AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005330.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005330.01.T01 MTR_1g097280 92.966 526 15 2 1 504 1 526 0.0 984
MsG0180005330.01.T01 MTR_3g084040 39.241 79 46 2 31 109 38 114 3.20e-15 73.2
MsG0180005330.01.T01 MTR_7g106440 37.349 83 52 0 31 113 111 193 8.10e-12 66.6
MsG0180005330.01.T01 MTR_7g013740 33.333 90 60 0 17 106 28 117 8.77e-12 63.5
MsG0180005330.01.T01 MTR_7g118120 35.526 76 49 0 31 106 106 181 9.53e-12 67.4
MsG0180005330.01.T01 MTR_2g013130 43.056 72 41 0 31 102 180 251 1.29e-11 67.0
MsG0180005330.01.T01 MTR_4g063560 28.421 95 68 0 11 105 15 109 1.49e-11 61.6
MsG0180005330.01.T01 MTR_4g109540 37.333 75 47 0 31 105 44 118 1.56e-11 65.5
MsG0180005330.01.T01 MTR_2g013130 43.056 72 41 0 31 102 137 208 2.00e-11 65.9
MsG0180005330.01.T01 MTR_4g031680 43.056 72 41 0 31 102 362 433 2.70e-11 66.2
MsG0180005330.01.T01 MTR_3g025880 36.782 87 52 1 20 106 38 121 3.21e-11 65.9
MsG0180005330.01.T01 MTR_2g013130 43.056 72 41 0 31 102 300 371 3.89e-11 65.9
MsG0180005330.01.T01 MTR_2g013130 43.056 72 41 0 31 102 285 356 5.15e-11 65.5
MsG0180005330.01.T01 MTR_1g045510 37.079 89 49 3 24 109 200 284 6.41e-11 63.5
MsG0180005330.01.T01 MTR_3g005670 43.056 72 41 0 31 102 410 481 8.68e-11 64.7
MsG0180005330.01.T01 MTR_3g005670 43.056 72 41 0 31 102 412 483 9.08e-11 64.7
MsG0180005330.01.T01 MTR_3g005670 43.056 72 41 0 31 102 410 481 9.61e-11 64.7
MsG0180005330.01.T01 MTR_3g005670 43.056 72 41 0 31 102 412 483 9.97e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005330.01.T01 AT1G71800 55.346 318 113 6 21 320 1 307 1.17e-101 313
MsG0180005330.01.T01 AT1G60000 38.372 86 52 1 24 109 173 257 4.20e-14 72.8
MsG0180005330.01.T01 AT5G61030 37.975 79 48 1 31 109 42 119 1.23e-12 69.3
MsG0180005330.01.T01 AT5G61030 37.975 79 48 1 31 109 42 119 1.23e-12 69.3
MsG0180005330.01.T01 AT4G00830 35.526 76 49 0 31 106 118 193 9.82e-12 67.8
MsG0180005330.01.T01 AT4G00830 35.526 76 49 0 31 106 118 193 9.82e-12 67.8
MsG0180005330.01.T01 AT4G00830 35.526 76 49 0 31 106 118 193 9.82e-12 67.8
MsG0180005330.01.T01 AT4G00830 35.526 76 49 0 31 106 118 193 1.01e-11 67.4
MsG0180005330.01.T01 AT4G00830 35.526 76 49 0 31 106 118 193 1.01e-11 67.4
MsG0180005330.01.T01 AT4G13850 34.177 79 51 1 31 109 37 114 2.27e-11 61.6
MsG0180005330.01.T01 AT1G60900 43.056 72 41 0 31 102 377 448 3.31e-11 66.2
MsG0180005330.01.T01 AT4G24770 39.474 76 46 0 31 106 246 321 3.32e-11 65.1
MsG0180005330.01.T01 AT4G24770 39.474 76 46 0 31 106 246 321 3.32e-11 65.1
MsG0180005330.01.T01 AT5G50250 36.842 76 48 0 31 106 209 284 3.38e-11 64.7
MsG0180005330.01.T01 AT4G13850 34.177 79 51 1 31 109 37 114 5.46e-11 61.2
MsG0180005330.01.T01 AT3G23830 36.000 75 48 0 31 105 37 111 5.64e-11 60.8
MsG0180005330.01.T01 AT3G23830 36.000 75 48 0 31 105 37 111 5.64e-11 60.8
MsG0180005330.01.T01 AT4G13850 34.177 79 51 1 31 109 37 114 6.63e-11 61.2
MsG0180005330.01.T01 AT4G13850 34.177 79 51 1 31 109 37 114 7.37e-11 61.2

Find 151 sgRNAs with CRISPR-Local

Find 454 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCTTCCTCTCGATTTCA+TGG 0.176899 1:-90416969 MsG0180005330.01.T01:CDS
TAGCTGACTCCTGGACATTT+TGG 0.227036 1:+90415108 None:intergenic
GATGGTCGTGTAAAGGATTC+TGG 0.241286 1:+90411682 None:intergenic
CTCGCCAGCTGTTGCTTTCA+AGG 0.246532 1:-90414954 MsG0180005330.01.T01:CDS
TTGGCCAGATGCAAAGTTAA+AGG 0.247257 1:+90415127 None:intergenic
CTTCAGGGTTATGAAATTAA+TGG 0.257732 1:-90416490 MsG0180005330.01.T01:CDS
ACTTGGCCTTCTTGAATATA+AGG 0.269471 1:+90412701 None:intergenic
AAATATTCCAACGTATCTTT+TGG 0.284066 1:-90411736 MsG0180005330.01.T01:CDS
AAGTGCTCGTAGGAATCTTC+AGG 0.314118 1:-90416506 MsG0180005330.01.T01:CDS
TTAGTTACTGATAGAGAAAC+TGG 0.317848 1:-90416580 MsG0180005330.01.T01:CDS
GGAATATTTACTACTACTTT+TGG 0.323679 1:+90411750 None:intergenic
CAGAGGAGGCTCTGGATTTA+CGG 0.332685 1:+90412637 None:intergenic
TTTGATCTGAAACTTGTCTA+AGG 0.334318 1:+90412837 None:intergenic
TTCAATCTAGTGAGCTTTGA+TGG 0.338386 1:+90411664 None:intergenic
TCCCAACATCGCACTGTCTT+TGG 0.343999 1:-90416935 MsG0180005330.01.T01:intron
GATTTCGCGGAGAATGATAA+AGG 0.353032 1:-90416451 MsG0180005330.01.T01:CDS
GTGGCTGGTCTACCTCCTTA+TGG 0.363208 1:-90412752 MsG0180005330.01.T01:CDS
GACGGAAGGGGTCTCTCTGC+TGG 0.371801 1:-90411640 MsG0180005330.01.T01:CDS
TGATCCTTTAACTTTGCATC+TGG 0.378313 1:-90415131 MsG0180005330.01.T01:CDS
GGCATCCCGTCAAATCAAAA+TGG 0.382688 1:-90415181 MsG0180005330.01.T01:CDS
GAGTGCCGCACATCTGCTTT+AGG 0.383249 1:+90411544 None:intergenic
TGAGATAATCTCAGAGCTTA+AGG 0.385361 1:-90415083 MsG0180005330.01.T01:intron
GCTGGCCCCTCCATGCCATC+TGG 0.387717 1:-90411832 MsG0180005330.01.T01:CDS
TTCCAACGCTCTTGAGGATT+GGG 0.393799 1:-90411773 MsG0180005330.01.T01:CDS
CTGCTCCAGGCTGTACAAAA+TGG 0.394055 1:+90412579 None:intergenic
TCTGAAACTTGTCTAAGGTT+TGG 0.398069 1:+90412842 None:intergenic
GTTGAATTTGCCTGTTGAAA+TGG 0.398282 1:+90412491 None:intergenic
CTTCCAACGCTCTTGAGGAT+TGG 0.405295 1:-90411774 MsG0180005330.01.T01:CDS
TGTTTCACATAATATTCATA+TGG 0.411070 1:-90412405 MsG0180005330.01.T01:intron
GAAACGAGGCATGCGGTTGC+TGG 0.411669 1:+90412459 None:intergenic
GGACAGAGCAAGTTGCAGTT+TGG 0.411864 1:-90412731 MsG0180005330.01.T01:CDS
AAAGATCCTCAGAAACAATT+AGG 0.419942 1:-90415319 MsG0180005330.01.T01:intron
AACGGATCATCCCTTGTTCT+CGG 0.424227 1:-90411595 MsG0180005330.01.T01:CDS
TGTTAGGCCTCCATTTCAAC+AGG 0.426679 1:-90412501 MsG0180005330.01.T01:CDS
CTGGGCTGCAGAGGAGGCTC+TGG 0.428231 1:+90412629 None:intergenic
GTAGTAAAGAGGAAGAAGAT+TGG 0.428537 1:-90417007 MsG0180005330.01.T01:CDS
CATGACAGTTGCAGCTGTTA+CGG 0.434365 1:+90415231 None:intergenic
TGCTACAGAGGAACAGCTTA+AGG 0.435110 1:-90416791 MsG0180005330.01.T01:CDS
TTACGGATTCTGTGAGTATA+CGG 0.438452 1:-90416545 MsG0180005330.01.T01:CDS
CTAGGAACTGAAGGGTTATG+AGG 0.441421 1:+90412668 None:intergenic
TTCTCTTCTTCGTCGAAGAT+CGG 0.441601 1:-90417064 MsG0180005330.01.T01:five_prime_UTR
AGGGATGATCCGTTGGAAAC+AGG 0.441675 1:+90411604 None:intergenic
AGCAGCTCAACATCAACCTA+TGG 0.442434 1:-90415266 MsG0180005330.01.T01:CDS
GCGGATTCCCCTTGAACAGC+TGG 0.443023 1:+90415292 None:intergenic
GAAACAAAACATACCATTTG+AGG 0.444720 1:+90413114 None:intergenic
AGTTACCTAAAACTTATAAC+AGG 0.450631 1:+90416748 None:intergenic
TGCAACTTGCTCTGTCCATA+AGG 0.455902 1:+90412737 None:intergenic
GCTCTAGGTGGTGCTCAGAC+TGG 0.462210 1:-90415202 MsG0180005330.01.T01:CDS
ACCAAAGACAGTGCGATGTT+GGG 0.470255 1:+90416934 None:intergenic
AAATTACTCTGCCCTGCTCC+AGG 0.474984 1:+90412566 None:intergenic
GGAATTCTGGGCTGCAGAGG+AGG 0.474994 1:+90412623 None:intergenic
TTAGGCATCCCAGCTGTTCA+AGG 0.483235 1:-90415301 MsG0180005330.01.T01:CDS
TATGAGGGAGAGTGCTGACT+TGG 0.485477 1:+90412684 None:intergenic
TACCAAAGACAGTGCGATGT+TGG 0.485985 1:+90416933 None:intergenic
AACAGCTTAAGGAAATTTGT+CGG 0.492117 1:-90416780 MsG0180005330.01.T01:CDS
TCACAGAATCCGTAACCCTT+AGG 0.492474 1:+90416553 None:intergenic
ACATTGGTTCCGACTGTGGC+TGG 0.494341 1:-90412767 MsG0180005330.01.T01:CDS
TAGAGAAACTGGGAAACCTA+AGG 0.494630 1:-90416569 MsG0180005330.01.T01:CDS
ATTTCGCGGAGAATGATAAA+GGG 0.497809 1:-90416450 MsG0180005330.01.T01:CDS
TATCTCAGATAGCTGACTCC+TGG 0.499165 1:+90415099 None:intergenic
GAATGATAGAAATAAAGATC+AGG 0.504557 1:-90416428 MsG0180005330.01.T01:intron
ACAGCTTAAGGAAATTTGTC+GGG 0.507959 1:-90416779 MsG0180005330.01.T01:CDS
AGGGATGGTCAACCCTCAAA+TGG 0.511686 1:-90413127 MsG0180005330.01.T01:intron
CGGAACGGAGAGTGTGGTGG+TGG 0.512595 1:-90417044 MsG0180005330.01.T01:five_prime_UTR
GAGCTTTGATGGTCGTGTAA+AGG 0.516650 1:+90411675 None:intergenic
TTGCAGGCTCAGATAATGCT+AGG 0.516928 1:-90413147 MsG0180005330.01.T01:intron
AAACAAAACATACCATTTGA+GGG 0.517549 1:+90413115 None:intergenic
GTTGAGCTTCCAACACGTAC+TGG 0.519605 1:+90412428 None:intergenic
GCTTTAGGAACTACAGGTAC+AGG 0.520667 1:+90411559 None:intergenic
TCAATTACGTGTTGATTTCG+CGG 0.523375 1:-90416464 MsG0180005330.01.T01:CDS
TGCATCTGGCCAAAATGTCC+AGG 0.526981 1:-90415117 MsG0180005330.01.T01:CDS
TCTCAGTTATTTAGCAAGGA+AGG 0.527111 1:-90411805 MsG0180005330.01.T01:CDS
ACTGGGAAACCTAAGGGTTA+CGG 0.530546 1:-90416562 MsG0180005330.01.T01:CDS
CTCTGATCAACAATCTTCAC+AGG 0.531715 1:-90411524 MsG0180005330.01.T01:CDS
ACATCTGCTTTAGGAACTAC+AGG 0.532755 1:+90411553 None:intergenic
TTCAAGGCCACAGTTGCCCA+AGG 0.536874 1:-90414938 MsG0180005330.01.T01:CDS
ACGGAAGGGGTCTCTCTGCT+GGG 0.537514 1:-90411639 MsG0180005330.01.T01:CDS
ATGAGCTACTTCCGAGAACA+AGG 0.538050 1:+90411584 None:intergenic
TTGACACCTTATATTCAAGA+AGG 0.544580 1:-90412707 MsG0180005330.01.T01:CDS
GGTGGTGGAACAAACGCTTA+TGG 0.549732 1:-90417029 MsG0180005330.01.T01:exon
TCGCAGTCTTTAATGAATGA+AGG 0.549830 1:-90412812 MsG0180005330.01.T01:CDS
GTAAAGAGGAAGAAGATTGG+AGG 0.552792 1:-90417004 MsG0180005330.01.T01:CDS
AAGGAAATTTGTCGGGAGGT+TGG 0.553535 1:-90416772 MsG0180005330.01.T01:CDS
GTCAATTGACTAGGAACTGA+AGG 0.554552 1:+90412659 None:intergenic
TAGACCTTCCAACGCTCTTG+AGG 0.555033 1:-90411779 MsG0180005330.01.T01:CDS
CTGAGAAACACCAGATGGCA+TGG 0.559268 1:+90411822 None:intergenic
GATCTTCGACGAAGAAGAGA+AGG 0.559351 1:+90417066 None:intergenic
CGGATTCCCCTTGAACAGCT+GGG 0.559565 1:+90415293 None:intergenic
GTGGCCTTGAAAGCAACAGC+TGG 0.561370 1:+90414950 None:intergenic
GGCCCAATCCTCAAGAGCGT+TGG 0.563373 1:+90411771 None:intergenic
CCATGAAATCGAGAGGAAGA+AGG 0.564276 1:+90416969 None:intergenic
CTCTACTCCAAAAGATACGT+TGG 0.564688 1:+90411729 None:intergenic
CACTAGATTGAATGACGGAA+GGG 0.565314 1:-90411653 MsG0180005330.01.T01:CDS
GAAACACCAGATGGCATGGA+GGG 0.566701 1:+90411826 None:intergenic
ACTGTCATGACTGCAGCTCT+AGG 0.569230 1:-90415217 MsG0180005330.01.T01:CDS
TAGGCATCCCAGCTGTTCAA+GGG 0.569589 1:-90415300 MsG0180005330.01.T01:CDS
GGATTTACGGTCAATTGACT+AGG 0.570256 1:+90412650 None:intergenic
GAGAACAAGGGATGATCCGT+TGG 0.571064 1:+90411597 None:intergenic
TGGTTGCTTTGATGATGTTG+AGG 0.572185 1:+90412599 None:intergenic
GGTTGCTTTGATGATGTTGA+GGG 0.575174 1:+90412600 None:intergenic
TGTTCCTCTGTAGCATCATA+CGG 0.577567 1:+90416799 None:intergenic
TGCAGGCTCAGATAATGCTA+GGG 0.580236 1:-90413146 MsG0180005330.01.T01:intron
TTAATGAATGAAGGCCACCT+TGG 0.580341 1:-90412803 MsG0180005330.01.T01:CDS
GCAAACATTGGTTCCGACTG+TGG 0.580561 1:-90412771 MsG0180005330.01.T01:CDS
TAGGAACTGAAGGGTTATGA+GGG 0.582212 1:+90412669 None:intergenic
AGAGAAACTGGGAAACCTAA+GGG 0.583753 1:-90416568 MsG0180005330.01.T01:CDS
AAACGCTTATGGTAGTAAAG+AGG 0.588404 1:-90417018 MsG0180005330.01.T01:exon
AAAAGGGCCTTGGGCAACTG+TGG 0.590501 1:+90414931 None:intergenic
GGCTCAGATAATGCTAGGGA+TGG 0.592888 1:-90413142 MsG0180005330.01.T01:CDS
GCAGCTCAACATCAACCTAT+GGG 0.597807 1:-90415265 MsG0180005330.01.T01:CDS
TGGAGTAGAGAATACAGGCA+TGG 0.598088 1:-90411716 MsG0180005330.01.T01:CDS
TGTTTCTCAGTTATTTAGCA+AGG 0.599326 1:-90411809 MsG0180005330.01.T01:CDS
AGTGCTCGTAGGAATCTTCA+GGG 0.600126 1:-90416505 MsG0180005330.01.T01:CDS
TTGCTTTGATGATGTTGAGG+GGG 0.603891 1:+90412602 None:intergenic
ACTAGATTGAATGACGGAAG+GGG 0.604842 1:-90411652 MsG0180005330.01.T01:CDS
TCACTAGATTGAATGACGGA+AGG 0.606926 1:-90411654 MsG0180005330.01.T01:CDS
AAACACCAGATGGCATGGAG+GGG 0.611101 1:+90411827 None:intergenic
CTACAACAACCAGTACGTGT+TGG 0.613176 1:-90412437 MsG0180005330.01.T01:CDS
ATCTTCGACGAAGAAGAGAA+GGG 0.613914 1:+90417067 None:intergenic
GAATTTGCCTGTTGAAATGG+AGG 0.624335 1:+90412494 None:intergenic
TGGTCAGACTCAGCAAACAT+TGG 0.627121 1:-90412783 MsG0180005330.01.T01:CDS
ACAGTGCGATGTTGGGACTG+AGG 0.628763 1:+90416941 None:intergenic
GGAGGTAGACCAGCCACAGT+CGG 0.632403 1:+90412758 None:intergenic
AGGCATCCCAGCTGTTCAAG+GGG 0.635455 1:-90415299 MsG0180005330.01.T01:CDS
GGGAATGGCTACACACAACA+AGG 0.638010 1:-90414983 MsG0180005330.01.T01:CDS
CAATCCTCAAGAGCGTTGGA+AGG 0.638608 1:+90411775 None:intergenic
GCTTAAGGAAATTTGTCGGG+AGG 0.640077 1:-90416776 MsG0180005330.01.T01:CDS
AAACAGCGTTAAGTGCTCGT+AGG 0.641785 1:-90416516 MsG0180005330.01.T01:CDS
ACGGCAATATGAAGACCCAT+AGG 0.645378 1:+90415250 None:intergenic
GAAGATCGGAACGGAGAGTG+TGG 0.646474 1:-90417050 MsG0180005330.01.T01:five_prime_UTR
AAGCTCACTAGATTGAATGA+CGG 0.654821 1:-90411658 MsG0180005330.01.T01:CDS
TCAGACGTACCTGTTTCCAA+CGG 0.662727 1:-90411613 MsG0180005330.01.T01:CDS
TTGATGTTGAGCTGCTTGAG+CGG 0.668086 1:+90415273 None:intergenic
GATCGGAACGGAGAGTGTGG+TGG 0.668884 1:-90417047 MsG0180005330.01.T01:five_prime_UTR
TCAATTGACTAGGAACTGAA+GGG 0.671116 1:+90412660 None:intergenic
AGAAACACCAGATGGCATGG+AGG 0.671498 1:+90411825 None:intergenic
GGAGCAGCCATGAAATCGAG+AGG 0.676685 1:+90416962 None:intergenic
TTCATTCATTAAAGACTGCG+AGG 0.678400 1:+90412814 None:intergenic
AACTTGCTCTGTCCATAAGG+AGG 0.678416 1:+90412740 None:intergenic
TTCTTCGTCGAAGATCGGAA+CGG 0.680244 1:-90417059 MsG0180005330.01.T01:five_prime_UTR
TACTGGTTGTTGTAGAAACG+AGG 0.682309 1:+90412445 None:intergenic
AATAACTGAGAAACACCAGA+TGG 0.684873 1:+90411817 None:intergenic
TGTTGTAGAAACGAGGCATG+CGG 0.697168 1:+90412452 None:intergenic
GTCATGACTGCAGCTCTAGG+TGG 0.698596 1:-90415214 MsG0180005330.01.T01:CDS
TAGTTACTGATAGAGAAACT+GGG 0.706301 1:-90416579 MsG0180005330.01.T01:CDS
TAGTTCCTAAAGCAGATGTG+CGG 0.707036 1:-90411549 MsG0180005330.01.T01:CDS
GTTGCTTTGATGATGTTGAG+GGG 0.707097 1:+90412601 None:intergenic
TGAGCTACTTCCGAGAACAA+GGG 0.709415 1:+90411585 None:intergenic
CATACCGTATGATGCTACAG+AGG 0.722663 1:-90416803 MsG0180005330.01.T01:CDS
TTTGCTGAGTCTGACCAAGG+TGG 0.729027 1:+90412789 None:intergenic
ATGTTTGCTGAGTCTGACCA+AGG 0.742426 1:+90412786 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACTAAATCATATATAAAT+AGG + Chr1:90415391-90415410 None:intergenic 10.0%
!!! AAAAAATTGATTTTTTATGT+TGG - Chr1:90411998-90412017 MsG0180005330.01.T01:intron 10.0%
!!! AAAAATTGATTTTTTATGTT+GGG - Chr1:90411999-90412018 MsG0180005330.01.T01:intron 10.0%
!!! ATTTGTTTTATGTTAAAAAA+AGG - Chr1:90411933-90411952 MsG0180005330.01.T01:intron 10.0%
!! AAAACTATTATATAGATAGA+TGG + Chr1:90415072-90415091 None:intergenic 15.0%
!! AAACATTAATCTCTAAATAT+AGG + Chr1:90415421-90415440 None:intergenic 15.0%
!! AAATTGAAAAATATGAACAA+AGG + Chr1:90414419-90414438 None:intergenic 15.0%
!! TAATACAATTTACATTTACT+AGG - Chr1:90414695-90414714 MsG0180005330.01.T01:intron 15.0%
!!! TATATATGATTTAGTTTCAT+TGG - Chr1:90415394-90415413 MsG0180005330.01.T01:intron 15.0%
!!! TATTGATAACTCAATTTAAT+TGG + Chr1:90412930-90412949 None:intergenic 15.0%
!!! TTTTTTTTTTGAGAAAGTAA+TGG - Chr1:90416653-90416672 MsG0180005330.01.T01:intron 15.0%
!! AAAATAACACAAGCAAAATT+TGG + Chr1:90416281-90416300 None:intergenic 20.0%
!! ACTTTATTGAATATAGAGTT+TGG - Chr1:90415332-90415351 MsG0180005330.01.T01:intron 20.0%
!! ATGTTATAAATTCCTTTGTT+TGG + Chr1:90412429-90412448 None:intergenic 20.0%
!! ATTCGTCTATTTATAGAATA+GGG - Chr1:90415226-90415245 MsG0180005330.01.T01:CDS 20.0%
!! CCAAGATTATTGTAAATATA+GGG - Chr1:90414541-90414560 MsG0180005330.01.T01:intron 20.0%
!! CCTATATTTACAATAATCTT+GGG + Chr1:90414543-90414562 None:intergenic 20.0%
!! CTTTATTGAATATAGAGTTT+GGG - Chr1:90415333-90415352 MsG0180005330.01.T01:intron 20.0%
!! TAACGGTAAAAAGAAAAAAA+AGG + Chr1:90413296-90413315 None:intergenic 20.0%
!! TAAGAACAAAAACAAAAGAT+AGG + Chr1:90411741-90411760 None:intergenic 20.0%
!! TGGAATTTAATCAAGAAAAA+AGG + Chr1:90415550-90415569 None:intergenic 20.0%
!! TGTTTCACATAATATTCATA+TGG - Chr1:90416229-90416248 MsG0180005330.01.T01:intron 20.0%
!! TTGGAATTAGTATTAGTATT+GGG + Chr1:90414820-90414839 None:intergenic 20.0%
!!! ATAGTTTTATACCTGAAAAA+GGG + Chr1:90413722-90413741 None:intergenic 20.0%
!!! ATATGAAATTGATTTCACAT+TGG - Chr1:90412868-90412887 MsG0180005330.01.T01:intron 20.0%
!!! TATAGTTTTATACCTGAAAA+AGG + Chr1:90413723-90413742 None:intergenic 20.0%
!!! TGAAGGATAATTATTTTGTA+AGG + Chr1:90412680-90412699 None:intergenic 20.0%
!!! TGTTATAAATTCCTTTGTTT+GGG + Chr1:90412428-90412447 None:intergenic 20.0%
!!! TTACATTTTTTTGTAATTGC+AGG - Chr1:90415471-90415490 MsG0180005330.01.T01:intron 20.0%
!!! TTGATTAAATTCCATTTTCA+TGG - Chr1:90415556-90415575 MsG0180005330.01.T01:intron 20.0%
! AAAAAATCTTTCTATCTGTC+TGG + Chr1:90414366-90414385 None:intergenic 25.0%
! AAACAAAACATACCATTTGA+GGG + Chr1:90415522-90415541 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG + Chr1:90414120-90414139 None:intergenic 25.0%
! AAGAATTTGTAAATAGAGAC+AGG + Chr1:90413809-90413828 None:intergenic 25.0%
! ACAAAAATTTGCCATGAAAA+TGG + Chr1:90415570-90415589 None:intergenic 25.0%
! AGTTACCTAAAACTTATAAC+AGG + Chr1:90411889-90411908 None:intergenic 25.0%
! ATAAAGATCAGGTATATTGT+TGG - Chr1:90412217-90412236 MsG0180005330.01.T01:intron 25.0%
! ATAACGACAAAATCTAACTT+GGG + Chr1:90415286-90415305 None:intergenic 25.0%
! ATCCTTCATTAATGTTTCAA+TGG - Chr1:90412692-90412711 MsG0180005330.01.T01:CDS 25.0%
! CATTCGTCTATTTATAGAAT+AGG - Chr1:90415225-90415244 MsG0180005330.01.T01:CDS 25.0%
! CCCAAGATTATTGTAAATAT+AGG - Chr1:90414540-90414559 MsG0180005330.01.T01:intron 25.0%
! CCCTATATTTACAATAATCT+TGG + Chr1:90414544-90414563 None:intergenic 25.0%
! CCTAACTTCATTTATTAAAC+AGG - Chr1:90416780-90416799 MsG0180005330.01.T01:CDS 25.0%
! CCTGTTTAATAAATGAAGTT+AGG + Chr1:90416783-90416802 None:intergenic 25.0%
! GAATGATAGAAATAAAGATC+AGG - Chr1:90412206-90412225 MsG0180005330.01.T01:intron 25.0%
! GTATGTCTTTACAAAAAGTT+AGG + Chr1:90412511-90412530 None:intergenic 25.0%
! GTTGGAATTAGTATTAGTAT+TGG + Chr1:90414821-90414840 None:intergenic 25.0%
! TACCATTGAAACATTAATGA+AGG + Chr1:90412697-90412716 None:intergenic 25.0%
!! AAATATTCCAACGTATCTTT+TGG - Chr1:90416898-90416917 MsG0180005330.01.T01:intron 25.0%
!! ATCTTTGCATTGTTTTCTTT+TGG - Chr1:90412263-90412282 MsG0180005330.01.T01:intron 25.0%
!! ATGACTTAGGATTTGATTTA+GGG - Chr1:90415595-90415614 MsG0180005330.01.T01:intron 25.0%
!! GGAATATTTACTACTACTTT+TGG + Chr1:90416887-90416906 None:intergenic 25.0%
!! TCTTTGCATTGTTTTCTTTT+GGG - Chr1:90412264-90412283 MsG0180005330.01.T01:intron 25.0%
!! TTTTATGTGTTTGTAGTTGT+GGG - Chr1:90411958-90411977 MsG0180005330.01.T01:intron 25.0%
!! TTTTCTAATGGTTTCTCTAA+TGG - Chr1:90414127-90414146 MsG0180005330.01.T01:intron 25.0%
!! TTTTGCATGTAGTATATACT+TGG + Chr1:90416679-90416698 None:intergenic 25.0%
!! TTTTTATGTGTTTGTAGTTG+TGG - Chr1:90411957-90411976 MsG0180005330.01.T01:intron 25.0%
!!! CTATTATTTTTGTAACAGCT+TGG + Chr1:90412959-90412978 None:intergenic 25.0%
!!! CTGTCTGGTTTTTTTTTTTT+TGG + Chr1:90414351-90414370 None:intergenic 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG + Chr1:90414262-90414281 None:intergenic 25.0%
!!! TTACGACAATTTTTCTAGTT+GGG - Chr1:90411806-90411825 MsG0180005330.01.T01:CDS 25.0%
!!! TTGTATGTTTTAGATTTCCT+TGG - Chr1:90413827-90413846 MsG0180005330.01.T01:intron 25.0%
!!! TTTACGACAATTTTTCTAGT+TGG - Chr1:90411805-90411824 MsG0180005330.01.T01:CDS 25.0%
AAAGATCCTCAGAAACAATT+AGG - Chr1:90413315-90413334 MsG0180005330.01.T01:intron 30.0%
AAAGGAGAAAATGAAAACAC+AGG + Chr1:90413278-90413297 None:intergenic 30.0%
AACAGCTTAAGGAAATTTGT+CGG - Chr1:90411854-90411873 MsG0180005330.01.T01:intron 30.0%
ACTTCATTTATTAAACAGGC+TGG - Chr1:90416784-90416803 MsG0180005330.01.T01:CDS 30.0%
AGAGAGATCAGAAATAACTT+AGG + Chr1:90415261-90415280 None:intergenic 30.0%
AGTCAAGAAAAAGATTATCC+AGG + Chr1:90413608-90413627 None:intergenic 30.0%
ATGCACAAAGGAATTGAAAT+GGG + Chr1:90413755-90413774 None:intergenic 30.0%
ATGTTGAAATCTGACCTTAA+AGG - Chr1:90414469-90414488 MsG0180005330.01.T01:intron 30.0%
ATTGTATTTACTATTCCCCA+TGG - Chr1:90412572-90412591 MsG0180005330.01.T01:CDS 30.0%
CAAAAATATCTACTCTTCAG+AGG + Chr1:90415733-90415752 None:intergenic 30.0%
CAAACATATAGTCAGAATGA+AGG + Chr1:90413944-90413963 None:intergenic 30.0%
CAGAGGCAGTAATAAAATAT+TGG + Chr1:90415716-90415735 None:intergenic 30.0%
CATAACGACAAAATCTAACT+TGG + Chr1:90415287-90415306 None:intergenic 30.0%
CCTAGAAAAAAAGCAACATT+TGG + Chr1:90414907-90414926 None:intergenic 30.0%
CTAAATCAAATCCTAAGTCA+TGG + Chr1:90415596-90415615 None:intergenic 30.0%
CTCACATTGATCAATATGTT+TGG + Chr1:90412813-90412832 None:intergenic 30.0%
CTTCAGGGTTATGAAATTAA+TGG - Chr1:90412144-90412163 MsG0180005330.01.T01:intron 30.0%
GAAACAAAACATACCATTTG+AGG + Chr1:90415523-90415542 None:intergenic 30.0%
GCAAAAGAAGAATGAATCAT+TGG - Chr1:90414389-90414408 MsG0180005330.01.T01:intron 30.0%
GGTTAAAACTTTCAACTTAG+AGG + Chr1:90415370-90415389 None:intergenic 30.0%
GTTCTATCAAAGACCATATT+TGG - Chr1:90414080-90414099 MsG0180005330.01.T01:intron 30.0%
TAGTTACTGATAGAGAAACT+GGG - Chr1:90412055-90412074 MsG0180005330.01.T01:intron 30.0%
TATAAATAGACGAATGCTCA+AGG + Chr1:90415221-90415240 None:intergenic 30.0%
TGGTCTTTGATAGAACATTA+TGG + Chr1:90414076-90414095 None:intergenic 30.0%
TGTTCAAAACACTCAAATCT+AGG + Chr1:90416324-90416343 None:intergenic 30.0%
TGTTTCTCAGTTATTTAGCA+AGG - Chr1:90416825-90416844 MsG0180005330.01.T01:intron 30.0%
TTAGAATGTACTACGCATTT+AGG - Chr1:90416371-90416390 MsG0180005330.01.T01:intron 30.0%
TTAGTTACTGATAGAGAAAC+TGG - Chr1:90412054-90412073 MsG0180005330.01.T01:intron 30.0%
TTGACACCTTATATTCAAGA+AGG - Chr1:90415927-90415946 MsG0180005330.01.T01:intron 30.0%
TTGGATATTCTCTAGATTCA+TGG - Chr1:90414751-90414770 MsG0180005330.01.T01:intron 30.0%
TTTGAACACACAATTGTTCT+GGG - Chr1:90415138-90415157 MsG0180005330.01.T01:CDS 30.0%
! ATTTTTGTCATCCATGACTT+AGG - Chr1:90415582-90415601 MsG0180005330.01.T01:intron 30.0%
! CATGACTTAGGATTTGATTT+AGG - Chr1:90415594-90415613 MsG0180005330.01.T01:intron 30.0%
! GAATAGTAACTGTTTCCTTT+TGG + Chr1:90412837-90412856 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG - Chr1:90414115-90414134 MsG0180005330.01.T01:intron 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG - Chr1:90414137-90414156 MsG0180005330.01.T01:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG - Chr1:90414266-90414285 MsG0180005330.01.T01:intron 30.0%
! TTCCTTTTTCTTTTACTGCA+GGG - Chr1:90413144-90413163 MsG0180005330.01.T01:CDS 30.0%
! TTGGTCCTGTTATAAGTTTT+AGG - Chr1:90411881-90411900 MsG0180005330.01.T01:intron 30.0%
! TTTGATCTGAAACTTGTCTA+AGG + Chr1:90415800-90415819 None:intergenic 30.0%
!! AGGAACATTTTAATCCATGA+TGG + Chr1:90413129-90413148 None:intergenic 30.0%
!! CTTGTTTGTTGTTGTTATGA+TGG - Chr1:90413626-90413645 MsG0180005330.01.T01:intron 30.0%
!! GAGTGTTTTGAACAATGTAT+GGG - Chr1:90416330-90416349 MsG0180005330.01.T01:intron 30.0%
!! TGAGTGTTTTGAACAATGTA+TGG - Chr1:90416329-90416348 MsG0180005330.01.T01:intron 30.0%
!! TTGTATGTTTTAGATGTCCT+TGG - Chr1:90413911-90413930 MsG0180005330.01.T01:intron 30.0%
!! TTGTTTCTGAGGATCTTTAA+CGG + Chr1:90413313-90413332 None:intergenic 30.0%
!!! AAGCTAACTTCTTTTTTTCC+TGG - Chr1:90413587-90413606 MsG0180005330.01.T01:intron 30.0%
!!! ATATTTTAACCGCGTTTGTA+TGG - Chr1:90416424-90416443 MsG0180005330.01.T01:intron 30.0%
!!! CCAAATGTTGCTTTTTTTCT+AGG - Chr1:90414904-90414923 MsG0180005330.01.T01:intron 30.0%
!!! GTTTTCTTTTGGGTTTTGTT+AGG - Chr1:90412274-90412293 MsG0180005330.01.T01:intron 30.0%
!!! TGCAAACCATTTTGATTTGA+CGG + Chr1:90413462-90413481 None:intergenic 30.0%
!!! TTTTTAAAGCTCCCAAACAA+AGG - Chr1:90412414-90412433 MsG0180005330.01.T01:CDS 30.0%
AAACGCTTATGGTAGTAAAG+AGG - Chr1:90411616-90411635 MsG0180005330.01.T01:CDS 35.0%
AAATGGCTCATAATTTGGGA+TGG - Chr1:90412758-90412777 MsG0180005330.01.T01:CDS 35.0%
AACCAATCTCATGATGTGAT+AGG - Chr1:90415114-90415133 MsG0180005330.01.T01:CDS 35.0%
AACTAAGAGCAATTCCAATG+TGG - Chr1:90416518-90416537 MsG0180005330.01.T01:CDS 35.0%
AAGAAGAGTAGATCAAATGG+AGG + Chr1:90414192-90414211 None:intergenic 35.0%
AAGAGATGGACAGATAGTAT+TGG + Chr1:90414865-90414884 None:intergenic 35.0%
AAGCTCACTAGATTGAATGA+CGG - Chr1:90416976-90416995 MsG0180005330.01.T01:CDS 35.0%
AATAACTGAGAAACACCAGA+TGG + Chr1:90416820-90416839 None:intergenic 35.0%
AATAATCTTGGGACTAACTG+TGG + Chr1:90414532-90414551 None:intergenic 35.0%
ACAGCTTAAGGAAATTTGTC+GGG - Chr1:90411855-90411874 MsG0180005330.01.T01:intron 35.0%
ACTAAGAGCAATTCCAATGT+GGG - Chr1:90416519-90416538 MsG0180005330.01.T01:CDS 35.0%
AGAATATCCAACATGCACTT+AGG + Chr1:90414742-90414761 None:intergenic 35.0%
AGAATGAAGGAATATAGCCA+AGG + Chr1:90413931-90413950 None:intergenic 35.0%
AGAGACTTGTAGTAGGTTAT+GGG - Chr1:90414951-90414970 MsG0180005330.01.T01:CDS 35.0%
AGAGATGGACAGATAGTATT+GGG + Chr1:90414864-90414883 None:intergenic 35.0%
AGAGTAGAATGAAGAGAGAT+CGG + Chr1:90416703-90416722 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG + Chr1:90414108-90414127 None:intergenic 35.0%
AGCACCTATAGTAGAAAAGT+TGG + Chr1:90414273-90414292 None:intergenic 35.0%
AGTCAAGTTAAAAGAGGTAG+AGG + Chr1:90414167-90414186 None:intergenic 35.0%
ATACTAATTCCAACTCTCCA+TGG - Chr1:90414827-90414846 MsG0180005330.01.T01:intron 35.0%
ATCCCAAATTATGAGCCATT+TGG + Chr1:90412759-90412778 None:intergenic 35.0%
ATTTCGCGGAGAATGATAAA+GGG - Chr1:90412184-90412203 MsG0180005330.01.T01:intron 35.0%
CAGGTATATTGTTGGAACTT+CGG - Chr1:90412225-90412244 MsG0180005330.01.T01:intron 35.0%
CAGTTAAAAGCTTCGGAAAT+TGG + Chr1:90415626-90415645 None:intergenic 35.0%
CATGCACAAAGGAATTGAAA+TGG + Chr1:90413756-90413775 None:intergenic 35.0%
CCATGTTCAGTTAAAAGCTT+CGG + Chr1:90415633-90415652 None:intergenic 35.0%
CTAATGATGTCAGACAGATA+GGG - Chr1:90414308-90414327 MsG0180005330.01.T01:intron 35.0%
CTATACGAGCATGGAAAAAT+GGG + Chr1:90413073-90413092 None:intergenic 35.0%
CTTTGAACACACAATTGTTC+TGG - Chr1:90415137-90415156 MsG0180005330.01.T01:CDS 35.0%
GAAAATAGGCTTAGATGGTT+TGG + Chr1:90414248-90414267 None:intergenic 35.0%
GAGTTGCAGCAATTATATTC+AGG + Chr1:90414798-90414817 None:intergenic 35.0%
GCCAAAGTGACTTATCATTT+GGG + Chr1:90412598-90412617 None:intergenic 35.0%
GCTCAAGGAAGTCAATTAAA+TGG + Chr1:90415206-90415225 None:intergenic 35.0%
GCTCAAGGAAGTCAATTATA+TGG + Chr1:90415047-90415066 None:intergenic 35.0%
GCTTAATTTCAGTTCCATCA+TGG - Chr1:90413112-90413131 MsG0180005330.01.T01:intron 35.0%
GGTAAGAAGAGTAGATCAAA+TGG + Chr1:90414195-90414214 None:intergenic 35.0%
GTAGTAAAGAGGAAGAAGAT+TGG - Chr1:90411627-90411646 MsG0180005330.01.T01:CDS 35.0%
GTGTGTATCAATCACATGTT+TGG + Chr1:90416495-90416514 None:intergenic 35.0%
GTTGAATTTGCCTGTTGAAA+TGG + Chr1:90416146-90416165 None:intergenic 35.0%
TAACCTACTACAAGTCTCTA+AGG + Chr1:90414950-90414969 None:intergenic 35.0%
TAGAGACTTGTAGTAGGTTA+TGG - Chr1:90414950-90414969 MsG0180005330.01.T01:CDS 35.0%
TATAGATAGATGGATGCTCA+AGG + Chr1:90415062-90415081 None:intergenic 35.0%
TATGTATGGTTCACAGCAAT+TGG - Chr1:90415164-90415183 MsG0180005330.01.T01:CDS 35.0%
TCAATTGACTAGGAACTGAA+GGG + Chr1:90415977-90415996 None:intergenic 35.0%
TCCCAAATGGCTCATAATTT+GGG - Chr1:90412754-90412773 MsG0180005330.01.T01:CDS 35.0%
TCCCAAATTATGAGCCATTT+GGG + Chr1:90412758-90412777 None:intergenic 35.0%
TCGCAGTCTTTAATGAATGA+AGG - Chr1:90415822-90415841 MsG0180005330.01.T01:intron 35.0%
TCTAATGATGTCAGACAGAT+AGG - Chr1:90414307-90414326 MsG0180005330.01.T01:intron 35.0%
TCTCAGTTATTTAGCAAGGA+AGG - Chr1:90416829-90416848 MsG0180005330.01.T01:intron 35.0%
TCTCTCTTATACTATGCTAC+AGG + Chr1:90416463-90416482 None:intergenic 35.0%
TGAGATAATCTCAGAGCTTA+AGG - Chr1:90413551-90413570 MsG0180005330.01.T01:intron 35.0%
TGCCAAAGTGACTTATCATT+TGG + Chr1:90412599-90412618 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG + Chr1:90414253-90414272 None:intergenic 35.0%
TTACGGATTCTGTGAGTATA+CGG - Chr1:90412089-90412108 MsG0180005330.01.T01:intron 35.0%
TTCATTCATTAAAGACTGCG+AGG + Chr1:90415823-90415842 None:intergenic 35.0%
TTGATCAATGTGAGACCAAA+AGG - Chr1:90412819-90412838 MsG0180005330.01.T01:CDS 35.0%
TTGATCTACTCTTCTTACCA+CGG - Chr1:90414196-90414215 MsG0180005330.01.T01:intron 35.0%
TTTGTTTACCTATACGAGCA+TGG + Chr1:90413082-90413101 None:intergenic 35.0%
! AAAGAAAAGGGAAGGGTTTT+TGG - Chr1:90412316-90412335 MsG0180005330.01.T01:intron 35.0%
! AAGAAAAGGGAAGGGTTTTT+GGG - Chr1:90412317-90412336 MsG0180005330.01.T01:intron 35.0%
! ACTTGGCCTTCTTGAATATA+AGG + Chr1:90415936-90415955 None:intergenic 35.0%
! ATATAGGGAGAGAGTTTTTC+TGG - Chr1:90414556-90414575 MsG0180005330.01.T01:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG + Chr1:90414096-90414115 None:intergenic 35.0%
! GTTCCTTTTTCTTTTACTGC+AGG - Chr1:90413143-90413162 MsG0180005330.01.T01:CDS 35.0%
! TCATCTACTGCACTTCTTTT+AGG + Chr1:90412469-90412488 None:intergenic 35.0%
! TCTGAAACTTGTCTAAGGTT+TGG + Chr1:90415795-90415814 None:intergenic 35.0%
! TGATCCTTTAACTTTGCATC+TGG - Chr1:90413503-90413522 MsG0180005330.01.T01:intron 35.0%
! TTCAATCTAGTGAGCTTTGA+TGG + Chr1:90416973-90416992 None:intergenic 35.0%
! TTGATCTTGTCAGACTTGTT+AGG + Chr1:90414495-90414514 None:intergenic 35.0%
! TTGTTGTTGTTATGATGGCA+GGG - Chr1:90413631-90413650 MsG0180005330.01.T01:intron 35.0%
!! AGACAACTTTTTCTCCCAAA+TGG - Chr1:90412741-90412760 MsG0180005330.01.T01:CDS 35.0%
!! ATTGTTCTGGGATCTATGTA+TGG - Chr1:90415150-90415169 MsG0180005330.01.T01:CDS 35.0%
!! CTTTTAGGAGGGAAGAAAAA+TGG + Chr1:90412454-90412473 None:intergenic 35.0%
!! GAGATTGGTTTATATGCACA+AGG + Chr1:90415104-90415123 None:intergenic 35.0%
!! GTTGTTCTAGGATCTATGTA+TGG - Chr1:90414989-90415008 MsG0180005330.01.T01:intron 35.0%
!! TCAATTACGTGTTGATTTCG+CGG - Chr1:90412170-90412189 MsG0180005330.01.T01:intron 35.0%
!! TTTGTTGTTGTTATGATGGC+AGG - Chr1:90413630-90413649 MsG0180005330.01.T01:intron 35.0%
!!! GCAAACCATTTTGATTTGAC+GGG + Chr1:90413461-90413480 None:intergenic 35.0%
!!! TCTTTTGGAGTAGAGAATAC+AGG - Chr1:90416913-90416932 MsG0180005330.01.T01:intron 35.0%
AACATTTGGAGATGAGCACA+TGG + Chr1:90414893-90414912 None:intergenic 40.0%
AATGCACAAAGCAAGACTGA+TGG + Chr1:90416398-90416417 None:intergenic 40.0%
ACATCATTAGAGAGAGAGTG+GGG + Chr1:90414298-90414317 None:intergenic 40.0%
ACCCATAATGCATGACTTTC+AGG + Chr1:90412538-90412557 None:intergenic 40.0%
ACCCTGAAAGTCATGCATTA+TGG - Chr1:90412533-90412552 MsG0180005330.01.T01:CDS 40.0%
AGAATGAAGGGATATAGCCA+AGG + Chr1:90413847-90413866 None:intergenic 40.0%
AGAGAAACTGGGAAACCTAA+GGG - Chr1:90412066-90412085 MsG0180005330.01.T01:intron 40.0%
AGCCTATCACATCATGAGAT+TGG + Chr1:90415119-90415138 None:intergenic 40.0%
AGGATTTCTATGTTACGCCT+TGG - Chr1:90414924-90414943 MsG0180005330.01.T01:intron 40.0%
ATCTTCGACGAAGAAGAGAA+GGG + Chr1:90411570-90411589 None:intergenic 40.0%
ATGTATGGTTCGCAGCAATT+AGG - Chr1:90415004-90415023 MsG0180005330.01.T01:intron 40.0%
ATGTCTAACTGCATGATGAG+GGG - Chr1:90413964-90413983 MsG0180005330.01.T01:intron 40.0%
ATTCCTTCTCCATACAAACG+CGG + Chr1:90416436-90416455 None:intergenic 40.0%
CAATTCCAATGTGGGTTCTT+AGG - Chr1:90416527-90416546 MsG0180005330.01.T01:CDS 40.0%
CAGAGCTTAAGGTAAGTACT+GGG - Chr1:90413562-90413581 MsG0180005330.01.T01:intron 40.0%
CCCATAATGCATGACTTTCA+GGG + Chr1:90412537-90412556 None:intergenic 40.0%
CCCTGAAAGTCATGCATTAT+GGG - Chr1:90412534-90412553 MsG0180005330.01.T01:CDS 40.0%
CCTATACGAGCATGGAAAAA+TGG + Chr1:90413074-90413093 None:intergenic 40.0%
CTCCCAAATGGCTCATAATT+TGG - Chr1:90412753-90412772 MsG0180005330.01.T01:CDS 40.0%
CTCTACTCCAAAAGATACGT+TGG + Chr1:90416908-90416927 None:intergenic 40.0%
CTCTGATCAACAATCTTCAC+AGG - Chr1:90417110-90417129 MsG0180005330.01.T01:five_prime_UTR 40.0%
CTTCATTCTACTCTTCTGCT+TGG - Chr1:90416709-90416728 MsG0180005330.01.T01:intron 40.0%
GAATTTGCCTGTTGAAATGG+AGG + Chr1:90416143-90416162 None:intergenic 40.0%
GACATCATTAGAGAGAGAGT+GGG + Chr1:90414299-90414318 None:intergenic 40.0%
GACCCTGCAGTAAAAGAAAA+AGG + Chr1:90413149-90413168 None:intergenic 40.0%
GAGGAGAGTCAAGTTAAAAG+AGG + Chr1:90414173-90414192 None:intergenic 40.0%
GATGTCTAACTGCATGATGA+GGG - Chr1:90413963-90413982 MsG0180005330.01.T01:intron 40.0%
GATTTCGCGGAGAATGATAA+AGG - Chr1:90412183-90412202 MsG0180005330.01.T01:intron 40.0%
GCCCAAATGATAAGTCACTT+TGG - Chr1:90412594-90412613 MsG0180005330.01.T01:CDS 40.0%
GGATTTACGGTCAATTGACT+AGG + Chr1:90415987-90416006 None:intergenic 40.0%
GGTTCTTAGGAGTTCTTAGA+CGG - Chr1:90416540-90416559 MsG0180005330.01.T01:CDS 40.0%
GTAAAGAGGAAGAAGATTGG+AGG - Chr1:90411630-90411649 MsG0180005330.01.T01:CDS 40.0%
GTCAATTGACTAGGAACTGA+AGG + Chr1:90415978-90415997 None:intergenic 40.0%
TAATTCCAACTCTCCATGGA+AGG - Chr1:90414831-90414850 MsG0180005330.01.T01:intron 40.0%
TAGAGAAACTGGGAAACCTA+AGG - Chr1:90412065-90412084 MsG0180005330.01.T01:intron 40.0%
TAGGAACTGAAGGGTTATGA+GGG + Chr1:90415968-90415987 None:intergenic 40.0%
TAGTTCCTAAAGCAGATGTG+CGG - Chr1:90417085-90417104 MsG0180005330.01.T01:five_prime_UTR 40.0%
TATACCTGAAAAAGGGCCTT+GGG + Chr1:90413715-90413734 None:intergenic 40.0%
TCAGAGCTTAAGGTAAGTAC+TGG - Chr1:90413561-90413580 MsG0180005330.01.T01:intron 40.0%
TCCAACATGCACTTAGGAAT+CGG + Chr1:90414736-90414755 None:intergenic 40.0%
TGACATCATTAGAGAGAGAG+TGG + Chr1:90414300-90414319 None:intergenic 40.0%
TGACTTATCATTTGGGCCAT+GGG + Chr1:90412591-90412610 None:intergenic 40.0%
TGATCACACACAGTTGTTCT+AGG - Chr1:90414977-90414996 MsG0180005330.01.T01:CDS 40.0%
TGATGTCTAACTGCATGATG+AGG - Chr1:90413962-90413981 MsG0180005330.01.T01:intron 40.0%
TGTATGGTTCGCAGCAATTA+GGG - Chr1:90415005-90415024 MsG0180005330.01.T01:intron 40.0%
TGTGCTTGTGTCAGAATGAA+GGG + Chr1:90413859-90413878 None:intergenic 40.0%
TGTTCCTCTGTAGCATCATA+CGG + Chr1:90411838-90411857 None:intergenic 40.0%
TTAATGAATGAAGGCCACCT+TGG - Chr1:90415831-90415850 MsG0180005330.01.T01:intron 40.0%
TTATACCTGAAAAAGGGCCT+TGG + Chr1:90413716-90413735 None:intergenic 40.0%
TTCAACATCCAGCAAACTCA+CGG + Chr1:90414457-90414476 None:intergenic 40.0%
TTCTCTTCTTCGTCGAAGAT+CGG - Chr1:90411570-90411589 MsG0180005330.01.T01:CDS 40.0%
TTGGCCAGATGCAAAGTTAA+AGG + Chr1:90413510-90413529 None:intergenic 40.0%
TTGTGCTTGTGTCAGAATGA+AGG + Chr1:90413860-90413879 None:intergenic 40.0%
TTGTTAGGACTGGATGTTGA+GGG - Chr1:90412289-90412308 MsG0180005330.01.T01:intron 40.0%
TTTGTTAGGACTGGATGTTG+AGG - Chr1:90412288-90412307 MsG0180005330.01.T01:intron 40.0%
! ACTAGATTGAATGACGGAAG+GGG - Chr1:90416982-90417001 MsG0180005330.01.T01:CDS 40.0%
! AGAAAAGGGAAGGGTTTTTG+GGG - Chr1:90412318-90412337 MsG0180005330.01.T01:intron 40.0%
! CACTAGATTGAATGACGGAA+GGG - Chr1:90416981-90417000 MsG0180005330.01.T01:CDS 40.0%
! TACTGGTTGTTGTAGAAACG+AGG + Chr1:90416192-90416211 None:intergenic 40.0%
! TCACTAGATTGAATGACGGA+AGG - Chr1:90416980-90416999 MsG0180005330.01.T01:CDS 40.0%
! TCTACTGCACTTCTTTTAGG+AGG + Chr1:90412466-90412485 None:intergenic 40.0%
!! ACATCTGCTTTAGGAACTAC+AGG + Chr1:90417084-90417103 None:intergenic 40.0%
!! CCATTTTTCCATGCTCGTAT+AGG - Chr1:90413071-90413090 MsG0180005330.01.T01:intron 40.0%
!! CCGAAGCTTTTAACTGAACA+TGG - Chr1:90415630-90415649 MsG0180005330.01.T01:intron 40.0%
!! CTACTGCACTTCTTTTAGGA+GGG + Chr1:90412465-90412484 None:intergenic 40.0%
!! GGTTGCTTTGATGATGTTGA+GGG + Chr1:90416037-90416056 None:intergenic 40.0%
!! GTTGCTTTGATGATGTTGAG+GGG + Chr1:90416036-90416055 None:intergenic 40.0%
!! TCAGACTTGTTAGGCCTTTA+AGG + Chr1:90414486-90414505 None:intergenic 40.0%
!! TGGTTGCTTTGATGATGTTG+AGG + Chr1:90416038-90416057 None:intergenic 40.0%
!! TTGCTTTGATGATGTTGAGG+GGG + Chr1:90416035-90416054 None:intergenic 40.0%
!!! CTTTTGGGTTTTGTTAGGAC+TGG - Chr1:90412279-90412298 MsG0180005330.01.T01:intron 40.0%
AAACAGCGTTAAGTGCTCGT+AGG - Chr1:90412118-90412137 MsG0180005330.01.T01:intron 45.0%
AACGGATCATCCCTTGTTCT+CGG - Chr1:90417039-90417058 MsG0180005330.01.T01:five_prime_UTR 45.0%
AAGGAAATTTGTCGGGAGGT+TGG - Chr1:90411862-90411881 MsG0180005330.01.T01:intron 45.0%
AAGTCCCCTTCACTCAAACA+AGG + Chr1:90412386-90412405 None:intergenic 45.0%
AAGTGCTCGTAGGAATCTTC+AGG - Chr1:90412128-90412147 MsG0180005330.01.T01:intron 45.0%
ACAGAAAAACTGCCCGTAGT+TGG + Chr1:90416116-90416135 None:intergenic 45.0%
ACCAAAGACAGTGCGATGTT+GGG + Chr1:90411703-90411722 None:intergenic 45.0%
ACGAGCATGGAAAAATGGGT+TGG + Chr1:90413069-90413088 None:intergenic 45.0%
ACGGCAATATGAAGACCCAT+AGG + Chr1:90413387-90413406 None:intergenic 45.0%
ACTGGGAAACCTAAGGGTTA+CGG - Chr1:90412072-90412091 MsG0180005330.01.T01:intron 45.0%
AGAAAAACTGCCCGTAGTTG+GGG + Chr1:90416114-90416133 None:intergenic 45.0%
AGCAGCTCAACATCAACCTA+TGG - Chr1:90413368-90413387 MsG0180005330.01.T01:intron 45.0%
AGTACTCTGCATGGCATTCA+GGG - Chr1:90416574-90416593 MsG0180005330.01.T01:CDS 45.0%
AGTGCTCGTAGGAATCTTCA+GGG - Chr1:90412129-90412148 MsG0180005330.01.T01:intron 45.0%
ATGAGCTACTTCCGAGAACA+AGG + Chr1:90417053-90417072 None:intergenic 45.0%
ATGATGTTGAGGGGGAATTC+TGG + Chr1:90416027-90416046 None:intergenic 45.0%
ATTCTACTCTTCTGCTTGGC+TGG - Chr1:90416713-90416732 MsG0180005330.01.T01:intron 45.0%
CAGAAAAACTGCCCGTAGTT+GGG + Chr1:90416115-90416134 None:intergenic 45.0%
CATACCGTATGATGCTACAG+AGG - Chr1:90411831-90411850 MsG0180005330.01.T01:CDS 45.0%
CATCATTAGAGAGAGAGTGG+GGG + Chr1:90414297-90414316 None:intergenic 45.0%
CATGACAGTTGCAGCTGTTA+CGG + Chr1:90413406-90413425 None:intergenic 45.0%
CCAGGAATGACAACAAATGC+AGG - Chr1:90413177-90413196 MsG0180005330.01.T01:intron 45.0%
CCATGAAATCGAGAGGAAGA+AGG + Chr1:90411668-90411687 None:intergenic 45.0%
CCTTCTTCCTCTCGATTTCA+TGG - Chr1:90411665-90411684 MsG0180005330.01.T01:CDS 45.0%
CTACAACAACCAGTACGTGT+TGG - Chr1:90416197-90416216 MsG0180005330.01.T01:intron 45.0%
CTAGGAACTGAAGGGTTATG+AGG + Chr1:90415969-90415988 None:intergenic 45.0%
GAACTCCTAAGAACCCACAT+TGG + Chr1:90416535-90416554 None:intergenic 45.0%
GACTTATCATTTGGGCCATG+GGG + Chr1:90412590-90412609 None:intergenic 45.0%
GATCTTCGACGAAGAAGAGA+AGG + Chr1:90411571-90411590 None:intergenic 45.0%
GATGGTCGTGTAAAGGATTC+TGG + Chr1:90416955-90416974 None:intergenic 45.0%
GCAGCTCAACATCAACCTAT+GGG - Chr1:90413369-90413388 MsG0180005330.01.T01:intron 45.0%
GCTTAAGGAAATTTGTCGGG+AGG - Chr1:90411858-90411877 MsG0180005330.01.T01:intron 45.0%
GGCATCCCGTCAAATCAAAA+TGG - Chr1:90413453-90413472 MsG0180005330.01.T01:intron 45.0%
GTGACTTATCATTTGGGCCA+TGG + Chr1:90412592-90412611 None:intergenic 45.0%
GTGCTTGCATACATGCACAA+AGG + Chr1:90413767-90413786 None:intergenic 45.0%
GTTGAGGGAGGGAAAGAAAA+GGG - Chr1:90412304-90412323 MsG0180005330.01.T01:intron 45.0%
GTTGTTATGATGGCAGGGAA+TGG - Chr1:90413636-90413655 MsG0180005330.01.T01:intron 45.0%
TAAAGGGAGGGAAAGGAGAA+TGG - Chr1:90412341-90412360 MsG0180005330.01.T01:intron 45.0%
TAACCGCGTTTGTATGGAGA+AGG - Chr1:90416430-90416449 MsG0180005330.01.T01:CDS 45.0%
TACCAAAGACAGTGCGATGT+TGG + Chr1:90411704-90411723 None:intergenic 45.0%
TCACAGAATCCGTAACCCTT+AGG + Chr1:90412084-90412103 None:intergenic 45.0%
TCAGACGTACCTGTTTCCAA+CGG - Chr1:90417021-90417040 MsG0180005330.01.T01:exon 45.0%
TGAGCTACTTCCGAGAACAA+GGG + Chr1:90417052-90417071 None:intergenic 45.0%
TGATGTTGAGGGGGAATTCT+GGG + Chr1:90416026-90416045 None:intergenic 45.0%
TGCTACAGAGGAACAGCTTA+AGG - Chr1:90411843-90411862 MsG0180005330.01.T01:intron 45.0%
TGGAGTAGAGAATACAGGCA+TGG - Chr1:90416918-90416937 MsG0180005330.01.T01:intron 45.0%
TGGCATTCAGGGTGGAAAAT+AGG - Chr1:90416585-90416604 MsG0180005330.01.T01:intron 45.0%
TGGTCAGACTCAGCAAACAT+TGG - Chr1:90415851-90415870 MsG0180005330.01.T01:intron 45.0%
TGTCTAACTGCATGATGAGG+GGG - Chr1:90413965-90413984 MsG0180005330.01.T01:intron 45.0%
TGTTAGGCCTCCATTTCAAC+AGG - Chr1:90416133-90416152 MsG0180005330.01.T01:intron 45.0%
TGTTGAGGGAGGGAAAGAAA+AGG - Chr1:90412303-90412322 MsG0180005330.01.T01:intron 45.0%
TGTTGTAGAAACGAGGCATG+CGG + Chr1:90416185-90416204 None:intergenic 45.0%
TTCCAACGCTCTTGAGGATT+GGG - Chr1:90416861-90416880 MsG0180005330.01.T01:intron 45.0%
TTCTTCGTCGAAGATCGGAA+CGG - Chr1:90411575-90411594 MsG0180005330.01.T01:CDS 45.0%
TTGATGTTGAGCTGCTTGAG+CGG + Chr1:90413364-90413383 None:intergenic 45.0%
! AACTTGCTCTGTCCATAAGG+AGG + Chr1:90415897-90415916 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - Chr1:90414027-90414046 MsG0180005330.01.T01:intron 45.0%
! AGCAACCATTTTGTACAGCC+TGG - Chr1:90416050-90416069 MsG0180005330.01.T01:intron 45.0%
! ATGTTTGCTGAGTCTGACCA+AGG + Chr1:90415851-90415870 None:intergenic 45.0%
! ATTTTGTACAGCCTGGAGCA+GGG - Chr1:90416057-90416076 MsG0180005330.01.T01:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - Chr1:90414026-90414045 MsG0180005330.01.T01:intron 45.0%
! CACCATTAGAGTACTCTGCA+TGG - Chr1:90416565-90416584 MsG0180005330.01.T01:CDS 45.0%
! CTACGGGCAGTTTTTCTGTT+AGG - Chr1:90416117-90416136 MsG0180005330.01.T01:intron 45.0%
! GAGCTTTGATGGTCGTGTAA+AGG + Chr1:90416962-90416981 None:intergenic 45.0%
! TATCTCAGATAGCTGACTCC+TGG + Chr1:90413538-90413557 None:intergenic 45.0%
! TCCCTCCTTGTTTGAGTGAA+GGG - Chr1:90412378-90412397 MsG0180005330.01.T01:intron 45.0%
! TGCAACTTGCTCTGTCCATA+AGG + Chr1:90415900-90415919 None:intergenic 45.0%
! TGCCATGCAGAGTACTCTAA+TGG + Chr1:90416570-90416589 None:intergenic 45.0%
! TGGCCTTAGAGACTTGTAGT+AGG - Chr1:90414944-90414963 MsG0180005330.01.T01:CDS 45.0%
! TGGCTCATAATTTGGGATGG+AGG - Chr1:90412761-90412780 MsG0180005330.01.T01:CDS 45.0%
! TTTCTTTTACTGCAGGGTCG+CGG - Chr1:90413150-90413169 MsG0180005330.01.T01:intron 45.0%
!! AAAAATGGGTTGGAAGGAGG+TGG + Chr1:90413059-90413078 None:intergenic 45.0%
!! ACTACAAGTCTCTAAGGCCA+AGG + Chr1:90414944-90414963 None:intergenic 45.0%
!! CCTGCATTTGTTGTCATTCC+TGG + Chr1:90413180-90413199 None:intergenic 45.0%
!! GCATGGAAAAATGGGTTGGA+AGG + Chr1:90413065-90413084 None:intergenic 45.0%
!! GCTTTAGGAACTACAGGTAC+AGG + Chr1:90417078-90417097 None:intergenic 45.0%
!! GGGATGCCTAATTGTTTCTG+AGG + Chr1:90413324-90413343 None:intergenic 45.0%
!! TAGCTGACTCCTGGACATTT+TGG + Chr1:90413529-90413548 None:intergenic 45.0%
!! TGGAAAAATGGGTTGGAAGG+AGG + Chr1:90413062-90413081 None:intergenic 45.0%
!!! GGAAGGGTTTTTGGGGTAAA+GGG - Chr1:90412325-90412344 MsG0180005330.01.T01:intron 45.0%
!! AAATGTAAATATTTATTTAA+AGG + Chr1:90415459-90415478 None:intergenic 5.0%
!!! AAAAAAAAATTCTTAAATTT+TGG + Chr1:90416635-90416654 None:intergenic 5.0%
AAACACCAGATGGCATGGAG+GGG + Chr1:90416810-90416829 None:intergenic 50.0%
AAATTACTCTGCCCTGCTCC+AGG + Chr1:90416071-90416090 None:intergenic 50.0%
AAGCCCTATCCCTCTAAGTG+GGG - Chr1:90414654-90414673 MsG0180005330.01.T01:intron 50.0%
ACTGTCATGACTGCAGCTCT+AGG - Chr1:90413417-90413436 MsG0180005330.01.T01:intron 50.0%
AGAAACACCAGATGGCATGG+AGG + Chr1:90416812-90416831 None:intergenic 50.0%
AGCACATGGCTGTCAAGAGA+TGG + Chr1:90414879-90414898 None:intergenic 50.0%
AGGGAGGGAAAGAAAAGGGA+AGG - Chr1:90412308-90412327 MsG0180005330.01.T01:intron 50.0%
AGGGATGATCCGTTGGAAAC+AGG + Chr1:90417033-90417052 None:intergenic 50.0%
AGGGATGGTCAACCCTCAAA+TGG - Chr1:90415507-90415526 MsG0180005330.01.T01:intron 50.0%
AGGTATGTCGTGCAACCTGA+AGG - Chr1:90417130-90417149 MsG0180005330.01.T01:five_prime_UTR 50.0%
ATTGGGAGTTCCACCTTCCA+TGG + Chr1:90414847-90414866 None:intergenic 50.0%
CAAGCCCTATCCCTCTAAGT+GGG - Chr1:90414653-90414672 MsG0180005330.01.T01:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG + Chr1:90414028-90414047 None:intergenic 50.0%
CCCCTTCACTCAAACAAGGA+GGG + Chr1:90412382-90412401 None:intergenic 50.0%
CTGAGAAACACCAGATGGCA+TGG + Chr1:90416815-90416834 None:intergenic 50.0%
CTGCTCCAGGCTGTACAAAA+TGG + Chr1:90416058-90416077 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - Chr1:90414031-90414050 MsG0180005330.01.T01:intron 50.0%
CTTCCAACGCTCTTGAGGAT+TGG - Chr1:90416860-90416879 MsG0180005330.01.T01:intron 50.0%
GAAAAACTGCCCGTAGTTGG+GGG + Chr1:90416113-90416132 None:intergenic 50.0%
GAAACACCAGATGGCATGGA+GGG + Chr1:90416811-90416830 None:intergenic 50.0%
GAGAACAAGGGATGATCCGT+TGG + Chr1:90417040-90417059 None:intergenic 50.0%
GAGTACTCTGCATGGCATTC+AGG - Chr1:90416573-90416592 MsG0180005330.01.T01:CDS 50.0%
GGACAGAGCAAGTTGCAGTT+TGG - Chr1:90415903-90415922 MsG0180005330.01.T01:intron 50.0%
GGGAATGGCTACACACAACA+AGG - Chr1:90413651-90413670 MsG0180005330.01.T01:intron 50.0%
GGGAGGGAAAGAAAAGGGAA+GGG - Chr1:90412309-90412328 MsG0180005330.01.T01:intron 50.0%
GTTGAGCTTCCAACACGTAC+TGG + Chr1:90416209-90416228 None:intergenic 50.0%
TAGACCTTCCAACGCTCTTG+AGG - Chr1:90416855-90416874 MsG0180005330.01.T01:intron 50.0%
TAGGACTGGATGTTGAGGGA+GGG - Chr1:90412293-90412312 MsG0180005330.01.T01:intron 50.0%
TAGGCATCCCAGCTGTTCAA+GGG - Chr1:90413334-90413353 MsG0180005330.01.T01:intron 50.0%
TCCCAACATCGCACTGTCTT+TGG - Chr1:90411699-90411718 MsG0180005330.01.T01:CDS 50.0%
TCCCCTTCACTCAAACAAGG+AGG + Chr1:90412383-90412402 None:intergenic 50.0%
TCGTCCAGATGCAAGCTTTC+AGG - Chr1:90416253-90416272 MsG0180005330.01.T01:intron 50.0%
TCTTCTTACCACGGCGTCTA+CGG - Chr1:90414205-90414224 MsG0180005330.01.T01:intron 50.0%
TGCATCTGGCCAAAATGTCC+AGG - Chr1:90413517-90413536 MsG0180005330.01.T01:intron 50.0%
TTAGGACTGGATGTTGAGGG+AGG - Chr1:90412292-90412311 MsG0180005330.01.T01:intron 50.0%
TTAGGCATCCCAGCTGTTCA+AGG - Chr1:90413333-90413352 MsG0180005330.01.T01:intron 50.0%
TTCCAACTCTCCATGGAAGG+TGG - Chr1:90414834-90414853 MsG0180005330.01.T01:intron 50.0%
TTCCACCTTCCATGGAGAGT+TGG + Chr1:90414839-90414858 None:intergenic 50.0%
TTCCATACGTCCCCCAACTA+CGG - Chr1:90416100-90416119 MsG0180005330.01.T01:intron 50.0%
TTTGCTGAGTCTGACCAAGG+TGG + Chr1:90415848-90415867 None:intergenic 50.0%
! CATTTTGTACAGCCTGGAGC+AGG - Chr1:90416056-90416075 MsG0180005330.01.T01:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - Chr1:90414025-90414044 MsG0180005330.01.T01:intron 50.0%
! CCCTCCTTGTTTGAGTGAAG+GGG - Chr1:90412379-90412398 MsG0180005330.01.T01:intron 50.0%
! CTCCCTCCTTGTTTGAGTGA+AGG - Chr1:90412377-90412396 MsG0180005330.01.T01:intron 50.0%
! GCCGATTCCTAAGTGCATGT+TGG - Chr1:90414732-90414751 MsG0180005330.01.T01:intron 50.0%
! TTCTTTTACTGCAGGGTCGC+GGG - Chr1:90413151-90413170 MsG0180005330.01.T01:intron 50.0%
! TTTGGGGTAAAGGGAGGGAA+AGG - Chr1:90412334-90412353 MsG0180005330.01.T01:intron 50.0%
!! CAATCCTCAAGAGCGTTGGA+AGG + Chr1:90416862-90416881 None:intergenic 50.0%
!! CAGAGGAGGCTCTGGATTTA+CGG + Chr1:90416000-90416019 None:intergenic 50.0%
!! GCAAACATTGGTTCCGACTG+TGG - Chr1:90415863-90415882 MsG0180005330.01.T01:intron 50.0%
!! GGTGGTGGAACAAACGCTTA+TGG - Chr1:90411605-90411624 MsG0180005330.01.T01:CDS 50.0%
!! TATGAGGGAGAGTGCTGACT+TGG + Chr1:90415953-90415972 None:intergenic 50.0%
!!! AGGGTTTTTGGGGTAAAGGG+AGG - Chr1:90412328-90412347 MsG0180005330.01.T01:intron 50.0%
!!! GGGAAGGGTTTTTGGGGTAA+AGG - Chr1:90412324-90412343 MsG0180005330.01.T01:intron 50.0%
!!! GGGTTTTTGGGGTAAAGGGA+GGG - Chr1:90412329-90412348 MsG0180005330.01.T01:intron 50.0%
AAAAGGGCCTTGGGCAACTG+TGG + Chr1:90413706-90413725 None:intergenic 55.0%
ACAGTGCGATGTTGGGACTG+AGG + Chr1:90411696-90411715 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - Chr1:90414039-90414058 MsG0180005330.01.T01:intron 55.0%
ACTCTGCATGGCATTCAGGG+TGG - Chr1:90416577-90416596 MsG0180005330.01.T01:CDS 55.0%
AGAAGCCGACCCCACTTAGA+GGG + Chr1:90414666-90414685 None:intergenic 55.0%
AGGCATCCCAGCTGTTCAAG+GGG - Chr1:90413335-90413354 MsG0180005330.01.T01:intron 55.0%
ATGTAGCCGACCCCACTTAG+TGG + Chr1:90414040-90414059 None:intergenic 55.0%
CCAAGCCCTATCCCTCTAAG+TGG - Chr1:90414652-90414671 MsG0180005330.01.T01:intron 55.0%
CCACTTAGAGGGATAGGGCT+TGG + Chr1:90414655-90414674 None:intergenic 55.0%
CCTATCCCTCTAAGTGGGGT+CGG - Chr1:90414658-90414677 MsG0180005330.01.T01:intron 55.0%
CGACCCCACTTAGAGGGATA+GGG + Chr1:90414660-90414679 None:intergenic 55.0%
CGACCCCACTTAGTGGGATA+AGG + Chr1:90414033-90414052 None:intergenic 55.0%
CGGATTCCCCTTGAACAGCT+GGG + Chr1:90413344-90413363 None:intergenic 55.0%
CTTCTTACCACGGCGTCTAC+GGG - Chr1:90414206-90414225 MsG0180005330.01.T01:intron 55.0%
GAAGATCGGAACGGAGAGTG+TGG - Chr1:90411584-90411603 MsG0180005330.01.T01:CDS 55.0%
GCGATGATCCGTGAGTTTGC+TGG - Chr1:90414446-90414465 MsG0180005330.01.T01:intron 55.0%
GGAGCAGCCATGAAATCGAG+AGG + Chr1:90411675-90411694 None:intergenic 55.0%
GGAGGGAAAGGAGAATGGCA+GGG - Chr1:90412346-90412365 MsG0180005330.01.T01:intron 55.0%
GGCACCTGAAAGCTTGCATC+TGG + Chr1:90416260-90416279 None:intergenic 55.0%
GTAGTTGGGGGACGTATGGA+AGG + Chr1:90416101-90416120 None:intergenic 55.0%
TCCATACGTCCCCCAACTAC+GGG - Chr1:90416101-90416120 MsG0180005330.01.T01:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + Chr1:90414039-90414058 None:intergenic 55.0%
TTCAAGGCCACAGTTGCCCA+AGG - Chr1:90413696-90413715 MsG0180005330.01.T01:intron 55.0%
! GAGTGCCGCACATCTGCTTT+AGG + Chr1:90417093-90417112 None:intergenic 55.0%
! GTGGCCTTGAAAGCAACAGC+TGG + Chr1:90413687-90413706 None:intergenic 55.0%
! GTTGCCCAAGGCCCTTTTTC+AGG - Chr1:90413708-90413727 MsG0180005330.01.T01:intron 55.0%
! TCTTTTACTGCAGGGTCGCG+GGG - Chr1:90413152-90413171 MsG0180005330.01.T01:intron 55.0%
!! ACATTGGTTCCGACTGTGGC+TGG - Chr1:90415867-90415886 MsG0180005330.01.T01:intron 55.0%
!! CTCGCCAGCTGTTGCTTTCA+AGG - Chr1:90413680-90413699 MsG0180005330.01.T01:intron 55.0%
!! GTCATGACTGCAGCTCTAGG+TGG - Chr1:90413420-90413439 MsG0180005330.01.T01:intron 55.0%
!! GTGGCTGGTCTACCTCCTTA+TGG - Chr1:90415882-90415901 MsG0180005330.01.T01:intron 55.0%
ACGGAAGGGGTCTCTCTGCT+GGG - Chr1:90416995-90417014 MsG0180005330.01.T01:CDS 60.0%
CCGACCCCACTTAGAGGGAT+AGG + Chr1:90414661-90414680 None:intergenic 60.0%
GAAACGAGGCATGCGGTTGC+TGG + Chr1:90416178-90416197 None:intergenic 60.0%
GAGAAGCCGACCCCACTTAG+AGG + Chr1:90414667-90414686 None:intergenic 60.0%
GCGGATTCCCCTTGAACAGC+TGG + Chr1:90413345-90413364 None:intergenic 60.0%
GGAATTCTGGGCTGCAGAGG+AGG + Chr1:90416014-90416033 None:intergenic 60.0%
GGAGGTAGACCAGCCACAGT+CGG + Chr1:90415879-90415898 None:intergenic 60.0%
GGGAAAGGAGAATGGCAGGG+AGG - Chr1:90412349-90412368 MsG0180005330.01.T01:intron 60.0%
GGGAGGGAAAGGAGAATGGC+AGG - Chr1:90412345-90412364 MsG0180005330.01.T01:intron 60.0%
! CTTTTACTGCAGGGTCGCGG+GGG - Chr1:90413153-90413172 MsG0180005330.01.T01:intron 60.0%
! GATCGGAACGGAGAGTGTGG+TGG - Chr1:90411587-90411606 MsG0180005330.01.T01:CDS 60.0%
! GCTCTAGGTGGTGCTCAGAC+TGG - Chr1:90413432-90413451 MsG0180005330.01.T01:intron 60.0%
! GGCCCAATCCTCAAGAGCGT+TGG + Chr1:90416866-90416885 None:intergenic 60.0%
GACGGAAGGGGTCTCTCTGC+TGG - Chr1:90416994-90417013 MsG0180005330.01.T01:CDS 65.0%
GAGAAGACCCGTAGACGCCG+TGG + Chr1:90414216-90414235 None:intergenic 65.0%
GCCCGTAGTTGGGGGACGTA+TGG + Chr1:90416105-90416124 None:intergenic 65.0%
GGGGGAATTCTGGGCTGCAG+AGG + Chr1:90416017-90416036 None:intergenic 65.0%
! CGGAACGGAGAGTGTGGTGG+TGG - Chr1:90411590-90411609 MsG0180005330.01.T01:CDS 65.0%
CTGGGCTGCAGAGGAGGCTC+TGG + Chr1:90416008-90416027 None:intergenic 70.0%
GCTGGCCCCTCCATGCCATC+TGG - Chr1:90416802-90416821 MsG0180005330.01.T01:CDS 70.0%
! CTGCAGGGTCGCGGGGGACC+AGG - Chr1:90413159-90413178 MsG0180005330.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 90411507 90417149 90411507 ID=MsG0180005330.01;Name=MsG0180005330.01
Chr1 mRNA 90411507 90417149 90411507 ID=MsG0180005330.01.T01;Parent=MsG0180005330.01;Name=MsG0180005330.01.T01;_AED=0.41;_eAED=0.42;_QI=117|0.71|0.62|1|1|1|8|0|508
Chr1 exon 90411507 90411854 90411507 ID=MsG0180005330.01.T01:exon:47996;Parent=MsG0180005330.01.T01
Chr1 exon 90412406 90412873 90412406 ID=MsG0180005330.01.T01:exon:47995;Parent=MsG0180005330.01.T01
Chr1 exon 90413128 90413163 90413128 ID=MsG0180005330.01.T01:exon:47994;Parent=MsG0180005330.01.T01
Chr1 exon 90414927 90415004 90414927 ID=MsG0180005330.01.T01:exon:47993;Parent=MsG0180005330.01.T01
Chr1 exon 90415084 90415329 90415084 ID=MsG0180005330.01.T01:exon:47992;Parent=MsG0180005330.01.T01
Chr1 exon 90416429 90416603 90416429 ID=MsG0180005330.01.T01:exon:47991;Parent=MsG0180005330.01.T01
Chr1 exon 90416754 90416832 90416754 ID=MsG0180005330.01.T01:exon:47990;Parent=MsG0180005330.01.T01
Chr1 exon 90416936 90417149 90416936 ID=MsG0180005330.01.T01:exon:47989;Parent=MsG0180005330.01.T01
Chr1 five_prime_UTR 90417033 90417149 90417033 ID=MsG0180005330.01.T01:five_prime_utr;Parent=MsG0180005330.01.T01
Chr1 CDS 90416936 90417032 90416936 ID=MsG0180005330.01.T01:cds;Parent=MsG0180005330.01.T01
Chr1 CDS 90416754 90416832 90416754 ID=MsG0180005330.01.T01:cds;Parent=MsG0180005330.01.T01
Chr1 CDS 90416429 90416603 90416429 ID=MsG0180005330.01.T01:cds;Parent=MsG0180005330.01.T01
Chr1 CDS 90415084 90415329 90415084 ID=MsG0180005330.01.T01:cds;Parent=MsG0180005330.01.T01
Chr1 CDS 90414927 90415004 90414927 ID=MsG0180005330.01.T01:cds;Parent=MsG0180005330.01.T01
Chr1 CDS 90413128 90413163 90413128 ID=MsG0180005330.01.T01:cds;Parent=MsG0180005330.01.T01
Chr1 CDS 90412406 90412873 90412406 ID=MsG0180005330.01.T01:cds;Parent=MsG0180005330.01.T01
Chr1 CDS 90411507 90411854 90411507 ID=MsG0180005330.01.T01:cds;Parent=MsG0180005330.01.T01
Gene Sequence

>MsG0180005330.01.T01

ATGGTAGTAAAGAGGAAGAAGATTGGAGGAGCAACGCTTCACCTTCTTCCTCTCGATTTCATGGCTGCTCCTCAGTCCCAACATCGCACTGTCTTTGTTGGGAACATACCGTATGATGCTACAGAGGAACAGCTTAAGGAAATTTGTCGGGAGGTTGGTCCTGTTATAAGTTTTAGATTAGTTACTGATAGAGAAACTGGGAAACCTAAGGGTTACGGATTCTGTGAGTATACGGATGAAGAAACAGCGTTAAGTGCTCGTAGGAATCTTCAGGGTTATGAAATTAATGGACGTCAATTACGTGTTGATTTCGCGGAGAATGATAAAGGGAATGATAGAAATAAAGATCAGAAACAATTAGGCATCCCAGCTGTTCAAGGGGAATCCGCTCAAGCAGCTCAACATCAACCTATGGGTCTTCATATTGCCGTAACAGCTGCAACTGTCATGACTGCAGCTCTAGGTGGTGCTCAGACTGGCATCCCGTCAAATCAAAATGGTTTGCAGAGTCAGCAAGCATTAGCAAATGATCCTTTAACTTTGCATCTGGCCAAAATGTCCAGGAGTCAGCTATCTGAGATAATCTCAGAGCTTAAGGGAATGGCTACACACAACAAGGACTTGTCTCGCCAGCTGTTGCTTTCAAGGCCACAGTTGCCCAAGGCCCTTTTTCAGGCTCAGATAATGCTAGGGATGGTCAACCCTCAAATGTTACAAATGCCAAACCTTAGACAAGTTTCAGATCAAACCTCGCAGTCTTTAATGAATGAAGGCCACCTTGGTCAGACTCAGCAAACATTGGTTCCGACTGTGGCTGGTCTACCTCCTTATGGACAGAGCAAGTTGCAGTTTGGCTTGACACCTTATATTCAAGAAGGCCAAGTCAGCACTCTCCCTCATAACCCTTCAGTTCCTAGTCAATTGACCGTAAATCCAGAGCCTCCTCTGCAGCCCAGAATTCCCCCTCAACATCATCAAAGCAACCATTTTGTACAGCCTGGAGCAGGGCAGAGTAATTTAATACTTCCTTCCATACGTCCCCCAACTACGGGCAGTTTTTCTGTTAGGCCTCCATTTCAACAGGCAAATTCAACTGTAGTGAACCAGCAACCGCATGCCTCGTTTCTACAACAACCAGTACGTGTTGGAAGCTCAACTGTTTCACATAATATTCATATGGCTGGCCCCTCCATGCCATCTGGTGTTTCTCAGTTATTTAGCAAGGAAGGTGATAGACCTTCCAACGCTCTTGAGGATTGGGCCAAAAGTAGTAGTAAATATTCCAACGTATCTTTTGGAGTAGAGAATACAGGCATGGTTCATGATAATCCAGAATCCTTTACACGACCATCAAAGCTCACTAGATTGAATGACGGAAGGGGTCTCTCTGCTGGGACTTCAGACGTACCTGTTTCCAACGGATCATCCCTTGTTCTCGGAAGTAGCTCATTACCTGTACCTGTAGTTCCTAAAGCAGATGTGCGGCACTCTGATCAACAATCTTCACAGGTATGTCGTGCAACCTGA
Protein sequence

>MsG0180005330.01.T01

MVVKRKKIGGATLHLLPLDFMAAPQSQHRTVFVGNIPYDATEEQLKEICREVGPVISFRLVTDRETGKPKGYGFCEYTDEETALSARRNLQGYEINGRQLRVDFAENDKGNDRNKDQKQLGIPAVQGESAQAAQHQPMGLHIAVTAATVMTAALGGAQTGIPSNQNGLQSQQALANDPLTLHLAKMSRSQLSEIISELKGMATHNKDLSRQLLLSRPQLPKALFQAQIMLGMVNPQMLQMPNLRQVSDQTSQSLMNEGHLGQTQQTLVPTVAGLPPYGQSKLQFGLTPYIQEGQVSTLPHNPSVPSQLTVNPEPPLQPRIPPQHHQSNHFVQPGAGQSNLILPSIRPPTTGSFSVRPPFQQANSTVVNQQPHASFLQQPVRVGSSTVSHNIHMAGPSMPSGVSQLFSKEGDRPSNALEDWAKSSSKYSNVSFGVENTGMVHDNPESFTRPSKLTRLNDGRGLSAGTSDVPVSNGSSLVLGSSSLPVPVVPKADVRHSDQQSSQVCRAT*