AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016622.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016622.01.T01 MTR_7g105080 100.000 128 0 0 1 128 1 128 1.34e-92 263
MsG0380016622.01.T01 MTR_3g092130 100.000 128 0 0 1 128 1 128 1.34e-92 263
MsG0380016622.01.T01 MTR_1g059690 100.000 128 0 0 1 128 1 128 1.34e-92 263
MsG0380016622.01.T01 MTR_3g092130 98.361 122 2 0 1 122 1 122 2.95e-87 250
MsG0380016622.01.T01 MTR_5g092700 100.000 76 0 0 1 76 1 76 9.76e-50 155
MsG0380016622.01.T01 MTR_5g092700 62.162 74 28 0 3 76 79 152 1.91e-26 96.7
MsG0380016622.01.T01 MTR_4g073580 100.000 76 0 0 1 76 1 76 9.76e-50 155
MsG0380016622.01.T01 MTR_4g073580 62.162 74 28 0 3 76 79 152 1.91e-26 96.7
MsG0380016622.01.T01 MTR_8g088060 100.000 76 0 0 1 76 1 76 1.51e-49 155
MsG0380016622.01.T01 MTR_5g033960 100.000 76 0 0 1 76 1 76 1.61e-49 155
MsG0380016622.01.T01 MTR_4g073580 100.000 76 0 0 1 76 1 76 3.70e-49 155
MsG0380016622.01.T01 MTR_4g073580 44.231 104 28 1 3 76 79 182 6.53e-20 80.9
MsG0380016622.01.T01 MTR_4g088485 98.701 77 1 0 1 77 1 77 4.38e-49 156
MsG0380016622.01.T01 MTR_4g088485 98.701 77 1 0 1 77 138 214 5.75e-49 155
MsG0380016622.01.T01 MTR_4g088485 79.221 77 1 1 1 77 77 138 3.63e-34 118
MsG0380016622.01.T01 MTR_7g116360 98.701 77 1 0 1 77 1 77 4.92e-49 156
MsG0380016622.01.T01 MTR_7g116360 98.701 77 1 0 1 77 77 153 4.92e-49 156
MsG0380016622.01.T01 MTR_7g116360 98.701 77 1 0 1 77 153 229 6.61e-49 156
MsG0380016622.01.T01 MTR_1g066390 98.701 77 1 0 1 77 1 77 5.76e-49 156
MsG0380016622.01.T01 MTR_1g066390 98.701 77 1 0 1 77 77 153 5.76e-49 156
MsG0380016622.01.T01 MTR_1g066390 100.000 76 0 0 1 76 153 228 8.81e-49 156
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 1 77 1.32e-48 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 77 153 1.32e-48 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 153 229 1.32e-48 157
MsG0380016622.01.T01 MTR_4g080920 97.403 77 2 0 1 77 77 153 1.45e-48 155
MsG0380016622.01.T01 MTR_4g080920 97.403 77 2 0 1 77 1 77 2.66e-48 154
MsG0380016622.01.T01 MTR_4g080920 69.737 76 23 0 1 76 153 228 5.97e-30 107
MsG0380016622.01.T01 MTR_6g061930 98.701 77 1 0 1 77 1 77 2.84e-48 156
MsG0380016622.01.T01 MTR_6g061930 98.701 77 1 0 1 77 77 153 2.84e-48 156
MsG0380016622.01.T01 MTR_6g061930 98.701 77 1 0 1 77 214 290 3.76e-48 156
MsG0380016622.01.T01 MTR_6g061930 76.623 77 3 1 1 77 153 214 1.30e-31 113
MsG0380016622.01.T01 MTR_7g116360 98.701 77 1 0 1 77 49 125 3.18e-48 156
MsG0380016622.01.T01 MTR_7g116360 98.701 77 1 0 1 77 125 201 3.18e-48 156
MsG0380016622.01.T01 MTR_7g116360 98.701 77 1 0 1 77 201 277 4.12e-48 155
MsG0380016622.01.T01 MTR_4g081010 98.701 77 1 0 1 77 1 77 3.32e-48 157
MsG0380016622.01.T01 MTR_4g081010 98.701 77 1 0 1 77 77 153 3.32e-48 157
MsG0380016622.01.T01 MTR_4g081010 98.701 77 1 0 1 77 153 229 3.32e-48 157
MsG0380016622.01.T01 MTR_4g081010 100.000 76 0 0 1 76 229 304 5.00e-48 156
MsG0380016622.01.T01 MTR_4g081010 98.701 77 1 0 1 77 1 77 5.09e-48 155
MsG0380016622.01.T01 MTR_4g081010 98.701 77 1 0 1 77 77 153 5.09e-48 155
MsG0380016622.01.T01 MTR_4g081010 98.701 77 1 0 1 77 153 229 5.09e-48 155
MsG0380016622.01.T01 MTR_8g081020 98.701 77 1 0 1 77 1 77 1.83e-47 157
MsG0380016622.01.T01 MTR_8g081020 98.701 77 1 0 1 77 77 153 1.83e-47 157
MsG0380016622.01.T01 MTR_8g081020 98.701 77 1 0 1 77 153 229 1.83e-47 157
MsG0380016622.01.T01 MTR_8g081020 98.701 77 1 0 1 77 229 305 1.83e-47 157
MsG0380016622.01.T01 MTR_8g081020 100.000 76 0 0 1 76 305 380 2.75e-47 156
MsG0380016622.01.T01 MTR_4g081010 98.701 77 1 0 1 77 1 77 1.85e-47 157
MsG0380016622.01.T01 MTR_4g081010 98.701 77 1 0 1 77 77 153 1.85e-47 157
MsG0380016622.01.T01 MTR_4g081010 98.701 77 1 0 1 77 153 229 1.85e-47 157
MsG0380016622.01.T01 MTR_4g081010 98.701 77 1 0 1 77 229 305 1.85e-47 157
MsG0380016622.01.T01 MTR_4g081010 100.000 76 0 0 1 76 305 380 2.78e-47 156
MsG0380016622.01.T01 MTR_4g080797 98.701 77 1 0 1 77 1 77 1.89e-47 157
MsG0380016622.01.T01 MTR_4g080797 98.701 77 1 0 1 77 77 153 1.89e-47 157
MsG0380016622.01.T01 MTR_4g080797 98.701 77 1 0 1 77 153 229 1.89e-47 157
MsG0380016622.01.T01 MTR_4g080797 98.701 77 1 0 1 77 229 305 1.89e-47 157
MsG0380016622.01.T01 MTR_4g080797 98.701 77 1 0 1 77 305 381 2.56e-47 156
MsG0380016622.01.T01 MTR_4g091580 98.701 77 1 0 1 77 1 77 1.89e-47 157
MsG0380016622.01.T01 MTR_4g091580 98.701 77 1 0 1 77 77 153 1.89e-47 157
MsG0380016622.01.T01 MTR_4g091580 98.701 77 1 0 1 77 153 229 1.89e-47 157
MsG0380016622.01.T01 MTR_4g091580 98.701 77 1 0 1 77 305 381 2.56e-47 156
MsG0380016622.01.T01 MTR_4g091580 97.403 77 2 0 1 77 229 305 5.64e-47 155
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 1 77 1.89e-47 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 77 153 1.89e-47 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 153 229 1.89e-47 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 229 305 1.89e-47 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 305 381 2.56e-47 156
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 1 77 7.94e-47 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 77 153 7.94e-47 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 153 229 7.94e-47 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 229 305 7.94e-47 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 305 381 7.94e-47 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 381 457 1.07e-46 156
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 1 77 7.94e-47 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 77 153 7.94e-47 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 153 229 7.94e-47 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 229 305 7.94e-47 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 305 381 7.94e-47 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 381 457 1.07e-46 156
MsG0380016622.01.T01 MTR_4g081010 98.701 77 1 0 1 77 1 77 2.54e-46 157
MsG0380016622.01.T01 MTR_4g081010 98.701 77 1 0 1 77 77 153 2.54e-46 157
MsG0380016622.01.T01 MTR_4g081010 98.701 77 1 0 1 77 153 229 2.54e-46 157
MsG0380016622.01.T01 MTR_4g081010 98.701 77 1 0 1 77 229 305 2.54e-46 157
MsG0380016622.01.T01 MTR_4g081010 98.701 77 1 0 1 77 305 381 2.54e-46 157
MsG0380016622.01.T01 MTR_4g081010 98.701 77 1 0 1 77 381 457 2.54e-46 157
MsG0380016622.01.T01 MTR_4g081010 100.000 76 0 0 1 76 457 532 3.77e-46 156
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 1 77 2.62e-46 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 77 153 2.62e-46 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 153 229 2.62e-46 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 229 305 2.62e-46 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 305 381 2.62e-46 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 381 457 2.62e-46 157
MsG0380016622.01.T01 MTR_8g018230 98.701 77 1 0 1 77 457 533 3.51e-46 156
MsG0380016622.01.T01 MTR_4g091580 98.701 77 1 0 1 77 1 77 2.76e-46 157
MsG0380016622.01.T01 MTR_4g091580 98.701 77 1 0 1 77 77 153 2.76e-46 157
MsG0380016622.01.T01 MTR_4g091580 98.701 77 1 0 1 77 153 229 2.76e-46 157
MsG0380016622.01.T01 MTR_4g091580 98.701 77 1 0 1 77 229 305 2.76e-46 157
MsG0380016622.01.T01 MTR_4g091580 98.701 77 1 0 1 77 381 457 2.76e-46 157
MsG0380016622.01.T01 MTR_4g091580 98.701 77 1 0 1 77 457 533 3.69e-46 156
MsG0380016622.01.T01 MTR_4g091580 96.104 77 3 0 1 77 305 381 1.04e-44 152
MsG0380016622.01.T01 MTR_8g479250 96.104 77 3 0 1 77 141 217 1.13e-45 150
MsG0380016622.01.T01 MTR_8g479250 76.389 72 6 1 1 72 217 277 7.08e-27 101
MsG0380016622.01.T01 MTR_8g479250 100.000 41 0 0 1 41 1 41 1.26e-20 85.1
MsG0380016622.01.T01 MTR_8g479250 91.429 35 3 0 43 77 107 141 1.15e-14 68.9
MsG0380016622.01.T01 MTR_4g088495 98.701 77 1 0 1 77 77 153 2.25e-45 157
MsG0380016622.01.T01 MTR_4g088495 98.701 77 1 0 1 77 153 229 2.25e-45 157
MsG0380016622.01.T01 MTR_4g088495 98.701 77 1 0 1 77 229 305 2.25e-45 157
MsG0380016622.01.T01 MTR_4g088495 98.701 77 1 0 1 77 305 381 2.25e-45 157
MsG0380016622.01.T01 MTR_4g088495 98.701 77 1 0 1 77 381 457 2.25e-45 157
MsG0380016622.01.T01 MTR_4g088495 98.701 77 1 0 1 77 457 533 2.25e-45 157
MsG0380016622.01.T01 MTR_4g088495 98.701 77 1 0 1 77 533 609 2.25e-45 157
MsG0380016622.01.T01 MTR_4g088495 98.701 77 1 0 1 77 609 685 2.25e-45 157
MsG0380016622.01.T01 MTR_4g088495 98.701 77 1 0 1 77 685 761 2.25e-45 157
MsG0380016622.01.T01 MTR_4g088495 98.701 77 1 0 1 77 761 837 2.99e-45 156
MsG0380016622.01.T01 MTR_4g088495 97.403 77 2 0 1 77 1 77 5.15e-44 153
MsG0380016622.01.T01 MTR_1g046640 71.053 76 22 0 1 76 240 315 3.12e-28 105
MsG0380016622.01.T01 MTR_5g076810 68.831 77 23 1 1 76 194 270 1.13e-27 103
MsG0380016622.01.T01 MTR_5g076660 69.863 73 22 0 1 73 266 338 8.93e-27 102
MsG0380016622.01.T01 MTR_5g067400 68.421 76 24 0 1 76 241 316 1.80e-25 98.2
MsG0380016622.01.T01 MTR_5g061310 60.000 75 30 0 1 75 2 76 5.15e-25 90.9
MsG0380016622.01.T01 MTR_5g076370 64.384 73 26 0 1 73 267 339 3.97e-23 92.4
MsG0380016622.01.T01 MTR_2g038430 61.333 75 29 0 1 75 268 342 5.77e-23 92.0
MsG0380016622.01.T01 MTR_5g076505 61.333 75 29 0 1 75 240 314 8.32e-23 90.9
MsG0380016622.01.T01 MTR_1g046650 57.895 76 32 0 1 76 171 246 3.56e-22 88.2
MsG0380016622.01.T01 MTR_1g046650 57.895 76 32 0 1 76 240 315 5.06e-22 89.0
MsG0380016622.01.T01 MTR_5g076720 65.333 75 26 0 1 75 315 389 6.47e-22 89.4
MsG0380016622.01.T01 MTR_1g046650 57.895 76 32 0 1 76 240 315 7.20e-22 88.6
MsG0380016622.01.T01 MTR_1g046650 57.895 76 32 0 1 76 271 346 9.84e-22 88.6
MsG0380016622.01.T01 MTR_5g076740 59.211 76 30 1 1 75 86 161 1.16e-21 84.7
MsG0380016622.01.T01 MTR_2g038420 60.000 75 30 0 1 75 260 334 1.40e-21 88.2
MsG0380016622.01.T01 MTR_7g094390 58.667 75 31 0 1 75 402 476 9.24e-21 86.7
MsG0380016622.01.T01 MTR_5g076520 57.333 75 31 1 1 74 244 318 3.54e-19 81.3
MsG0380016622.01.T01 MTR_7g024290 60.526 76 29 1 1 75 241 316 9.30e-19 80.1
MsG0380016622.01.T01 MTR_4g009980 55.224 67 30 0 9 75 4 70 5.23e-18 72.8
MsG0380016622.01.T01 MTR_5g061290 53.333 75 35 0 1 75 252 326 7.18e-18 77.8
MsG0380016622.01.T01 MTR_5g079360 70.213 47 14 0 50 96 9 55 4.68e-17 70.1
MsG0380016622.01.T01 MTR_5g076350 48.684 76 38 1 1 75 8 83 1.20e-15 67.4
MsG0380016622.01.T01 MTR_5g076760 59.649 57 23 0 11 67 5 61 4.61e-15 65.9
MsG0380016622.01.T01 MTR_5g076780 58.333 60 25 0 15 74 4 63 5.84e-15 65.1
MsG0380016622.01.T01 MTR_5g076340 50.649 77 36 2 1 75 9 85 1.27e-14 64.7
MsG0380016622.01.T01 MTR_4g080783 76.471 34 8 0 44 77 7 40 6.98e-12 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016622.01.T01 AT3G52590 98.438 128 2 0 1 128 1 128 4.98e-91 259
MsG0380016622.01.T01 AT2G36170 98.438 128 2 0 1 128 1 128 4.98e-91 259
MsG0380016622.01.T01 AT4G05050 98.701 77 1 0 1 77 1 77 5.79e-50 156
MsG0380016622.01.T01 AT4G05050 98.701 77 1 0 1 77 77 153 7.61e-50 156
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 1 77 5.79e-50 156
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 77 153 7.61e-50 156
MsG0380016622.01.T01 AT2G35635 100.000 76 0 0 1 76 1 76 1.02e-49 155
MsG0380016622.01.T01 AT2G35635 60.526 76 30 0 3 78 79 154 2.07e-26 96.7
MsG0380016622.01.T01 AT2G47110 100.000 76 0 0 1 76 1 76 1.54e-49 155
MsG0380016622.01.T01 AT2G47110 100.000 76 0 0 1 76 1 76 1.54e-49 155
MsG0380016622.01.T01 AT1G31340 100.000 76 0 0 1 76 1 76 1.57e-49 155
MsG0380016622.01.T01 AT1G31340 62.667 75 28 0 3 77 79 153 5.34e-27 98.6
MsG0380016622.01.T01 AT3G62250 100.000 76 0 0 1 76 1 76 1.77e-49 155
MsG0380016622.01.T01 AT1G23410 100.000 76 0 0 1 76 1 76 1.77e-49 155
MsG0380016622.01.T01 AT4G05050 98.701 77 1 0 1 77 1 77 5.16e-49 156
MsG0380016622.01.T01 AT4G05050 98.701 77 1 0 1 77 77 153 5.16e-49 156
MsG0380016622.01.T01 AT4G05050 98.701 77 1 0 1 77 153 229 6.92e-49 156
MsG0380016622.01.T01 AT4G05050 98.701 77 1 0 1 77 1 77 5.16e-49 156
MsG0380016622.01.T01 AT4G05050 98.701 77 1 0 1 77 77 153 5.16e-49 156
MsG0380016622.01.T01 AT4G05050 98.701 77 1 0 1 77 153 229 6.92e-49 156
MsG0380016622.01.T01 AT4G05050 98.701 77 1 0 1 77 1 77 5.16e-49 156
MsG0380016622.01.T01 AT4G05050 98.701 77 1 0 1 77 77 153 5.16e-49 156
MsG0380016622.01.T01 AT4G05050 98.701 77 1 0 1 77 153 229 6.92e-49 156
MsG0380016622.01.T01 AT4G02890 98.701 77 1 0 1 77 1 77 5.16e-49 156
MsG0380016622.01.T01 AT4G02890 98.701 77 1 0 1 77 77 153 5.16e-49 156
MsG0380016622.01.T01 AT4G02890 98.701 77 1 0 1 77 153 229 6.92e-49 156
MsG0380016622.01.T01 AT4G02890 98.701 77 1 0 1 77 1 77 5.16e-49 156
MsG0380016622.01.T01 AT4G02890 98.701 77 1 0 1 77 77 153 5.16e-49 156
MsG0380016622.01.T01 AT4G02890 98.701 77 1 0 1 77 153 229 6.92e-49 156
MsG0380016622.01.T01 AT1G55060 97.403 77 2 0 1 77 77 153 1.98e-48 155
MsG0380016622.01.T01 AT1G55060 97.368 76 2 0 1 76 153 228 2.55e-46 149
MsG0380016622.01.T01 AT1G55060 85.714 77 11 0 1 77 1 77 2.39e-42 139
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 1 77 3.47e-48 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 77 153 3.47e-48 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 153 229 3.47e-48 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 229 305 4.65e-48 156
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 1 77 3.47e-48 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 77 153 3.47e-48 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 153 229 3.47e-48 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 229 305 4.65e-48 156
MsG0380016622.01.T01 AT4G02890 98.701 77 1 0 1 77 1 77 3.47e-48 157
MsG0380016622.01.T01 AT4G02890 98.701 77 1 0 1 77 77 153 3.47e-48 157
MsG0380016622.01.T01 AT4G02890 98.701 77 1 0 1 77 153 229 3.47e-48 157
MsG0380016622.01.T01 AT4G02890 98.701 77 1 0 1 77 229 305 4.65e-48 156
MsG0380016622.01.T01 AT4G02890 98.701 77 1 0 1 77 1 77 3.47e-48 157
MsG0380016622.01.T01 AT4G02890 98.701 77 1 0 1 77 77 153 3.47e-48 157
MsG0380016622.01.T01 AT4G02890 98.701 77 1 0 1 77 153 229 3.47e-48 157
MsG0380016622.01.T01 AT4G02890 98.701 77 1 0 1 77 229 305 4.65e-48 156
MsG0380016622.01.T01 AT5G03240 98.701 77 1 0 1 77 1 77 3.64e-48 156
MsG0380016622.01.T01 AT5G03240 98.701 77 1 0 1 77 77 153 3.64e-48 156
MsG0380016622.01.T01 AT5G03240 98.701 77 1 0 1 77 153 229 3.64e-48 156
MsG0380016622.01.T01 AT5G03240 100.000 76 0 0 1 76 229 304 5.49e-48 156
MsG0380016622.01.T01 AT5G03240 98.701 77 1 0 1 77 1 77 3.64e-48 156
MsG0380016622.01.T01 AT5G03240 98.701 77 1 0 1 77 77 153 3.64e-48 156
MsG0380016622.01.T01 AT5G03240 98.701 77 1 0 1 77 153 229 3.64e-48 156
MsG0380016622.01.T01 AT5G03240 100.000 76 0 0 1 76 229 304 5.49e-48 156
MsG0380016622.01.T01 AT5G03240 98.701 77 1 0 1 77 1 77 3.64e-48 156
MsG0380016622.01.T01 AT5G03240 98.701 77 1 0 1 77 77 153 3.64e-48 156
MsG0380016622.01.T01 AT5G03240 98.701 77 1 0 1 77 153 229 3.64e-48 156
MsG0380016622.01.T01 AT5G03240 100.000 76 0 0 1 76 229 304 5.49e-48 156
MsG0380016622.01.T01 AT5G20620 98.701 77 1 0 1 77 1 77 3.64e-48 156
MsG0380016622.01.T01 AT5G20620 98.701 77 1 0 1 77 77 153 3.64e-48 156
MsG0380016622.01.T01 AT5G20620 98.701 77 1 0 1 77 153 229 3.64e-48 156
MsG0380016622.01.T01 AT5G20620 100.000 76 0 0 1 76 229 304 5.49e-48 156
MsG0380016622.01.T01 AT1G65350 98.701 77 1 0 1 77 1 77 6.37e-48 156
MsG0380016622.01.T01 AT1G65350 97.403 77 2 0 1 77 152 228 9.63e-47 153
MsG0380016622.01.T01 AT1G65350 97.403 77 1 1 1 77 77 152 7.13e-45 148
MsG0380016622.01.T01 AT1G65350 80.000 90 4 1 1 76 228 317 6.28e-39 133
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 1 77 1.98e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 77 153 1.98e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 153 229 1.98e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 229 305 1.98e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 305 381 2.68e-47 156
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 1 77 1.98e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 77 153 1.98e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 153 229 1.98e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 229 305 1.98e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 305 381 2.68e-47 156
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 1 77 1.98e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 77 153 1.98e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 153 229 1.98e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 229 305 1.98e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 305 381 2.68e-47 156
MsG0380016622.01.T01 AT5G20620 98.701 77 1 0 1 77 1 77 2.05e-47 157
MsG0380016622.01.T01 AT5G20620 98.701 77 1 0 1 77 77 153 2.05e-47 157
MsG0380016622.01.T01 AT5G20620 98.701 77 1 0 1 77 153 229 2.05e-47 157
MsG0380016622.01.T01 AT5G20620 98.701 77 1 0 1 77 229 305 2.05e-47 157
MsG0380016622.01.T01 AT5G20620 100.000 76 0 0 1 76 305 380 3.08e-47 156
MsG0380016622.01.T01 AT5G37640 96.104 77 3 0 1 77 79 155 4.82e-47 154
MsG0380016622.01.T01 AT5G37640 92.208 77 6 0 1 77 155 231 7.20e-43 143
MsG0380016622.01.T01 AT5G37640 92.208 77 5 1 1 76 231 307 8.69e-41 138
MsG0380016622.01.T01 AT5G37640 77.922 77 17 0 1 77 3 79 5.19e-34 120
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 1 77 8.31e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 77 153 8.31e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 153 229 8.31e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 229 305 8.31e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 305 381 8.31e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 381 457 1.12e-46 156
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 1 77 8.31e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 77 153 8.31e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 153 229 8.31e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 229 305 8.31e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 305 381 8.31e-47 157
MsG0380016622.01.T01 AT4G05320 98.701 77 1 0 1 77 381 457 1.12e-46 156
MsG0380016622.01.T01 AT3G09790 92.208 77 6 0 1 77 79 155 3.52e-40 141
MsG0380016622.01.T01 AT3G09790 84.416 77 12 0 1 77 3 79 9.49e-37 132
MsG0380016622.01.T01 AT3G09790 79.730 74 15 0 1 74 552 625 2.28e-31 117
MsG0380016622.01.T01 AT3G09790 70.130 77 23 0 1 77 393 469 1.38e-28 109
MsG0380016622.01.T01 AT3G09790 73.684 76 18 1 1 74 319 394 3.39e-27 105
MsG0380016622.01.T01 AT3G09790 69.512 82 20 1 1 77 238 319 7.55e-27 104
MsG0380016622.01.T01 AT3G09790 67.073 82 20 2 1 75 155 236 3.77e-26 102
MsG0380016622.01.T01 AT3G09790 65.476 84 22 1 1 77 469 552 2.67e-25 100
MsG0380016622.01.T01 AT3G09790 92.208 77 6 0 1 77 79 155 3.52e-40 141
MsG0380016622.01.T01 AT3G09790 84.416 77 12 0 1 77 3 79 9.49e-37 132
MsG0380016622.01.T01 AT3G09790 79.730 74 15 0 1 74 552 625 2.28e-31 117
MsG0380016622.01.T01 AT3G09790 70.130 77 23 0 1 77 393 469 1.38e-28 109
MsG0380016622.01.T01 AT3G09790 73.684 76 18 1 1 74 319 394 3.39e-27 105
MsG0380016622.01.T01 AT3G09790 69.512 82 20 1 1 77 238 319 7.55e-27 104
MsG0380016622.01.T01 AT3G09790 67.073 82 20 2 1 75 155 236 3.77e-26 102
MsG0380016622.01.T01 AT3G09790 65.476 84 22 1 1 77 469 552 2.67e-25 100
MsG0380016622.01.T01 AT1G53930 75.342 73 18 0 1 73 86 158 6.64e-33 113
MsG0380016622.01.T01 AT1G53950 61.972 71 27 0 1 71 69 139 2.82e-25 93.6
MsG0380016622.01.T01 AT1G11980 55.263 76 34 0 1 76 1 76 2.91e-24 89.0
MsG0380016622.01.T01 AT1G53945 46.269 67 36 0 1 67 46 112 7.62e-13 61.2
MsG0380016622.01.T01 AT4G12570 38.667 75 45 1 1 74 95 169 4.34e-12 62.4
MsG0380016622.01.T01 AT5G42220 38.889 72 44 0 1 72 24 95 6.27e-12 61.6
MsG0380016622.01.T01 AT5G42220 38.889 72 44 0 1 72 24 95 6.27e-12 61.6

Find 36 sgRNAs with CRISPR-Local

Find 145 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTCAGATATTAACCTTTC+TGG 0.099691 3:-85817899 None:intergenic
TCCATCTTCCAACTGCTTTC+CGG 0.264402 3:-85817853 None:intergenic
GTCTACTTGATCTTCTTCTT+TGG 0.282397 3:-85819661 None:intergenic
CTTATCCTGGTTATACTTCC+TGG 0.288777 3:-85818100 None:intergenic
AAGATCAACCTCTGCTGGTC+CGG 0.328982 3:-85817828 None:intergenic
CTCAAGGGTGATAGTCTTGC+CGG 0.357525 3:-85817646 None:intergenic
AATCATTGAGCCTTCTTTGA+TGG 0.363914 3:+85818071 MsG0380016622.01.T01:CDS
CAACGTCAAAGCTAAGATTC+AGG 0.397707 3:+85817692 MsG0380016622.01.T01:CDS
AGATCAACCTCTGCTGGTCC+GGG 0.424083 3:-85817827 None:intergenic
CTTCTTTGATGGCGTTGGCC+AGG 0.452976 3:+85818082 MsG0380016622.01.T01:CDS
CGGCGAAGATCAACCTCTGC+TGG 0.466798 3:-85817833 None:intergenic
TGAGCCTTCTTTGATGGCGT+TGG 0.490761 3:+85818077 MsG0380016622.01.T01:CDS
CTGGCCAACGCCATCAAAGA+AGG 0.492085 3:-85818081 None:intergenic
TGCGGCAGATAGTCTTATCC+TGG 0.502333 3:-85818113 None:intergenic
GCCGGAAAGCAGTTGGAAGA+TGG 0.509801 3:+85817852 MsG0380016622.01.T01:CDS
TTCCTGCAGTTGACAGCACG+AGG 0.524526 3:-85819510 None:intergenic
GGTGATAGTCTTGCCGGTGA+GGG 0.538859 3:-85817640 None:intergenic
GCTAAGATTCAGGATAAAGA+AGG 0.540669 3:+85817702 MsG0380016622.01.T01:CDS
CAGCAGAGGTTGATCTTCGC+CGG 0.541092 3:+85817834 MsG0380016622.01.T01:CDS
ACCCTCGTGCTGTCAACTGC+AGG 0.545009 3:+85819508 MsG0380016622.01.T01:CDS
GATCTTCGCCGGAAAGCAGT+TGG 0.546373 3:+85817845 MsG0380016622.01.T01:CDS
GGGTGATAGTCTTGCCGGTG+AGG 0.566343 3:-85817641 None:intergenic
CTGGATGTTGTAGTCAGCAA+GGG 0.569635 3:-85817880 None:intergenic
TGTCGCTTGACTCCACCTCA+AGG 0.574617 3:-85817662 None:intergenic
ATCAACCTCTGCTGGTCCGG+GGG 0.575505 3:-85817825 None:intergenic
ATCTTCGTGAAAACCCTCAC+CGG 0.581247 3:+85817627 MsG0380016622.01.T01:CDS
TCTGGATGTTGTAGTCAGCA+AGG 0.585018 3:-85817881 None:intergenic
GTTGGCCAGGAAGTATAACC+AGG 0.589917 3:+85818095 MsG0380016622.01.T01:CDS
GATCAACCTCTGCTGGTCCG+GGG 0.600001 3:-85817826 None:intergenic
CAAGACTATCACCCTTGAGG+TGG 0.603784 3:+85817650 MsG0380016622.01.T01:CDS
CAATTGTTTAGGAATTCCCC+CGG 0.609118 3:+85817809 MsG0380016622.01.T01:intron
GTCGCTTGACTCCACCTCAA+GGG 0.609137 3:-85817661 None:intergenic
GCTGACTACAACATCCAGAA+AGG 0.625044 3:+85817885 MsG0380016622.01.T01:CDS
GAAGTGCGGACACAGCAACC+AGG 0.663806 3:+85819536 MsG0380016622.01.T01:CDS
CGGCAAGACTATCACCCTTG+AGG 0.665715 3:+85817647 MsG0380016622.01.T01:CDS
TCCTGCAGTTGACAGCACGA+GGG 0.675676 3:-85819509 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTATTATTTAGTCTTAA+TGG + Chr3:85819611-85819630 MsG0380016622.01.T01:intron 10.0%
!!! AGTAAAATAATCTCTTTTTA+TGG - Chr3:85819115-85819134 None:intergenic 15.0%
!!! ATAAAAAGAGATTATTTTAC+TGG + Chr3:85819114-85819133 MsG0380016622.01.T01:intron 15.0%
!! AAAATAATAGTAATTGCCTA+GGG + Chr3:85819279-85819298 MsG0380016622.01.T01:intron 20.0%
!! AAAGGAAAAAGAGAAAAAAA+TGG - Chr3:85817753-85817772 None:intergenic 20.0%
!! AAATAGTTAATATATGGGAT+AGG + Chr3:85818671-85818690 MsG0380016622.01.T01:intron 20.0%
!! AATCATCTGAATGTTTAAAA+AGG + Chr3:85818407-85818426 MsG0380016622.01.T01:intron 20.0%
!! ACTTCTGATTACATTAAATT+AGG + Chr3:85818960-85818979 MsG0380016622.01.T01:intron 20.0%
!! ATCCCATATATTAACTATTT+GGG - Chr3:85818671-85818690 None:intergenic 20.0%
!! CAGAATAATACAATATAACT+AGG - Chr3:85819364-85819383 None:intergenic 20.0%
!! TATAAATAGAATTTCTGTCT+TGG - Chr3:85818608-85818627 None:intergenic 20.0%
!! TATCCCATATATTAACTATT+TGG - Chr3:85818672-85818691 None:intergenic 20.0%
!! TTATAATTGCCATCTATTAT+TGG + Chr3:85819405-85819424 MsG0380016622.01.T01:intron 20.0%
!!! CCAAGGTATTTAAATATAAA+AGG - Chr3:85818787-85818806 None:intergenic 20.0%
!!! CCTTTTATATTTAAATACCT+TGG + Chr3:85818784-85818803 MsG0380016622.01.T01:intron 20.0%
!!! GGTTTTATGTTAAAATAGTT+AGG + Chr3:85818475-85818494 MsG0380016622.01.T01:intron 20.0%
!!! TAATAAAAACTTGCTTCATT+TGG - Chr3:85818539-85818558 None:intergenic 20.0%
!!! TATAAAAGGTATTGTTATCA+CGG - Chr3:85818773-85818792 None:intergenic 20.0%
!!! TTAAAAAGGTTACTTTTCTT+TGG + Chr3:85818421-85818440 MsG0380016622.01.T01:intron 20.0%
! AAAAGAGAAAAAAATGGATC+TGG - Chr3:85817747-85817766 None:intergenic 25.0%
! AAATAATAGTAATTGCCTAG+GGG + Chr3:85819280-85819299 MsG0380016622.01.T01:intron 25.0%
! AACACTTTAGACTTTAGTTA+AGG + Chr3:85818299-85818318 MsG0380016622.01.T01:intron 25.0%
! AATTCAGATATTAACCTTTC+TGG - Chr3:85817902-85817921 None:intergenic 25.0%
! AGACCCAAATAGTTAATATA+TGG + Chr3:85818665-85818684 MsG0380016622.01.T01:intron 25.0%
! ATAGTATCACATAAGATGTA+GGG - Chr3:85819334-85819353 None:intergenic 25.0%
! ATCAAACAAAAACGAATCAA+AGG - Chr3:85817771-85817790 None:intergenic 25.0%
! CAAAATAATAGTAATTGCCT+AGG + Chr3:85819278-85819297 MsG0380016622.01.T01:intron 25.0%
! GACCCAAATAGTTAATATAT+GGG + Chr3:85818666-85818685 MsG0380016622.01.T01:intron 25.0%
! TATAGTATCACATAAGATGT+AGG - Chr3:85819335-85819354 None:intergenic 25.0%
! TTTCTCTCTTTCAATTGTTT+AGG + Chr3:85817798-85817817 MsG0380016622.01.T01:intron 25.0%
!! ATTTTGCAAATGAATACCTT+TGG - Chr3:85819264-85819283 None:intergenic 25.0%
!! TTTAATGTAATCAGAAGTGT+CGG - Chr3:85818958-85818977 None:intergenic 25.0%
!!! TATTTTTTGTATTGCAGTTG+AGG + Chr3:85819638-85819657 MsG0380016622.01.T01:intron 25.0%
AAGATTTCATTCAATACGAC+AGG - Chr3:85819583-85819602 None:intergenic 30.0%
AATAATAGTAATTGCCTAGG+GGG + Chr3:85819281-85819300 MsG0380016622.01.T01:intron 30.0%
ACAATTATAAGTAAGCACAC+TGG - Chr3:85819462-85819481 None:intergenic 30.0%
GATGGCAATTATAATTCAAG+TGG - Chr3:85819399-85819418 None:intergenic 30.0%
GATTCATACACTATGAAGTA+TGG - Chr3:85819050-85819069 None:intergenic 30.0%
TGCAATAAGTGCAAATTCAT+AGG + Chr3:85818454-85818473 MsG0380016622.01.T01:intron 30.0%
TTAGACTTTAGTTAAGGTTC+AGG + Chr3:85818305-85818324 MsG0380016622.01.T01:intron 30.0%
! AATGATGGTTTTCTTCAGTT+TGG + Chr3:85818714-85818733 MsG0380016622.01.T01:intron 30.0%
! AGTTCATACATCTGTTGTTT+CGG - Chr3:85818861-85818880 None:intergenic 30.0%
! ATTAATGTTTGAAACCTGTC+TGG + Chr3:85819144-85819163 MsG0380016622.01.T01:intron 30.0%
! GTCGACAACAATAAGATTTT+GGG - Chr3:85818993-85819012 None:intergenic 30.0%
! TTGTGTTATTGGTATTGGAT+TGG + Chr3:85818159-85818178 MsG0380016622.01.T01:intron 30.0%
!!! ACACATGATTTTGAAACCAA+AGG + Chr3:85819245-85819264 MsG0380016622.01.T01:intron 30.0%
!!! TCAGGTTGTACATTTTTTTG+AGG + Chr3:85818323-85818342 MsG0380016622.01.T01:intron 30.0%
AATCATTGAGCCTTCTTTGA+TGG + Chr3:85818071-85818090 MsG0380016622.01.T01:CDS 35.0%
AATGACTGTTGTCTGAATTG+GGG + Chr3:85817984-85818003 MsG0380016622.01.T01:intron 35.0%
AGATTGTGCAAACTTACTTG+CGG - Chr3:85818134-85818153 None:intergenic 35.0%
CACATCTTCGTTCAAACAAT+TGG + Chr3:85819069-85819088 MsG0380016622.01.T01:intron 35.0%
GAATGACTGTTGTCTGAATT+GGG + Chr3:85817983-85818002 MsG0380016622.01.T01:intron 35.0%
GAGCACTAAAATCATGTCAA+AGG - Chr3:85818367-85818386 None:intergenic 35.0%
GCAAAATATCAACACAACCA+AGG - Chr3:85818804-85818823 None:intergenic 35.0%
GCTAAGATTCAGGATAAAGA+AGG + Chr3:85817702-85817721 MsG0380016622.01.T01:CDS 35.0%
TACTTATAATTGTGCTGTGC+AGG + Chr3:85819469-85819488 MsG0380016622.01.T01:intron 35.0%
TGAATGACTGTTGTCTGAAT+TGG + Chr3:85817982-85818001 MsG0380016622.01.T01:intron 35.0%
TGGATCTGGTTATTTGAGTA+AGG - Chr3:85817733-85817752 None:intergenic 35.0%
TTGCCATCTATTATTGGAAG+CGG + Chr3:85819411-85819430 MsG0380016622.01.T01:intron 35.0%
! CGTCGACAACAATAAGATTT+TGG - Chr3:85818994-85819013 None:intergenic 35.0%
! GAAAACCATCATTTTCGAAG+AGG - Chr3:85818707-85818726 None:intergenic 35.0%
!! ACTATTTGGGTCTTGTTAAC+CGG - Chr3:85818658-85818677 None:intergenic 35.0%
!! GGTTGTGTTGATATTTTGCT+GGG + Chr3:85818805-85818824 MsG0380016622.01.T01:intron 35.0%
!! TGGTTGTGTTGATATTTTGC+TGG + Chr3:85818804-85818823 MsG0380016622.01.T01:intron 35.0%
!!! CAACTTTGCATCTTGTTTTG+AGG + Chr3:85818037-85818056 MsG0380016622.01.T01:CDS 35.0%
!!! TGGAACAGTTTTAAGACAGT+TGG - Chr3:85819095-85819114 None:intergenic 35.0%
AACTGCAGGAAAAAGAAGTG+CGG + Chr3:85819522-85819541 MsG0380016622.01.T01:CDS 40.0%
AAGTGATAGAACACTGTACC+TGG - Chr3:85819557-85819576 None:intergenic 40.0%
CAACGTCAAAGCTAAGATTC+AGG + Chr3:85817692-85817711 MsG0380016622.01.T01:CDS 40.0%
CAATTGTTTAGGAATTCCCC+CGG + Chr3:85817809-85817828 MsG0380016622.01.T01:intron 40.0%
CACAAAATCTCAATCCAGAC+AGG - Chr3:85819161-85819180 None:intergenic 40.0%
CACACGTAAGCAGATATCTA+AGG - Chr3:85819215-85819234 None:intergenic 40.0%
CTTATCCTGGTTATACTTCC+TGG - Chr3:85818103-85818122 None:intergenic 40.0%
GCAAGTAAGTTTGCACAATC+TGG + Chr3:85818133-85818152 MsG0380016622.01.T01:intron 40.0%
TGCCATCTATTATTGGAAGC+GGG + Chr3:85819412-85819431 MsG0380016622.01.T01:intron 40.0%
TTGGCATGGCATACACTTAT+AGG + Chr3:85818733-85818752 MsG0380016622.01.T01:intron 40.0%
! GGCTCTTGTGTTATTGGTAT+TGG + Chr3:85818154-85818173 MsG0380016622.01.T01:intron 40.0%
! TGGTTTTCTTCAGTTTGGCA+TGG + Chr3:85818719-85818738 MsG0380016622.01.T01:intron 40.0%
! TTTTCCTACAGTTGTCAACG+AGG - Chr3:85818389-85818408 None:intergenic 40.0%
!! CAATCTGGCTCTTGTGTTAT+TGG + Chr3:85818148-85818167 MsG0380016622.01.T01:intron 40.0%
ATCTTCGTGAAAACCCTCAC+CGG + Chr3:85817627-85817646 MsG0380016622.01.T01:CDS 45.0%
ATTCGTGTCAATGTCGTGTC+TGG + Chr3:85819015-85819034 MsG0380016622.01.T01:intron 45.0%
CACAGCCTCTTCGAAAATGA+TGG + Chr3:85818699-85818718 MsG0380016622.01.T01:intron 45.0%
CTGGATGTTGTAGTCAGCAA+GGG - Chr3:85817883-85817902 None:intergenic 45.0%
GCCATCTATTATTGGAAGCG+GGG + Chr3:85819413-85819432 MsG0380016622.01.T01:intron 45.0%
GCTGACTACAACATCCAGAA+AGG + Chr3:85817885-85817904 MsG0380016622.01.T01:CDS 45.0%
GGTATTGTTATCACGGAACG+AGG - Chr3:85818766-85818785 None:intergenic 45.0%
TCCATCTTCCAACTGCTTTC+CGG - Chr3:85817856-85817875 None:intergenic 45.0%
TCTGGATGTTGTAGTCAGCA+AGG - Chr3:85817884-85817903 None:intergenic 45.0%
! TTTGAGGCACATACCCTTGT+TGG + Chr3:85818339-85818358 MsG0380016622.01.T01:intron 45.0%
!! CATGTCAAAGGCACCAACAA+GGG - Chr3:85818355-85818374 None:intergenic 45.0%
!! TCATGTCAAAGGCACCAACA+AGG - Chr3:85818356-85818375 None:intergenic 45.0%
!!! CATCTTGTTTTGAGGCTTCG+TGG + Chr3:85818045-85818064 MsG0380016622.01.T01:CDS 45.0%
AAGATCAACCTCTGCTGGTC+CGG - Chr3:85817831-85817850 None:intergenic 50.0%
AGAATGTTAACCAGTGCCCC+CGG + Chr3:85818498-85818517 MsG0380016622.01.T01:intron 50.0%
AGATTCCTTATCCAGTGCCC+CGG + Chr3:85818627-85818646 MsG0380016622.01.T01:intron 50.0%
CAAGACTATCACCCTTGAGG+TGG + Chr3:85817650-85817669 MsG0380016622.01.T01:CDS 50.0%
GAGTCTGACAGTTCACGAGT+CGG - Chr3:85818926-85818945 None:intergenic 50.0%
GCCCCGCTTCCAATAATAGA+TGG - Chr3:85819417-85819436 None:intergenic 50.0%
TGCTCCTCGTTGACAACTGT+AGG + Chr3:85818382-85818401 MsG0380016622.01.T01:intron 50.0%
! CTCAAGGGTGATAGTCTTGC+CGG - Chr3:85817649-85817668 None:intergenic 50.0%
! GTTGGCCAGGAAGTATAACC+AGG + Chr3:85818095-85818114 MsG0380016622.01.T01:CDS 50.0%
! TTGGTGCTTAACCAATGCCC+CGG - Chr3:85818520-85818539 None:intergenic 50.0%
!! TGAGCCTTCTTTGATGGCGT+TGG + Chr3:85818077-85818096 MsG0380016622.01.T01:CDS 50.0%
!! TGCGGCAGATAGTCTTATCC+TGG - Chr3:85818116-85818135 None:intergenic 50.0%
!!! CTTGTTTTGAGGCTTCGTGG+TGG + Chr3:85818048-85818067 MsG0380016622.01.T01:CDS 50.0%
AATGTTAACCAGTGCCCCCG+GGG + Chr3:85818500-85818519 MsG0380016622.01.T01:intron 55.0%
ACAGTTCACGAGTCGGACAG+CGG - Chr3:85818919-85818938 None:intergenic 55.0%
AGATCAACCTCTGCTGGTCC+GGG - Chr3:85817830-85817849 None:intergenic 55.0%
ATTCCTTATCCAGTGCCCCG+GGG + Chr3:85818629-85818648 MsG0380016622.01.T01:intron 55.0%
CGGCAAGACTATCACCCTTG+AGG + Chr3:85817647-85817666 MsG0380016622.01.T01:CDS 55.0%
CTGGCCAACGCCATCAAAGA+AGG - Chr3:85818084-85818103 None:intergenic 55.0%
GAATGTTAACCAGTGCCCCC+GGG + Chr3:85818499-85818518 MsG0380016622.01.T01:intron 55.0%
GATCTTCGCCGGAAAGCAGT+TGG + Chr3:85817845-85817864 MsG0380016622.01.T01:CDS 55.0%
GATTCCTTATCCAGTGCCCC+GGG + Chr3:85818628-85818647 MsG0380016622.01.T01:intron 55.0%
GCCGGAAAGCAGTTGGAAGA+TGG + Chr3:85817852-85817871 MsG0380016622.01.T01:CDS 55.0%
GTCGCTTGACTCCACCTCAA+GGG - Chr3:85817664-85817683 None:intergenic 55.0%
TCCTCTAACATGCACCCCCT+AGG - Chr3:85819298-85819317 None:intergenic 55.0%
TCCTGCAGTTGACAGCACGA+GGG - Chr3:85819512-85819531 None:intergenic 55.0%
TGGTGCTTAACCAATGCCCC+GGG - Chr3:85818519-85818538 None:intergenic 55.0%
TTCCTGCAGTTGACAGCACG+AGG - Chr3:85819513-85819532 None:intergenic 55.0%
! CAGCAGAGGTTGATCTTCGC+CGG + Chr3:85817834-85817853 MsG0380016622.01.T01:CDS 55.0%
! GGTGATAGTCTTGCCGGTGA+GGG - Chr3:85817643-85817662 None:intergenic 55.0%
! TGTCGCTTGACTCCACCTCA+AGG - Chr3:85817665-85817684 None:intergenic 55.0%
!! CTTCTTTGATGGCGTTGGCC+AGG + Chr3:85818082-85818101 MsG0380016622.01.T01:CDS 55.0%
ACCCTCGTGCTGTCAACTGC+AGG + Chr3:85819508-85819527 MsG0380016622.01.T01:CDS 60.0%
ATCAACCTCTGCTGGTCCGG+GGG - Chr3:85817828-85817847 None:intergenic 60.0%
CAGTTCACGAGTCGGACAGC+GGG - Chr3:85818918-85818937 None:intergenic 60.0%
CGGCGAAGATCAACCTCTGC+TGG - Chr3:85817836-85817855 None:intergenic 60.0%
GAAGTGCGGACACAGCAACC+AGG + Chr3:85819536-85819555 MsG0380016622.01.T01:CDS 60.0%
GATCAACCTCTGCTGGTCCG+GGG - Chr3:85817829-85817848 None:intergenic 60.0%
GGTGCTTAACCAATGCCCCG+GGG - Chr3:85818518-85818537 None:intergenic 60.0%
GTGCTTAACCAATGCCCCGG+GGG - Chr3:85818517-85818536 None:intergenic 60.0%
TCTTGTTAACCGGTGCCCCC+GGG - Chr3:85818648-85818667 None:intergenic 60.0%
TTCCTTATCCAGTGCCCCGG+GGG + Chr3:85818630-85818649 MsG0380016622.01.T01:intron 60.0%
! GCCTAGGGGGTGCATGTTAG+AGG + Chr3:85819294-85819313 MsG0380016622.01.T01:intron 60.0%
! GGGTGATAGTCTTGCCGGTG+AGG - Chr3:85817644-85817663 None:intergenic 60.0%
! GTCTTGTTAACCGGTGCCCC+CGG - Chr3:85818649-85818668 None:intergenic 60.0%
CTTGTTAACCGGTGCCCCCG+GGG - Chr3:85818647-85818666 None:intergenic 65.0%
GAATTCCCCCGGACCAGCAG+AGG + Chr3:85817820-85817839 MsG0380016622.01.T01:CDS 65.0%
AACCAGTGCCCCCGGGGCAT+TGG + Chr3:85818506-85818525 MsG0380016622.01.T01:intron 70.0%
! AACCAATGCCCCGGGGGCAC+TGG - Chr3:85818511-85818530 None:intergenic 70.0%
!! TGCCCCCGGGGCACTGGATA+AGG - Chr3:85818635-85818654 None:intergenic 70.0%
! ATCCAGTGCCCCGGGGGCAC+CGG + Chr3:85818636-85818655 MsG0380016622.01.T01:intron 75.0%
! AACCGGTGCCCCCGGGGCAC+TGG - Chr3:85818641-85818660 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr3 gene 85817621 85819681 85817621 ID=MsG0380016622.01;Name=MsG0380016622.01
Chr3 mRNA 85817621 85819681 85817621 ID=MsG0380016622.01.T01;Parent=MsG0380016622.01;Name=MsG0380016622.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|5|0|128
Chr3 exon 85817621 85817723 85817621 ID=MsG0380016622.01.T01:exon:21789;Parent=MsG0380016622.01.T01
Chr3 exon 85817820 85817906 85817820 ID=MsG0380016622.01.T01:exon:21790;Parent=MsG0380016622.01.T01
Chr3 exon 85818034 85818136 85818034 ID=MsG0380016622.01.T01:exon:21791;Parent=MsG0380016622.01.T01
Chr3 exon 85819491 85819557 85819491 ID=MsG0380016622.01.T01:exon:21792;Parent=MsG0380016622.01.T01
Chr3 exon 85819655 85819681 85819655 ID=MsG0380016622.01.T01:exon:21793;Parent=MsG0380016622.01.T01
Chr3 CDS 85817621 85817723 85817621 ID=MsG0380016622.01.T01:cds;Parent=MsG0380016622.01.T01
Chr3 CDS 85817820 85817906 85817820 ID=MsG0380016622.01.T01:cds;Parent=MsG0380016622.01.T01
Chr3 CDS 85818034 85818136 85818034 ID=MsG0380016622.01.T01:cds;Parent=MsG0380016622.01.T01
Chr3 CDS 85819491 85819557 85819491 ID=MsG0380016622.01.T01:cds;Parent=MsG0380016622.01.T01
Chr3 CDS 85819655 85819681 85819655 ID=MsG0380016622.01.T01:cds;Parent=MsG0380016622.01.T01
Gene Sequence

>MsG0380016622.01.T01

ATGCAGATCTTCGTGAAAACCCTCACCGGCAAGACTATCACCCTTGAGGTGGAGTCAAGCGACACTATCGACAACGTCAAAGCTAAGATTCAGGATAAAGAAGGAATTCCCCCGGACCAGCAGAGGTTGATCTTCGCCGGAAAGCAGTTGGAAGATGGACGTACCCTTGCTGACTACAACATCCAGAAAGAATCAACTTTGCATCTTGTTTTGAGGCTTCGTGGTGGAATCATTGAGCCTTCTTTGATGGCGTTGGCCAGGAAGTATAACCAGGATAAGACTATCTGCCGCAAGTGCTATGCACGTTTACACCCTCGTGCTGTCAACTGCAGGAAAAAGAAGTGCGGACACAGCAACCAGTTGAGGCCAAAGAAGAAGATCAAGTAG

Protein sequence

>MsG0380016622.01.T01

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKTICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK*