AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021879.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021879.01.T01 MTR_4g078200 73.622 254 16 3 1 211 4 249 4.51e-125 360
MsG0480021879.01.T01 MTR_2g090760 69.643 224 25 1 3 183 1 224 1.12e-105 310
MsG0480021879.01.T01 MTR_4g078200 67.179 195 13 3 60 211 2 188 3.75e-79 241
MsG0480021879.01.T01 MTR_3g008250 41.509 212 81 1 17 185 10 221 9.73e-52 172
MsG0480021879.01.T01 MTR_8g046300 42.786 201 72 1 28 185 22 222 6.97e-51 170
MsG0480021879.01.T01 MTR_4g078190 58.741 143 19 6 190 316 46 164 2.59e-40 139
MsG0480021879.01.T01 MTR_5g093030 34.058 138 87 2 28 165 22 155 6.05e-19 83.6
MsG0480021879.01.T01 MTR_5g093040 33.684 95 57 1 28 122 18 106 2.87e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021879.01.T01 AT2G20530 67.257 226 27 2 1 183 1 222 2.60e-104 306
MsG0480021879.01.T01 AT2G20530 67.257 226 27 2 1 183 1 222 2.60e-104 306
MsG0480021879.01.T01 AT4G28510 68.750 224 27 1 3 183 1 224 5.37e-101 298
MsG0480021879.01.T01 AT1G03860 63.274 226 38 2 1 183 1 224 8.55e-100 295
MsG0480021879.01.T01 AT1G03860 63.274 226 38 2 1 183 1 224 8.55e-100 295
MsG0480021879.01.T01 AT5G44140 56.195 226 56 1 3 185 1 226 2.01e-83 253
MsG0480021879.01.T01 AT1G03860 63.522 159 15 1 68 183 1 159 7.27e-63 199
MsG0480021879.01.T01 AT5G40770 41.038 212 82 1 17 185 11 222 1.08e-49 167
MsG0480021879.01.T01 AT3G27280 40.566 212 83 1 17 185 11 222 6.97e-49 165
MsG0480021879.01.T01 AT3G27280 40.566 212 83 1 17 185 11 222 6.97e-49 165
MsG0480021879.01.T01 AT5G14300 36.970 165 87 2 36 183 22 186 2.29e-30 115

Find 81 sgRNAs with CRISPR-Local

Find 545 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGCGGTTGTTGTTTGGTTT+GGG 0.214858 4:+65496525 None:intergenic
GAAGGGTTTCGATGGGTTAT+AGG 0.226727 4:+65496553 None:intergenic
TTGATTAAAGTTAGCATTCT+TGG 0.252178 4:-65496285 MsG0480021879.01.T01:CDS
CTGCTACATTGAATGCAAAT+TGG 0.282731 4:+65488870 None:intergenic
TTCGATAGACCGTTGGTAAT+TGG 0.291628 4:+65493656 None:intergenic
CATTTAGTGGAGAGCACTTC+AGG 0.305741 4:-65494639 MsG0480021879.01.T01:CDS
AAGGGTTTCGATGGGTTATA+GGG 0.315371 4:+65496554 None:intergenic
CCACCACCACCGGGAACCTT+TGG 0.317038 4:+65496318 None:intergenic
CTTGGTGGACTTGCTGTGTA+TGG 0.321599 4:-65496267 MsG0480021879.01.T01:CDS
GAAGCGGTTGTTGTTTGGTT+TGG 0.323947 4:+65496524 None:intergenic
TGAATGATGATGAAGATATT+AGG 0.352069 4:-65488137 MsG0480021879.01.T01:CDS
ATCATAATATGTGTTCCTTC+AGG 0.372217 4:+65494708 None:intergenic
TCATCTATCACAACCGCATC+AGG 0.406155 4:+65488079 None:intergenic
AATAGAAAGAAAAGGTGGTT+TGG 0.408990 4:+65488778 None:intergenic
CACCACCACCGGGAACCTTT+GGG 0.411013 4:+65496319 None:intergenic
ATTGTCTTTAACCGTGTTGT+TGG 0.431088 4:-65496201 MsG0480021879.01.T01:CDS
ATCCCAAAGGTTCCCGGTGG+TGG 0.434393 4:-65496321 MsG0480021879.01.T01:CDS
GTGAAGATCCCAAAGGTTCC+CGG 0.442054 4:-65496327 MsG0480021879.01.T01:CDS
TGGTTGAAGCGGTTGTTGTT+TGG 0.446978 4:+65496519 None:intergenic
TACTACTTTGAGCTATCTAC+TGG 0.454617 4:-65488728 MsG0480021879.01.T01:CDS
TCGTGCACGACCTCATTTAG+TGG 0.454933 4:-65494652 MsG0480021879.01.T01:CDS
GTTAATAGCATTGTGGCATA+AGG 0.456848 4:+65487894 None:intergenic
AGCGTTTCATGTATAATAGA+AGG 0.462263 4:+65493601 None:intergenic
CCAAAGGTTCCCGGTGGTGG+TGG 0.465351 4:-65496318 MsG0480021879.01.T01:CDS
AACACTTTGTATAATGTTGA+GGG 0.467807 4:-65496237 MsG0480021879.01.T01:CDS
ATCACAGGCCTCTCAAACCA+TGG 0.472479 4:+65494684 None:intergenic
GAGGATTAGAATATCGTTGT+TGG 0.477924 4:+65487950 None:intergenic
AGCAGAAATTCCACCACCAC+CGG 0.480850 4:+65496308 None:intergenic
ACCAACGGTCTATCGAACTC+TGG 0.482518 4:-65493650 MsG0480021879.01.T01:CDS
CGTTGGAAGACATTAGAAGA+TGG 0.501767 4:+65488279 None:intergenic
TAGACCGTTGGTAATTGGTC+TGG 0.503898 4:+65493661 None:intergenic
ATTAAAGTTAGCATTCTTGG+TGG 0.509506 4:-65496282 MsG0480021879.01.T01:CDS
GCGGTTGTTGTTTGGTTTGG+GGG 0.513369 4:+65496527 None:intergenic
AGCGGTTGTTGTTTGGTTTG+GGG 0.513618 4:+65496526 None:intergenic
AAATTACCATTTGGAGATCA+CGG 0.515095 4:+65494613 None:intergenic
TGGGTGAGAATTATAATGAA+AGG 0.516327 4:-65493630 MsG0480021879.01.T01:CDS
TACAGATGAAGACAACAGTT+GGG 0.532973 4:+65488819 None:intergenic
GGGTGAGAATTATAATGAAA+GGG 0.533630 4:-65493629 MsG0480021879.01.T01:CDS
GATGAAGACAACAGTTGGGT+TGG 0.533789 4:+65488823 None:intergenic
AAACACTTTGTATAATGTTG+AGG 0.536366 4:-65496238 MsG0480021879.01.T01:CDS
AAGTGCTATTATTAGAGCAC+AGG 0.538979 4:-65493143 MsG0480021879.01.T01:intron
GTTGGTAATTGGTCTGGCAC+GGG 0.547210 4:+65493667 None:intergenic
TAATCCTCGTGGGAGAGACT+TGG 0.550558 4:-65487935 MsG0480021879.01.T01:CDS
TTACAGATGAAGACAACAGT+TGG 0.552379 4:+65488818 None:intergenic
CGTTGGTAATTGGTCTGGCA+CGG 0.557172 4:+65493666 None:intergenic
CAGGCAATGTATCATACAGA+TGG 0.558822 4:+65488098 None:intergenic
GGGGAAAGAAGGGTTTCGAT+GGG 0.563261 4:+65496546 None:intergenic
TTATGATCCCATGGTTTGAG+AGG 0.566462 4:-65494692 MsG0480021879.01.T01:CDS
AGGAAGCCGTGATCTCCAAA+TGG 0.568285 4:-65494619 MsG0480021879.01.T01:intron
GAACCTTGCGTTGCGGTGAG+TGG 0.570726 4:+65496499 None:intergenic
TATATGCAGGTCTATCCTGA+AGG 0.571690 4:-65494723 MsG0480021879.01.T01:intron
TGTTGTTGGTGTCAAAGATA+AGG 0.571696 4:-65496187 MsG0480021879.01.T01:intron
CCAACGGTCTATCGAACTCT+GGG 0.576164 4:-65493649 MsG0480021879.01.T01:CDS
GAAGTGCTCTCCACTAAATG+AGG 0.579441 4:+65494642 None:intergenic
GTTGGAAGACATTAGAAGAT+GGG 0.583485 4:+65488280 None:intergenic
GAACACATATTATGATCCCA+TGG 0.591378 4:-65494701 MsG0480021879.01.T01:CDS
TTTCATGTATAATAGAAGGC+AGG 0.592510 4:+65493605 None:intergenic
TTGCATAGTTAATAGCATTG+TGG 0.594280 4:+65487887 None:intergenic
CAACCACTCACCGCAACGCA+AGG 0.600694 4:-65496502 MsG0480021879.01.T01:intron
TTGACAATAGAAAGAAAAGG+TGG 0.602136 4:+65488773 None:intergenic
TGCTTGACAATAGAAAGAAA+AGG 0.603011 4:+65488770 None:intergenic
CCCAGAGTTCGATAGACCGT+TGG 0.613107 4:+65493649 None:intergenic
AACGATATTCTAATCCTCGT+GGG 0.617261 4:-65487945 MsG0480021879.01.T01:CDS
TCACAGGCCTCTCAAACCAT+GGG 0.623389 4:+65494685 None:intergenic
GCACGAACATCATAGATCAC+AGG 0.624896 4:+65494669 None:intergenic
GCAGAAATTCCACCACCACC+GGG 0.625221 4:+65496309 None:intergenic
ACATGAAACGCTCAAATCTG+TGG 0.625780 4:-65493590 MsG0480021879.01.T01:CDS
TCAGCTCATTACTCAGAGAG+AGG 0.636764 4:-65493548 MsG0480021879.01.T01:intron
CAACGATATTCTAATCCTCG+TGG 0.645432 4:-65487946 MsG0480021879.01.T01:CDS
TATCTTTGACACCAACAACA+CGG 0.648126 4:+65496190 None:intergenic
TCGTGGGAGAGACTTGGCCA+TGG 0.648913 4:-65487929 MsG0480021879.01.T01:CDS
CAACAACGTGAAGATCCCAA+AGG 0.657473 4:-65496334 MsG0480021879.01.T01:CDS
ACTTTGTATAATGTTGAGGG+TGG 0.664841 4:-65496234 MsG0480021879.01.T01:CDS
TCTCTGAGTAATGAGCTGAC+TGG 0.669211 4:+65493552 None:intergenic
GTATGATACATTGCCTGATG+CGG 0.674769 4:-65488092 MsG0480021879.01.T01:intron
GTTGCGGTGAGTGGTTGAAG+CGG 0.684094 4:+65496508 None:intergenic
CGTGCCAGACCAATTACCAA+CGG 0.684962 4:-65493665 MsG0480021879.01.T01:CDS
AGAAATTGAACCTTGCGTTG+CGG 0.695890 4:+65496492 None:intergenic
TAAGGCTAGACTCTTGACCA+TGG 0.698360 4:+65487912 None:intergenic
AAGATCCCAAAGGTTCCCGG+TGG 0.739208 4:-65496324 MsG0480021879.01.T01:CDS
ATGGCCAAGTCTCTCCCACG+AGG 0.742295 4:+65487931 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAGAACATATTAAAAT+AGG + Chr4:65489646-65489665 None:intergenic 10.0%
!! ATAATAATGAATATGAATTA+TGG + Chr4:65490522-65490541 None:intergenic 10.0%
!! ATTGTAAAAAAAAAAAAACT+AGG - Chr4:65493796-65493815 MsG0480021879.01.T01:intron 10.0%
!! TAATAATGAATATGAATTAT+GGG + Chr4:65490521-65490540 None:intergenic 10.0%
!!! AAATAGTTTTACTAATTAAT+CGG - Chr4:65495858-65495877 MsG0480021879.01.T01:intron 10.0%
!!! AATCTTTTTTTTTTAGTTAA+GGG + Chr4:65493867-65493886 None:intergenic 10.0%
!!! TAATCTTTTTTTTTTAGTTA+AGG + Chr4:65493868-65493887 None:intergenic 10.0%
!!! TAATTTTATTTTGTATGATT+TGG + Chr4:65491437-65491456 None:intergenic 10.0%
!!! TTTTTACTCAAATTAAAATA+TGG - Chr4:65493076-65493095 MsG0480021879.01.T01:intron 10.0%
!! AAAAAAAAATGATTGAAAGA+TGG + Chr4:65495138-65495157 None:intergenic 15.0%
!! AAACACATAAATTAAAAAAC+TGG + Chr4:65494698-65494717 None:intergenic 15.0%
!! AACATAAATTTCGAATTTAA+TGG + Chr4:65490580-65490599 None:intergenic 15.0%
!! AATAAATTCAAAAAAAACGT+AGG - Chr4:65493938-65493957 MsG0480021879.01.T01:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - Chr4:65488871-65488890 MsG0480021879.01.T01:CDS 15.0%
!! AATTAATTCAAAAAAACGTT+AGG + Chr4:65494940-65494959 None:intergenic 15.0%
!! AGAAAACATAACATAATATA+AGG + Chr4:65496147-65496166 None:intergenic 15.0%
!! AGATAAAAAGTAATAAAATC+TGG + Chr4:65488650-65488669 None:intergenic 15.0%
!! ATTAATTCAAAAAAACGTTA+GGG + Chr4:65494939-65494958 None:intergenic 15.0%
!! CATATTAAAATAGGTTTAAT+AGG + Chr4:65489637-65489656 None:intergenic 15.0%
!! TAACAAATAAGTATCATATA+TGG - Chr4:65493220-65493239 MsG0480021879.01.T01:intron 15.0%
!!! AAAAAAACTAAATGTTCTTT+TGG + Chr4:65494037-65494056 None:intergenic 15.0%
!!! AAAAAACTTAAATGTTCTTT+TGG - Chr4:65494787-65494806 MsG0480021879.01.T01:intron 15.0%
!!! ATTGTTAAATAAGGTTTTAT+GGG - Chr4:65492187-65492206 MsG0480021879.01.T01:intron 15.0%
!!! CTACTTTAATTTATTATGAT+GGG + Chr4:65490277-65490296 None:intergenic 15.0%
!!! GTTTTTTAATTTATGTGTTT+AGG - Chr4:65494698-65494717 MsG0480021879.01.T01:CDS 15.0%
!!! GTTTTTTTGAATTAATTTGA+CGG - Chr4:65494943-65494962 MsG0480021879.01.T01:intron 15.0%
!!! TAATCTCATTTAAAATTTCA+TGG + Chr4:65492585-65492604 None:intergenic 15.0%
!!! TATCTTCTAATAGTTTTTTT+TGG + Chr4:65495083-65495102 None:intergenic 15.0%
!!! TCTACTTTAATTTATTATGA+TGG + Chr4:65490278-65490297 None:intergenic 15.0%
!!! TTTTTGGTTAACTATATTTT+TGG - Chr4:65493829-65493848 MsG0480021879.01.T01:intron 15.0%
!! AAAAGCTTCTATGTTAAAAA+AGG + Chr4:65489266-65489285 None:intergenic 20.0%
!! AAACAAAAGAAATTACCATT+TGG + Chr4:65489861-65489880 None:intergenic 20.0%
!! AAATGAAAGGAATATACATA+AGG + Chr4:65494487-65494506 None:intergenic 20.0%
!! AAGATAAAAATAAGCAAATG+AGG + Chr4:65492267-65492286 None:intergenic 20.0%
!! AATTATTGTTTGATTGTTTG+AGG - Chr4:65496294-65496313 MsG0480021879.01.T01:CDS 20.0%
!! AGTGTACATAGTAATAATTA+GGG - Chr4:65490316-65490335 MsG0480021879.01.T01:intron 20.0%
!! CATAAACTGAACTAAAAAAT+AGG - Chr4:65489470-65489489 MsG0480021879.01.T01:intron 20.0%
!! CTAAACTAGAATTAAAAAAC+TGG - Chr4:65494141-65494160 MsG0480021879.01.T01:intron 20.0%
!! GATACCAAAAATATAGTTAA+GGG - Chr4:65495039-65495058 MsG0480021879.01.T01:intron 20.0%
!! GATACCAAATAAATACTTAA+GGG + Chr4:65494030-65494011 None:intergenic 20.0%
!! GTAAATAAGTTAAACTATCT+TGG + Chr4:65496046-65496065 None:intergenic 20.0%
!! TAAACAAATTGAATTGAGTA+GGG + Chr4:65488520-65488539 None:intergenic 20.0%
!! TAATCAAAATCAAATATCAG+TGG + Chr4:65496257-65496276 None:intergenic 20.0%
!! TAATTTACAATGAGAATCAT+CGG + Chr4:65493290-65493309 None:intergenic 20.0%
!! TAGTGTACATAGTAATAATT+AGG - Chr4:65490315-65490334 MsG0480021879.01.T01:intron 20.0%
!! TATATTGATATACTACAACA+AGG + Chr4:65489708-65489727 None:intergenic 20.0%
!! TATGATAAACACTTATATGT+AGG - Chr4:65496011-65496030 MsG0480021879.01.T01:intron 20.0%
!! TATTTATGGTATGATGATAT+TGG - Chr4:65494583-65494602 MsG0480021879.01.T01:intron 20.0%
!! TGATACCAAAAATATAGTTA+AGG - Chr4:65495038-65495057 MsG0480021879.01.T01:intron 20.0%
!! TGATTTAAGAAGAAAACAAT+AGG + Chr4:65494675-65494656 None:intergenic 20.0%
!! TGATTTAAGAAGAAAACAAT+TGG - Chr4:65494656-65494675 MsG0480021879.01.T01:CDS 20.0%
!! TTAAACAAATTGAATTGAGT+AGG + Chr4:65488521-65488540 None:intergenic 20.0%
!! TTAATTCAAAAAAACGTTAG+GGG + Chr4:65494938-65494957 None:intergenic 20.0%
!! TTTGAATTTATTTAACGGAA+GGG + Chr4:65493930-65493949 None:intergenic 20.0%
!!! AAAATATCGTTTTAGATGAT+TGG - Chr4:65488996-65489015 MsG0480021879.01.T01:intron 20.0%
!!! AAATATCGTTTTAGATGATT+GGG - Chr4:65488997-65489016 MsG0480021879.01.T01:intron 20.0%
!!! AACTAACAATTCAGTTTTTT+AGG - Chr4:65489546-65489565 MsG0480021879.01.T01:intron 20.0%
!!! ATGTAAAAACTTTGAAATGA+AGG - Chr4:65494336-65494355 MsG0480021879.01.T01:intron 20.0%
!!! CAGTTTTTTAATTCTAGTTT+AGG + Chr4:65494143-65494162 None:intergenic 20.0%
!!! CTATTTTAATATGTTTCGTT+AGG - Chr4:65489659-65489678 MsG0480021879.01.T01:intron 20.0%
!!! CTTTCTATCGATTTTTTTAA+GGG + Chr4:65488945-65488964 None:intergenic 20.0%
!!! GATTGTTAAATAAGGTTTTA+TGG - Chr4:65492186-65492205 MsG0480021879.01.T01:intron 20.0%
!!! TCTAAAATGATCCAAATTAT+AGG - Chr4:65491105-65491124 MsG0480021879.01.T01:intron 20.0%
!!! TCTTTCTATCGATTTTTTTA+AGG + Chr4:65488946-65488965 None:intergenic 20.0%
!!! TGATTTCATAATCTTTTCAA+TGG - Chr4:65492145-65492164 MsG0480021879.01.T01:intron 20.0%
!!! TGATTTGATGTTGATTTTAA+TGG - Chr4:65488068-65488087 MsG0480021879.01.T01:intron 20.0%
!!! TGATTTTGAAATTGTTGAAA+CGG + Chr4:65495428-65495447 None:intergenic 20.0%
!!! TGTTGTTGTTAGAATATTTA+TGG - Chr4:65494569-65494588 MsG0480021879.01.T01:intron 20.0%
!!! TTCAAAAATTTAAGAGTGTA+AGG - Chr4:65488781-65488800 MsG0480021879.01.T01:CDS 20.0%
!!! TTTAACATAGAAGCTTTTTA+GGG - Chr4:65489268-65489287 MsG0480021879.01.T01:intron 20.0%
!!! TTTAATCTTCTTCTTTGTTT+AGG - Chr4:65489069-65489088 MsG0480021879.01.T01:intron 20.0%
!!! TTTTAACATAGAAGCTTTTT+AGG - Chr4:65489267-65489286 MsG0480021879.01.T01:intron 20.0%
!!! TTTTCTTAAACTAGAATTAG+CGG - Chr4:65495250-65495269 MsG0480021879.01.T01:intron 20.0%
!!! TTTTGAATTTATTTAACGGA+AGG + Chr4:65493931-65493950 None:intergenic 20.0%
! AAAAACTTTCCAATAACACA+TGG - Chr4:65492773-65492792 MsG0480021879.01.T01:intron 25.0%
! AAACACTTTGTATAATGTTG+AGG - Chr4:65488224-65488243 MsG0480021879.01.T01:intron 25.0%
! AACACTTTGTATAATGTTGA+GGG - Chr4:65488225-65488244 MsG0480021879.01.T01:intron 25.0%
! AAGATCCATAATAGATTACA+TGG + Chr4:65490733-65490752 None:intergenic 25.0%
! AATGTGATACAATTGAGAAT+TGG + Chr4:65490477-65490496 None:intergenic 25.0%
! ACACAGTAATAAAGTTAGAA+TGG + Chr4:65490639-65490658 None:intergenic 25.0%
! ACTTTAGTACACTTGATTAT+AGG - Chr4:65489920-65489939 MsG0480021879.01.T01:intron 25.0%
! AGTTGAATACATAAATTGCT+CGG - Chr4:65492534-65492553 MsG0480021879.01.T01:intron 25.0%
! ATTGTGCATAAGAAAAATGT+GGG + Chr4:65490678-65490697 None:intergenic 25.0%
! CAACATTAAAATGACTTCAA+TGG + Chr4:65490014-65490033 None:intergenic 25.0%
! CAACTAATACTGGATTAATT+GGG - Chr4:65490971-65490990 MsG0480021879.01.T01:intron 25.0%
! CATTTCCATGTAATCTATTA+TGG - Chr4:65490725-65490744 MsG0480021879.01.T01:intron 25.0%
! CGATACCAAATAAATACTTA+AGG - Chr4:65494010-65494029 MsG0480021879.01.T01:intron 25.0%
! CGATACCAAATAAATACTTA+AGG + Chr4:65494029-65494010 None:intergenic 25.0%
! CTGATTCTAAATTGAAAGTT+CGG - Chr4:65489507-65489526 MsG0480021879.01.T01:intron 25.0%
! GATCAGAATTCAAAATCAAA+AGG + Chr4:65496479-65496498 None:intergenic 25.0%
! GCAAACTTCTAATTAAATGA+TGG - Chr4:65493027-65493046 MsG0480021879.01.T01:intron 25.0%
! GTGAATAGTGAAAGATAAAA+GGG + Chr4:65496235-65496254 None:intergenic 25.0%
! GTGTACATAGTAATAATTAG+GGG - Chr4:65490317-65490336 MsG0480021879.01.T01:intron 25.0%
! GTTTGTCATAATTTAAGAGA+AGG - Chr4:65493655-65493674 MsG0480021879.01.T01:CDS 25.0%
! TAAAGTAGAATATGATGCTT+TGG - Chr4:65490289-65490308 MsG0480021879.01.T01:intron 25.0%
! TAACTAACAGTGAATGAAAA+TGG + Chr4:65488306-65488325 None:intergenic 25.0%
! TAACTTTATTACTGTGTAGA+CGG - Chr4:65490642-65490661 MsG0480021879.01.T01:intron 25.0%
! TAAGAACAAGAAAAAATTGC+AGG + Chr4:65489886-65489905 None:intergenic 25.0%
! TAAGTATCATATATGGTGTA+TGG - Chr4:65493166-65493185 MsG0480021879.01.T01:CDS 25.0%
! TAAGTATGAAACTTCATTAG+AGG + Chr4:65493583-65493602 None:intergenic 25.0%
! TATGTGTGTAAAAACCTTAA+AGG + Chr4:65490181-65490200 None:intergenic 25.0%
! TATTGTGCATAAGAAAAATG+TGG + Chr4:65490679-65490698 None:intergenic 25.0%
! TCAACTAATACTGGATTAAT+TGG - Chr4:65490970-65490989 MsG0480021879.01.T01:intron 25.0%
! TGAGAGAAAAAAGTTCAATA+GGG + Chr4:65491706-65491725 None:intergenic 25.0%
! TGTACATAGTAATAATTAGG+GGG - Chr4:65490318-65490337 MsG0480021879.01.T01:intron 25.0%
! TTATGAACCATCTTATATGT+AGG + Chr4:65491363-65491382 None:intergenic 25.0%
! TTCAACTTCTCATTACTTAA+TGG - Chr4:65491750-65491769 MsG0480021879.01.T01:intron 25.0%
! TTGAGAGAAAAAAGTTCAAT+AGG + Chr4:65491707-65491726 None:intergenic 25.0%
! TTGATTAAAGTTAGCATTCT+TGG - Chr4:65488177-65488196 MsG0480021879.01.T01:intron 25.0%
! TTGGTCCTTAAGTATTTATT+TGG + Chr4:65494018-65494037 None:intergenic 25.0%
! TTTGAATTCTGATCTGAAAA+GGG - Chr4:65496485-65496504 MsG0480021879.01.T01:intron 25.0%
!! AAGTATTTTCCATGTGTTAT+TGG + Chr4:65492785-65492804 None:intergenic 25.0%
!! AATTGAGTTTGATAGTTTGA+TGG - Chr4:65492288-65492307 MsG0480021879.01.T01:intron 25.0%
!! ATACTTCATTTTGTATACGT+TGG + Chr4:65496203-65496222 None:intergenic 25.0%
!! GATTGTCATTATCTTTTCAA+TGG - Chr4:65492117-65492136 MsG0480021879.01.T01:intron 25.0%
!! GTATTTATTTGGTATCGTTT+TGG - Chr4:65494818-65494837 MsG0480021879.01.T01:intron 25.0%
!! GTATTTATTTGGTATCGTTT+TGG + Chr4:65494837-65494818 None:intergenic 25.0%
!! TATTTTATCATCTCTACAGT+AGG + Chr4:65488982-65489001 None:intergenic 25.0%
!! TGAATGATGATGAAGATATT+AGG - Chr4:65496325-65496344 MsG0480021879.01.T01:CDS 25.0%
!! TGTTATGTTTTCTGAATTTC+AGG - Chr4:65496154-65496173 MsG0480021879.01.T01:intron 25.0%
!! TTTGAATTAATTTGACGGAA+GGG - Chr4:65494948-65494967 MsG0480021879.01.T01:intron 25.0%
!! TTTTGAATTCTGATCTGAAA+AGG - Chr4:65496484-65496503 MsG0480021879.01.T01:intron 25.0%
!!! AAATCATTTTAACCGATCAT+GGG + Chr4:65489155-65489174 None:intergenic 25.0%
!!! AATCAAACTTTGTTTTAGCA+GGG - Chr4:65488810-65488829 MsG0480021879.01.T01:CDS 25.0%
!!! AGCTTCTAATTTTTTTTTGG+TGG - Chr4:65492929-65492948 MsG0480021879.01.T01:intron 25.0%
!!! ATGGTTTATTTTTGACATAC+AGG - Chr4:65491769-65491788 MsG0480021879.01.T01:intron 25.0%
!!! CTATATTTTTGGTATCACTT+TGG + Chr4:65495035-65495054 None:intergenic 25.0%
!!! GATTTTGAAATTGTTGAAAC+GGG + Chr4:65495427-65495446 None:intergenic 25.0%
!!! GCAAGCTTCTAATTTTTTTT+TGG - Chr4:65492926-65492945 MsG0480021879.01.T01:intron 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG - Chr4:65488809-65488828 MsG0480021879.01.T01:CDS 25.0%
!!! TGGTTTATTTTTGACATACA+GGG - Chr4:65491770-65491789 MsG0480021879.01.T01:intron 25.0%
!!! TTCTAATTTTTTTTTGGTGG+TGG - Chr4:65492932-65492951 MsG0480021879.01.T01:intron 25.0%
!!! TTTTGAATTAATTTGACGGA+AGG - Chr4:65494947-65494966 MsG0480021879.01.T01:intron 25.0%
AAAAAGTAACTCCTGTGTAT+TGG + Chr4:65491732-65491751 None:intergenic 30.0%
AAAACGACACTCATTTGAAA+TGG - Chr4:65490416-65490435 MsG0480021879.01.T01:intron 30.0%
AAAAGTAACTCCTGTGTATT+GGG + Chr4:65491731-65491750 None:intergenic 30.0%
AAAATGAATCACAACCATAC+AGG - Chr4:65491068-65491087 MsG0480021879.01.T01:intron 30.0%
AAATCATAAGTTCTCCGAAA+CGG + Chr4:65495777-65495796 None:intergenic 30.0%
AAATGAAAATTGGTGCACAT+GGG + Chr4:65494519-65494538 None:intergenic 30.0%
AAATGCAATAATGTTGTCCA+GGG - Chr4:65490206-65490225 MsG0480021879.01.T01:intron 30.0%
AAATGCATCAATAGGTAACA+AGG + Chr4:65490254-65490273 None:intergenic 30.0%
AAATTACCATTTGGAGATCA+CGG + Chr4:65489852-65489871 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG - Chr4:65488886-65488905 MsG0480021879.01.T01:CDS 30.0%
AATAGAAAGAAAAGGTGGTT+TGG + Chr4:65495687-65495706 None:intergenic 30.0%
ACTAAATTGAAAAGCGAGAA+TGG - Chr4:65490361-65490380 MsG0480021879.01.T01:intron 30.0%
ACTCAGGGCAAAAAAAATTT+AGG + Chr4:65488491-65488510 None:intergenic 30.0%
AGAAAGGATAATTACGAAGA+AGG + Chr4:65495478-65495497 None:intergenic 30.0%
AGACTGTGATAAAAATGACA+GGG + Chr4:65489241-65489260 None:intergenic 30.0%
AGCGTTTCATGTATAATAGA+AGG + Chr4:65490864-65490883 None:intergenic 30.0%
AGTGAATTGTATAGAGAGAA+AGG + Chr4:65495494-65495513 None:intergenic 30.0%
ATAAGACAATCAACTCCAAT+AGG + Chr4:65492689-65492708 None:intergenic 30.0%
ATCAAGTGTACTAAAGTACA+TGG + Chr4:65489917-65489936 None:intergenic 30.0%
ATCATAATATGTGTTCCTTC+AGG + Chr4:65489757-65489776 None:intergenic 30.0%
ATCTTCTGTTCAACTAATAC+TGG - Chr4:65490961-65490980 MsG0480021879.01.T01:intron 30.0%
ATTAAAGTTAGCATTCTTGG+TGG - Chr4:65488180-65488199 MsG0480021879.01.T01:intron 30.0%
ATTCCAACTGATATGTAAAG+AGG + Chr4:65491003-65491022 None:intergenic 30.0%
CAAGATTAGAACACTATGAA+AGG + Chr4:65488747-65488766 None:intergenic 30.0%
CACTCAAAATAAAATGTGTC+CGG + Chr4:65488372-65488391 None:intergenic 30.0%
CCTCATCTTCTTAAAAAACT+CGG - Chr4:65494222-65494241 MsG0480021879.01.T01:intron 30.0%
CTCAGGGCAAAAAAAATTTA+GGG + Chr4:65488490-65488509 None:intergenic 30.0%
CTGCAGTGTTAAATGAAAAT+TGG + Chr4:65494529-65494548 None:intergenic 30.0%
CTGGTTTATAACTAGAAAAC+TGG - Chr4:65492833-65492852 MsG0480021879.01.T01:intron 30.0%
GAAGAAGGGATTGTTAAATA+AGG - Chr4:65492178-65492197 MsG0480021879.01.T01:intron 30.0%
GAAGAATTTCAGCTGAATTA+TGG + Chr4:65493450-65493469 None:intergenic 30.0%
GAGAGAAAAAAGTTCAATAG+GGG + Chr4:65491705-65491724 None:intergenic 30.0%
GATATAAACTCTGGATAATC+AGG - Chr4:65491511-65491530 MsG0480021879.01.T01:intron 30.0%
GATTGACAACACTATTAAGA+GGG + Chr4:65492329-65492348 None:intergenic 30.0%
GGGTGAGAATTATAATGAAA+GGG - Chr4:65490833-65490852 MsG0480021879.01.T01:intron 30.0%
GGTAAAAAAAAATAAGAGCG+CGG - Chr4:65495218-65495237 MsG0480021879.01.T01:intron 30.0%
GGTGAATAGTGAAAGATAAA+AGG + Chr4:65496236-65496255 None:intergenic 30.0%
GTATTAGTTGAACAGAAGAT+AGG + Chr4:65490961-65490980 None:intergenic 30.0%
GTGTGGATAAGTATCATATA+TGG - Chr4:65493159-65493178 MsG0480021879.01.T01:CDS 30.0%
TAAATGAAAATTGGTGCACA+TGG + Chr4:65494520-65494539 None:intergenic 30.0%
TAGACTGTGATAAAAATGAC+AGG + Chr4:65489242-65489261 None:intergenic 30.0%
TATCTCCCAATGCTATTATT+TGG - Chr4:65493410-65493429 MsG0480021879.01.T01:intron 30.0%
TCATGTTTCCATAACATAGA+CGG + Chr4:65489182-65489201 None:intergenic 30.0%
TGAAACTGTGATACAGATTA+TGG + Chr4:65490707-65490726 None:intergenic 30.0%
TGATGAAGAAAATGATGAAG+AGG - Chr4:65494741-65494760 MsG0480021879.01.T01:intron 30.0%
TGATGAAGAAAATGATGAAG+AGG + Chr4:65494760-65494741 None:intergenic 30.0%
TGATTGACAACACTATTAAG+AGG + Chr4:65492330-65492349 None:intergenic 30.0%
TGCTTGACAATAGAAAGAAA+AGG + Chr4:65495695-65495714 None:intergenic 30.0%
TGGGTGAGAATTATAATGAA+AGG - Chr4:65490832-65490851 MsG0480021879.01.T01:intron 30.0%
TGGTCCCTTAAGTATTTATT+TGG - Chr4:65494807-65494826 MsG0480021879.01.T01:intron 30.0%
TGTAATAATTTCCAGCATCT+TGG + Chr4:65492417-65492436 None:intergenic 30.0%
TGTTTGAGTGATATAAACTC+TGG - Chr4:65491502-65491521 MsG0480021879.01.T01:intron 30.0%
TTACTTATGCACATACCATT+AGG - Chr4:65495337-65495356 MsG0480021879.01.T01:intron 30.0%
TTAGTAAAATGTAATGTCCC+TGG + Chr4:65490226-65490245 None:intergenic 30.0%
TTCAAAATGAGTGTCCTTTA+AGG - Chr4:65490164-65490183 MsG0480021879.01.T01:intron 30.0%
TTCATTCAAGAGGAAAAAAG+TGG + Chr4:65491615-65491634 None:intergenic 30.0%
TTGACAATAGAAAGAAAAGG+TGG + Chr4:65495692-65495711 None:intergenic 30.0%
TTGCATAGTTAATAGCATTG+TGG + Chr4:65496578-65496597 None:intergenic 30.0%
TTGTGCATAAGAAAAATGTG+GGG + Chr4:65490677-65490696 None:intergenic 30.0%
TTTCATGTATAATAGAAGGC+AGG + Chr4:65490860-65490879 None:intergenic 30.0%
! AAGGAAGATATTGACTGAAA+GGG - Chr4:65491144-65491163 MsG0480021879.01.T01:intron 30.0%
! ACATAACTATTTCTTTCCAC+TGG + Chr4:65491970-65491989 None:intergenic 30.0%
! ACTAGGCTTAAATGCATTTT+TGG - Chr4:65493813-65493832 MsG0480021879.01.T01:intron 30.0%
! ATCAACTAAACCCAGATTTT+GGG + Chr4:65494845-65494864 None:intergenic 30.0%
! ATTGTTTGATTGTTTGAGGT+AGG - Chr4:65496298-65496317 MsG0480021879.01.T01:CDS 30.0%
! GAATCTCCAGGATTTAAAAT+TGG - Chr4:65491941-65491960 MsG0480021879.01.T01:intron 30.0%
! GATAATAGCAACTTGTCTTT+TGG - Chr4:65489942-65489961 MsG0480021879.01.T01:intron 30.0%
! TAAGGAAGATATTGACTGAA+AGG - Chr4:65491143-65491162 MsG0480021879.01.T01:intron 30.0%
! TAGTATGCCTTTTTATATGC+AGG - Chr4:65489726-65489745 MsG0480021879.01.T01:intron 30.0%
! TGAGTTTAGTTCAGTTTGTA+TGG + Chr4:65492998-65493017 None:intergenic 30.0%
! TGGTCCCTTAACTATATTTT+TGG + Chr4:65495046-65495065 None:intergenic 30.0%
! TTTAGTTCACAGTTTCAGTT+TGG - Chr4:65489580-65489599 MsG0480021879.01.T01:intron 30.0%
!! AAAGGACACTCATTTTGAAA+CGG + Chr4:65490163-65490182 None:intergenic 30.0%
!! AATTCTAGTTTAGGTGATGA+AGG + Chr4:65494134-65494153 None:intergenic 30.0%
!! CTATCACAAGTTTGACTTTT+GGG - Chr4:65491203-65491222 MsG0480021879.01.T01:intron 30.0%
!! CTTATTTTCATAAGCTCTTC+AGG - Chr4:65495816-65495835 MsG0480021879.01.T01:intron 30.0%
!! GAAATCATTTTAACCGATCA+TGG + Chr4:65489156-65489175 None:intergenic 30.0%
!! GAATGATGAAGGTTTTGATA+AGG - Chr4:65494893-65494912 MsG0480021879.01.T01:intron 30.0%
!! GTTTAGTTGATGAATGATGA+AGG - Chr4:65494854-65494873 MsG0480021879.01.T01:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - Chr4:65488902-65488921 MsG0480021879.01.T01:intron 30.0%
!! TCTATCACAAGTTTGACTTT+TGG - Chr4:65491202-65491221 MsG0480021879.01.T01:intron 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - Chr4:65488901-65488920 MsG0480021879.01.T01:intron 30.0%
!! TTATTTTGCCAGGTGAAAAT+TGG - Chr4:65490753-65490772 MsG0480021879.01.T01:intron 30.0%
!! TTCAATGGACTAAACTGAAA+GGG + Chr4:65489999-65490018 None:intergenic 30.0%
!! TTTTGAGAAGTTGAGTTACT+TGG - Chr4:65495158-65495177 MsG0480021879.01.T01:intron 30.0%
!!! CGTTGTTGTTTTCATTCATT+TGG + Chr4:65494460-65494479 None:intergenic 30.0%
!!! CTATATTTTTGGCATCACTT+TGG - Chr4:65493840-65493859 MsG0480021879.01.T01:intron 30.0%
!!! GTTTTCTAGTTATAAACCAG+CGG + Chr4:65492833-65492852 None:intergenic 30.0%
!!! TATGGATCTTTTATTTTGCC+AGG - Chr4:65490743-65490762 MsG0480021879.01.T01:intron 30.0%
!!! TTTATCTCCGTTACCTTTTT+TGG + Chr4:65494975-65494994 None:intergenic 30.0%
!!! TTTTGGCTTAAATGCGTTTT+TGG + Chr4:65495066-65495085 None:intergenic 30.0%
AAAAAACTTCTGCTCTGGTT+GGG + Chr4:65489215-65489234 None:intergenic 35.0%
AAACTTGACAATCACCCAAA+AGG - Chr4:65492447-65492466 MsG0480021879.01.T01:intron 35.0%
AAAGTATGCGTTCAACTTGA+GGG - Chr4:65492719-65492738 MsG0480021879.01.T01:intron 35.0%
AAATGAAAAGATCGCTGCAA+TGG - Chr4:65491463-65491482 MsG0480021879.01.T01:intron 35.0%
AACCCACCAAATAATAGCAT+TGG + Chr4:65493419-65493438 None:intergenic 35.0%
AACGATATTCTAATCCTCGT+GGG - Chr4:65496517-65496536 MsG0480021879.01.T01:five_prime_UTR 35.0%
AAGGATAATTACGAAGAAGG+AGG + Chr4:65495475-65495494 None:intergenic 35.0%
AATAATTTCCAGCATCTTGG+TGG + Chr4:65492414-65492433 None:intergenic 35.0%
AATGGAACATTGAGAGAAGA+AGG - Chr4:65492163-65492182 MsG0480021879.01.T01:intron 35.0%
AATTGCAAATTCTGCCAACA+AGG - Chr4:65491890-65491909 MsG0480021879.01.T01:intron 35.0%
ACAAGGTTACTAGTCAACAT+AGG + Chr4:65489691-65489710 None:intergenic 35.0%
ACCCACCAAATAATAGCATT+GGG + Chr4:65493418-65493437 None:intergenic 35.0%
ACTTGAACTCTATCCAAGTT+TGG + Chr4:65489431-65489450 None:intergenic 35.0%
ACTTTGTATAATGTTGAGGG+TGG - Chr4:65488228-65488247 MsG0480021879.01.T01:intron 35.0%
AGATGAAGTGACAGTTGTAT+TGG + Chr4:65489382-65489401 None:intergenic 35.0%
AGGATAATTACGAAGAAGGA+GGG + Chr4:65495474-65495493 None:intergenic 35.0%
AGTCATTTCCTTGTGTTTCT+AGG - Chr4:65492883-65492902 MsG0480021879.01.T01:intron 35.0%
ATAATTTCCAGCATCTTGGT+GGG + Chr4:65492413-65492432 None:intergenic 35.0%
ATACTTATCCACACTAGACA+TGG + Chr4:65493153-65493172 None:intergenic 35.0%
ATATCAACAGGAAGAAAAGG+AGG - Chr4:65494305-65494324 MsG0480021879.01.T01:intron 35.0%
ATATGATACATAAGCCCACA+AGG + Chr4:65490097-65490116 None:intergenic 35.0%
ATCCAGTGCAATGTTGAATT+GGG + Chr4:65491173-65491192 None:intergenic 35.0%
ATCCTTAGAAGACTTCAAGT+TGG + Chr4:65493704-65493723 None:intergenic 35.0%
ATGCATAAAATATGCAGGTC+CGG + Chr4:65492972-65492991 None:intergenic 35.0%
ATGCCTCTTTACATATCAGT+TGG - Chr4:65490997-65491016 MsG0480021879.01.T01:intron 35.0%
ATGGAACATTGAGAGAAGAA+GGG - Chr4:65492164-65492183 MsG0480021879.01.T01:intron 35.0%
ATTGTCTTTAACCGTGTTGT+TGG - Chr4:65488261-65488280 MsG0480021879.01.T01:intron 35.0%
ATTTCATGCCGTCTATGTTA+TGG - Chr4:65489171-65489190 MsG0480021879.01.T01:intron 35.0%
CAATGTTTCCTAGAAACACA+AGG + Chr4:65492894-65492913 None:intergenic 35.0%
CAGCTTTGCAAACTGAAATA+TGG - Chr4:65492080-65492099 MsG0480021879.01.T01:intron 35.0%
CCATCTTATATGTAGGAATC+AGG + Chr4:65491356-65491375 None:intergenic 35.0%
CCTGATTCCTACATATAAGA+TGG - Chr4:65491353-65491372 MsG0480021879.01.T01:intron 35.0%
CTCATATCAACAGGAAGAAA+AGG - Chr4:65494302-65494321 MsG0480021879.01.T01:intron 35.0%
CTGCTACATTGAATGCAAAT+TGG + Chr4:65495595-65495614 None:intergenic 35.0%
GAAAATGATGAAGAGGAGAA+AGG + Chr4:65494767-65494748 None:intergenic 35.0%
GAAATGCAATAATGTTGTCC+AGG - Chr4:65490205-65490224 MsG0480021879.01.T01:intron 35.0%
GAACACATATTATGATCCCA+TGG - Chr4:65489761-65489780 MsG0480021879.01.T01:intron 35.0%
GAGGATTAGAATATCGTTGT+TGG + Chr4:65496515-65496534 None:intergenic 35.0%
GATTGAAAGATGGTTTCTGA+TGG + Chr4:65495128-65495147 None:intergenic 35.0%
GCTGGAAATTATTACATGCT+CGG - Chr4:65492421-65492440 MsG0480021879.01.T01:intron 35.0%
GGACAATGCATAAAATATGC+AGG + Chr4:65492977-65492996 None:intergenic 35.0%
GGATAGACCTGCATATAAAA+AGG + Chr4:65489736-65489755 None:intergenic 35.0%
GTATCATATATGGTGTATGG+TGG - Chr4:65493169-65493188 MsG0480021879.01.T01:CDS 35.0%
GTCAAAAACTGAACCAAACT+TGG - Chr4:65489415-65489434 MsG0480021879.01.T01:intron 35.0%
GTCAAATAGGTTCATTCAAG+AGG + Chr4:65491625-65491644 None:intergenic 35.0%
GTGATACAATTGAGAATTGG+TGG + Chr4:65490474-65490493 None:intergenic 35.0%
GTGATATTGTTTGTACACAG+TGG - Chr4:65495552-65495571 MsG0480021879.01.T01:intron 35.0%
GTTAATAGCATTGTGGCATA+AGG + Chr4:65496571-65496590 None:intergenic 35.0%
GTTGGAAGACATTAGAAGAT+GGG + Chr4:65496185-65496204 None:intergenic 35.0%
GTTGTAATAGTAGTGATGAG+AGG - Chr4:65494610-65494629 MsG0480021879.01.T01:intron 35.0%
TACAGATGAAGACAACAGTT+GGG + Chr4:65495646-65495665 None:intergenic 35.0%
TACTACTTTGAGCTATCTAC+TGG - Chr4:65495734-65495753 MsG0480021879.01.T01:intron 35.0%
TAGGTTATCACACTGTATAC+TGG - Chr4:65489088-65489107 MsG0480021879.01.T01:intron 35.0%
TATCTTTGACACCAACAACA+CGG + Chr4:65488275-65488294 None:intergenic 35.0%
TATGTGCATAAGTAAAGAGG+TGG + Chr4:65495332-65495351 None:intergenic 35.0%
TCCCAATGCTATTATTTGGT+GGG - Chr4:65493414-65493433 MsG0480021879.01.T01:intron 35.0%
TCCTCAAGTCTATAAATGCA+GGG + Chr4:65491839-65491858 None:intergenic 35.0%
TCGACTAACAGCCTATAATT+TGG + Chr4:65491119-65491138 None:intergenic 35.0%
TCTCATCTTCACGATTGAAT+CGG - Chr4:65493325-65493344 MsG0480021879.01.T01:intron 35.0%
TGCATTCAAGAAAACCTTGT+TGG + Chr4:65491907-65491926 None:intergenic 35.0%
TGGGATGACTGAAAAATGAA+AGG + Chr4:65494500-65494519 None:intergenic 35.0%
TGGTATGTGCATAAGTAAAG+AGG + Chr4:65495335-65495354 None:intergenic 35.0%
TTACAGATGAAGACAACAGT+TGG + Chr4:65495647-65495666 None:intergenic 35.0%
TTCAGCTGAAATTCTTCAAG+TGG - Chr4:65493453-65493472 MsG0480021879.01.T01:intron 35.0%
TTCCTCAAGTCTATAAATGC+AGG + Chr4:65491840-65491859 None:intergenic 35.0%
TTCTATCAACTGTTCACATG+AGG - Chr4:65492055-65492074 MsG0480021879.01.T01:intron 35.0%
TTGATGAATGATGAAGGTCT+GGG - Chr4:65494860-65494879 MsG0480021879.01.T01:intron 35.0%
TTTCCATTCTCCATCTTTGT+GGG - Chr4:65492235-65492254 MsG0480021879.01.T01:intron 35.0%
! AAAAAAAAATAAGAGCGCGG+CGG - Chr4:65495221-65495240 MsG0480021879.01.T01:intron 35.0%
! AAGTGCTATTATTAGAGCAC+AGG - Chr4:65491319-65491338 MsG0480021879.01.T01:intron 35.0%
! AATTCTTCAAGTGGAGCTTT+TGG - Chr4:65493462-65493481 MsG0480021879.01.T01:intron 35.0%
! AATTTACCATGGTCTTTTGC+AGG - Chr4:65493486-65493505 MsG0480021879.01.T01:intron 35.0%
! AGGTGAAGTGATTTGTGTTT+CGG - Chr4:65488419-65488438 MsG0480021879.01.T01:intron 35.0%
! ATGATGGGAAATGCATCAAT+AGG + Chr4:65490262-65490281 None:intergenic 35.0%
! CATCAACTAAACCCAGATTT+TGG + Chr4:65494846-65494865 None:intergenic 35.0%
! CTTTTCTTCCTGTTGATATG+AGG + Chr4:65494304-65494323 None:intergenic 35.0%
! GAAATTGTTGAAACGGGTTT+GGG + Chr4:65495421-65495440 None:intergenic 35.0%
! GACAATCAATTGAGCACTTT+TGG + Chr4:65491801-65491820 None:intergenic 35.0%
! GATTTAAAATTGGAGTCCAG+TGG - Chr4:65491951-65491970 MsG0480021879.01.T01:intron 35.0%
! TCCTTAGAAGACTTCAAGTT+GGG + Chr4:65493703-65493722 None:intergenic 35.0%
! TGAAATTGTTGAAACGGGTT+TGG + Chr4:65495422-65495441 None:intergenic 35.0%
! TGATGAATCCTTTGCCTTTT+GGG + Chr4:65492464-65492483 None:intergenic 35.0%
! TGGACTCCAATTTTAAATCC+TGG + Chr4:65491950-65491969 None:intergenic 35.0%
! TTGATGAATCCTTTGCCTTT+TGG + Chr4:65492465-65492484 None:intergenic 35.0%
! TTTATCTCCGTTACCTGTTT+TGG - Chr4:65493903-65493922 MsG0480021879.01.T01:intron 35.0%
!! ATCGTTTTGGTCCAAAATCT+GGG + Chr4:65493994-65494013 None:intergenic 35.0%
!! ATGCTATTATTTGGTGGGTT+TGG - Chr4:65493419-65493438 MsG0480021879.01.T01:intron 35.0%
!! CTTCAATGGACTAAACTGAA+AGG + Chr4:65490000-65490019 None:intergenic 35.0%
!! GCTTTTGAGAGCTTAAACTT+CGG + Chr4:65494248-65494267 None:intergenic 35.0%
!! TAATAATTAGGGGGTACTGT+TGG - Chr4:65490327-65490346 MsG0480021879.01.T01:intron 35.0%
!! TACTTATGTAGTGTTGATCG+AGG - Chr4:65493597-65493616 MsG0480021879.01.T01:CDS 35.0%
!! TATCGTTTTGGTCCAAAATC+TGG + Chr4:65493995-65494014 None:intergenic 35.0%
!! TGTTGTTGGTGTCAAAGATA+AGG - Chr4:65488275-65488294 MsG0480021879.01.T01:CDS 35.0%
!! TTTGTTTTCAGTCCCATGAT+CGG - Chr4:65489140-65489159 MsG0480021879.01.T01:intron 35.0%
!! TTTTGGGTGATTGTCAAGTT+TGG + Chr4:65492448-65492467 None:intergenic 35.0%
!!! AAGGACACTCATTTTGAAAC+GGG + Chr4:65490162-65490181 None:intergenic 35.0%
!!! ATTTTTTTTTGGTGGTGGTC+AGG - Chr4:65492937-65492956 MsG0480021879.01.T01:intron 35.0%
!!! CAGTTTTTTAGGTTCAGTTC+TGG - Chr4:65489557-65489576 MsG0480021879.01.T01:intron 35.0%
!!! CCGAGTTTTTTAAGAAGATG+AGG + Chr4:65494225-65494244 None:intergenic 35.0%
!!! CTTGTCTTTTGGTTTGAAGT+TGG - Chr4:65489953-65489972 MsG0480021879.01.T01:intron 35.0%
!!! TTTGCGATAATTTTTTGCGC+AGG + Chr4:65488612-65488631 None:intergenic 35.0%
!!! TTTTTTTTTGGTGGTGGTCA+GGG - Chr4:65492938-65492957 MsG0480021879.01.T01:intron 35.0%
AAACTGAAAGGGTAAGGTGA+GGG + Chr4:65489988-65490007 None:intergenic 40.0%
AAATACTTAAATGCCCCCAG+CGG - Chr4:65492797-65492816 MsG0480021879.01.T01:intron 40.0%
AATAATCAGTCTCGCCTGTA+TGG + Chr4:65491085-65491104 None:intergenic 40.0%
AATAGGGCGAGAAACATTAG+CGG - Chr4:65495196-65495215 MsG0480021879.01.T01:intron 40.0%
ACACTATTAAGAGGGAAGGT+AGG + Chr4:65492321-65492340 None:intergenic 40.0%
ACATGAAACGCTCAAATCTG+TGG - Chr4:65490872-65490891 MsG0480021879.01.T01:intron 40.0%
ACCATTAGGTGAATTTGCGA+GGG - Chr4:65495351-65495370 MsG0480021879.01.T01:intron 40.0%
ACCCTGCATTTATAGACTTG+AGG - Chr4:65491835-65491854 MsG0480021879.01.T01:intron 40.0%
ACGACATTCCTCATATCAAC+AGG - Chr4:65494293-65494312 MsG0480021879.01.T01:intron 40.0%
AGAAATTGAACCTTGCGTTG+CGG + Chr4:65487973-65487992 None:intergenic 40.0%
AGAAGATGAGGATGAAGAGA+TGG + Chr4:65494213-65494232 None:intergenic 40.0%
AGAGGATGAAGAGATGGTTA+TGG - Chr4:65494628-65494647 MsG0480021879.01.T01:CDS 40.0%
AGGAAAAAAGTGGAGAGGAA+GGG + Chr4:65491605-65491624 None:intergenic 40.0%
AGGCTGTTAGTCGAGAAATA+AGG - Chr4:65491125-65491144 MsG0480021879.01.T01:intron 40.0%
AGTCTATAAATGCAGGGTTG+TGG + Chr4:65491833-65491852 None:intergenic 40.0%
ATAAATCACGCCATCCATGT+GGG - Chr4:65490064-65490083 MsG0480021879.01.T01:intron 40.0%
CAAAAAACTTCTGCTCTGGT+TGG + Chr4:65489216-65489235 None:intergenic 40.0%
CAAACTGAACTAAACTCACG+AGG - Chr4:65493000-65493019 MsG0480021879.01.T01:intron 40.0%
CAACGATATTCTAATCCTCG+TGG - Chr4:65496516-65496535 MsG0480021879.01.T01:five_prime_UTR 40.0%
CAGGCAATGTATCATACAGA+TGG + Chr4:65496367-65496386 None:intergenic 40.0%
CATCCAGTGCAATGTTGAAT+TGG + Chr4:65491174-65491193 None:intergenic 40.0%
CATGGATAAGTTGTCAAGGA+AGG - Chr4:65491656-65491675 MsG0480021879.01.T01:intron 40.0%
CATGGATGGCGTGATTTATA+TGG + Chr4:65490063-65490082 None:intergenic 40.0%
CGTTCTTCTTCTACTCTGTT+CGG + Chr4:65494276-65494295 None:intergenic 40.0%
CGTTGGAAGACATTAGAAGA+TGG + Chr4:65496186-65496205 None:intergenic 40.0%
CTCCAATCTTCTTCTTTCTC+TGG - Chr4:65495448-65495467 MsG0480021879.01.T01:intron 40.0%
CTCCCAATGCTATTATTTGG+TGG - Chr4:65493413-65493432 MsG0480021879.01.T01:intron 40.0%
GAAGGGACCAAAAAAGGTAA+CGG - Chr4:65494965-65494984 MsG0480021879.01.T01:intron 40.0%
GAATGAACCTATTTGACGAC+TGG - Chr4:65491628-65491647 MsG0480021879.01.T01:intron 40.0%
GACAACACTATTAAGAGGGA+AGG + Chr4:65492325-65492344 None:intergenic 40.0%
GAGGAAAATTGAAGCTGCTA+GGG - Chr4:65491854-65491873 MsG0480021879.01.T01:intron 40.0%
GATGCATGGATAAGTTGTCA+AGG - Chr4:65491652-65491671 MsG0480021879.01.T01:intron 40.0%
GGTTCAAAAAACTTCTGCTC+TGG + Chr4:65489220-65489239 None:intergenic 40.0%
GTATGATACATTGCCTGATG+CGG - Chr4:65496370-65496389 MsG0480021879.01.T01:intron 40.0%
GTTTCCATTCTCCATCTTTG+TGG - Chr4:65492234-65492253 MsG0480021879.01.T01:intron 40.0%
TAAACTGAAAGGGTAAGGTG+AGG + Chr4:65489989-65490008 None:intergenic 40.0%
TAAGAGAAGGAACCAATGTG+CGG - Chr4:65493668-65493687 MsG0480021879.01.T01:CDS 40.0%
TAATTTCCAGCATCTTGGTG+GGG + Chr4:65492412-65492431 None:intergenic 40.0%
TACCATTAGGTGAATTTGCG+AGG - Chr4:65495350-65495369 MsG0480021879.01.T01:intron 40.0%
TATAAATCACGCCATCCATG+TGG - Chr4:65490063-65490082 MsG0480021879.01.T01:intron 40.0%
TATATGCAGGTCTATCCTGA+AGG - Chr4:65489739-65489758 MsG0480021879.01.T01:intron 40.0%
TATCCCACAAAGATGGAGAA+TGG + Chr4:65492241-65492260 None:intergenic 40.0%
TCAAGAGGAAAAAAGTGGAG+AGG + Chr4:65491610-65491629 None:intergenic 40.0%
TGAGGAAAATTGAAGCTGCT+AGG - Chr4:65491853-65491872 MsG0480021879.01.T01:intron 40.0%
TGAGGATGAAGAGATGGTTA+TGG + Chr4:65494207-65494226 None:intergenic 40.0%
TGAGTAGGGACTAATACTCA+GGG + Chr4:65488506-65488525 None:intergenic 40.0%
TGCATAAAATATGCAGGTCC+GGG + Chr4:65492971-65492990 None:intergenic 40.0%
TGCGGTTGTGATAGATGATT+TGG - Chr4:65496388-65496407 MsG0480021879.01.T01:intron 40.0%
TGGACTAAACTGAAAGGGTA+AGG + Chr4:65489994-65490013 None:intergenic 40.0%
TTATGATCCCATGGTTTGAG+AGG - Chr4:65489770-65489789 MsG0480021879.01.T01:intron 40.0%
TTCAATAGGGGTCATGTTGA+AGG + Chr4:65491693-65491712 None:intergenic 40.0%
TTCTCTCAAACCCAATACAC+AGG - Chr4:65491718-65491737 MsG0480021879.01.T01:intron 40.0%
TTGAGTAGGGACTAATACTC+AGG + Chr4:65488507-65488526 None:intergenic 40.0%
! ACGACACTCATTTGAAATGG+AGG - Chr4:65490419-65490438 MsG0480021879.01.T01:intron 40.0%
! AGGTGATGAAAGTGTGATGA+AGG - Chr4:65494718-65494737 MsG0480021879.01.T01:intron 40.0%
! CAAGGTTTTCTTGAATGCAG+AGG - Chr4:65491908-65491927 MsG0480021879.01.T01:intron 40.0%
! CGACACTCATTTGAAATGGA+GGG - Chr4:65490420-65490439 MsG0480021879.01.T01:intron 40.0%
! CTCTAAGTCCAATTTTCACC+TGG + Chr4:65490764-65490783 None:intergenic 40.0%
! GAAAGTATGCGTTCAACTTG+AGG - Chr4:65492718-65492737 MsG0480021879.01.T01:intron 40.0%
! GAGCTTTTGGCAATTTACCA+TGG - Chr4:65493475-65493494 MsG0480021879.01.T01:intron 40.0%
! GCTGATTTAAAGTGAGTTGC+AGG - Chr4:65488399-65488418 MsG0480021879.01.T01:intron 40.0%
! GTTGATGAATGATGAAGGTC+TGG - Chr4:65494859-65494878 MsG0480021879.01.T01:intron 40.0%
! TCCGGCGAAATTGTATTTTC+CGG + Chr4:65494405-65494424 None:intergenic 40.0%
! TTTTGGTCCAAAATCTGGGT+TGG + Chr4:65493990-65494009 None:intergenic 40.0%
! TTTTGTGTCCATGTCTAGTG+TGG - Chr4:65493142-65493161 MsG0480021879.01.T01:intron 40.0%
!! AAGCGGTTGTTGTTTGGTTT+GGG + Chr4:65487940-65487959 None:intergenic 40.0%
!! AAGGGTTTCGATGGGTTATA+GGG + Chr4:65487911-65487930 None:intergenic 40.0%
!! AGTGTTGATCGAGGACATAA+AGG - Chr4:65493606-65493625 MsG0480021879.01.T01:CDS 40.0%
!! ATCGTTTTGGTCCCAAAATC+TGG - Chr4:65494831-65494850 MsG0480021879.01.T01:intron 40.0%
!! CACAAGTTTGACTTTTGGGA+GGG - Chr4:65491207-65491226 MsG0480021879.01.T01:intron 40.0%
!! CCTTAGAAGACTTCAAGTTG+GGG + Chr4:65493702-65493721 None:intergenic 40.0%
!! GAGAGCAGCCTTCTAAAATA+GGG - Chr4:65495180-65495199 MsG0480021879.01.T01:intron 40.0%
!! GTTTCTCGCCCTATTTTAGA+AGG + Chr4:65495191-65495210 None:intergenic 40.0%
!! TCACAAGTTTGACTTTTGGG+AGG - Chr4:65491206-65491225 MsG0480021879.01.T01:intron 40.0%
!! TCGTTTTGGTCCCAAAATCT+GGG - Chr4:65494832-65494851 MsG0480021879.01.T01:intron 40.0%
!! TTCGATAGACCGTTGGTAAT+TGG + Chr4:65490809-65490828 None:intergenic 40.0%
!!! AGGACACTCATTTTGAAACG+GGG + Chr4:65490161-65490180 None:intergenic 40.0%
!!! CGATGGGTTATAGGGTTTTA+GGG + Chr4:65487903-65487922 None:intergenic 40.0%
!!! GCAGTTGGAACTTTTTTCTC+TGG - Chr4:65493728-65493747 MsG0480021879.01.T01:intron 40.0%
!!! TCGATGGGTTATAGGGTTTT+AGG + Chr4:65487904-65487923 None:intergenic 40.0%
AATTTCCAGCATCTTGGTGG+GGG + Chr4:65492411-65492430 None:intergenic 45.0%
ACTCCAAAGACCTGCATACT+TGG - Chr4:65489354-65489373 MsG0480021879.01.T01:intron 45.0%
AGGTCCTGCAAATCAAGGAT+CGG + Chr4:65492669-65492688 None:intergenic 45.0%
ATAGGGCGAGAAACATTAGC+GGG - Chr4:65495197-65495216 MsG0480021879.01.T01:intron 45.0%
ATCGCTGCAATGGTATTTGC+TGG - Chr4:65491473-65491492 MsG0480021879.01.T01:intron 45.0%
CAACAACGTGAAGATCCCAA+AGG - Chr4:65488128-65488147 MsG0480021879.01.T01:CDS 45.0%
CAGTGCAATGTTGAATTGGG+AGG + Chr4:65491170-65491189 None:intergenic 45.0%
CCAATAGGTCCTGCAAATCA+AGG + Chr4:65492674-65492693 None:intergenic 45.0%
CCCCAACTTGAAGTCTTCTA+AGG - Chr4:65493699-65493718 MsG0480021879.01.T01:CDS 45.0%
CTCCAAAGACCTGCATACTT+GGG - Chr4:65489355-65489374 MsG0480021879.01.T01:intron 45.0%
CTCCCAATTCAACATTGCAC+TGG - Chr4:65491168-65491187 MsG0480021879.01.T01:intron 45.0%
GAAGGGACCAAAACAGGTAA+CGG + Chr4:65493913-65493932 None:intergenic 45.0%
GAATTTGCGAGGGAAAACGA+TGG - Chr4:65495361-65495380 MsG0480021879.01.T01:intron 45.0%
GACAATCACCCAAAAGGCAA+AGG - Chr4:65492453-65492472 MsG0480021879.01.T01:intron 45.0%
GAGGAAAAAAGTGGAGAGGA+AGG + Chr4:65491606-65491625 None:intergenic 45.0%
GAGGTCATATCCCACAAAGA+TGG + Chr4:65492248-65492267 None:intergenic 45.0%
GATGAAGACAACAGTTGGGT+TGG + Chr4:65495642-65495661 None:intergenic 45.0%
GATGATTGGGTCATGTGTGA+AGG - Chr4:65489010-65489029 MsG0480021879.01.T01:intron 45.0%
GCACGAACATCATAGATCAC+AGG + Chr4:65489796-65489815 None:intergenic 45.0%
GCATAAAATATGCAGGTCCG+GGG + Chr4:65492970-65492989 None:intergenic 45.0%
GCCGGAAAATACAATTTCGC+CGG - Chr4:65494401-65494420 MsG0480021879.01.T01:intron 45.0%
GGCCAGAGAAAGAAGAAGAT+TGG + Chr4:65495453-65495472 None:intergenic 45.0%
GGGGTATAAAATCCGCACAT+TGG + Chr4:65493683-65493702 None:intergenic 45.0%
GGTGGTAGTAGTAGTAGTAG+CGG + Chr4:65495311-65495330 None:intergenic 45.0%
GTGATGAGAGGATGAAGAGA+TGG - Chr4:65494622-65494641 MsG0480021879.01.T01:CDS 45.0%
GTGCATAAGTAAAGAGGTGG+TGG + Chr4:65495329-65495348 None:intergenic 45.0%
TAAGGCTAGACTCTTGACCA+TGG + Chr4:65496553-65496572 None:intergenic 45.0%
TCAGCTCATTACTCAGAGAG+AGG - Chr4:65490914-65490933 MsG0480021879.01.T01:intron 45.0%
TCATAAGTTCTCCGAAACGG+TGG + Chr4:65495774-65495793 None:intergenic 45.0%
TCATCTATCACAACCGCATC+AGG + Chr4:65496386-65496405 None:intergenic 45.0%
TCCCTCGCAAATTCACCTAA+TGG + Chr4:65495355-65495374 None:intergenic 45.0%
TCTCTGAGTAATGAGCTGAC+TGG + Chr4:65490913-65490932 None:intergenic 45.0%
TCTTCTACTCTGTTCGGTTC+TGG + Chr4:65494270-65494289 None:intergenic 45.0%
TGCATCACCAGTCGTCAAAT+AGG + Chr4:65491638-65491657 None:intergenic 45.0%
TGTATTGGACCCAAGTATGC+AGG + Chr4:65489367-65489386 None:intergenic 45.0%
TTAACGGAAGGGACCAAAAC+AGG + Chr4:65493919-65493938 None:intergenic 45.0%
TTGACGGAAGGGACCAAAAA+AGG - Chr4:65494959-65494978 MsG0480021879.01.T01:intron 45.0%
TTTCGCCGGAGAAGATGATA+TGG - Chr4:65494415-65494434 MsG0480021879.01.T01:intron 45.0%
! AAGTACTGTGACCACCGTTT+CGG - Chr4:65495760-65495779 MsG0480021879.01.T01:intron 45.0%
! AATTCCTTTTCGTCGCAGAG+AGG + Chr4:65492376-65492395 None:intergenic 45.0%
! ACACACACCAACCCAGATTT+TGG - Chr4:65493980-65493999 MsG0480021879.01.T01:intron 45.0%
! ACGGGGGGAGTATATGAAAT+AGG + Chr4:65490144-65490163 None:intergenic 45.0%
! ATTTGACGACTGGTGATGCA+TGG - Chr4:65491638-65491657 MsG0480021879.01.T01:intron 45.0%
! CGAAATTGTATTTTCCGGCG+CGG + Chr4:65494400-65494419 None:intergenic 45.0%
! CTTCTAAGGATTGACGCAGT+TGG - Chr4:65493713-65493732 MsG0480021879.01.T01:intron 45.0%
! GAAGTGCTCTCCACTAAATG+AGG + Chr4:65489823-65489842 None:intergenic 45.0%
! GAGAATTGGTGGTTCAGTTC+AGG + Chr4:65490463-65490482 None:intergenic 45.0%
! GAGGAGTTGTTCTTCTGGAA+GGG - Chr4:65495386-65495405 MsG0480021879.01.T01:intron 45.0%
! TGGTTGAAGCGGTTGTTGTT+TGG + Chr4:65487946-65487965 None:intergenic 45.0%
! TTTTCGTCGCAGAGAGGAAA+GGG + Chr4:65492370-65492389 None:intergenic 45.0%
!! AGCGGTTGTTGTTTGGTTTG+GGG + Chr4:65487939-65487958 None:intergenic 45.0%
!! CATTTAGTGGAGAGCACTTC+AGG - Chr4:65489823-65489842 MsG0480021879.01.T01:intron 45.0%
!! CCTTGATTTGCAGGACCTAT+TGG - Chr4:65492671-65492690 MsG0480021879.01.T01:intron 45.0%
!! GAAGCGGTTGTTGTTTGGTT+TGG + Chr4:65487941-65487960 None:intergenic 45.0%
!! GAAGGGTTTCGATGGGTTAT+AGG + Chr4:65487912-65487931 None:intergenic 45.0%
!! GGAGAGCAGCCTTCTAAAAT+AGG - Chr4:65495179-65495198 MsG0480021879.01.T01:intron 45.0%
!! GTTTGGTTTGGGGGAAAGAA+GGG + Chr4:65487929-65487948 None:intergenic 45.0%
!! TAGACCGTTGGTAATTGGTC+TGG + Chr4:65490804-65490823 None:intergenic 45.0%
!! TGTTTGGTTTGGGGGAAAGA+AGG + Chr4:65487930-65487949 None:intergenic 45.0%
!!! AGGAGTTTTGAATTCCGACG+CGG - Chr4:65494356-65494375 MsG0480021879.01.T01:intron 45.0%
!!! GACACTCATTTTGAAACGGG+GGG + Chr4:65490159-65490178 None:intergenic 45.0%
!!! GGACACTCATTTTGAAACGG+GGG + Chr4:65490160-65490179 None:intergenic 45.0%
!!! AAATAATTTTTTTTTAGTTA+AGG - Chr4:65495007-65495026 MsG0480021879.01.T01:intron 5.0%
!!! AATAATTTTTTTTTAGTTAA+GGG - Chr4:65495008-65495027 MsG0480021879.01.T01:intron 5.0%
!!! ATAAGTAATTTTTTTTTATA+GGG - Chr4:65488842-65488861 MsG0480021879.01.T01:CDS 5.0%
!!! TATAAGTAATTTTTTTTTAT+AGG - Chr4:65488841-65488860 MsG0480021879.01.T01:CDS 5.0%
!!! TATATTTTTTTAAAAAACAA+CGG + Chr4:65491404-65491423 None:intergenic 5.0%
!!! TTTTTTTTGAATTTATTTAA+CGG + Chr4:65493935-65493954 None:intergenic 5.0%
ACCAACGGTCTATCGAACTC+TGG - Chr4:65490812-65490831 MsG0480021879.01.T01:intron 50.0%
AGCAGAAATTCCACCACCAC+CGG + Chr4:65488157-65488176 None:intergenic 50.0%
AGCGGTAGTTAACTACCGCT+GGG + Chr4:65492834-65492815 None:intergenic 50.0%
AGCTGCTAGGGAAATCGCTA+AGG - Chr4:65491866-65491885 MsG0480021879.01.T01:intron 50.0%
AGGAAGCCGTGATCTCCAAA+TGG - Chr4:65489843-65489862 MsG0480021879.01.T01:intron 50.0%
ATCACAGGCCTCTCAAACCA+TGG + Chr4:65489781-65489800 None:intergenic 50.0%
CCAACGGTCTATCGAACTCT+GGG - Chr4:65490813-65490832 MsG0480021879.01.T01:intron 50.0%
CGCCACCATATCATCTTCTC+CGG + Chr4:65494423-65494442 None:intergenic 50.0%
CGTGCCAGACCAATTACCAA+CGG - Chr4:65490797-65490816 MsG0480021879.01.T01:intron 50.0%
CTTTCCTCTCTGCGACGAAA+AGG - Chr4:65492369-65492388 MsG0480021879.01.T01:intron 50.0%
GACCCAAGTATGCAGGTCTT+TGG + Chr4:65489360-65489379 None:intergenic 50.0%
GGAGGAGTTGTTCTTCTGGA+AGG - Chr4:65495385-65495404 MsG0480021879.01.T01:intron 50.0%
GGATCTCTTGCTGAATCTCC+AGG - Chr4:65491929-65491948 MsG0480021879.01.T01:intron 50.0%
GGGGAAAGAAGGGTTTCGAT+GGG + Chr4:65487919-65487938 None:intergenic 50.0%
GGTCCTGCAAATCAAGGATC+GGG + Chr4:65492668-65492687 None:intergenic 50.0%
GTGAAGATCCCAAAGGTTCC+CGG - Chr4:65488135-65488154 MsG0480021879.01.T01:CDS 50.0%
TAATCCTCGTGGGAGAGACT+TGG - Chr4:65496527-65496546 MsG0480021879.01.T01:five_prime_UTR 50.0%
TCACAGGCCTCTCAAACCAT+GGG + Chr4:65489780-65489799 None:intergenic 50.0%
TCGTGCACGACCTCATTTAG+TGG - Chr4:65489810-65489829 MsG0480021879.01.T01:intron 50.0%
TGAAAGGGTAAGGTGAGGGA+AGG + Chr4:65489984-65490003 None:intergenic 50.0%
TGGTGGAGGAGTTGTTCTTC+TGG - Chr4:65495381-65495400 MsG0480021879.01.T01:intron 50.0%
TTTCGTCGCAGAGAGGAAAG+GGG + Chr4:65492369-65492388 None:intergenic 50.0%
TTTGCGAGGGAAAACGATGG+TGG - Chr4:65495364-65495383 MsG0480021879.01.T01:intron 50.0%
! AATTGTATTTTCCGGCGCGG+TGG + Chr4:65494397-65494416 None:intergenic 50.0%
! ATGTGGGCTGTTGACCTTGT+GGG - Chr4:65490080-65490099 MsG0480021879.01.T01:intron 50.0%
! CTTTTCGTCGCAGAGAGGAA+AGG + Chr4:65492371-65492390 None:intergenic 50.0%
!! CGTTGGTAATTGGTCTGGCA+CGG + Chr4:65490799-65490818 None:intergenic 50.0%
!! CTTGGTGGACTTGCTGTGTA+TGG - Chr4:65488195-65488214 MsG0480021879.01.T01:intron 50.0%
!! GAACCCGATCCTTGATTTGC+AGG - Chr4:65492662-65492681 MsG0480021879.01.T01:intron 50.0%
!! GCGGTTGTTGTTTGGTTTGG+GGG + Chr4:65487938-65487957 None:intergenic 50.0%
!! GTTGGTAATTGGTCTGGCAC+GGG + Chr4:65490798-65490817 None:intergenic 50.0%
!!! AGTTTTGAATTCCGACGCGG+TGG - Chr4:65494359-65494378 MsG0480021879.01.T01:intron 50.0%
AAAGTGGAGAGGAAGGGAGC+AGG + Chr4:65491599-65491618 None:intergenic 55.0%
AAGATCCCAAAGGTTCCCGG+TGG - Chr4:65488138-65488157 MsG0480021879.01.T01:CDS 55.0%
AAGTGGAGAGGAAGGGAGCA+GGG + Chr4:65491598-65491617 None:intergenic 55.0%
ACAGCTGCAATGAAGCCAGC+AGG - Chr4:65491235-65491254 MsG0480021879.01.T01:intron 55.0%
AGGTCAACAGCCCACATGGA+TGG + Chr4:65490077-65490096 None:intergenic 55.0%
CACAAGGTCAACAGCCCACA+TGG + Chr4:65490081-65490100 None:intergenic 55.0%
CAGCGGTAGTTAACTACCGC+TGG - Chr4:65492814-65492833 MsG0480021879.01.T01:intron 55.0%
CAGCGGTAGTTAACTACCGC+TGG + Chr4:65492833-65492814 None:intergenic 55.0%
CATGCGTCAGTGTCAGACAC+CGG - Chr4:65488350-65488369 MsG0480021879.01.T01:intron 55.0%
CCCAGAGTTCGATAGACCGT+TGG + Chr4:65490816-65490835 None:intergenic 55.0%
CCTTCGCCTGCAAAAGACCA+TGG + Chr4:65493495-65493514 None:intergenic 55.0%
CGCCGGAGAAGATGATATGG+TGG - Chr4:65494418-65494437 MsG0480021879.01.T01:intron 55.0%
CGGTAGTTAACTACCGCTGG+GGG + Chr4:65492836-65492817 None:intergenic 55.0%
CTTCTTGAGCAGCAACCTGC+TGG + Chr4:65491253-65491272 None:intergenic 55.0%
GAAATCCCCCACCAAGATGC+TGG - Chr4:65492403-65492422 MsG0480021879.01.T01:intron 55.0%
GCAGAAATTCCACCACCACC+GGG + Chr4:65488156-65488175 None:intergenic 55.0%
GCGGTAGTTAACTACCGCTG+GGG + Chr4:65492835-65492816 None:intergenic 55.0%
GGAAAGGGGAGCGGATCATT+TGG + Chr4:65492355-65492374 None:intergenic 55.0%
GGGGGAAAGAAGGGTTTCGA+TGG + Chr4:65487920-65487939 None:intergenic 55.0%
GTTGCGGTGAGTGGTTGAAG+CGG + Chr4:65487957-65487976 None:intergenic 55.0%
! CATGTGGGCTGTTGACCTTG+TGG - Chr4:65490079-65490098 MsG0480021879.01.T01:intron 55.0%
! CCATGGTCTTTTGCAGGCGA+AGG - Chr4:65493492-65493511 MsG0480021879.01.T01:intron 55.0%
ATCCCAAAGGTTCCCGGTGG+TGG - Chr4:65488141-65488160 MsG0480021879.01.T01:CDS 60.0%
ATGGCCAAGTCTCTCCCACG+AGG + Chr4:65496534-65496553 None:intergenic 60.0%
CAACCACTCACCGCAACGCA+AGG - Chr4:65487960-65487979 MsG0480021879.01.T01:intron 60.0%
CACCACCACCGGGAACCTTT+GGG + Chr4:65488146-65488165 None:intergenic 60.0%
GAACCTTGCGTTGCGGTGAG+TGG + Chr4:65487966-65487985 None:intergenic 60.0%
GGTGGTCAGGGTTTGAACCC+CGG - Chr4:65492950-65492969 MsG0480021879.01.T01:intron 60.0%
TCGCAGAGAGGAAAGGGGAG+CGG + Chr4:65492364-65492383 None:intergenic 60.0%
TCGTGGGAGAGACTTGGCCA+TGG - Chr4:65496533-65496552 MsG0480021879.01.T01:five_prime_UTR 60.0%
! GCGAGGGAAAACGATGGTGG+AGG - Chr4:65495367-65495386 MsG0480021879.01.T01:intron 60.0%
CCACCACCACCGGGAACCTT+TGG + Chr4:65488147-65488166 None:intergenic 65.0%
! CCAAAGGTTCCCGGTGGTGG+TGG - Chr4:65488144-65488163 MsG0480021879.01.T01:CDS 65.0%
! GTATTTTCCGGCGCGGTGGC+CGG + Chr4:65494393-65494412 None:intergenic 65.0%
! CGGTGGTGGCACCACCGCGT+CGG + Chr4:65494373-65494392 None:intergenic 75.0%
! TTTTCCGGCGCGGTGGCCGG+TGG + Chr4:65494390-65494409 None:intergenic 75.0%
!! CGACGCGGTGGTGCCACCAC+CGG - Chr4:65494371-65494390 MsG0480021879.01.T01:intron 75.0%
! GCCACCACCGGCCACCGCGC+CGG - Chr4:65494383-65494402 MsG0480021879.01.T01:intron 85.0%
! TCCGGCGCGGTGGCCGGTGG+TGG + Chr4:65494387-65494406 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
Chr4 gene 65487882 65496602 65487882 ID=MsG0480021879.01;Name=MsG0480021879.01
Chr4 mRNA 65487882 65496602 65487882 ID=MsG0480021879.01.T01;Parent=MsG0480021879.01;Name=MsG0480021879.01.T01;_AED=0.45;_eAED=0.45;_QI=100|0.5|0.55|1|0.87|0.88|9|0|316
Chr4 exon 65487882 65487978 65487882 ID=MsG0480021879.01.T01:exon:7962;Parent=MsG0480021879.01.T01
Chr4 exon 65488093 65488164 65488093 ID=MsG0480021879.01.T01:exon:7961;Parent=MsG0480021879.01.T01
Chr4 exon 65488266 65488308 65488266 ID=MsG0480021879.01.T01:exon:7960;Parent=MsG0480021879.01.T01
Chr4 exon 65488723 65488912 65488723 ID=MsG0480021879.01.T01:exon:7959;Parent=MsG0480021879.01.T01
Chr4 exon 65493144 65493227 65493144 ID=MsG0480021879.01.T01:exon:7958;Parent=MsG0480021879.01.T01
Chr4 exon 65493549 65493719 65493549 ID=MsG0480021879.01.T01:exon:7957;Parent=MsG0480021879.01.T01
Chr4 exon 65494620 65494736 65494620 ID=MsG0480021879.01.T01:exon:7956;Parent=MsG0480021879.01.T01
Chr4 exon 65496188 65496364 65496188 ID=MsG0480021879.01.T01:exon:7955;Parent=MsG0480021879.01.T01
Chr4 exon 65496503 65496602 65496503 ID=MsG0480021879.01.T01:exon:7954;Parent=MsG0480021879.01.T01
Chr4 five_prime_UTR 65496503 65496602 65496503 ID=MsG0480021879.01.T01:five_prime_utr;Parent=MsG0480021879.01.T01
Chr4 CDS 65496188 65496364 65496188 ID=MsG0480021879.01.T01:cds;Parent=MsG0480021879.01.T01
Chr4 CDS 65494620 65494736 65494620 ID=MsG0480021879.01.T01:cds;Parent=MsG0480021879.01.T01
Chr4 CDS 65493549 65493719 65493549 ID=MsG0480021879.01.T01:cds;Parent=MsG0480021879.01.T01
Chr4 CDS 65493144 65493227 65493144 ID=MsG0480021879.01.T01:cds;Parent=MsG0480021879.01.T01
Chr4 CDS 65488723 65488912 65488723 ID=MsG0480021879.01.T01:cds;Parent=MsG0480021879.01.T01
Chr4 CDS 65488266 65488308 65488266 ID=MsG0480021879.01.T01:cds;Parent=MsG0480021879.01.T01
Chr4 CDS 65488093 65488164 65488093 ID=MsG0480021879.01.T01:cds;Parent=MsG0480021879.01.T01
Chr4 CDS 65487882 65487978 65487882 ID=MsG0480021879.01.T01:cds;Parent=MsG0480021879.01.T01
Gene Sequence

>MsG0480021879.01.T01

ATGAATTTCAACAACGTGAAGATCCCAAAGGTTCCCGGTGGTGGTGGAATTTCTGCTTTGATTAAAGTTAGCATTCTTGGTGGACTTGCTGTGTATGGAGCTACAAACACTTTGTATAATGTTGAGGGTGGTCATCGTGCTATTGTCTTTAACCGTGTTGTTGGTGTCAAAGATAAGGTCTATCCTGAAGGAACACATATTATGATCCCATGGTTTGAGAGGCCTGTGATCTATGATGTTCGTGCACGACCTCATTTAGTGGAGAGCACTTCAGGAAGCCGTGATCTCCAAATGGTGAAAATTGGACTTAGAGTTCTTACTCGTCCCGTGCCAGACCAATTACCAACGGTCTATCGAACTCTGGGTGAGAATTATAATGAAAGGGTCCTGCCTTCTATTATACATGAAACGCTCAAATCTGTGGTTGCACAGTACAATGCCAGTCAGCTCATTACTCAGAGAGAGGTTGCTGCTCAAGAAGCTGAGAGAGCGAAGTTTGTTGTAGAAAAAGCTGAACAAGACAAAAGAAGTGCTATTATTAGAGCACAGTGGAAAGACTTCACTTCTTTCCAATTTGCATTCAATGTAGCAGCAGATCAGCATCAGCAAATTCATTCCAACCCAACTGTTGTCTTCATCTGTAATCAAAACAGATTAGATTCCAAACCACCTTTTCTTTCTATTGTCAAGCAACAACAACACTCTCATCTTTACTACTTTGAGCTATCTACTGGCATAAGTATGACCCATCTTCTAATGTCTTCCAACGTATACAAAATGAAGTACGTGAATGATGATGAAGATATTAGGAAGTACTTTGCTGCTTCCATCTGTATGATACATTGCCTGATGCGGGTATGCCAACAACGATATTCTAATCCTCGTGGGAGAGACTTGGCCATGGTCAAGAGTCTAGCCTTATGCCACAATGCTATTAACTATGCAAAGTGA
Protein sequence

>MsG0480021879.01.T01

MNFNNVKIPKVPGGGGISALIKVSILGGLAVYGATNTLYNVEGGHRAIVFNRVVGVKDKVYPEGTHIMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVPDQLPTVYRTLGENYNERVLPSIIHETLKSVVAQYNASQLITQREVAAQEAERAKFVVEKAEQDKRSAIIRAQWKDFTSFQFAFNVAADQHQQIHSNPTVVFICNQNRLDSKPPFLSIVKQQQHSHLYYFELSTGISMTHLLMSSNVYKMKYVNDDEDIRKYFAASICMIHCLMRVCQQRYSNPRGRDLAMVKSLALCHNAINYAK*