEERMKHSKRGLLVHKWGPQLEILSHKSTGAFLSHCGWNSVLESLSQGVPIIGWPLAAEQAYNAKMLVEEMGVSVELTRTVETVISKEDVKKIIEIVMDQEGKGKEMKEKANEIAVHMREATIEKGEEKGSSLRAMDDFVRTILQI