AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580026488.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026488.01.T01 MTR_5g045000 99.248 266 2 0 22 287 1 266 0.0 538
MsG0580026488.01.T01 MTR_3g092110 50.403 248 120 3 33 280 65 309 2.79e-83 253
MsG0580026488.01.T01 MTR_1g028320 48.016 252 128 3 29 280 69 317 8.85e-79 242
MsG0580026488.01.T01 MTR_1g028330 48.347 242 122 3 39 280 78 316 2.12e-78 241
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026488.01.T01 AT1G13700 61.450 262 99 2 22 281 1 262 1.26e-120 346
MsG0580026488.01.T01 AT1G13700 61.450 262 99 2 22 281 1 262 1.26e-120 346
MsG0580026488.01.T01 AT1G13700 61.450 262 99 2 22 281 1 262 1.26e-120 346
MsG0580026488.01.T01 AT5G24400 46.269 268 138 2 13 280 64 325 1.22e-80 247
MsG0580026488.01.T01 AT5G24420 41.016 256 139 4 31 280 3 252 7.20e-66 206
MsG0580026488.01.T01 AT3G49360 42.400 250 135 4 35 280 7 251 2.38e-64 203
MsG0580026488.01.T01 AT5G24410 40.625 256 143 3 29 280 7 257 6.12e-62 197

Find 80 sgRNAs with CRISPR-Local

Find 351 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAAACCTCGTTGGGTTAT+TGG 0.164876 5:-38340143 MsG0580026488.01.T01:three_prime_UTR
AGCAGAATGAGATCAAATTT+TGG 0.177219 5:+38340664 None:intergenic
TGGTTCTCTCATTGATTTAA+TGG 0.181608 5:-38344522 MsG0580026488.01.T01:CDS
TTGAAAGGAAAAGAGGAAAT+TGG 0.243426 5:+38340162 None:intergenic
TTCTTTGCCCTCGCTATATC+TGG 0.271798 5:-38344545 MsG0580026488.01.T01:CDS
GGTTCTCTCATTGATTTAAT+GGG 0.279865 5:-38344521 MsG0580026488.01.T01:CDS
TGATCTCATTCTGCTTGAAT+TGG 0.283064 5:-38340656 MsG0580026488.01.T01:CDS
TCTTCTCTTTCATTGAGTGC+TGG 0.287155 5:+38340595 None:intergenic
GGACCAAGTGGTATATCTTC+TGG 0.315691 5:-38344376 MsG0580026488.01.T01:CDS
CTCAACTTCTCCAAACAAAA+AGG 0.330988 5:+38340194 None:intergenic
TCATTGAGTGCTGGGTGATT+AGG 0.331583 5:+38340604 None:intergenic
AAATAAATAAGCAGGATCTT+AGG 0.336077 5:+38340244 None:intergenic
CTTCTCTTTCATTGAGTGCT+GGG 0.341216 5:+38340596 None:intergenic
TATCTATTTCTGTGCTTCAT+AGG 0.341615 5:-38344839 MsG0580026488.01.T01:intron
ACCATTCTTGCCGGTATTGA+TGG 0.383281 5:+38340412 None:intergenic
ACTGCATGGCTTGGAACAAT+AGG 0.401120 5:+38340796 None:intergenic
AGAATGGTCCAACCAGCTAA+TGG 0.401896 5:-38340397 MsG0580026488.01.T01:CDS
TTTCCTTTCAAAACCTCGTT+GGG 0.403465 5:-38340150 MsG0580026488.01.T01:three_prime_UTR
GACCAAGTGGTATATCTTCT+GGG 0.410751 5:-38344375 MsG0580026488.01.T01:CDS
GCTGGTTGGACCATTCTTGC+CGG 0.413181 5:+38340403 None:intergenic
CAGTCCACTGTCTTGTTGTA+AGG 0.433502 5:+38344398 None:intergenic
GATCTCATTCTGCTTGAATT+GGG 0.433679 5:-38340655 MsG0580026488.01.T01:CDS
GACGAAGCTGTGCAGGATCA+TGG 0.444339 5:-38344569 MsG0580026488.01.T01:CDS
CCCATCAATACCGGCAAGAA+TGG 0.446787 5:-38340413 MsG0580026488.01.T01:CDS
TTGGATGCAGAATTGATAAC+AGG 0.446820 5:+38340511 None:intergenic
GCCGGTATTGATGGGCAATC+AGG 0.448202 5:+38340421 None:intergenic
GAATGGTCCAACCAGCTAAT+GGG 0.461681 5:-38340396 MsG0580026488.01.T01:CDS
AATGTAGCGGTGGTCGCAGC+AGG 0.467698 5:-38340490 MsG0580026488.01.T01:CDS
ACAGAAATAGATACGGAAAC+AGG 0.471007 5:+38344849 None:intergenic
ACTCAATGAAAGAGAAGAAT+GGG 0.475846 5:-38340590 MsG0580026488.01.T01:CDS
CACACCAACTTCCCATTAGC+TGG 0.479701 5:+38340385 None:intergenic
AATGTCGGACGAAGCTGTGC+AGG 0.482482 5:-38344576 MsG0580026488.01.T01:CDS
AGATGAGGTGAAAACTGTTT+TGG 0.482746 5:-38344615 MsG0580026488.01.T01:CDS
TTAATAGAAACTGCATGGCT+TGG 0.494022 5:+38340787 None:intergenic
TTTCAAAGCATGGCTCTCTC+CGG 0.502480 5:-38344680 MsG0580026488.01.T01:CDS
CCAAGAGAAAATAAATAAGC+AGG 0.503311 5:+38340236 None:intergenic
TGCTGCGACCACCGCTACAT+TGG 0.503424 5:+38340492 None:intergenic
CCATTCTTGCCGGTATTGAT+GGG 0.511722 5:+38340413 None:intergenic
ACCTGATTGCCCATCAATAC+CGG 0.513012 5:-38340422 MsG0580026488.01.T01:CDS
AAGGTGAATGTGATTCTCTC+AGG 0.517529 5:+38340535 None:intergenic
CCAACCAGCTAATGGGAAGT+TGG 0.520940 5:-38340389 MsG0580026488.01.T01:CDS
CACTCAATGAAAGAGAAGAA+TGG 0.523957 5:-38340591 MsG0580026488.01.T01:CDS
GTTCTCTCATTGATTTAATG+GGG 0.527849 5:-38344520 MsG0580026488.01.T01:intron
AGCTGCTTCTTCCGCTGACA+CGG 0.529399 5:+38340759 None:intergenic
CTGCTTGAATTGGGTACTGA+TGG 0.535232 5:-38340646 MsG0580026488.01.T01:CDS
GTTATTGGTTATGAAGATGA+TGG 0.537529 5:-38340128 MsG0580026488.01.T01:three_prime_UTR
TCCACTGTCTTGTTGTAAGG+AGG 0.540737 5:+38344401 None:intergenic
CCAACTTCCCATTAGCTGGT+TGG 0.547605 5:+38340389 None:intergenic
CATATACTAATTGTTCAAGT+CGG 0.547921 5:+38340324 None:intergenic
TGAATGTGATTCTCTCAGGT+GGG 0.549922 5:+38340539 None:intergenic
TAAAGCAGATGCTGTACTGT+TGG 0.555465 5:-38340461 MsG0580026488.01.T01:CDS
TACAAAATTAGATCTCTGCA+AGG 0.559618 5:+38340296 None:intergenic
TGAGTTTGTCATCCGACAGT+TGG 0.564315 5:-38340728 MsG0580026488.01.T01:CDS
AATGTGATTCTCTCAGGTGG+GGG 0.565647 5:+38340541 None:intergenic
GTGAATGTGATTCTCTCAGG+TGG 0.569973 5:+38340538 None:intergenic
CATGCATCAATAGCCACAAA+CGG 0.570122 5:+38340060 None:intergenic
TGAGTACATTAATCAAATGT+CGG 0.571308 5:-38344591 MsG0580026488.01.T01:CDS
ACAAAATTAGATCTCTGCAA+GGG 0.573932 5:+38340297 None:intergenic
GAATGTGATTCTCTCAGGTG+GGG 0.575071 5:+38340540 None:intergenic
TTTGCCCTCGCTATATCTGG+TGG 0.584536 5:-38344542 MsG0580026488.01.T01:CDS
CAGCTAATGGGAAGTTGGTG+TGG 0.586074 5:-38340384 MsG0580026488.01.T01:CDS
TATTAACGATTCCGTGTCAG+CGG 0.589583 5:-38340770 MsG0580026488.01.T01:CDS
ATGAAGCACAGAAATAGATA+CGG 0.600922 5:+38344842 None:intergenic
CTGTTGGCAGTAGATGAGAT+TGG 0.601845 5:-38340445 MsG0580026488.01.T01:CDS
TTCTGCATCCAATGTAGCGG+TGG 0.608747 5:-38340500 MsG0580026488.01.T01:CDS
CACGGGTTCTCACCAACTGT+CGG 0.609360 5:+38340716 None:intergenic
AGCCCAGAAGATATACCACT+TGG 0.612710 5:+38344373 None:intergenic
TCTCAGATGCGTTGACAACA+CGG 0.617255 5:+38340698 None:intergenic
TGCAGAATTGATAACAGGCA+AGG 0.619249 5:+38340516 None:intergenic
CAAAATTAGATCTCTGCAAG+GGG 0.624560 5:+38340298 None:intergenic
CTTACAACAAGACAGTGGAC+TGG 0.628974 5:-38344397 MsG0580026488.01.T01:CDS
CTCAGATGCGTTGACAACAC+GGG 0.630436 5:+38340699 None:intergenic
AATCGTTAATAGAAACTGCA+TGG 0.634847 5:+38340782 None:intergenic
TGGGTGATTAGGAAATAAAG+AGG 0.654033 5:+38340615 None:intergenic
GAGAACCACCAGATATAGCG+AGG 0.663045 5:+38344537 None:intergenic
CAATTCTGCATCCAATGTAG+CGG 0.666898 5:-38340503 MsG0580026488.01.T01:CDS
AGACAGTGGACTGGACCAAG+TGG 0.681123 5:-38344388 MsG0580026488.01.T01:CDS
AGAACCACCAGATATAGCGA+GGG 0.687479 5:+38344538 None:intergenic
ACCTCCTTACAACAAGACAG+TGG 0.722458 5:-38344402 MsG0580026488.01.T01:CDS
TCATAACCAATAACCCAACG+AGG 0.758224 5:+38340137 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTAAATTATATTCAATTA+TGG - Chr5:38344069-38344088 MsG0580026488.01.T01:intron 10.0%
!! ATCTGTAAAATGTAATAATT+AGG - Chr5:38343601-38343620 MsG0580026488.01.T01:intron 15.0%
!! TAAATTGACATTCAAAATAA+AGG + Chr5:38340968-38340987 None:intergenic 15.0%
!! TTCTCTACAAAATAATAATT+TGG - Chr5:38341000-38341019 MsG0580026488.01.T01:intron 15.0%
!!! TTTAAGATTTATGTATTATC+AGG + Chr5:38342002-38342021 None:intergenic 15.0%
!! AACATAAAAAGAAATGATTC+AGG - Chr5:38343892-38343911 MsG0580026488.01.T01:intron 20.0%
!! AAGTTTAAGAAAATACTCAA+AGG + Chr5:38343378-38343397 None:intergenic 20.0%
!! ATAATAAAGCAATGAAACAA+AGG + Chr5:38340150-38340169 None:intergenic 20.0%
!! CTTATAGAGAAAACTATATA+TGG + Chr5:38342294-38342313 None:intergenic 20.0%
!! TATCAAAATTAATTCAACAG+AGG - Chr5:38342453-38342472 MsG0580026488.01.T01:intron 20.0%
!! TTACAATCAATTGAACAAAA+AGG + Chr5:38341115-38341134 None:intergenic 20.0%
!!! AATTTTGTATGTATTGTTGA+GGG - Chr5:38344641-38344660 MsG0580026488.01.T01:CDS 20.0%
!!! AGTTCTTCAGATATTATTTT+TGG + Chr5:38341962-38341981 None:intergenic 20.0%
!!! ATCTAATTGTTGTTTTTTGT+TGG - Chr5:38340197-38340216 MsG0580026488.01.T01:three_prime_UTR 20.0%
!!! GAATCATTTCTTTTTATGTT+GGG + Chr5:38343892-38343911 None:intergenic 20.0%
!!! GTTTCTATGATTTTATGATT+TGG - Chr5:38340455-38340474 MsG0580026488.01.T01:CDS 20.0%
!!! TAATTTTGTATGTATTGTTG+AGG - Chr5:38344640-38344659 MsG0580026488.01.T01:CDS 20.0%
!!! TGAATCATTTCTTTTTATGT+TGG + Chr5:38343893-38343912 None:intergenic 20.0%
!!! TTACAATTAGAATTTTATGC+TGG - Chr5:38341365-38341384 MsG0580026488.01.T01:intron 20.0%
!!! TTTAAGCTTTATGTAACATA+TGG - Chr5:38343518-38343537 MsG0580026488.01.T01:intron 20.0%
!!! TTTTGTTCAATTGATTGTAA+TGG - Chr5:38341115-38341134 MsG0580026488.01.T01:intron 20.0%
! AAATAAATAAGCAGGATCTT+AGG + Chr5:38344682-38344701 None:intergenic 25.0%
! AGTACAATATGTATTGTTTC+AGG - Chr5:38343305-38343324 MsG0580026488.01.T01:intron 25.0%
! ATCAACTTGATAAACTGATT+CGG - Chr5:38342030-38342049 MsG0580026488.01.T01:intron 25.0%
! ATTAAAGAATGAGGAAGAAT+GGG - Chr5:38343406-38343425 MsG0580026488.01.T01:intron 25.0%
! ATTTATGTATTATCAGGATG+TGG + Chr5:38341996-38342015 None:intergenic 25.0%
! CATATACTAATTGTTCAAGT+CGG + Chr5:38344602-38344621 None:intergenic 25.0%
! CTTTATATACACAAATGAAG+CGG + Chr5:38340684-38340703 None:intergenic 25.0%
! GGAAAAAGAATATTAAACTG+AGG - Chr5:38343456-38343475 MsG0580026488.01.T01:intron 25.0%
! GGAAAACAACAAACAAAATA+GGG - Chr5:38340799-38340818 MsG0580026488.01.T01:CDS 25.0%
! GTACAATATGTATTGTTTCA+GGG - Chr5:38343306-38343325 MsG0580026488.01.T01:intron 25.0%
! TATGTAAGCATTAAAGAATG+AGG - Chr5:38343397-38343416 MsG0580026488.01.T01:intron 25.0%
! TGAGTACATTAATCAAATGT+CGG - Chr5:38340332-38340351 MsG0580026488.01.T01:CDS 25.0%
! TTAGATTGTTCTTTAAGCTT+AGG - Chr5:38343435-38343454 MsG0580026488.01.T01:intron 25.0%
! TTTACAGATCCAACTATAAA+GGG + Chr5:38343590-38343609 None:intergenic 25.0%
! TTTATGTATTATCAGGATGT+GGG + Chr5:38341995-38342014 None:intergenic 25.0%
!! ATCTGATAAATCTTTTGCTT+TGG - Chr5:38343967-38343986 MsG0580026488.01.T01:intron 25.0%
!! TAAAGAAGTCTTTTTGTCTA+AGG - Chr5:38340623-38340642 MsG0580026488.01.T01:CDS 25.0%
!! TGCTGAACTTAACATTTTAA+TGG + Chr5:38343931-38343950 None:intergenic 25.0%
!! TTTTACAGATCCAACTATAA+AGG + Chr5:38343591-38343610 None:intergenic 25.0%
!!! CAAAGGTGTTTGTTTTATAT+AGG - Chr5:38342926-38342945 MsG0580026488.01.T01:intron 25.0%
!!! CTAGTTGATTTGGAATTATA+GGG - Chr5:38342370-38342389 MsG0580026488.01.T01:intron 25.0%
!!! TACATTTTTAATTATCGCCT+AGG + Chr5:38343759-38343778 None:intergenic 25.0%
!!! TATTGAAGTTTTTCAAAGCA+TGG - Chr5:38340233-38340252 MsG0580026488.01.T01:three_prime_UTR 25.0%
!!! TCTAGTTGATTTGGAATTAT+AGG - Chr5:38342369-38342388 MsG0580026488.01.T01:intron 25.0%
!!! TCTATGATTTTATGATTTGG+TGG - Chr5:38340458-38340477 MsG0580026488.01.T01:CDS 25.0%
!!! TTTTTTCCCGATCTATAAAT+CGG + Chr5:38341298-38341317 None:intergenic 25.0%
AAAATGGGAATGGAAGAATA+GGG + Chr5:38342659-38342678 None:intergenic 30.0%
AACTGTTGATCAAGAATTGA+AGG + Chr5:38341067-38341086 None:intergenic 30.0%
AATCGTTAATAGAAACTGCA+TGG + Chr5:38344144-38344163 None:intergenic 30.0%
AATGATGAATATACTCTAGC+TGG - Chr5:38343551-38343570 MsG0580026488.01.T01:intron 30.0%
ACAAAATTAGATCTCTGCAA+GGG + Chr5:38344629-38344648 None:intergenic 30.0%
ACTACGATGAGTATAAGAAA+TGG + Chr5:38342692-38342711 None:intergenic 30.0%
ACTATATATGGCACCAATTA+AGG + Chr5:38342282-38342301 None:intergenic 30.0%
ACTCAATGAAAGAGAAGAAT+GGG - Chr5:38344333-38344352 MsG0580026488.01.T01:CDS 30.0%
ACTGTTGATCAAGAATTGAA+GGG + Chr5:38341066-38341085 None:intergenic 30.0%
AGTGGAAAGATGGATATAAT+TGG + Chr5:38343056-38343075 None:intergenic 30.0%
AGTTAAATAAGTAGCTACAC+TGG - Chr5:38341764-38341783 MsG0580026488.01.T01:intron 30.0%
AGTTTCTGTGATTTCTTATG+TGG - Chr5:38341083-38341102 MsG0580026488.01.T01:intron 30.0%
ATAACTCAATGCAGAATCAA+AGG + Chr5:38342100-38342119 None:intergenic 30.0%
ATACTGAATTCTTCAAACAC+GGG + Chr5:38342736-38342755 None:intergenic 30.0%
ATGAAGCACAGAAATAGATA+CGG + Chr5:38340084-38340103 None:intergenic 30.0%
ATGGAATTAAAAGACAGACA+TGG + Chr5:38344024-38344043 None:intergenic 30.0%
ATTTCAGATCGCAAAATGAA+GGG + Chr5:38342486-38342505 None:intergenic 30.0%
CATACTGAATTCTTCAAACA+CGG + Chr5:38342737-38342756 None:intergenic 30.0%
CATTAAAGAATGAGGAAGAA+TGG - Chr5:38343405-38343424 MsG0580026488.01.T01:intron 30.0%
CCAAGAGAAAATAAATAAGC+AGG + Chr5:38344690-38344709 None:intergenic 30.0%
CTACGATGAGTATAAGAAAT+GGG + Chr5:38342691-38342710 None:intergenic 30.0%
GGGAAAACAACAAACAAAAT+AGG - Chr5:38340798-38340817 MsG0580026488.01.T01:CDS 30.0%
TAAAATGGGAATGGAAGAAT+AGG + Chr5:38342660-38342679 None:intergenic 30.0%
TAACATTCAACTATACAAGC+AGG + Chr5:38341035-38341054 None:intergenic 30.0%
TACAAAATTAGATCTCTGCA+AGG + Chr5:38344630-38344649 None:intergenic 30.0%
TATTTCAGATCGCAAAATGA+AGG + Chr5:38342487-38342506 None:intergenic 30.0%
TCTAGTAGTCAAACTAAACA+AGG + Chr5:38343492-38343511 None:intergenic 30.0%
TGAGAAACAATCACAAAAGA+AGG + Chr5:38340775-38340794 None:intergenic 30.0%
TGCAGAAAATCTAGTTGATT+TGG - Chr5:38342360-38342379 MsG0580026488.01.T01:intron 30.0%
TTAGAGAAACCCTTTATAGT+TGG - Chr5:38343578-38343597 MsG0580026488.01.T01:intron 30.0%
TTATGTATTATCAGGATGTG+GGG + Chr5:38341994-38342013 None:intergenic 30.0%
TTGAAAGGAAAAGAGGAAAT+TGG + Chr5:38344764-38344783 None:intergenic 30.0%
TTTGGGTGATTCTGAATTAA+AGG - Chr5:38342807-38342826 MsG0580026488.01.T01:intron 30.0%
! AAAAACTTCTCTGCATTTTC+TGG + Chr5:38343098-38343117 None:intergenic 30.0%
! AGCAGAATGAGATCAAATTT+TGG + Chr5:38344262-38344281 None:intergenic 30.0%
! ATCTACATGTCTATTTCTCT+TGG - Chr5:38343351-38343370 MsG0580026488.01.T01:intron 30.0%
! ATTAGAATTTTATGCTGGCA+AGG - Chr5:38341370-38341389 MsG0580026488.01.T01:intron 30.0%
! CATTTTTCATGTTAGGAAGT+AGG - Chr5:38343812-38343831 MsG0580026488.01.T01:intron 30.0%
! GCAGAATGAGATCAAATTTT+GGG + Chr5:38344261-38344280 None:intergenic 30.0%
! GTTATTGGTTATGAAGATGA+TGG - Chr5:38344795-38344814 MsG0580026488.01.T01:intron 30.0%
! TACGCTTCGTAAAATTTTCT+TGG - Chr5:38340904-38340923 MsG0580026488.01.T01:intron 30.0%
! TTTGTGATTGTTTCTCAGAA+GGG - Chr5:38340778-38340797 MsG0580026488.01.T01:CDS 30.0%
! TTTTTCCCGATCTATAAATC+GGG + Chr5:38341297-38341316 None:intergenic 30.0%
!! ATTAAAGAGAAGTGCTGATT+AGG + Chr5:38342133-38342152 None:intergenic 30.0%
!! CCTGCTTATTTATTTTCTCT+TGG - Chr5:38344687-38344706 MsG0580026488.01.T01:CDS 30.0%
!! GAGTTGATCGTTTGAATTTT+AGG - Chr5:38341610-38341629 MsG0580026488.01.T01:intron 30.0%
!! GGTTCTCTCATTGATTTAAT+GGG - Chr5:38340402-38340421 MsG0580026488.01.T01:CDS 30.0%
!! GTTCTCTCATTGATTTAATG+GGG - Chr5:38340403-38340422 MsG0580026488.01.T01:CDS 30.0%
!! TATCTATTTCTGTGCTTCAT+AGG - Chr5:38340084-38340103 MsG0580026488.01.T01:three_prime_UTR 30.0%
!! TCGTGCTTTCTTTAATTTTC+CGG + Chr5:38342423-38342442 None:intergenic 30.0%
!! TGGTTCTCTCATTGATTTAA+TGG - Chr5:38340401-38340420 MsG0580026488.01.T01:CDS 30.0%
!! TTTTGGAAGAAAACTGCAAA+AGG + Chr5:38341945-38341964 None:intergenic 30.0%
!! TTTTGTGATTGTTTCTCAGA+AGG - Chr5:38340777-38340796 MsG0580026488.01.T01:CDS 30.0%
!!! ATTTTAGAGCTTCCACATAT+GGG + Chr5:38342325-38342344 None:intergenic 30.0%
!!! TAATGCGCACATTTTTTTCA+GGG + Chr5:38341799-38341818 None:intergenic 30.0%
!!! TGATTTTATGATTTGGTGGT+TGG - Chr5:38340462-38340481 MsG0580026488.01.T01:CDS 30.0%
!!! TGGTTTTTGGTTTCCTTAAT+TGG - Chr5:38342266-38342285 MsG0580026488.01.T01:intron 30.0%
AAAATCCCCTAATCTTACCT+AGG - Chr5:38341316-38341335 MsG0580026488.01.T01:intron 35.0%
AAAATGCACCTCTAACAACA+AGG + Chr5:38343798-38343817 None:intergenic 35.0%
AAATCAGTCTCGAGAGTAAA+CGG + Chr5:38340709-38340728 None:intergenic 35.0%
AAATGCACCTCTAACAACAA+GGG + Chr5:38343797-38343816 None:intergenic 35.0%
AAATGGGACGTGGAATAAAA+TGG + Chr5:38342675-38342694 None:intergenic 35.0%
AACAGTTGTGTTCCATTCTA+AGG - Chr5:38341139-38341158 MsG0580026488.01.T01:intron 35.0%
AACTCAAGCAAATGACTAAG+AGG + Chr5:38341168-38341187 None:intergenic 35.0%
AAGTGACCTAGGTAAGATTA+GGG + Chr5:38341325-38341344 None:intergenic 35.0%
AATACCAAGAACATGGATCT+TGG + Chr5:38343689-38343708 None:intergenic 35.0%
AATGGGACGTGGAATAAAAT+GGG + Chr5:38342674-38342693 None:intergenic 35.0%
ACAACAAACAAAATAGGGCT+AGG - Chr5:38340804-38340823 MsG0580026488.01.T01:intron 35.0%
ACAGAAATAGATACGGAAAC+AGG + Chr5:38340077-38340096 None:intergenic 35.0%
ACTACAGCACAAGGAAATAT+CGG + Chr5:38343724-38343743 None:intergenic 35.0%
ACTTCACAAAATCTACCAGA+CGG + Chr5:38341502-38341521 None:intergenic 35.0%
AGAATCACCCAAAAATGTTC+CGG + Chr5:38342800-38342819 None:intergenic 35.0%
AGAGAAGAATACCAAGAACA+TGG + Chr5:38343696-38343715 None:intergenic 35.0%
AGATGACTTTCTAACCTTAG+CGG - Chr5:38341435-38341454 MsG0580026488.01.T01:intron 35.0%
AGGATATCTATGAATGCCAA+AGG + Chr5:38342080-38342099 None:intergenic 35.0%
ATAAAAACAGAGGAGAGTTG+AGG - Chr5:38340271-38340290 MsG0580026488.01.T01:three_prime_UTR 35.0%
ATAACCAACAAGTGGAAAGA+TGG + Chr5:38343066-38343085 None:intergenic 35.0%
ATAACTACAATGCTACGCAA+TGG - Chr5:38342526-38342545 MsG0580026488.01.T01:intron 35.0%
ATATCCATCTTTCCACTTGT+TGG - Chr5:38343059-38343078 MsG0580026488.01.T01:intron 35.0%
CAAAATTAGATCTCTGCAAG+GGG + Chr5:38344628-38344647 None:intergenic 35.0%
CAAACGATCAACTCAAGATT+TGG + Chr5:38341604-38341623 None:intergenic 35.0%
CAACAAACAAAATAGGGCTA+GGG - Chr5:38340805-38340824 MsG0580026488.01.T01:intron 35.0%
CACTCAATGAAAGAGAAGAA+TGG - Chr5:38344332-38344351 MsG0580026488.01.T01:CDS 35.0%
CTCAACTTCTCCAAACAAAA+AGG + Chr5:38344732-38344751 None:intergenic 35.0%
CTGTTGATCAAGAATTGAAG+GGG + Chr5:38341065-38341084 None:intergenic 35.0%
GAAACCAAAAACCATAGAAC+AGG + Chr5:38342260-38342279 None:intergenic 35.0%
GATCTCATTCTGCTTGAATT+GGG - Chr5:38344268-38344287 MsG0580026488.01.T01:intron 35.0%
TAAACACACCTATACCTCTT+GGG - Chr5:38342194-38342213 MsG0580026488.01.T01:intron 35.0%
TAATTCCATGAGATTGTACC+TGG - Chr5:38344035-38344054 MsG0580026488.01.T01:intron 35.0%
TATGTATTATCAGGATGTGG+GGG + Chr5:38341993-38342012 None:intergenic 35.0%
TGAATGCCAAAGGATAGAAA+AGG + Chr5:38342070-38342089 None:intergenic 35.0%
TGATCTCATTCTGCTTGAAT+TGG - Chr5:38344267-38344286 MsG0580026488.01.T01:intron 35.0%
TGGGTGATTAGGAAATAAAG+AGG + Chr5:38344311-38344330 None:intergenic 35.0%
TGGTATAGATAACCAACAAG+TGG + Chr5:38343074-38343093 None:intergenic 35.0%
TGGTTAATCTCAATCCAACT+AGG + Chr5:38341584-38341603 None:intergenic 35.0%
TGTTGTCTCGAAAAATCATG+AGG - Chr5:38340581-38340600 MsG0580026488.01.T01:CDS 35.0%
TTAAACACACCTATACCTCT+TGG - Chr5:38342193-38342212 MsG0580026488.01.T01:intron 35.0%
TTAATAGAAACTGCATGGCT+TGG + Chr5:38344139-38344158 None:intergenic 35.0%
TTCTTGAAAACTGTAGGTTG+AGG - Chr5:38342222-38342241 MsG0580026488.01.T01:intron 35.0%
TTTCAGATCGCAAAATGAAG+GGG + Chr5:38342485-38342504 None:intergenic 35.0%
TTTCCTTTCAAAACCTCGTT+GGG - Chr5:38344773-38344792 MsG0580026488.01.T01:intron 35.0%
! AAGATTGCAGCTTTGATACT+TGG - Chr5:38341680-38341699 MsG0580026488.01.T01:intron 35.0%
! AGATGAGGTGAAAACTGTTT+TGG - Chr5:38340308-38340327 MsG0580026488.01.T01:three_prime_UTR 35.0%
! AGATTGCAGCTTTGATACTT+GGG - Chr5:38341681-38341700 MsG0580026488.01.T01:intron 35.0%
! ATGTCCTGTTCTATGGTTTT+TGG - Chr5:38342253-38342272 MsG0580026488.01.T01:intron 35.0%
! CAGCTAATTTAGTTTCAGAG+AGG - Chr5:38343230-38343249 MsG0580026488.01.T01:intron 35.0%
! CCAAAACACAAGTTGAATCT+AGG + Chr5:38341912-38341931 None:intergenic 35.0%
! CCTAGATTCAACTTGTGTTT+TGG - Chr5:38341909-38341928 MsG0580026488.01.T01:intron 35.0%
! CTTTGCTTTGCCTTTTTGTT+TGG - Chr5:38344719-38344738 MsG0580026488.01.T01:intron 35.0%
! GATTTTTGACAGTGTAGATG+AGG - Chr5:38340293-38340312 MsG0580026488.01.T01:three_prime_UTR 35.0%
! GGTATTCCTTTTCTATCCTT+TGG - Chr5:38342061-38342080 MsG0580026488.01.T01:intron 35.0%
! TCAAACACGGGTTCAATTTT+GGG + Chr5:38342724-38342743 None:intergenic 35.0%
! TGAATCTGCAGAAGAGATTT+TGG - Chr5:38341199-38341218 MsG0580026488.01.T01:intron 35.0%
! TGATATCTTGCCAAGTCTTT+TGG + Chr5:38343150-38343169 None:intergenic 35.0%
! TTCAAACACGGGTTCAATTT+TGG + Chr5:38342725-38342744 None:intergenic 35.0%
! TTGGATGCAGAATTGATAAC+AGG + Chr5:38344415-38344434 None:intergenic 35.0%
! TTTTCCTTTCAAAACCTCGT+TGG - Chr5:38344772-38344791 MsG0580026488.01.T01:intron 35.0%
!! ACTTTTTCTTTTGCCGTTTG+TGG - Chr5:38344850-38344869 MsG0580026488.01.T01:CDS 35.0%
!! AGAAGAGCACCATATAAATG+TGG + Chr5:38341559-38341578 None:intergenic 35.0%
!! AGAGGTGCATTTTTCATGTT+AGG - Chr5:38343805-38343824 MsG0580026488.01.T01:intron 35.0%
!! AGCTCTAAAATCTTGATGAC+TGG - Chr5:38342334-38342353 MsG0580026488.01.T01:intron 35.0%
!! CGTGCTTTCTTTAATTTTCC+GGG + Chr5:38342422-38342441 None:intergenic 35.0%
!! CTCTCTGAAACTAAATTAGC+TGG + Chr5:38343232-38343251 None:intergenic 35.0%
!! GAAGAGCACCATATAAATGT+GGG + Chr5:38341558-38341577 None:intergenic 35.0%
!! GAAGTCTTTTTGTCTAAGGT+TGG - Chr5:38340627-38340646 MsG0580026488.01.T01:CDS 35.0%
!! GCTCTAAAATCTTGATGACT+GGG - Chr5:38342335-38342354 MsG0580026488.01.T01:intron 35.0%
!! GTTGATTTGGAATTATAGGG+TGG - Chr5:38342373-38342392 MsG0580026488.01.T01:intron 35.0%
!! TAAACTGATTCGGATGTTGT+CGG - Chr5:38342040-38342059 MsG0580026488.01.T01:intron 35.0%
!! TCAAAATAAAGGAGCATCGA+AGG + Chr5:38340957-38340976 None:intergenic 35.0%
!!! CTAATGCGCACATTTTTTTC+AGG + Chr5:38341800-38341819 None:intergenic 35.0%
!!! GATTTTAGAGCTTCCACATA+TGG + Chr5:38342326-38342345 None:intergenic 35.0%
!!! TCCTCTGTTTTTATGATCAC+CGG + Chr5:38340265-38340284 None:intergenic 35.0%
!!! TTTTAGAGCTTCCACATATG+GGG + Chr5:38342324-38342343 None:intergenic 35.0%
AAACACACCTATACCTCTTG+GGG - Chr5:38342195-38342214 MsG0580026488.01.T01:intron 40.0%
AAGGTGAATGTGATTCTCTC+AGG + Chr5:38344391-38344410 None:intergenic 40.0%
ACCATAGAACAGGACATATC+CGG + Chr5:38342250-38342269 None:intergenic 40.0%
ACCTTTGTGTAGTCAAGACA+CGG + Chr5:38342913-38342932 None:intergenic 40.0%
ACTAAGAGGCAACCTTAGAA+TGG + Chr5:38341154-38341173 None:intergenic 40.0%
ACTACAGAAAGAAGTGACCT+AGG + Chr5:38341336-38341355 None:intergenic 40.0%
AGACTATCCTCTGCACTTTA+GGG + Chr5:38342764-38342783 None:intergenic 40.0%
AGTGACCTAGGTAAGATTAG+GGG + Chr5:38341324-38341343 None:intergenic 40.0%
ATACTGTCCAGTCACATACT+TGG + Chr5:38341228-38341247 None:intergenic 40.0%
ATTTGCTTGAGTTACACCAG+TGG - Chr5:38341175-38341194 MsG0580026488.01.T01:intron 40.0%
CAATTCTGCATCCAATGTAG+CGG - Chr5:38344420-38344439 MsG0580026488.01.T01:intron 40.0%
CACGAGAAAAATGCAACTCA+GGG + Chr5:38343851-38343870 None:intergenic 40.0%
CAGACATGGAGAGACAAAAA+AGG + Chr5:38344010-38344029 None:intergenic 40.0%
CTAGGACCCGATTTATAGAT+CGG - Chr5:38341288-38341307 MsG0580026488.01.T01:intron 40.0%
CTTACAAGATCGTGACTGAA+AGG - Chr5:38342560-38342579 MsG0580026488.01.T01:intron 40.0%
CTTCTCTTTCATTGAGTGCT+GGG + Chr5:38344330-38344349 None:intergenic 40.0%
CTTTCAGTCACGATCTTGTA+AGG + Chr5:38342562-38342581 None:intergenic 40.0%
GAAGTGACCTAGGTAAGATT+AGG + Chr5:38341326-38341345 None:intergenic 40.0%
GACATGCTTGTCACATTAAC+AGG - Chr5:38344102-38344121 MsG0580026488.01.T01:intron 40.0%
GACCAAGTGGTATATCTTCT+GGG - Chr5:38340548-38340567 MsG0580026488.01.T01:CDS 40.0%
GACGTGGAATAAAATGGGAA+TGG + Chr5:38342669-38342688 None:intergenic 40.0%
GAGAAAACAGAGACATGAGA+TGG - Chr5:38342882-38342901 MsG0580026488.01.T01:intron 40.0%
GAGTATCATGTGTTGCACAA+TGG - Chr5:38343272-38343291 MsG0580026488.01.T01:intron 40.0%
GATGACTTTCTAACCTTAGC+GGG - Chr5:38341436-38341455 MsG0580026488.01.T01:intron 40.0%
GCTTATGTATTCTTGCCACT+TGG - Chr5:38340843-38340862 MsG0580026488.01.T01:intron 40.0%
GGTCTCTTCTTGAAAACTGT+AGG - Chr5:38342216-38342235 MsG0580026488.01.T01:intron 40.0%
GTCGCAATCCCACATTTATA+TGG - Chr5:38341547-38341566 MsG0580026488.01.T01:intron 40.0%
GTTTACTCTCGAGACTGATT+TGG - Chr5:38340708-38340727 MsG0580026488.01.T01:CDS 40.0%
TAAAGCAGATGCTGTACTGT+TGG - Chr5:38344462-38344481 MsG0580026488.01.T01:intron 40.0%
TAGGACCCGATTTATAGATC+GGG - Chr5:38341289-38341308 MsG0580026488.01.T01:intron 40.0%
TAGTCTCATCTAGATGACTC+CGG - Chr5:38342778-38342797 MsG0580026488.01.T01:intron 40.0%
TATAGGGTGGAAACCAGAAA+TGG - Chr5:38342386-38342405 MsG0580026488.01.T01:intron 40.0%
TATGTGACTGGACAGTATGA+CGG - Chr5:38341230-38341249 MsG0580026488.01.T01:intron 40.0%
TATTAACGATTCCGTGTCAG+CGG - Chr5:38344153-38344172 MsG0580026488.01.T01:intron 40.0%
TCAAAACCTCGTTGGGTTAT+TGG - Chr5:38344780-38344799 MsG0580026488.01.T01:intron 40.0%
TCATAACCAATAACCCAACG+AGG + Chr5:38344789-38344808 None:intergenic 40.0%
TCCGGTGATCATAAAAACAG+AGG - Chr5:38340261-38340280 MsG0580026488.01.T01:three_prime_UTR 40.0%
TCTTCTCTTTCATTGAGTGC+TGG + Chr5:38344331-38344350 None:intergenic 40.0%
TGAATGTGATTCTCTCAGGT+GGG + Chr5:38344387-38344406 None:intergenic 40.0%
TGAGTATAAGAAATGGGACG+TGG + Chr5:38342685-38342704 None:intergenic 40.0%
TGTTAGCACTAGCAGTTATC+AGG + Chr5:38341409-38341428 None:intergenic 40.0%
TGTTCCAAGATCCATGTTCT+TGG - Chr5:38343682-38343701 MsG0580026488.01.T01:intron 40.0%
TTAACTGAGTCGTATGTCTG+AGG - Chr5:38341860-38341879 MsG0580026488.01.T01:intron 40.0%
TTGATCCAGGTACAATCTCA+TGG + Chr5:38344043-38344062 None:intergenic 40.0%
TTGTATGGCTTTCGACACAT+TGG - Chr5:38341656-38341675 MsG0580026488.01.T01:intron 40.0%
TTGTGCAACACATGATACTC+TGG + Chr5:38343272-38343291 None:intergenic 40.0%
! AACTTTTCAGAAAGACCGAG+TGG - Chr5:38343124-38343143 MsG0580026488.01.T01:intron 40.0%
! AGATGACTCCGGAACATTTT+TGG - Chr5:38342789-38342808 MsG0580026488.01.T01:intron 40.0%
! ATGACGGGATTTCTCAAAGT+GGG - Chr5:38341246-38341265 MsG0580026488.01.T01:intron 40.0%
! ATTCAGTTTTCTCAGCCAAG+TGG + Chr5:38340861-38340880 None:intergenic 40.0%
! GATGACTCCGGAACATTTTT+GGG - Chr5:38342790-38342809 MsG0580026488.01.T01:intron 40.0%
! TATGACGGGATTTCTCAAAG+TGG - Chr5:38341245-38341264 MsG0580026488.01.T01:intron 40.0%
! TGCAGAATTGATAACAGGCA+AGG + Chr5:38344410-38344429 None:intergenic 40.0%
!! ACTGTTTCCCTTGTTGTTAG+AGG - Chr5:38343787-38343806 MsG0580026488.01.T01:intron 40.0%
!! GAAACCAGAAATGGATTGGT+GGG - Chr5:38342395-38342414 MsG0580026488.01.T01:intron 40.0%
!! GCTAAAAGCGTTGATTCTGT+TGG - Chr5:38342855-38342874 MsG0580026488.01.T01:intron 40.0%
!! GGAAGAATAGGGATTGGTTT+CGG + Chr5:38342648-38342667 None:intergenic 40.0%
!!! AACTTGTGTTTTGGCCTTTC+GGG - Chr5:38341918-38341937 MsG0580026488.01.T01:intron 40.0%
!!! CAACTTGTGTTTTGGCCTTT+CGG - Chr5:38341917-38341936 MsG0580026488.01.T01:intron 40.0%
!!! CGAGGTTTTGAAAGGAAAAG+AGG + Chr5:38344771-38344790 None:intergenic 40.0%
!!! TAACCCAACGAGGTTTTGAA+AGG + Chr5:38344779-38344798 None:intergenic 40.0%
AAACTGCAAAAGGTCCCGAA+AGG + Chr5:38341935-38341954 None:intergenic 45.0%
AAATGTGGGATTGCGACCTA+TGG + Chr5:38341544-38341563 None:intergenic 45.0%
AATGTGATTCTCTCAGGTGG+GGG + Chr5:38344385-38344404 None:intergenic 45.0%
ACCGGATATGTCCTGTTCTA+TGG - Chr5:38342246-38342265 MsG0580026488.01.T01:intron 45.0%
ACCGTGTCTTGACTACACAA+AGG - Chr5:38342909-38342928 MsG0580026488.01.T01:intron 45.0%
ACCTCCTTACAACAAGACAG+TGG - Chr5:38340521-38340540 MsG0580026488.01.T01:CDS 45.0%
ACCTGATTGCCCATCAATAC+CGG - Chr5:38344501-38344520 MsG0580026488.01.T01:intron 45.0%
ACTAGGATAGTGCAACACCA+TGG - Chr5:38341472-38341491 MsG0580026488.01.T01:intron 45.0%
AGAACCACCAGATATAGCGA+GGG + Chr5:38340388-38340407 None:intergenic 45.0%
AGAATGGTCCAACCAGCTAA+TGG - Chr5:38344526-38344545 MsG0580026488.01.T01:CDS 45.0%
AGACTAGCAGTGAGGAACTT+TGG - Chr5:38341723-38341742 MsG0580026488.01.T01:intron 45.0%
AGCCCAGAAGATATACCACT+TGG + Chr5:38340553-38340572 None:intergenic 45.0%
ATGAGTTCCCTAAAGTGCAG+AGG - Chr5:38342754-38342773 MsG0580026488.01.T01:intron 45.0%
ATGTGACTGGACAGTATGAC+GGG - Chr5:38341231-38341250 MsG0580026488.01.T01:intron 45.0%
CACGATCTTGTAAGGAGCAA+AGG + Chr5:38342554-38342573 None:intergenic 45.0%
CTGTTGGCAGTAGATGAGAT+TGG - Chr5:38344478-38344497 MsG0580026488.01.T01:intron 45.0%
CTTACAACAAGACAGTGGAC+TGG - Chr5:38340526-38340545 MsG0580026488.01.T01:CDS 45.0%
GAATGGTCCAACCAGCTAAT+GGG - Chr5:38344527-38344546 MsG0580026488.01.T01:CDS 45.0%
GAATGTGATTCTCTCAGGTG+GGG + Chr5:38344386-38344405 None:intergenic 45.0%
GACTAGCAGTGAGGAACTTT+GGG - Chr5:38341724-38341743 MsG0580026488.01.T01:intron 45.0%
GAGACTATCCTCTGCACTTT+AGG + Chr5:38342765-38342784 None:intergenic 45.0%
GCACGAGAAAAATGCAACTC+AGG + Chr5:38343852-38343871 None:intergenic 45.0%
GCATCAGCTTGACAGTTGTA+TGG - Chr5:38341641-38341660 MsG0580026488.01.T01:intron 45.0%
GGACCAAGTGGTATATCTTC+TGG - Chr5:38340547-38340566 MsG0580026488.01.T01:CDS 45.0%
GGGAATGGAAGAATAGGGAT+TGG + Chr5:38342654-38342673 None:intergenic 45.0%
GGTGGAAACCAGAAATGGAT+TGG - Chr5:38342391-38342410 MsG0580026488.01.T01:intron 45.0%
GTAGTAGCGCTATAACACCT+AGG - Chr5:38343739-38343758 MsG0580026488.01.T01:intron 45.0%
GTGAATGTGATTCTCTCAGG+TGG + Chr5:38344388-38344407 None:intergenic 45.0%
GTTAGGAAGTAGGCACCATT+TGG - Chr5:38343822-38343841 MsG0580026488.01.T01:intron 45.0%
TAAGCCATTGTCCCCATATG+TGG - Chr5:38342310-38342329 MsG0580026488.01.T01:intron 45.0%
TATAGCGCTACTACAGCACA+AGG + Chr5:38343733-38343752 None:intergenic 45.0%
TCTTCTGCAGATTCAACCAC+TGG + Chr5:38341194-38341213 None:intergenic 45.0%
TGAGTTTGTCATCCGACAGT+TGG - Chr5:38344195-38344214 MsG0580026488.01.T01:intron 45.0%
TGCAACTCAGGGTTACCAAA+TGG + Chr5:38343840-38343859 None:intergenic 45.0%
TTCTTTGCCCTCGCTATATC+TGG - Chr5:38340378-38340397 MsG0580026488.01.T01:CDS 45.0%
TTGGCAACCAAGTATGTGAC+TGG - Chr5:38341218-38341237 MsG0580026488.01.T01:intron 45.0%
TTTCAAAGCATGGCTCTCTC+CGG - Chr5:38340243-38340262 MsG0580026488.01.T01:three_prime_UTR 45.0%
TTTCAAGAAGAGACCCCAAG+AGG + Chr5:38342211-38342230 None:intergenic 45.0%
! AAAACTGTAGGTTGAGGCAC+CGG - Chr5:38342228-38342247 MsG0580026488.01.T01:intron 45.0%
! ACCATTCTTGCCGGTATTGA+TGG + Chr5:38344514-38344533 None:intergenic 45.0%
! ACTGCATGGCTTGGAACAAT+AGG + Chr5:38344130-38344149 None:intergenic 45.0%
! ATTTTCTTGGTCACGTCACG+TGG - Chr5:38340917-38340936 MsG0580026488.01.T01:intron 45.0%
! CAGTCCACTGTCTTGTTGTA+AGG + Chr5:38340528-38340547 None:intergenic 45.0%
! GGAACTTTGGGAAGTCTTGT+TGG - Chr5:38341736-38341755 MsG0580026488.01.T01:intron 45.0%
! TATGTCTGAGGTAACGTCTC+TGG - Chr5:38341872-38341891 MsG0580026488.01.T01:intron 45.0%
! TCCACTGTCTTGTTGTAAGG+AGG + Chr5:38340525-38340544 None:intergenic 45.0%
! TCTCAGATGCGTTGACAACA+CGG + Chr5:38344228-38344247 None:intergenic 45.0%
!! ACTTCTCTGCATTTTCTGGC+TGG + Chr5:38343094-38343113 None:intergenic 45.0%
!! AGAATAGGGATTGGTTTCGG+AGG + Chr5:38342645-38342664 None:intergenic 45.0%
!! CCATTCTTGCCGGTATTGAT+GGG + Chr5:38344513-38344532 None:intergenic 45.0%
!! CTGCTTGAATTGGGTACTGA+TGG - Chr5:38344277-38344296 MsG0580026488.01.T01:intron 45.0%
!! CTTTCTAACCTTAGCGGGTT+TGG - Chr5:38341441-38341460 MsG0580026488.01.T01:intron 45.0%
!! GGAAACCAGAAATGGATTGG+TGG - Chr5:38342394-38342413 MsG0580026488.01.T01:intron 45.0%
!! GGTGTGGTTTTTGGACAAAC+TGG - Chr5:38344555-38344574 MsG0580026488.01.T01:CDS 45.0%
!! TACTCTCGAGACTGATTTGG+AGG - Chr5:38340711-38340730 MsG0580026488.01.T01:CDS 45.0%
!! TCATTGAGTGCTGGGTGATT+AGG + Chr5:38344322-38344341 None:intergenic 45.0%
!!! GGTTCAATTTTGGGACTCGA+CGG + Chr5:38342715-38342734 None:intergenic 45.0%
!!! TGGGAAGTTGGTGTGGTTTT+TGG - Chr5:38344546-38344565 MsG0580026488.01.T01:CDS 45.0%
!! TATATTTATTTAACATTTAT+TGG + Chr5:38342957-38342976 None:intergenic 5.0%
ATCTACCAGACGGTCTTCCA+TGG + Chr5:38341492-38341511 None:intergenic 50.0%
CACACCAACTTCCCATTAGC+TGG + Chr5:38344541-38344560 None:intergenic 50.0%
CCAACCAGCTAATGGGAAGT+TGG - Chr5:38344534-38344553 MsG0580026488.01.T01:CDS 50.0%
CCAACTTCCCATTAGCTGGT+TGG + Chr5:38344537-38344556 None:intergenic 50.0%
CCCATCAATACCGGCAAGAA+TGG - Chr5:38344510-38344529 MsG0580026488.01.T01:intron 50.0%
GAGAACCACCAGATATAGCG+AGG + Chr5:38340389-38340408 None:intergenic 50.0%
GCTTCCACATATGGGGACAA+TGG + Chr5:38342317-38342336 None:intergenic 50.0%
GTTGCACTATCCTAGTCTCC+TGG + Chr5:38341468-38341487 None:intergenic 50.0%
TGAGTGGTTCTTCTCTCAGC+AGG + Chr5:38342611-38342630 None:intergenic 50.0%
TGGTGCTCTTCTGACCTAGT+TGG - Chr5:38341567-38341586 MsG0580026488.01.T01:intron 50.0%
TGTGACAAGCATGTCAGCGA+AGG + Chr5:38344097-38344116 None:intergenic 50.0%
TTCTGCATCCAATGTAGCGG+TGG - Chr5:38344423-38344442 MsG0580026488.01.T01:intron 50.0%
TTTGCCCTCGCTATATCTGG+TGG - Chr5:38340381-38340400 MsG0580026488.01.T01:CDS 50.0%
! ATTCTCTCAGGTGGGGGTAT+AGG + Chr5:38344379-38344398 None:intergenic 50.0%
! CTCAGATGCGTTGACAACAC+GGG + Chr5:38344227-38344246 None:intergenic 50.0%
! GAAGAGACCCCAAGAGGTAT+AGG + Chr5:38342205-38342224 None:intergenic 50.0%
! TGCCAAGTCTTTTGGCCACT+CGG + Chr5:38343142-38343161 None:intergenic 50.0%
! TTCTCTCAGGTGGGGGTATA+GGG + Chr5:38344378-38344397 None:intergenic 50.0%
!! AGAAATGGATTGGTGGGACC+CGG - Chr5:38342401-38342420 MsG0580026488.01.T01:intron 50.0%
!! CAGCTAATGGGAAGTTGGTG+TGG - Chr5:38344539-38344558 MsG0580026488.01.T01:CDS 50.0%
!! GTCGGAGTCTTCGAGTTTTG+TGG + Chr5:38344584-38344603 None:intergenic 50.0%
!! TTGTGAAGTGCTGCCTACCA+TGG - Chr5:38341513-38341532 MsG0580026488.01.T01:intron 50.0%
AATGTCGGACGAAGCTGTGC+AGG - Chr5:38340347-38340366 MsG0580026488.01.T01:CDS 55.0%
AGCGTCACAGACTAGCAGTG+AGG - Chr5:38341715-38341734 MsG0580026488.01.T01:intron 55.0%
AGCTGCTTCTTCCGCTGACA+CGG + Chr5:38344167-38344186 None:intergenic 55.0%
CAACACCATGGAAGACCGTC+TGG - Chr5:38341484-38341503 MsG0580026488.01.T01:intron 55.0%
CAACTGTCAAGCTGATGCGC+TGG + Chr5:38341639-38341658 None:intergenic 55.0%
CACGGGTTCTCACCAACTGT+CGG + Chr5:38344210-38344229 None:intergenic 55.0%
GACCGAGTGGCCAAAAGACT+TGG - Chr5:38343137-38343156 MsG0580026488.01.T01:intron 55.0%
GACGAAGCTGTGCAGGATCA+TGG - Chr5:38340354-38340373 MsG0580026488.01.T01:CDS 55.0%
GCTGGTTGGACCATTCTTGC+CGG + Chr5:38344523-38344542 None:intergenic 55.0%
GGGTCCCACCAATCCATTTC+TGG + Chr5:38342402-38342421 None:intergenic 55.0%
TTGGTTTCGGAGGTTGTGGC+TGG + Chr5:38342635-38342654 None:intergenic 55.0%
! TCTCTCAGGTGGGGGTATAG+GGG + Chr5:38344377-38344396 None:intergenic 55.0%
!! AACCTTAGCGGGTTTGGTCC+AGG - Chr5:38341447-38341466 MsG0580026488.01.T01:intron 55.0%
!! ACCTATGGTGCTGCCATGGT+AGG + Chr5:38341529-38341548 None:intergenic 55.0%
!! AGACAGTGGACTGGACCAAG+TGG - Chr5:38340535-38340554 MsG0580026488.01.T01:CDS 55.0%
!! GCCGGTATTGATGGGCAATC+AGG + Chr5:38344505-38344524 None:intergenic 55.0%
!! GGGATTGGTTTCGGAGGTTG+TGG + Chr5:38342639-38342658 None:intergenic 55.0%
AATCGGGTCCTAGCCTCTCC+AGG + Chr5:38341281-38341300 None:intergenic 60.0%
AATGTAGCGGTGGTCGCAGC+AGG - Chr5:38344433-38344452 MsG0580026488.01.T01:intron 60.0%
CAAAGTGGGATGACCACGCC+TGG - Chr5:38341260-38341279 MsG0580026488.01.T01:intron 60.0%
CTCCTGGACCAAACCCGCTA+AGG + Chr5:38341452-38341471 None:intergenic 60.0%
GCCTACCATGGCAGCACCAT+AGG - Chr5:38341525-38341544 MsG0580026488.01.T01:intron 60.0%
GGAGGTTGTGGCTGGATGAG+TGG + Chr5:38342627-38342646 None:intergenic 60.0%
TGCTGCGACCACCGCTACAT+TGG + Chr5:38344434-38344453 None:intergenic 60.0%
! CGGGTTTGGTCCAGGAGACT+AGG - Chr5:38341455-38341474 MsG0580026488.01.T01:intron 60.0%
!! TGCGACCTATGGTGCTGCCA+TGG + Chr5:38341533-38341552 None:intergenic 60.0%
TGACCACGCCTGGAGAGGCT+AGG - Chr5:38341270-38341289 MsG0580026488.01.T01:intron 65.0%
TGGGATGACCACGCCTGGAG+AGG - Chr5:38341265-38341284 MsG0580026488.01.T01:intron 65.0%
GGTCCTAGCCTCTCCAGGCG+TGG + Chr5:38341276-38341295 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 38340065 38344880 38340065 ID=MsG0580026488.01;Name=MsG0580026488.01
Chr5 mRNA 38340065 38344880 38340065 ID=MsG0580026488.01.T01;Parent=MsG0580026488.01;Name=MsG0580026488.01.T01;_AED=0.41;_eAED=0.43;_QI=0|0.66|0.75|1|1|1|4|265|287
Chr5 exon 38340065 38340821 38340065 ID=MsG0580026488.01.T01:exon:24450;Parent=MsG0580026488.01.T01
Chr5 exon 38344301 38344436 38344301 ID=MsG0580026488.01.T01:exon:24449;Parent=MsG0580026488.01.T01
Chr5 exon 38344521 38344715 38344521 ID=MsG0580026488.01.T01:exon:24448;Parent=MsG0580026488.01.T01
Chr5 exon 38344840 38344880 38344840 ID=MsG0580026488.01.T01:exon:24447;Parent=MsG0580026488.01.T01
Chr5 CDS 38344840 38344880 38344840 ID=MsG0580026488.01.T01:cds;Parent=MsG0580026488.01.T01
Chr5 CDS 38344521 38344715 38344521 ID=MsG0580026488.01.T01:cds;Parent=MsG0580026488.01.T01
Chr5 CDS 38344301 38344436 38344301 ID=MsG0580026488.01.T01:cds;Parent=MsG0580026488.01.T01
Chr5 CDS 38340330 38340821 38340330 ID=MsG0580026488.01.T01:cds;Parent=MsG0580026488.01.T01
Chr5 three_prime_UTR 38340065 38340329 38340065 ID=MsG0580026488.01.T01:three_prime_utr;Parent=MsG0580026488.01.T01
Gene Sequence

>MsG0580026488.01.T01

ATGTTATGTCCTGTTTCCGTATCTATTTCTGTGCTTCATAGAGCTATTGAAGTTTTTCAAAGCATGGCTCTCTCCGGTGATCATAAAAACAGAGGAGAGTTGAGGATTTTTGACAGTGTAGATGAGGTGAAAACTGTTTTGGCTGAGTACATTAATCAAATGTCGGACGAAGCTGTGCAGGATCATGGATTCTTTGCCCTCGCTATATCTGGTGGTTCTCTCATTGATTTAATGGGAAAACTCTTGCAACCTCCTTACAACAAGACAGTGGACTGGACCAAGTGGTATATCTTCTGGGCTGACGAGCGTGTTGTCTCGAAAAATCATGAGGATAGCAGTTTTAAGCATGCTAAAGAAGTCTTTTTGTCTAAGGTGCCTATTGTTCCAAGCCATGCAGTTTCTATTAACGATTCCGTGTCAGCGGAAGAAGCAGCTGATGATTATGAGTTTGTCATCCGACAGTTGGTGAGAACCCGTGTTGTCAACGCATCTGAGATTAGTGACTGCCCAAAATTTGATCTCATTCTGCTTGAATTGGGTACTGATGGTCATGTTGCCTCTTTATTTCCTAATCACCCAGCACTCAATGAAAGAGAAGAATGGGTAACTTTCATCACTGACTCCCCTATACCCCCACCTGAGAGAATCACATTCACCTTGCCTGTTATCAATTCTGCATCCAATGTAGCGGTGGTCGCAGCAGGTGAAAGTAAAGCAGATGCTGTACTGTTGGCAGTAGATGAGATTGGACCTGATTGCCCATCAATACCGGCAAGAATGGTCCAACCAGCTAATGGGAAGTTGGTGTGGTTTTTGGACAAACTGGCTGCCACAAAACTCGAAGACTCCGACTTGAACAATTAG
Protein sequence

>MsG0580026488.01.T01

MLCPVSVSISVLHRAIEVFQSMALSGDHKNRGELRIFDSVDEVKTVLAEYINQMSDEAVQDHGFFALAISGGSLIDLMGKLLQPPYNKTVDWTKWYIFWADERVVSKNHEDSSFKHAKEVFLSKVPIVPSHAVSINDSVSAEEAADDYEFVIRQLVRTRVVNASEISDCPKFDLILLELGTDGHVASLFPNHPALNEREEWVTFITDSPIPPPERITFTLPVINSASNVAVVAAGESKADAVLLAVDEIGPDCPSIPARMVQPANGKLVWFLDKLAATKLEDSDLNN*