AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031597.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031597.01.T01 MTR_6g027300 85.593 236 17 2 27 245 391 626 1.06e-136 398
MsG0680031597.01.T01 MTR_6g027300 85.593 236 17 2 27 245 455 690 2.84e-136 399
MsG0680031597.01.T01 MTR_6g027300 85.593 236 17 2 27 245 455 690 4.23e-136 399
MsG0680031597.01.T01 MTR_6g027300 85.593 236 17 2 27 245 480 715 1.51e-135 398
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031597.01.T01 AT1G08680 35.533 197 79 9 82 245 470 651 6.19e-20 89.0
MsG0680031597.01.T01 AT1G08680 36.413 184 93 7 82 245 428 607 8.87e-20 88.6
MsG0680031597.01.T01 AT1G08680 36.413 184 93 7 82 245 470 649 9.47e-20 88.2
MsG0680031597.01.T01 AT1G08680 36.413 184 93 7 82 245 469 648 9.65e-20 88.2

Find 86 sgRNAs with CRISPR-Local

Find 412 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTGGAAATTTCCATTTA+AGG 0.137427 6:-22910446 None:intergenic
TTTCCATTTAAGGTTGAAAA+TGG 0.190981 6:-22910436 None:intergenic
GCTACATATAACTTTCTATT+TGG 0.198278 6:-22913239 None:intergenic
CCTTCTGCAGATGAAATATA+TGG 0.230130 6:-22912046 None:intergenic
TGGAATGCATTTGAAGATTC+TGG 0.241742 6:+22910799 MsG0680031597.01.T01:CDS
TTCAAGTGCTGAATCTTTAC+AGG 0.276912 6:+22910402 MsG0680031597.01.T01:CDS
CCGATAATAATTTGACAAAA+TGG 0.318006 6:-22913361 None:intergenic
TGTAGGTGGTTTCTCATTCA+TGG 0.325806 6:+22912200 MsG0680031597.01.T01:intron
GATGAGTCACTTACATTTGA+TGG 0.331765 6:-22911057 None:intergenic
GCATTTCAAAAGATGGCATT+TGG 0.350725 6:-22910462 None:intergenic
AATTTCTCATCAGAAAGTTT+TGG 0.351007 6:+22910868 MsG0680031597.01.T01:CDS
ATCCAAGGCGTTGCTCCTAT+TGG 0.359017 6:+22911012 MsG0680031597.01.T01:CDS
CAGGGAGATATTCAACCTAA+TGG 0.362271 6:+22911159 MsG0680031597.01.T01:intron
CAGGAACCAGTTGCGTCGTT+TGG 0.392186 6:+22913168 MsG0680031597.01.T01:CDS
CACCAAATGTTGCTGGCAAA+AGG 0.397208 6:-22911985 None:intergenic
TGATTATCAAATGTTCCAAT+AGG 0.404427 6:-22911027 None:intergenic
GATTTACGATTGATTCCATT+AGG 0.405271 6:-22911174 None:intergenic
CAGGAATTATTCTATGCAAA+TGG 0.406258 6:-22913198 None:intergenic
CCTTGGATTCCAGCTTTAAC+CGG 0.408291 6:-22910997 None:intergenic
TAACTCATTACTTCCATTTG+AGG 0.415853 6:+22913478 MsG0680031597.01.T01:three_prime_UTR
AAACAATAAGTATCGGAAAC+CGG 0.437411 6:-22913301 None:intergenic
CTTCTGCAGATGAAATATAT+GGG 0.438642 6:-22912045 None:intergenic
ATTGCAATGCCTTCCTCAAA+TGG 0.439853 6:-22913491 None:intergenic
ACGCAACTGGTTCCTGTGCT+TGG 0.443097 6:-22913161 None:intergenic
CTTCATCTGTAATCTATGTA+TGG 0.447588 6:+22910500 MsG0680031597.01.T01:CDS
GGGATACCACCAAATGTTGC+TGG 0.451911 6:-22911992 None:intergenic
GTTGCTGGCAAAAGGGCATC+TGG 0.454327 6:-22911977 None:intergenic
TGATGTAGAACAGAACAATA+TGG 0.456189 6:+22911227 MsG0680031597.01.T01:CDS
TTTCCGCCAAACGACGCAAC+TGG 0.458307 6:-22913174 None:intergenic
TTCCAATAGGAGCAACGCCT+TGG 0.464810 6:-22911014 None:intergenic
TGTAAAGATTCAGCACTTGA+AGG 0.464813 6:-22910400 None:intergenic
GCACAAATACTCCTCGGATA+AGG 0.472119 6:+22913272 MsG0680031597.01.T01:three_prime_UTR
CGTGTCTGAGTATGCTTCAT+AGG 0.472301 6:+22913397 MsG0680031597.01.T01:three_prime_UTR
AACCAGGCACCGGTTAAAGC+TGG 0.472592 6:+22910988 MsG0680031597.01.T01:intron
TCCTCGGATAAGGCGTGTCC+CGG 0.473463 6:+22913282 MsG0680031597.01.T01:three_prime_UTR
ACCAAATGTTGCTGGCAAAA+GGG 0.473493 6:-22911984 None:intergenic
GAATCAAAGGGAAAATCAAA+TGG 0.479462 6:-22911204 None:intergenic
GTGCTGAATCTTTACAGGAT+AGG 0.481780 6:+22910407 MsG0680031597.01.T01:CDS
TTTGAGGGAGCCAAGGTTCA+GGG 0.483770 6:-22912012 None:intergenic
GAGTATTTGTGCTTCATAGT+TGG 0.483772 6:-22913261 None:intergenic
TCAGATAAAGTCCGTTATGA+AGG 0.484195 6:+22908121 MsG0680031597.01.T01:CDS
TCATTGCCTGAAAATATAGT+AGG 0.487732 6:-22913521 None:intergenic
GATTCAGCACTTGAAGGTAC+TGG 0.499953 6:-22910394 None:intergenic
CCTTGATTATTGCCATCCAC+TGG 0.501149 6:-22910832 None:intergenic
GCACTTGAAGGTACTGGTGC+AGG 0.501324 6:-22910388 None:intergenic
GAACCAGTTGCGTCGTTTGG+CGG 0.515973 6:+22913171 MsG0680031597.01.T01:CDS
CCAGTGGATGGCAATAATCA+AGG 0.516413 6:+22910832 MsG0680031597.01.T01:CDS
GGCACTCATCTTCCAGTGGA+TGG 0.518666 6:+22910820 MsG0680031597.01.T01:CDS
CTGTTCTACATCAGAATCAA+AGG 0.522211 6:-22911217 None:intergenic
TGGGCTCTGACAAGGAAGCC+TGG 0.526007 6:+22908097 MsG0680031597.01.T01:CDS
ATGAGTCACTTACATTTGAT+GGG 0.532895 6:-22911056 None:intergenic
AACAATAAGTATCGGAAACC+GGG 0.545940 6:-22913300 None:intergenic
GAATCTTCAAATGCATTCCA+TGG 0.547767 6:-22910796 None:intergenic
ACTTACTGTAATTGAGAAGT+TGG 0.548403 6:-22912234 None:intergenic
ACACTAGGCATTTCAAAAGA+TGG 0.549677 6:-22910469 None:intergenic
CCGGTTAAAGCTGGAATCCA+AGG 0.552295 6:+22910997 MsG0680031597.01.T01:CDS
CTTCCTTGTCAGAGCCCATG+TGG 0.552738 6:-22908092 None:intergenic
CATACATAGATTACAGATGA+AGG 0.554458 6:-22910499 None:intergenic
TTGGTGGTATCCCTGAACCT+TGG 0.556309 6:+22912002 MsG0680031597.01.T01:CDS
CTTCAGTATCTAACACTGGC+TGG 0.560576 6:-22913423 None:intergenic
GAAACAATAGTACAATGTAC+AGG 0.564285 6:-22913217 None:intergenic
GTGTCGGAAACAATAAGTAT+CGG 0.565734 6:-22913308 None:intergenic
TCATTACTTCCATTTGAGGA+AGG 0.567835 6:+22913482 MsG0680031597.01.T01:three_prime_UTR
TGTTCTACATCAGAATCAAA+GGG 0.567851 6:-22911216 None:intergenic
AAGTCCGTTATGAAGGGAGA+TGG 0.572726 6:+22908128 MsG0680031597.01.T01:CDS
TAACGGACTTTATCTGAACC+AGG 0.574889 6:-22908115 None:intergenic
CATATCATCTACTACACAAG+TGG 0.576434 6:+22910360 MsG0680031597.01.T01:CDS
CTTGCAAAGAGTTCATATCA+AGG 0.585065 6:-22911946 None:intergenic
TCGACGCTATGGAACCCACA+TGG 0.588041 6:+22908077 None:intergenic
CAGATAAAGTCCGTTATGAA+GGG 0.597744 6:+22908122 MsG0680031597.01.T01:CDS
GATGAAGGTACACCGACACT+AGG 0.601487 6:-22910484 None:intergenic
TATGAAGCACAAATACTCCT+CGG 0.606461 6:+22913266 MsG0680031597.01.T01:three_prime_UTR
TTCCTTGTCAGAGCCCATGT+GGG 0.610442 6:-22908091 None:intergenic
TTCTGGCACTCATCTTCCAG+TGG 0.611420 6:+22910816 MsG0680031597.01.T01:CDS
CTAGCCATCTCCCTTCATAA+CGG 0.611646 6:-22908132 None:intergenic
TGACAGGAACATCCAAGCAC+AGG 0.614379 6:+22913149 MsG0680031597.01.T01:intron
AACCCACATGGGCTCTGACA+AGG 0.615179 6:+22908089 MsG0680031597.01.T01:CDS
GTAATCTATGTATGGCATGA+TGG 0.615935 6:+22910508 MsG0680031597.01.T01:CDS
ACTTCTTCAGTATCTAACAC+TGG 0.617621 6:-22913427 None:intergenic
CCATATATTTCATCTGCAGA+AGG 0.621998 6:+22912046 MsG0680031597.01.T01:CDS
TTGAGAAGTTGGTGTGTGCA+CGG 0.626161 6:-22912223 None:intergenic
ATCATGTGTTAGTGTTGTGT+CGG 0.632003 6:-22913324 None:intergenic
CGACGCTATGGAACCCACAT+GGG 0.632529 6:+22908078 None:intergenic
ACCGGGACACGCCTTATCCG+AGG 0.640751 6:-22913283 None:intergenic
CTATGAAGCATACTCAGACA+CGG 0.644542 6:-22913396 None:intergenic
TTCTGCAGATGAAATATATG+GGG 0.650216 6:-22912044 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACAAAAATATTTTTTAGAA+GGG - Chr6:22912567-22912586 None:intergenic 10.0%
!!! CTTTTTTTCTTATAAAAAAA+GGG + Chr6:22909065-22909084 MsG0680031597.01.T01:intron 10.0%
!!! TAACAAAAATATTTTTTAGA+AGG - Chr6:22912568-22912587 None:intergenic 10.0%
!!! TCTTTTTTTCTTATAAAAAA+AGG + Chr6:22909064-22909083 MsG0680031597.01.T01:intron 10.0%
!!! TTTTTTTATAAGAAAAAAAG+AGG - Chr6:22909065-22909084 None:intergenic 10.0%
!! AAAAATTTAAAAGCAAAAAG+TGG + Chr6:22912930-22912949 MsG0680031597.01.T01:intron 15.0%
!! AAACACAAATATATTAAAAG+AGG - Chr6:22912865-22912884 None:intergenic 15.0%
!!! ATTTTTCAAAGATTATTTGT+AGG + Chr6:22912492-22912511 MsG0680031597.01.T01:intron 15.0%
!!! GTTTTTCTTTTATTTAATGT+GGG + Chr6:22911119-22911138 MsG0680031597.01.T01:intron 15.0%
!!! TCTTTTAATATATTTGTGTT+TGG + Chr6:22912864-22912883 MsG0680031597.01.T01:intron 15.0%
!!! TGGAAGATATTTTTAAAAAA+CGG + Chr6:22909563-22909582 MsG0680031597.01.T01:intron 15.0%
!!! TGTTTTTCTTTTATTTAATG+TGG + Chr6:22911118-22911137 MsG0680031597.01.T01:intron 15.0%
!!! TTTTTCAAAGATTATTTGTA+GGG + Chr6:22912493-22912512 MsG0680031597.01.T01:intron 15.0%
!!! TTTTTTAAAATTGACCATAT+TGG + Chr6:22908687-22908706 MsG0680031597.01.T01:intron 15.0%
!! AAAATCAAATACTCTTCATA+TGG + Chr6:22912709-22912728 MsG0680031597.01.T01:intron 20.0%
!! AAATAAGAGTAGAATTACAT+TGG - Chr6:22912169-22912188 None:intergenic 20.0%
!! AATAAGAGTAGAATTACATT+GGG - Chr6:22912168-22912187 None:intergenic 20.0%
!! AGCATATATCTTTATAAAAC+AGG - Chr6:22908478-22908497 None:intergenic 20.0%
!! ATAAATATTACATATTACCC+GGG - Chr6:22912656-22912675 None:intergenic 20.0%
!! ATATATCTTTATAAAACAGG+GGG - Chr6:22908475-22908494 None:intergenic 20.0%
!! CATATATCTTTATAAAACAG+GGG - Chr6:22908476-22908495 None:intergenic 20.0%
!! GATAAATATTACATATTACC+CGG - Chr6:22912657-22912676 None:intergenic 20.0%
!! GCATATATCTTTATAAAACA+GGG - Chr6:22908477-22908496 None:intergenic 20.0%
!! GTTCTTATTAAATAAAAACC+AGG + Chr6:22910972-22910991 MsG0680031597.01.T01:intron 20.0%
!! TGACCAAAAATATATTTAAC+CGG - Chr6:22912519-22912538 None:intergenic 20.0%
!! TTTAATCTTAATCCTAAATG+TGG - Chr6:22908744-22908763 None:intergenic 20.0%
!!! ACATTTTATATCTTTTCTGA+CGG - Chr6:22911858-22911877 None:intergenic 20.0%
!!! AGTAAATTTTTGTTACAGAA+AGG + Chr6:22909221-22909240 MsG0680031597.01.T01:intron 20.0%
!!! ATCAACTTTAAAAAACACTA+TGG + Chr6:22910727-22910746 MsG0680031597.01.T01:intron 20.0%
!!! CCATTTTGTCAAATTATTAT+CGG + Chr6:22913361-22913380 MsG0680031597.01.T01:three_prime_UTR 20.0%
!!! GAAATTTAAGATACATGTTT+TGG - Chr6:22912970-22912989 None:intergenic 20.0%
!!! GTAAATTTTTGTTACAGAAA+GGG + Chr6:22909222-22909241 MsG0680031597.01.T01:intron 20.0%
!!! GTATTTTGTTTGATATTTCA+GGG + Chr6:22911141-22911160 MsG0680031597.01.T01:intron 20.0%
!!! GTTAAATATATTTTTGGTCA+TGG + Chr6:22912519-22912538 MsG0680031597.01.T01:intron 20.0%
!!! TACTCTATATGATCAAATTT+TGG + Chr6:22910943-22910962 MsG0680031597.01.T01:intron 20.0%
!!! TAGATTTACATAAACTTTTC+AGG + Chr6:22911584-22911603 MsG0680031597.01.T01:intron 20.0%
!!! TCAACTTTAAAAAACACTAT+GGG + Chr6:22910728-22910747 MsG0680031597.01.T01:intron 20.0%
!!! TTATTTTGATTCTTCTATGT+AGG + Chr6:22912183-22912202 MsG0680031597.01.T01:intron 20.0%
!!! TTTTATAAGAAAAAAAGAGG+AGG - Chr6:22909062-22909081 None:intergenic 20.0%
! AAAAGCTTATAATGGTCAAT+AGG - Chr6:22911754-22911773 None:intergenic 25.0%
! AAACATCTTGTGTAAAAAAC+AGG - Chr6:22909171-22909190 None:intergenic 25.0%
! AACATCTTGTGTAAAAAACA+GGG - Chr6:22909170-22909189 None:intergenic 25.0%
! AAGAAAAACAAAATCAACCT+TGG - Chr6:22911108-22911127 None:intergenic 25.0%
! AATTACGATCTAGTATAATG+AGG - Chr6:22911342-22911361 None:intergenic 25.0%
! ACATGTAAAATTTGAACGAT+TGG - Chr6:22909695-22909714 None:intergenic 25.0%
! ATATAGAGTATAGACTATCA+TGG - Chr6:22910933-22910952 None:intergenic 25.0%
! ATGTGAATCTAATCTATACA+CGG - Chr6:22911264-22911283 None:intergenic 25.0%
! ATTACGATCTAGTATAATGA+GGG - Chr6:22911341-22911360 None:intergenic 25.0%
! ATTGAGCTGTTTATCTAAAT+AGG + Chr6:22911696-22911715 MsG0680031597.01.T01:intron 25.0%
! CAAAAATCAAAAGTAAACAG+TGG - Chr6:22912606-22912625 None:intergenic 25.0%
! CATTTGGAAATTTCCATTTA+AGG - Chr6:22910449-22910468 None:intergenic 25.0%
! CCATTAAACTCATATAATTG+AGG + Chr6:22909655-22909674 MsG0680031597.01.T01:intron 25.0%
! CCGATAATAATTTGACAAAA+TGG - Chr6:22913364-22913383 None:intergenic 25.0%
! CCTCAATTATATGAGTTTAA+TGG - Chr6:22909658-22909677 None:intergenic 25.0%
! CTGAATAATGTAATGTTTGA+TGG + Chr6:22913017-22913036 MsG0680031597.01.T01:intron 25.0%
! CTGCATAGAATTGAATATAT+TGG - Chr6:22913106-22913125 None:intergenic 25.0%
! GAATACATCGAAATTTCAAT+AGG + Chr6:22910750-22910769 MsG0680031597.01.T01:intron 25.0%
! GCTACATATAACTTTCTATT+TGG - Chr6:22913242-22913261 None:intergenic 25.0%
! GTGATGTTATATCAATTTGT+AGG + Chr6:22908559-22908578 MsG0680031597.01.T01:intron 25.0%
! TAACGGTAATAATCTAGATT+TGG + Chr6:22909252-22909271 MsG0680031597.01.T01:intron 25.0%
! TATATCTTTATAAAACAGGG+GGG - Chr6:22908474-22908493 None:intergenic 25.0%
! TATGCTATCTGCATAATAAA+TGG + Chr6:22910680-22910699 MsG0680031597.01.T01:intron 25.0%
! TCAGAAATTAGGTCAATTAT+TGG + Chr6:22910585-22910604 MsG0680031597.01.T01:intron 25.0%
! TGATATAACATCACTTAATG+TGG - Chr6:22908553-22908572 None:intergenic 25.0%
! TGATTATCAAATGTTCCAAT+AGG - Chr6:22911030-22911049 None:intergenic 25.0%
! TTAAAAAACGGTTACAAAGT+GGG + Chr6:22909575-22909594 MsG0680031597.01.T01:intron 25.0%
! TTACAGTTTACTCAGTATAA+GGG + Chr6:22909297-22909316 MsG0680031597.01.T01:intron 25.0%
! TTGAGCTGTTTATCTAAATA+GGG + Chr6:22911697-22911716 MsG0680031597.01.T01:intron 25.0%
! TTTAAAAAACGGTTACAAAG+TGG + Chr6:22909574-22909593 MsG0680031597.01.T01:intron 25.0%
! TTTACAGTTTACTCAGTATA+AGG + Chr6:22909296-22909315 MsG0680031597.01.T01:intron 25.0%
!! AACAGACATTTTAGATATGA+TGG - Chr6:22911911-22911930 None:intergenic 25.0%
!! AATAATCTAGATTTGGAACA+AGG + Chr6:22909259-22909278 MsG0680031597.01.T01:intron 25.0%
!! AATTTCTCATCAGAAAGTTT+TGG + Chr6:22910868-22910887 MsG0680031597.01.T01:CDS 25.0%
!! ACAGACATTTTAGATATGAT+GGG - Chr6:22911910-22911929 None:intergenic 25.0%
!! ATAATCTAGATTTGGAACAA+GGG + Chr6:22909260-22909279 MsG0680031597.01.T01:intron 25.0%
!! GAATTTCAAGTATAAGATGT+AGG - Chr6:22909880-22909899 None:intergenic 25.0%
!! TTACATTAAACTAGTGCTTT+TGG + Chr6:22909820-22909839 MsG0680031597.01.T01:intron 25.0%
!! TTTCCATTTAAGGTTGAAAA+TGG - Chr6:22910439-22910458 None:intergenic 25.0%
!!! AATTGGAGTATTTTTATGGA+AGG + Chr6:22908717-22908736 MsG0680031597.01.T01:intron 25.0%
!!! AGGGGAAATATTGTTATTTA+GGG - Chr6:22909034-22909053 None:intergenic 25.0%
!!! AGTGTTTTTTAAAGTTGATG+TGG - Chr6:22910726-22910745 None:intergenic 25.0%
!!! ATCTGTTGATCTTTTTCAAA+CGG + Chr6:22910115-22910134 MsG0680031597.01.T01:intron 25.0%
!!! CCACATATTTGATTTTCATT+GGG - Chr6:22909546-22909565 None:intergenic 25.0%
!!! GGTATTTTGTTTGATATTTC+AGG + Chr6:22911140-22911159 MsG0680031597.01.T01:intron 25.0%
!!! TCCACATATTTGATTTTCAT+TGG - Chr6:22909547-22909566 None:intergenic 25.0%
AAAAAAGTGGTACATTAGCA+AGG + Chr6:22912896-22912915 MsG0680031597.01.T01:intron 30.0%
AAACCGTGCATTAATGAATA+CGG - Chr6:22909425-22909444 None:intergenic 30.0%
AAGACAGTATGTGGTATATT+AGG + Chr6:22912786-22912805 MsG0680031597.01.T01:intron 30.0%
AATATACCACATACTGTCTT+TGG - Chr6:22912786-22912805 None:intergenic 30.0%
AATTAGAACCACCATAAAGA+AGG - Chr6:22912310-22912329 None:intergenic 30.0%
ACCAGAATTGTAAGATCTTA+AGG - Chr6:22909962-22909981 None:intergenic 30.0%
ACCTTAAGATCTTACAATTC+TGG + Chr6:22909958-22909977 MsG0680031597.01.T01:intron 30.0%
ACTTACTGTAATTGAGAAGT+TGG - Chr6:22912237-22912256 None:intergenic 30.0%
ACTTTATACTTCGTCATTCT+AGG + Chr6:22911451-22911470 MsG0680031597.01.T01:intron 30.0%
AGCAAAAAGTGGTATATTTG+CGG + Chr6:22912941-22912960 MsG0680031597.01.T01:intron 30.0%
ATATTAGGCACATCTTGTTA+TGG + Chr6:22912801-22912820 MsG0680031597.01.T01:intron 30.0%
ATCATGTAACATCACATTCA+CGG - Chr6:22912412-22912431 None:intergenic 30.0%
ATGACGAAGTATAAAGTTAC+AGG - Chr6:22911448-22911467 None:intergenic 30.0%
ATGAGTCACTTACATTTGAT+GGG - Chr6:22911059-22911078 None:intergenic 30.0%
ATTAAATAAAAACCAGGCAC+CGG + Chr6:22910978-22910997 MsG0680031597.01.T01:intron 30.0%
ATTAGAACCACCATAAAGAA+GGG - Chr6:22912309-22912328 None:intergenic 30.0%
CAGGAATTATTCTATGCAAA+TGG - Chr6:22913201-22913220 None:intergenic 30.0%
CATACATAGATTACAGATGA+AGG - Chr6:22910502-22910521 None:intergenic 30.0%
CCCAATGAAAATCAAATATG+TGG + Chr6:22909543-22909562 MsG0680031597.01.T01:intron 30.0%
CCTTGTAAAACTAGTTCATA+TGG - Chr6:22912743-22912762 None:intergenic 30.0%
CTCAAGTAAGTTCAGAAATT+AGG + Chr6:22910574-22910593 MsG0680031597.01.T01:intron 30.0%
CTTCATCTGTAATCTATGTA+TGG + Chr6:22910500-22910519 MsG0680031597.01.T01:CDS 30.0%
CTTCTGCAGATGAAATATAT+GGG - Chr6:22912048-22912067 None:intergenic 30.0%
CTTTATACTTCGTCATTCTA+GGG + Chr6:22911452-22911471 MsG0680031597.01.T01:intron 30.0%
GAAACAATAGTACAATGTAC+AGG - Chr6:22913220-22913239 None:intergenic 30.0%
GAATCAAAGGGAAAATCAAA+TGG - Chr6:22911207-22911226 None:intergenic 30.0%
GGATAAAATGTCGAACATAA+TGG - Chr6:22908918-22908937 None:intergenic 30.0%
TAACTCATTACTTCCATTTG+AGG + Chr6:22913478-22913497 MsG0680031597.01.T01:three_prime_UTR 30.0%
TAGTATAATGAGGGCAATAA+GGG - Chr6:22911332-22911351 None:intergenic 30.0%
TATAACATCACTTAATGTGG+TGG - Chr6:22908550-22908569 None:intergenic 30.0%
TATTTATTCCCCCTTCTTTA+TGG + Chr6:22912296-22912315 MsG0680031597.01.T01:intron 30.0%
TCATTGCCTGAAAATATAGT+AGG - Chr6:22913524-22913543 None:intergenic 30.0%
TCCTAATGCTTTATCTTGAA+AGG - Chr6:22910026-22910045 None:intergenic 30.0%
TCTGTTTCAACTATCTGATA+AGG + Chr6:22910166-22910185 MsG0680031597.01.T01:intron 30.0%
TCTTCAAAATAGCCATTGAA+AGG + Chr6:22909348-22909367 MsG0680031597.01.T01:intron 30.0%
TGACGAAGTATAAAGTTACA+GGG - Chr6:22911447-22911466 None:intergenic 30.0%
TGATGTAGAACAGAACAATA+TGG + Chr6:22911227-22911246 MsG0680031597.01.T01:CDS 30.0%
TGTTCTACATCAGAATCAAA+GGG - Chr6:22911219-22911238 None:intergenic 30.0%
TTAAGATCTTACAATTCTGG+TGG + Chr6:22909961-22909980 MsG0680031597.01.T01:intron 30.0%
TTATCCATCCCTAAAATGAA+GGG + Chr6:22910311-22910330 MsG0680031597.01.T01:intron 30.0%
TTCTGCAGATGAAATATATG+GGG - Chr6:22912047-22912066 None:intergenic 30.0%
TTGAAAATCATTCAAAGTGC+AGG - Chr6:22909779-22909798 None:intergenic 30.0%
TTGGCTTCTTGAAAAAAAAG+TGG + Chr6:22912883-22912902 MsG0680031597.01.T01:intron 30.0%
! AAATCCATAGCATCTCATTT+TGG - Chr6:22908660-22908679 None:intergenic 30.0%
! AGCCTTTGAAAAGCTTATAA+TGG - Chr6:22911762-22911781 None:intergenic 30.0%
! ATGTTCGACATTTTATCCTA+TGG + Chr6:22908920-22908939 MsG0680031597.01.T01:intron 30.0%
! CAAAAAAGTACAATCCAAAC+AGG - Chr6:22911478-22911497 None:intergenic 30.0%
! CATAGTCCTACTATATTTTC+AGG + Chr6:22913515-22913534 MsG0680031597.01.T01:three_prime_UTR 30.0%
! GACCATTATAAGCTTTTCAA+AGG + Chr6:22911757-22911776 MsG0680031597.01.T01:intron 30.0%
! GATCCATTTTCAACCTTAAA+TGG + Chr6:22910433-22910452 MsG0680031597.01.T01:CDS 30.0%
! GATTTACGATTGATTCCATT+AGG - Chr6:22911177-22911196 None:intergenic 30.0%
! TAATTGAGTTGCATATTGAC+AGG + Chr6:22913133-22913152 MsG0680031597.01.T01:intron 30.0%
! TATTAGGCACATCTTGTTAT+GGG + Chr6:22912802-22912821 MsG0680031597.01.T01:intron 30.0%
! TCAATTTTCTCTCTTCCATA+AGG - Chr6:22909401-22909420 None:intergenic 30.0%
! TCCTTTCAAGATAAAGCATT+AGG + Chr6:22910022-22910041 MsG0680031597.01.T01:intron 30.0%
! TTTTATATCTTTTCTGACGG+CGG - Chr6:22911855-22911874 None:intergenic 30.0%
!! AAACAATAAGTATCGGAAAC+CGG - Chr6:22913304-22913323 None:intergenic 30.0%
!! AAATATTGTTATTTAGGGGG+AGG - Chr6:22909029-22909048 None:intergenic 30.0%
!! ATGATAGAGATTTGCTAATG+AGG + Chr6:22908193-22908212 MsG0680031597.01.T01:intron 30.0%
!! ATTTGATTTTCATTGGGAGT+CGG - Chr6:22909540-22909559 None:intergenic 30.0%
!! GAGGGGAAATATTGTTATTT+AGG - Chr6:22909035-22909054 None:intergenic 30.0%
!! GCAGAATTGGAGTATTTTTA+TGG + Chr6:22908713-22908732 MsG0680031597.01.T01:intron 30.0%
!! GGGAAATATTGTTATTTAGG+GGG - Chr6:22909032-22909051 None:intergenic 30.0%
!! GGGGAAATATTGTTATTTAG+GGG - Chr6:22909033-22909052 None:intergenic 30.0%
!! TATTGGCTTTCATCAAAATC+TGG - Chr6:22913089-22913108 None:intergenic 30.0%
!! TCTAGCTTTGTAATCCAAAA+GGG + Chr6:22908964-22908983 MsG0680031597.01.T01:intron 30.0%
!! TTTTGATTCTTCTATGTAGG+TGG + Chr6:22912186-22912205 MsG0680031597.01.T01:intron 30.0%
!!! CCATATGAACTAGTTTTACA+AGG + Chr6:22912740-22912759 MsG0680031597.01.T01:intron 30.0%
!!! GCTAGTATTATTTTTAGTCC+TGG + Chr6:22908150-22908169 MsG0680031597.01.T01:intron 30.0%
!!! GGTTATATTTTTGAAGCAAG+TGG + Chr6:22909841-22909860 MsG0680031597.01.T01:intron 30.0%
AAACTTAGGAGATGAACATC+AGG - Chr6:22908274-22908293 None:intergenic 35.0%
AAGGACCAAAACAAAACACA+TGG + Chr6:22912759-22912778 MsG0680031597.01.T01:intron 35.0%
AATAACAATATTTCCCCTCC+TGG + Chr6:22909036-22909055 MsG0680031597.01.T01:intron 35.0%
ACACTAGGCATTTCAAAAGA+TGG - Chr6:22910472-22910491 None:intergenic 35.0%
ACAGAAAGGGAAGATAGTAA+CGG + Chr6:22909235-22909254 MsG0680031597.01.T01:intron 35.0%
ACCATTACTCTACTATCCAT+AGG - Chr6:22908939-22908958 None:intergenic 35.0%
ACCTTCAATTGTGTCATAAG+AGG - Chr6:22911391-22911410 None:intergenic 35.0%
ACTTCTTCAGTATCTAACAC+TGG - Chr6:22913430-22913449 None:intergenic 35.0%
AGAAATCAATAGATGCGACT+TGG - Chr6:22910235-22910254 None:intergenic 35.0%
AGACTGTCTGAAAAAGCTTA+TGG + Chr6:22911526-22911545 MsG0680031597.01.T01:intron 35.0%
AGTAAAACGATGCAATCACA+AGG - Chr6:22912359-22912378 None:intergenic 35.0%
AGTAGGATTGACACTGATAA+CGG - Chr6:22909478-22909497 None:intergenic 35.0%
AGTGTCAATCCTACTAAAAG+GGG + Chr6:22909483-22909502 MsG0680031597.01.T01:intron 35.0%
ATATCAGTCTATCAGAAGAG+TGG - Chr6:22908626-22908645 None:intergenic 35.0%
ATCATGTGTTAGTGTTGTGT+CGG - Chr6:22913327-22913346 None:intergenic 35.0%
ATCTAATCTATACACGGTCT+AGG - Chr6:22911258-22911277 None:intergenic 35.0%
ATGACACAATTGAAGGTTTC+TGG + Chr6:22911394-22911413 MsG0680031597.01.T01:intron 35.0%
ATTGCAATGATGTAGTTCTC+TGG - Chr6:22909918-22909937 None:intergenic 35.0%
CAAAAAGTGGTATATTTGCG+GGG + Chr6:22912943-22912962 MsG0680031597.01.T01:intron 35.0%
CAACATTCCTATCTCAACAT+TGG - Chr6:22912441-22912460 None:intergenic 35.0%
CAATGTTGAGATAGGAATGT+TGG + Chr6:22912439-22912458 MsG0680031597.01.T01:intron 35.0%
CAGATAAAGTCCGTTATGAA+GGG + Chr6:22908122-22908141 MsG0680031597.01.T01:CDS 35.0%
CAGTGTCAATCCTACTAAAA+GGG + Chr6:22909482-22909501 MsG0680031597.01.T01:intron 35.0%
CATATCATCTACTACACAAG+TGG + Chr6:22910360-22910379 MsG0680031597.01.T01:CDS 35.0%
CCATATATTTCATCTGCAGA+AGG + Chr6:22912046-22912065 MsG0680031597.01.T01:CDS 35.0%
CCTTCTGCAGATGAAATATA+TGG - Chr6:22912049-22912068 None:intergenic 35.0%
CTAGTATAATGAGGGCAATA+AGG - Chr6:22911333-22911352 None:intergenic 35.0%
CTGTTCTACATCAGAATCAA+AGG - Chr6:22911220-22911239 None:intergenic 35.0%
CTTATAAAAAAAGGGCAACC+CGG + Chr6:22909073-22909092 MsG0680031597.01.T01:intron 35.0%
CTTGCAAAGAGTTCATATCA+AGG - Chr6:22911949-22911968 None:intergenic 35.0%
CTTGTGTAAAAAACAGGGTA+AGG - Chr6:22909165-22909184 None:intergenic 35.0%
CTTTGTAATCCAAAAGGGTT+GGG + Chr6:22908969-22908988 MsG0680031597.01.T01:intron 35.0%
GAAATCAATAGATGCGACTT+GGG - Chr6:22910234-22910253 None:intergenic 35.0%
GAATAAATAGCAGGGAGTAA+GGG - Chr6:22912285-22912304 None:intergenic 35.0%
GAATCTTCAAATGCATTCCA+TGG - Chr6:22910799-22910818 None:intergenic 35.0%
GAGAAAACAAGTTCCTGTTA+TGG + Chr6:22910542-22910561 MsG0680031597.01.T01:intron 35.0%
GAGAATCAAACCTAAACCTT+GGG - Chr6:22908844-22908863 None:intergenic 35.0%
GAGTATTTGTGCTTCATAGT+TGG - Chr6:22913264-22913283 None:intergenic 35.0%
GATAAACTAGCACACGAAAT+TGG - Chr6:22908874-22908893 None:intergenic 35.0%
GATGAGTCACTTACATTTGA+TGG - Chr6:22911060-22911079 None:intergenic 35.0%
GCAAAAAGTGGTATATTTGC+GGG + Chr6:22912942-22912961 MsG0680031597.01.T01:intron 35.0%
GCATTTCAAAAGATGGCATT+TGG - Chr6:22910465-22910484 None:intergenic 35.0%
GTAATCTATGTATGGCATGA+TGG + Chr6:22910508-22910527 MsG0680031597.01.T01:CDS 35.0%
GTAGTAGATGATATGAACTG+AGG - Chr6:22910355-22910374 None:intergenic 35.0%
GTGTCGGAAACAATAAGTAT+CGG - Chr6:22913311-22913330 None:intergenic 35.0%
GTTATCCATCCCTAAAATGA+AGG + Chr6:22910310-22910329 MsG0680031597.01.T01:intron 35.0%
TATCATATGCATTTCAGCAC+TGG + Chr6:22911821-22911840 MsG0680031597.01.T01:intron 35.0%
TATGAAGCACAAATACTCCT+CGG + Chr6:22913266-22913285 MsG0680031597.01.T01:three_prime_UTR 35.0%
TCAAAGATTATTTGTAGGGC+CGG + Chr6:22912497-22912516 MsG0680031597.01.T01:intron 35.0%
TCAGATAAAGTCCGTTATGA+AGG + Chr6:22908121-22908140 MsG0680031597.01.T01:CDS 35.0%
TCAGTAATAGCAGAACCTTA+TGG + Chr6:22909383-22909402 MsG0680031597.01.T01:intron 35.0%
TCAGTGTCAATCCTACTAAA+AGG + Chr6:22909481-22909500 MsG0680031597.01.T01:intron 35.0%
TCATTACTTCCATTTGAGGA+AGG + Chr6:22913482-22913501 MsG0680031597.01.T01:three_prime_UTR 35.0%
TCCAATTCTGCAAACCAATA+TGG - Chr6:22908704-22908723 None:intergenic 35.0%
TCCTATGGATAGTAGAGTAA+TGG + Chr6:22908935-22908954 MsG0680031597.01.T01:intron 35.0%
TCCTCTTATGACACAATTGA+AGG + Chr6:22911387-22911406 MsG0680031597.01.T01:intron 35.0%
TGATGTTCATCTCCTAAGTT+TGG + Chr6:22908273-22908292 MsG0680031597.01.T01:intron 35.0%
TGGAATGCATTTGAAGATTC+TGG + Chr6:22910799-22910818 MsG0680031597.01.T01:CDS 35.0%
TGGACTGTTAAACCAAACTT+AGG - Chr6:22908288-22908307 None:intergenic 35.0%
TGTAAAGATTCAGCACTTGA+AGG - Chr6:22910403-22910422 None:intergenic 35.0%
TGTAAGATCTTAAGGTCGAA+AGG - Chr6:22909954-22909973 None:intergenic 35.0%
TTACAGATGTCACCTTTCAA+TGG - Chr6:22909363-22909382 None:intergenic 35.0%
TTAGAACCACCATAAAGAAG+GGG - Chr6:22912308-22912327 None:intergenic 35.0%
TTCCTATCTCAACATTGGTA+AGG - Chr6:22912436-22912455 None:intergenic 35.0%
TTCCTTACCAATGTTGAGAT+AGG + Chr6:22912431-22912450 MsG0680031597.01.T01:intron 35.0%
TTGCAATGATGTAGTTCTCT+GGG - Chr6:22909917-22909936 None:intergenic 35.0%
TTGGGTTTAAATCACCACAT+GGG + Chr6:22908987-22909006 MsG0680031597.01.T01:intron 35.0%
TTTATGGAAGGACCACATTT+AGG + Chr6:22908729-22908748 MsG0680031597.01.T01:intron 35.0%
! AGCTTCTGAGAAAAATCAAC+TGG - Chr6:22909988-22910007 None:intergenic 35.0%
! AGTCCTTATGTAGCTTGTAT+TGG + Chr6:22912679-22912698 MsG0680031597.01.T01:intron 35.0%
! ATTTTGTTACTGAACAGCCA+TGG + Chr6:22910779-22910798 MsG0680031597.01.T01:intron 35.0%
! CTTATGTAGCTTGTATTGGA+GGG + Chr6:22912683-22912702 MsG0680031597.01.T01:intron 35.0%
! GGGCCGGTTAAATATATTTT+TGG + Chr6:22912513-22912532 MsG0680031597.01.T01:intron 35.0%
! GTGATTGCATCGTTTTACTT+TGG + Chr6:22912360-22912379 MsG0680031597.01.T01:intron 35.0%
! TGATTTAAACCCAACCCTTT+TGG - Chr6:22908981-22909000 None:intergenic 35.0%
!! AACAATAAGTATCGGAAACC+GGG - Chr6:22913303-22913322 None:intergenic 35.0%
!! ACCATATTGGTTTGCAGAAT+TGG + Chr6:22908700-22908719 MsG0680031597.01.T01:intron 35.0%
!! CGCATCTATTGATTTCTTTG+CGG + Chr6:22910238-22910257 MsG0680031597.01.T01:intron 35.0%
!! GTCTAGCTTTGTAATCCAAA+AGG + Chr6:22908963-22908982 MsG0680031597.01.T01:intron 35.0%
!! TTCAAGTGCTGAATCTTTAC+AGG + Chr6:22910402-22910421 MsG0680031597.01.T01:CDS 35.0%
!!! TCTTTTGAAATGCCTAGTGT+CGG + Chr6:22910472-22910491 MsG0680031597.01.T01:CDS 35.0%
!!! TTGGTCCATGTGTTTTGTTT+TGG - Chr6:22912767-22912786 None:intergenic 35.0%
AACCTCAGATGCAAAATCAG+TGG + Chr6:22910286-22910305 MsG0680031597.01.T01:intron 40.0%
AACCTTGGAGAACAAATCAG+TGG - Chr6:22911093-22911112 None:intergenic 40.0%
AAGAAGGGGGAATAAATAGC+AGG - Chr6:22912294-22912313 None:intergenic 40.0%
AATCAAACCTAAACCTTGGG+AGG - Chr6:22908841-22908860 None:intergenic 40.0%
AATCACCACATGGGAATGTA+TGG + Chr6:22908996-22909015 MsG0680031597.01.T01:intron 40.0%
ACCAAATGTTGCTGGCAAAA+GGG - Chr6:22911987-22912006 None:intergenic 40.0%
ACCACCAAAATGAGATGCTA+TGG + Chr6:22908653-22908672 MsG0680031597.01.T01:intron 40.0%
ACTCATACTAAGCCAACTCT+TGG - Chr6:22909727-22909746 None:intergenic 40.0%
AGAAGGGGGAATAAATAGCA+GGG - Chr6:22912293-22912312 None:intergenic 40.0%
ATTGCAATGCCTTCCTCAAA+TGG - Chr6:22913494-22913513 None:intergenic 40.0%
ATTTCCCACTATGTGGCTAT+TGG + Chr6:22913044-22913063 MsG0680031597.01.T01:intron 40.0%
CACGGAAAAGTCAGAATTTC+TGG - Chr6:22908226-22908245 None:intergenic 40.0%
CAGGGAGATATTCAACCTAA+TGG + Chr6:22911159-22911178 MsG0680031597.01.T01:intron 40.0%
CCTCCAATACAAGCTACATA+AGG - Chr6:22912685-22912704 None:intergenic 40.0%
CGGTGTAAAACTAGATTGGA+CGG - Chr6:22909520-22909539 None:intergenic 40.0%
CTATGAAGCATACTCAGACA+CGG - Chr6:22913399-22913418 None:intergenic 40.0%
GAGCCGTATTCATTAATGCA+CGG + Chr6:22909419-22909438 MsG0680031597.01.T01:intron 40.0%
GAGTCGGTGTAAAACTAGAT+TGG - Chr6:22909524-22909543 None:intergenic 40.0%
GCTTTGTAATCCAAAAGGGT+TGG + Chr6:22908968-22908987 MsG0680031597.01.T01:intron 40.0%
GGAATAAATAGCAGGGAGTA+AGG - Chr6:22912286-22912305 None:intergenic 40.0%
GGAGAATCAAACCTAAACCT+TGG - Chr6:22908845-22908864 None:intergenic 40.0%
GTAAAACTAGATTGGACGGA+CGG - Chr6:22909516-22909535 None:intergenic 40.0%
GTGCTGAATCTTTACAGGAT+AGG + Chr6:22910407-22910426 MsG0680031597.01.T01:CDS 40.0%
GTGTCAATCCTACTAAAAGG+GGG + Chr6:22909484-22909503 MsG0680031597.01.T01:intron 40.0%
GTTGGGTTTAAATCACCACA+TGG + Chr6:22908986-22909005 MsG0680031597.01.T01:intron 40.0%
TAAGAAAAAAAGAGGAGGCC+AGG - Chr6:22909057-22909076 None:intergenic 40.0%
TAGAACCACCATAAAGAAGG+GGG - Chr6:22912307-22912326 None:intergenic 40.0%
TAGTTCCTGTGAAATTAGCC+CGG + Chr6:22912635-22912654 MsG0680031597.01.T01:intron 40.0%
TCTTCACTTGAACTAGAACC+AGG - Chr6:22908322-22908341 None:intergenic 40.0%
TGCAATGATGTAGTTCTCTG+GGG - Chr6:22909916-22909935 None:intergenic 40.0%
TGTAGGTGGTTTCTCATTCA+TGG + Chr6:22912200-22912219 MsG0680031597.01.T01:intron 40.0%
TGTCCTAATGCAGATTGAGA+TGG - Chr6:22910146-22910165 None:intergenic 40.0%
TTAGGAAATTCACTGCCATC+TGG + Chr6:22910040-22910059 MsG0680031597.01.T01:intron 40.0%
TTATCACCAATTGCTTGCGT+TGG + Chr6:22910652-22910671 MsG0680031597.01.T01:intron 40.0%
TTATTCCCCCTTCTTTATGG+TGG + Chr6:22912299-22912318 MsG0680031597.01.T01:intron 40.0%
! ATAGCCACATAGTGGGAAAT+TGG - Chr6:22913044-22913063 None:intergenic 40.0%
! ATGTATGGCATGATGGTGTA+TGG + Chr6:22910515-22910534 MsG0680031597.01.T01:intron 40.0%
! CCTTATGTAGCTTGTATTGG+AGG + Chr6:22912682-22912701 MsG0680031597.01.T01:intron 40.0%
! GGTTGACTTCCATTGAAAGA+TGG - Chr6:22910200-22910219 None:intergenic 40.0%
! TCCATAGCATCTCATTTTGG+TGG - Chr6:22908657-22908676 None:intergenic 40.0%
! TCTTGAAAGGACTCTGAAGA+TGG - Chr6:22910013-22910032 None:intergenic 40.0%
! TCTTGTTATGGGTTCCTTGT+AGG + Chr6:22912813-22912832 MsG0680031597.01.T01:intron 40.0%
! TGTCTAAAGTGACCAAGAGT+TGG + Chr6:22909712-22909731 MsG0680031597.01.T01:intron 40.0%
!! TAACGGACTTTATCTGAACC+AGG - Chr6:22908118-22908137 None:intergenic 40.0%
!!! TTTTGGCTTAAGCTCTTCTG+AGG + Chr6:22910885-22910904 MsG0680031597.01.T01:CDS 40.0%
AAAAAAAGAGGAGGCCAGGA+GGG - Chr6:22909053-22909072 None:intergenic 45.0%
AACAGATGAAGCTGATACGC+TGG - Chr6:22910102-22910121 None:intergenic 45.0%
AACCAATATGTTGCCCACCT+GGG + Chr6:22908776-22908795 MsG0680031597.01.T01:intron 45.0%
AAGCACAAGATGTGCCTACA+AGG - Chr6:22912830-22912849 None:intergenic 45.0%
AAGTCCGTTATGAAGGGAGA+TGG + Chr6:22908128-22908147 MsG0680031597.01.T01:CDS 45.0%
AATCCTACTAAAAGGGGGCA+TGG + Chr6:22909489-22909508 MsG0680031597.01.T01:intron 45.0%
AGAACCAGGACGCTAAAAGA+TGG - Chr6:22908308-22908327 None:intergenic 45.0%
AGACGTGAGTCTGTATGAGA+TGG - Chr6:22912103-22912122 None:intergenic 45.0%
AGAGAGAGAGAGAAACATCG+CGG - Chr6:22908419-22908438 None:intergenic 45.0%
AGAGCCAATAGCCACATAGT+GGG - Chr6:22913051-22913070 None:intergenic 45.0%
AGGCACATCTTGTGCTTGAT+TGG + Chr6:22912833-22912852 MsG0680031597.01.T01:intron 45.0%
AGTTCCTGTGAAATTAGCCC+GGG + Chr6:22912636-22912655 MsG0680031597.01.T01:intron 45.0%
ATCACACCAACGCAAGCAAT+TGG - Chr6:22910661-22910680 None:intergenic 45.0%
ATGAGGGCAATAAGGGCAAT+AGG - Chr6:22911325-22911344 None:intergenic 45.0%
ATTACCCGGGCTAATTTCAC+AGG - Chr6:22912643-22912662 None:intergenic 45.0%
CACCAAATGTTGCTGGCAAA+AGG - Chr6:22911988-22912007 None:intergenic 45.0%
CATGGACCAAAGACAGTATG+TGG + Chr6:22912777-22912796 MsG0680031597.01.T01:intron 45.0%
CCAGTGGATGGCAATAATCA+AGG + Chr6:22910832-22910851 MsG0680031597.01.T01:CDS 45.0%
CCATCCCTAAAATGAAGGGT+GGG + Chr6:22910315-22910334 MsG0680031597.01.T01:intron 45.0%
CCTTGATTATTGCCATCCAC+TGG - Chr6:22910835-22910854 None:intergenic 45.0%
CGTGTCTGAGTATGCTTCAT+AGG + Chr6:22913397-22913416 MsG0680031597.01.T01:three_prime_UTR 45.0%
CTAGCCATCTCCCTTCATAA+CGG - Chr6:22908135-22908154 None:intergenic 45.0%
CTTCAGTATCTAACACTGGC+TGG - Chr6:22913426-22913445 None:intergenic 45.0%
GAAGCAGCTCCATCTTTCAA+TGG + Chr6:22910188-22910207 MsG0680031597.01.T01:intron 45.0%
GAGTGATTCATGAAACGACC+AGG - Chr6:22908171-22908190 None:intergenic 45.0%
GATTCCATCTGCATCTCTCT+TGG - Chr6:22908391-22908410 None:intergenic 45.0%
GCACAAATACTCCTCGGATA+AGG + Chr6:22913272-22913291 MsG0680031597.01.T01:three_prime_UTR 45.0%
GCACCATCTCAATCTGCATT+AGG + Chr6:22910140-22910159 MsG0680031597.01.T01:intron 45.0%
GGCACATCTTGTGCTTGATT+GGG + Chr6:22912834-22912853 MsG0680031597.01.T01:intron 45.0%
GTCAAGTTAACCGATCTTGC+AGG - Chr6:22910067-22910086 None:intergenic 45.0%
TAACCAATATGTTGCCCACC+TGG + Chr6:22908775-22908794 MsG0680031597.01.T01:intron 45.0%
TCCATCCCTAAAATGAAGGG+TGG + Chr6:22910314-22910333 MsG0680031597.01.T01:intron 45.0%
TGAGTGTCTGTTGCCATAAC+AGG - Chr6:22910558-22910577 None:intergenic 45.0%
TGGACCAATTTCCCACTATG+TGG + Chr6:22913037-22913056 MsG0680031597.01.T01:intron 45.0%
! CCTTGGATTCCAGCTTTAAC+CGG - Chr6:22911000-22911019 None:intergenic 45.0%
! CGGTTAACTTGACCTTTCCA+AGG + Chr6:22910074-22910093 MsG0680031597.01.T01:intron 45.0%
! CTGACTTTTCCGTGTTCTAG+TGG + Chr6:22908232-22908251 MsG0680031597.01.T01:intron 45.0%
! CTTTTGCCAGCAACATTTGG+TGG + Chr6:22911986-22912005 MsG0680031597.01.T01:CDS 45.0%
! GATTCAGCACTTGAAGGTAC+TGG - Chr6:22910397-22910416 None:intergenic 45.0%
! GGTTTAGGTTTGATTCTCCC+TGG + Chr6:22908846-22908865 MsG0680031597.01.T01:intron 45.0%
! GTTGCCCACCCTTCATTTTA+GGG - Chr6:22910322-22910341 None:intergenic 45.0%
! TATGGGGTCGCTGTATTTTG+AGG - Chr6:22912031-22912050 None:intergenic 45.0%
! TGGCATGATGGTGTATGGAA+TGG + Chr6:22910520-22910539 MsG0680031597.01.T01:intron 45.0%
! TGTTGCCCACCCTTCATTTT+AGG - Chr6:22910323-22910342 None:intergenic 45.0%
!! ATGGGGTCGCTGTATTTTGA+GGG - Chr6:22912030-22912049 None:intergenic 45.0%
!! CTCCACTGATTTGTTCTCCA+AGG + Chr6:22911088-22911107 MsG0680031597.01.T01:intron 45.0%
!! GATTGACACTGATAACGGTG+AGG - Chr6:22909473-22909492 None:intergenic 45.0%
!! GGTTTCTGGTGTGTGATTGT+TGG + Chr6:22911408-22911427 MsG0680031597.01.T01:intron 45.0%
!! TTGAGAAGTTGGTGTGTGCA+CGG - Chr6:22912226-22912245 None:intergenic 45.0%
!!! CTCCACTGATTTTGCATCTG+AGG - Chr6:22910291-22910310 None:intergenic 45.0%
AAAAAAGAGGAGGCCAGGAG+GGG - Chr6:22909052-22909071 None:intergenic 50.0%
AACCCAGGTGGGCAACATAT+TGG - Chr6:22908781-22908800 None:intergenic 50.0%
AATATGTTGCCCACCTGGGT+TGG + Chr6:22908780-22908799 MsG0680031597.01.T01:intron 50.0%
AGCACACGAAATTGGCACCA+GGG - Chr6:22908866-22908885 None:intergenic 50.0%
ATCTGCATCTCTCTTGGCAG+CGG - Chr6:22908385-22908404 None:intergenic 50.0%
CCGGTTAAAGCTGGAATCCA+AGG + Chr6:22910997-22911016 MsG0680031597.01.T01:CDS 50.0%
CGTACAACACACCGAATGGT+GGG - Chr6:22909139-22909158 None:intergenic 50.0%
CTAGGCCATACATTCCCATG+TGG - Chr6:22909004-22909023 None:intergenic 50.0%
GAAAAAAAGAGGAGGCCAGG+AGG - Chr6:22909054-22909073 None:intergenic 50.0%
GAGAGCCAATAGCCACATAG+TGG - Chr6:22913052-22913071 None:intergenic 50.0%
GCAGGGAGTAAGGGACAAAT+AGG - Chr6:22912276-22912295 None:intergenic 50.0%
GGGATACCACCAAATGTTGC+TGG - Chr6:22911995-22912014 None:intergenic 50.0%
TAGCACACGAAATTGGCACC+AGG - Chr6:22908867-22908886 None:intergenic 50.0%
TGACAGGAACATCCAAGCAC+AGG + Chr6:22913149-22913168 MsG0680031597.01.T01:intron 50.0%
TGCTCACGACCACTAGAACA+CGG - Chr6:22908244-22908263 None:intergenic 50.0%
TTCCAATAGGAGCAACGCCT+TGG - Chr6:22911017-22911036 None:intergenic 50.0%
TTCCTTGTCAGAGCCCATGT+GGG - Chr6:22908094-22908113 None:intergenic 50.0%
TTCTGGCACTCATCTTCCAG+TGG + Chr6:22910816-22910835 MsG0680031597.01.T01:CDS 50.0%
TTTGAGGGAGCCAAGGTTCA+GGG - Chr6:22912015-22912034 None:intergenic 50.0%
! CAGTCCATCTTTTAGCGTCC+TGG + Chr6:22908301-22908320 MsG0680031597.01.T01:intron 50.0%
! GATGAAGGTACACCGACACT+AGG - Chr6:22910487-22910506 None:intergenic 50.0%
! GCCCTTTTGCCAGCAACATT+TGG + Chr6:22911983-22912002 MsG0680031597.01.T01:CDS 50.0%
! TTGGTGGTATCCCTGAACCT+TGG + Chr6:22912002-22912021 MsG0680031597.01.T01:CDS 50.0%
!! ATCCAAGGCGTTGCTCCTAT+TGG + Chr6:22911012-22911031 MsG0680031597.01.T01:CDS 50.0%
!! ATGGTGTTGGCTTAGGTCCT+TGG + Chr6:22908807-22908826 MsG0680031597.01.T01:intron 50.0%
!! CCCACCCTTCATTTTAGGGA+TGG - Chr6:22910318-22910337 None:intergenic 50.0%
!! GCTGTATTTTGAGGGAGCCA+AGG - Chr6:22912022-22912041 None:intergenic 50.0%
!! GGCTTAAGCTCTTCTGAGGT+TGG + Chr6:22910889-22910908 MsG0680031597.01.T01:intron 50.0%
!! GTTATTTAGGGGGAGGCACT+AGG - Chr6:22909022-22909041 None:intergenic 50.0%
!! TCGTCATTCTAGGGCCTGTT+TGG + Chr6:22911461-22911480 MsG0680031597.01.T01:intron 50.0%
!! TTTTGAGGGAGCCAAGGTTC+AGG - Chr6:22912016-22912035 None:intergenic 50.0%
AAGCTGATACGCTGGTGCCT+TGG - Chr6:22910094-22910113 None:intergenic 55.0%
ACCGATCTTGCAGGACCAGA+TGG - Chr6:22910058-22910077 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG + Chr6:22909099-22909118 MsG0680031597.01.T01:intron 55.0%
CAGGAACCAGTTGCGTCGTT+TGG + Chr6:22913168-22913187 MsG0680031597.01.T01:CDS 55.0%
CTAAAGCTCCCGCATACGCA+GGG + Chr6:22909100-22909119 MsG0680031597.01.T01:intron 55.0%
CTTCCTTGTCAGAGCCCATG+TGG - Chr6:22908095-22908114 None:intergenic 55.0%
GAACCAGTTGCGTCGTTTGG+CGG + Chr6:22913171-22913190 MsG0680031597.01.T01:CDS 55.0%
GATACGCTGGTGCCTTGGAA+AGG - Chr6:22910089-22910108 None:intergenic 55.0%
GCCATCTGGTCCTGCAAGAT+CGG + Chr6:22910054-22910073 MsG0680031597.01.T01:intron 55.0%
GCGTACAACACACCGAATGG+TGG - Chr6:22909140-22909159 None:intergenic 55.0%
GCTGCCAAGAGAGATGCAGA+TGG + Chr6:22908384-22908403 MsG0680031597.01.T01:intron 55.0%
GCTGCGTACAACACACCGAA+TGG - Chr6:22909143-22909162 None:intergenic 55.0%
GGACCTAAGCCAACACCATC+AGG - Chr6:22908806-22908825 None:intergenic 55.0%
GGCACTCATCTTCCAGTGGA+TGG + Chr6:22910820-22910839 MsG0680031597.01.T01:CDS 55.0%
GGCAGCGGCATTAGAATTCG+AGG - Chr6:22908370-22908389 None:intergenic 55.0%
GTGTGCTCCTCCCAAGGTTT+AGG + Chr6:22908831-22908850 MsG0680031597.01.T01:intron 55.0%
TTTCCGCCAAACGACGCAAC+TGG - Chr6:22913177-22913196 None:intergenic 55.0%
! AACCCACATGGGCTCTGACA+AGG + Chr6:22908089-22908108 MsG0680031597.01.T01:CDS 55.0%
! ACGCAACTGGTTCCTGTGCT+TGG - Chr6:22913164-22913183 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG - Chr6:22909095-22909114 None:intergenic 55.0%
! GCATCTGAGGTTGCAGCAGA+AGG - Chr6:22910278-22910297 None:intergenic 55.0%
! GCGACTTGGGATGTTTGCGT+AGG - Chr6:22910221-22910240 None:intergenic 55.0%
! GGTCCATGCCCCCTTTTAGT+AGG - Chr6:22909495-22909514 None:intergenic 55.0%
! TTCCAGCTTTAACCGGTGCC+TGG - Chr6:22910993-22911012 None:intergenic 55.0%
!! AACCAGGCACCGGTTAAAGC+TGG + Chr6:22910988-22911007 MsG0680031597.01.T01:intron 55.0%
!! GCACTTGAAGGTACTGGTGC+AGG - Chr6:22910391-22910410 None:intergenic 55.0%
!! GTTGCTGGCAAAAGGGCATC+TGG - Chr6:22911980-22911999 None:intergenic 55.0%
!! TGGCCTGATGGTGTTGGCTT+AGG + Chr6:22908800-22908819 MsG0680031597.01.T01:intron 55.0%
ACCATCAGGCCAACCCAGGT+GGG - Chr6:22908792-22908811 None:intergenic 60.0%
CAACACCATCAGGCCAACCC+AGG - Chr6:22908796-22908815 None:intergenic 60.0%
CTTGGAGTGTGCTCCTCCCA+AGG + Chr6:22908825-22908844 MsG0680031597.01.T01:intron 60.0%
GTTGCAGCAGAAGGCTGCTG+AGG - Chr6:22910269-22910288 None:intergenic 60.0%
TCCTCGGATAAGGCGTGTCC+CGG + Chr6:22913282-22913301 MsG0680031597.01.T01:three_prime_UTR 60.0%
! CTTGGGAGGAGCACACTCCA+AGG - Chr6:22908827-22908846 None:intergenic 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG - Chr6:22909094-22909113 None:intergenic 60.0%
! TGGGCTCTGACAAGGAAGCC+TGG + Chr6:22908097-22908116 MsG0680031597.01.T01:CDS 60.0%
!! CTGGGTTGGCCTGATGGTGT+TGG + Chr6:22908794-22908813 MsG0680031597.01.T01:intron 60.0%
ACCGGGACACGCCTTATCCG+AGG - Chr6:22913286-22913305 None:intergenic 65.0%
CACCATCAGGCCAACCCAGG+TGG - Chr6:22908793-22908812 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG + Chr6:22909112-22909131 MsG0680031597.01.T01:intron 65.0%
CGGGAAGGGGTCCCACCATT+CGG + Chr6:22909125-22909144 MsG0680031597.01.T01:intron 65.0%
CTTCCCGGACCCTGCGTATG+CGG - Chr6:22909112-22909131 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG + Chr6:22909111-22909130 MsG0680031597.01.T01:intron 65.0%
TTCCCGGACCCTGCGTATGC+GGG - Chr6:22909111-22909130 None:intergenic 65.0%
! CGAATGGTGGGACCCCTTCC+CGG - Chr6:22909127-22909146 None:intergenic 65.0%
CGCATACGCAGGGTCCGGGA+AGG + Chr6:22909110-22909129 MsG0680031597.01.T01:intron 70.0%
CTCCCGCATACGCAGGGTCC+GGG + Chr6:22909106-22909125 MsG0680031597.01.T01:intron 70.0%
GCTCCCGCATACGCAGGGTC+CGG + Chr6:22909105-22909124 MsG0680031597.01.T01:intron 70.0%
!! GCCCACCTGGGTTGGCCTGA+TGG + Chr6:22908788-22908807 MsG0680031597.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 22908085 22913689 22908085 ID=MsG0680031597.01;Name=MsG0680031597.01
Chr6 mRNA 22908085 22913689 22908085 ID=MsG0680031597.01.T01;Parent=MsG0680031597.01;Name=MsG0680031597.01.T01;_AED=0.43;_eAED=0.43;_QI=0|0.57|0.62|1|0.85|0.87|8|480|245
Chr6 exon 22908085 22908153 22908085 ID=MsG0680031597.01.T01:exon:14374;Parent=MsG0680031597.01.T01
Chr6 exon 22910358 22910531 22910358 ID=MsG0680031597.01.T01:exon:14375;Parent=MsG0680031597.01.T01
Chr6 exon 22910796 22910906 22910796 ID=MsG0680031597.01.T01:exon:14376;Parent=MsG0680031597.01.T01
Chr6 exon 22910994 22911065 22910994 ID=MsG0680031597.01.T01:exon:14377;Parent=MsG0680031597.01.T01
Chr6 exon 22911162 22911248 22911162 ID=MsG0680031597.01.T01:exon:14378;Parent=MsG0680031597.01.T01
Chr6 exon 22911944 22912067 22911944 ID=MsG0680031597.01.T01:exon:14379;Parent=MsG0680031597.01.T01
Chr6 exon 22912205 22912250 22912205 ID=MsG0680031597.01.T01:exon:14380;Parent=MsG0680031597.01.T01
Chr6 exon 22913155 22913689 22913155 ID=MsG0680031597.01.T01:exon:14381;Parent=MsG0680031597.01.T01
Chr6 CDS 22908085 22908153 22908085 ID=MsG0680031597.01.T01:cds;Parent=MsG0680031597.01.T01
Chr6 CDS 22910358 22910531 22910358 ID=MsG0680031597.01.T01:cds;Parent=MsG0680031597.01.T01
Chr6 CDS 22910796 22910906 22910796 ID=MsG0680031597.01.T01:cds;Parent=MsG0680031597.01.T01
Chr6 CDS 22910994 22911065 22910994 ID=MsG0680031597.01.T01:cds;Parent=MsG0680031597.01.T01
Chr6 CDS 22911162 22911248 22911162 ID=MsG0680031597.01.T01:cds;Parent=MsG0680031597.01.T01
Chr6 CDS 22911944 22912067 22911944 ID=MsG0680031597.01.T01:cds;Parent=MsG0680031597.01.T01
Chr6 CDS 22912205 22912250 22912205 ID=MsG0680031597.01.T01:cds;Parent=MsG0680031597.01.T01
Chr6 CDS 22913155 22913209 22913155 ID=MsG0680031597.01.T01:cds;Parent=MsG0680031597.01.T01
Chr6 three_prime_UTR 22913210 22913689 22913210 ID=MsG0680031597.01.T01:three_prime_utr;Parent=MsG0680031597.01.T01
Gene Sequence

>MsG0680031597.01.T01

ATGGAACCCACATGGGCTCTGACAAGGAAGCCTGGTTCAGATAAAGTCCGTTATGAAGGGAGATGGCTATTCATATCATCTACTACACAAGTGGAAATTCCTGCACCAGTACCTTCAAGTGCTGAATCTTTACAGGATAGGTTTGATCCATTTTCAACCTTAAATGGAAATTTCCAAATGCCATCTTTTGAAATGCCTAGTGTCGGTGTACCTTCATCTGTAATCTATGTATGGCATGATGGTCCATGGAATGCATTTGAAGATTCTGGCACTCATCTTCCAGTGGATGGCAATAATCAAGGATTACAATCGCATAATTTCTCATCAGAAAGTTTTGGCTTAAGCTCTTCTGAGGCACCGGTTAAAGCTGGAATCCAAGGCGTTGCTCCTATTGGAACATTTGATAATCATGAATTCCCATCAAATGGAGATATTCAACCTAATGGAATCAATCGTAAATCAACTAATCCATTTGATTTTCCCTTTGATTCTGATGTAGAACAGAACAATATGTTCCTTGATATGAACTCTTTGCAAGCTGCTCTGCCAGATGCCCTTTTGCCAGCAACATTTGGTGGTATCCCTGAACCTTGGCTCCCTCAAAATACAGCGACCCCATATATTTCATCTGCAGAAGGTGGTTTCTCATTCATGGCCGTGCACACACCAACTTCTCAATTACAGAACATCCAAGCACAGGAACCAGTTGCGTCGTTTGGCGGAAATCCATTTGCATAG
Protein sequence

>MsG0680031597.01.T01

MEPTWALTRKPGSDKVRYEGRWLFISSTTQVEIPAPVPSSAESLQDRFDPFSTLNGNFQMPSFEMPSVGVPSSVIYVWHDGPWNAFEDSGTHLPVDGNNQGLQSHNFSSESFGLSSSEAPVKAGIQGVAPIGTFDNHEFPSNGDIQPNGINRKSTNPFDFPFDSDVEQNNMFLDMNSLQAALPDALLPATFGGIPEPWLPQNTATPYISSAEGGFSFMAVHTPTSQLQNIQAQEPVASFGGNPFA*