Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005303.01.T01 | XP_013469537.1 | 97.732 | 441 | 10 | 0 | 1 | 441 | 1 | 441 | 0 | 873 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005303.01.T01 | Q8VZ14 | 65.837 | 442 | 137 | 4 | 13 | 441 | 8 | 448 | 0 | 526 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005303.01.T01 | A0A072VZT8 | 97.732 | 441 | 10 | 0 | 1 | 441 | 1 | 441 | 0.0 | 873 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048761.01 | MsG0180005303.01 | 0.809119 | 2.214684e-50 | 1.289314e-47 |
| MsG0080048878.01 | MsG0180005303.01 | -0.802202 | 6.274189e-49 | 3.054871e-46 |
| MsG0080049147.01 | MsG0180005303.01 | -0.808853 | 2.525765e-50 | 1.459896e-47 |
| MsG0180000240.01 | MsG0180005303.01 | 0.814670 | 1.369091e-51 | 9.243863e-49 |
| MsG0180000355.01 | MsG0180005303.01 | -0.834647 | 2.655620e-56 | 3.171159e-53 |
| MsG0180000444.01 | MsG0180005303.01 | -0.842037 | 3.301299e-58 | 4.942355e-55 |
| MsG0180000794.01 | MsG0180005303.01 | -0.810499 | 1.118253e-50 | 6.751511e-48 |
| MsG0180001153.01 | MsG0180005303.01 | -0.814499 | 1.493616e-51 | 1.003924e-48 |
| MsG0180001712.01 | MsG0180005303.01 | -0.824937 | 6.157072e-54 | 5.532808e-51 |
| MsG0180003246.01 | MsG0180005303.01 | 0.802793 | 4.739720e-49 | 2.342937e-46 |
| MsG0180003651.01 | MsG0180005303.01 | -0.801705 | 7.938542e-49 | 3.816672e-46 |
| MsG0180003697.01 | MsG0180005303.01 | -0.859294 | 4.568410e-63 | 1.200477e-59 |
| MsG0180003767.01 | MsG0180005303.01 | 0.820306 | 7.355275e-53 | 5.798512e-50 |
| MsG0180003821.01 | MsG0180005303.01 | -0.802869 | 4.572426e-49 | 2.264515e-46 |
| MsG0180003885.01 | MsG0180005303.01 | -0.802211 | 6.247297e-49 | 3.042527e-46 |
| MsG0180004130.01 | MsG0180005303.01 | -0.801185 | 1.014616e-48 | 4.814567e-46 |
| MsG0180004605.01 | MsG0180005303.01 | 0.864403 | 1.247177e-64 | 3.911088e-61 |
| MsG0180004750.01 | MsG0180005303.01 | -0.809166 | 2.164499e-50 | 1.261659e-47 |
| MsG0180004765.01 | MsG0180005303.01 | -0.822684 | 2.076207e-53 | 1.750057e-50 |
| MsG0180004886.01 | MsG0180005303.01 | 0.825493 | 4.547940e-54 | 4.151809e-51 |
| MsG0180005153.01 | MsG0180005303.01 | -0.801708 | 7.925529e-49 | 3.810779e-46 |
| MsG0180005303.01 | MsG0180005330.01 | 0.848234 | 6.978385e-60 | 1.272166e-56 |
| MsG0180005303.01 | MsG0180005382.01 | -0.800283 | 1.549546e-48 | 7.187072e-46 |
| MsG0180005303.01 | MsG0180005424.01 | -0.824371 | 8.367998e-54 | 7.397653e-51 |
| MsG0180005303.01 | MsG0180005763.01 | -0.838067 | 3.584526e-57 | 4.746955e-54 |
| MsG0180005303.01 | MsG0180005913.01 | -0.815419 | 9.334831e-52 | 6.432469e-49 |
| MsG0180005303.01 | MsG0180006025.01 | -0.800885 | 1.168130e-48 | 5.501518e-46 |
| MsG0180005303.01 | MsG0180006064.01 | 0.832312 | 1.015642e-55 | 1.130807e-52 |
| MsG0180005303.01 | MsG0180006096.01 | -0.814624 | 1.401559e-51 | 9.451700e-49 |
| MsG0180005303.01 | MsG0180006144.01 | -0.801028 | 1.092037e-48 | 5.161930e-46 |
| MsG0180005303.01 | MsG0280006302.01 | 0.861613 | 9.069166e-64 | 2.581325e-60 |
| MsG0180005303.01 | MsG0280006306.01 | 0.840030 | 1.111247e-57 | 1.563218e-54 |
| MsG0180005303.01 | MsG0280006711.01 | 0.815729 | 7.963763e-52 | 5.534929e-49 |
| MsG0180005303.01 | MsG0280007165.01 | 0.839619 | 1.421769e-57 | 1.974304e-54 |
| MsG0180005303.01 | MsG0280007193.01 | 0.839065 | 1.979571e-57 | 2.702566e-54 |
| MsG0180005303.01 | MsG0280007211.01 | 0.806156 | 9.433141e-50 | 5.083421e-47 |
| MsG0180005303.01 | MsG0280007224.01 | 0.829133 | 6.103324e-55 | 6.190907e-52 |
| MsG0180005303.01 | MsG0280007547.01 | -0.843832 | 1.099100e-58 | 1.741082e-55 |
| MsG0180005303.01 | MsG0280007763.01 | -0.813892 | 2.033423e-51 | 1.344377e-48 |
| MsG0180005303.01 | MsG0280007903.01 | -0.818429 | 1.969230e-52 | 1.473765e-49 |
| MsG0180005303.01 | MsG0280008660.01 | 0.817901 | 2.592259e-52 | 1.911901e-49 |
| MsG0180005303.01 | MsG0280008928.01 | -0.806336 | 8.644099e-50 | 4.679521e-47 |
| MsG0180005303.01 | MsG0280008929.01 | -0.813633 | 2.318749e-51 | 1.522272e-48 |
| MsG0180005303.01 | MsG0280010082.01 | -0.803433 | 3.494681e-49 | 1.755908e-46 |
| MsG0180005303.01 | MsG0280010378.01 | -0.817931 | 2.552742e-52 | 1.884374e-49 |
| MsG0180005303.01 | MsG0280010411.01 | -0.803739 | 3.019453e-49 | 1.529131e-46 |
| MsG0180005303.01 | MsG0280010532.01 | 0.859472 | 4.039052e-63 | 1.067974e-59 |
| MsG0180005303.01 | MsG0280010776.01 | -0.809619 | 1.730522e-50 | 1.021013e-47 |
| MsG0180005303.01 | MsG0280011059.01 | 0.841371 | 4.947525e-58 | 7.254628e-55 |
| MsG0180005303.01 | MsG0280011304.01 | -0.842363 | 2.706257e-58 | 4.093976e-55 |
| MsG0180005303.01 | MsG0280011387.01 | -0.805057 | 1.603731e-49 | 8.402142e-47 |
| MsG0180005303.01 | MsG0380011704.01 | -0.808640 | 2.804180e-50 | 1.611765e-47 |
| MsG0180005303.01 | MsG0380011844.01 | -0.811204 | 7.867868e-51 | 4.840292e-48 |
| MsG0180005303.01 | MsG0380012005.01 | -0.811389 | 7.176026e-51 | 4.436117e-48 |
| MsG0180005303.01 | MsG0380012012.01 | -0.816021 | 6.854404e-52 | 4.801945e-49 |
| MsG0180005303.01 | MsG0380012122.01 | -0.855686 | 5.340709e-62 | 1.243275e-58 |
| MsG0180005303.01 | MsG0380012374.01 | -0.801254 | 9.818932e-49 | 4.667553e-46 |
| MsG0180005303.01 | MsG0380012570.01 | -0.804939 | 1.697547e-49 | 8.867184e-47 |
| MsG0180005303.01 | MsG0380015066.01 | 0.829661 | 4.543538e-55 | 4.680743e-52 |
| MsG0180005303.01 | MsG0380015166.01 | -0.810899 | 9.161740e-51 | 5.591317e-48 |
| MsG0180005303.01 | MsG0380015466.01 | -0.811238 | 7.738325e-51 | 4.764762e-48 |
| MsG0180005303.01 | MsG0380015533.01 | -0.809991 | 1.439221e-50 | 8.574721e-48 |
| MsG0180005303.01 | MsG0380015598.01 | 0.810793 | 9.659702e-51 | 5.878242e-48 |
| MsG0180005303.01 | MsG0380015703.01 | -0.818745 | 1.669534e-52 | 1.260334e-49 |
| MsG0180005303.01 | MsG0380015965.01 | -0.815512 | 8.901736e-52 | 6.149959e-49 |
| MsG0180005303.01 | MsG0380016118.01 | 0.830550 | 2.756950e-55 | 2.914023e-52 |
| MsG0180005303.01 | MsG0380016191.01 | 0.862418 | 5.139351e-64 | 1.504171e-60 |
| MsG0180005303.01 | MsG0380016347.01 | 0.860073 | 2.662850e-63 | 7.189009e-60 |
| MsG0180005303.01 | MsG0380016671.01 | -0.810763 | 9.806249e-51 | 5.962676e-48 |
| MsG0180005303.01 | MsG0380016740.01 | -0.819456 | 1.150722e-52 | 8.859793e-50 |
| MsG0180005303.01 | MsG0380016820.01 | -0.854214 | 1.428611e-61 | 3.167633e-58 |
| MsG0180005303.01 | MsG0380016828.01 | 0.815639 | 8.337635e-52 | 5.780456e-49 |
| MsG0180005303.01 | MsG0380017023.01 | -0.822450 | 2.353400e-53 | 1.970565e-50 |
| MsG0180005303.01 | MsG0380017085.01 | -0.858797 | 6.435645e-63 | 1.662536e-59 |
| MsG0180005303.01 | MsG0380017178.01 | 0.803375 | 3.592623e-49 | 1.802374e-46 |
| MsG0180005303.01 | MsG0380017263.01 | 0.831342 | 1.762223e-55 | 1.906897e-52 |
| MsG0180005303.01 | MsG0380017498.01 | -0.804834 | 1.785607e-49 | 9.301787e-47 |
| MsG0180005303.01 | MsG0380017589.01 | -0.800884 | 1.169038e-48 | 5.505478e-46 |
| MsG0180005303.01 | MsG0380017941.01 | -0.826160 | 3.159913e-54 | 2.939967e-51 |
| MsG0180005303.01 | MsG0480018402.01 | -0.812768 | 3.590629e-51 | 2.302808e-48 |
| MsG0180005303.01 | MsG0480018850.01 | -0.812593 | 3.921718e-51 | 2.503713e-48 |
| MsG0180005303.01 | MsG0480018911.01 | -0.833061 | 6.620913e-56 | 7.539824e-53 |
| MsG0180005303.01 | MsG0480019126.01 | -0.803141 | 4.017132e-49 | 2.003300e-46 |
| MsG0180005303.01 | MsG0480019380.01 | -0.801977 | 6.980139e-49 | 3.379115e-46 |
| MsG0180005303.01 | MsG0480019591.01 | 0.801181 | 1.016424e-48 | 4.822692e-46 |
| MsG0180005303.01 | MsG0480019689.01 | 0.823519 | 1.326276e-53 | 1.144579e-50 |
| MsG0180005303.01 | MsG0480019984.01 | 0.833886 | 4.120524e-56 | 4.809889e-53 |
| MsG0180005303.01 | MsG0480020024.01 | -0.850712 | 1.422287e-60 | 2.811063e-57 |
| MsG0180005303.01 | MsG0480020025.01 | -0.815775 | 7.776624e-52 | 5.411803e-49 |
| MsG0180005303.01 | MsG0480020136.01 | -0.811318 | 7.432363e-51 | 4.585978e-48 |
| MsG0180005303.01 | MsG0480020327.01 | 0.806313 | 8.739713e-50 | 4.728552e-47 |
| MsG0180005303.01 | MsG0480020788.01 | -0.816740 | 4.731069e-52 | 3.380175e-49 |
| MsG0180005303.01 | MsG0480020887.01 | -0.811172 | 7.995604e-51 | 4.914609e-48 |
| MsG0180005303.01 | MsG0480021037.01 | -0.813699 | 2.243046e-51 | 1.475213e-48 |
| MsG0180005303.01 | MsG0480021768.01 | -0.844847 | 5.867705e-59 | 9.595698e-56 |
| MsG0180005303.01 | MsG0480021776.01 | 0.841089 | 5.869121e-58 | 8.529592e-55 |
| MsG0180005303.01 | MsG0480023073.01 | -0.826819 | 2.200501e-54 | 2.086281e-51 |
| MsG0180005303.01 | MsG0480023136.01 | 0.810107 | 1.358842e-50 | 8.120261e-48 |
| MsG0180005303.01 | MsG0480023400.01 | 0.800259 | 1.567413e-48 | 7.265178e-46 |
| MsG0180005303.01 | MsG0480023448.01 | -0.815767 | 7.807532e-52 | 5.432166e-49 |
| MsG0180005303.01 | MsG0480023652.01 | -0.840258 | 9.688314e-58 | 1.372366e-54 |
| MsG0180005303.01 | MsG0480023660.01 | -0.846574 | 1.993794e-59 | 3.446762e-56 |
| MsG0180005303.01 | MsG0480023776.01 | -0.808786 | 2.609455e-50 | 1.505605e-47 |
| MsG0180005303.01 | MsG0480023814.01 | -0.813723 | 2.215714e-51 | 1.458210e-48 |
| MsG0180005303.01 | MsG0480023974.01 | 0.811641 | 6.325772e-51 | 3.936392e-48 |
| MsG0180005303.01 | MsG0580024161.01 | -0.824687 | 7.050651e-54 | 6.291075e-51 |
| MsG0180005303.01 | MsG0580024363.01 | 0.806615 | 7.546509e-50 | 4.114523e-47 |
| MsG0180005303.01 | MsG0580024495.01 | -0.801146 | 1.033448e-48 | 4.899222e-46 |
| MsG0180005303.01 | MsG0580024790.01 | 0.841234 | 5.376567e-58 | 7.849118e-55 |
| MsG0180005303.01 | MsG0580024930.01 | 0.832725 | 8.022888e-56 | 9.044849e-53 |
| MsG0180005303.01 | MsG0580025400.01 | -0.817361 | 3.432105e-52 | 2.494142e-49 |
| MsG0180005303.01 | MsG0580026488.01 | 0.840257 | 9.697134e-58 | 1.373550e-54 |
| MsG0180005303.01 | MsG0580026511.01 | -0.803209 | 3.889001e-49 | 1.942797e-46 |
| MsG0180005303.01 | MsG0580027103.01 | -0.857033 | 2.149779e-62 | 5.233718e-59 |
| MsG0180005303.01 | MsG0580028418.01 | -0.831011 | 2.125684e-55 | 2.277737e-52 |
| MsG0180005303.01 | MsG0580028582.01 | -0.800497 | 1.401723e-48 | 6.536579e-46 |
| MsG0180005303.01 | MsG0580028630.01 | -0.823715 | 1.192957e-53 | 1.035417e-50 |
| MsG0180005303.01 | MsG0580029376.01 | -0.800295 | 1.540813e-48 | 7.148768e-46 |
| MsG0180005303.01 | MsG0580029549.01 | -0.800736 | 1.252886e-48 | 5.878059e-46 |
| MsG0180005303.01 | MsG0580029879.01 | -0.810201 | 1.296610e-50 | 7.766979e-48 |
| MsG0180005303.01 | MsG0580029919.01 | -0.836960 | 6.889945e-57 | 8.820296e-54 |
| MsG0180005303.01 | MsG0580029925.01 | -0.814832 | 1.260398e-51 | 8.547294e-49 |
| MsG0180005303.01 | MsG0580029999.01 | 0.803042 | 4.209468e-49 | 2.093918e-46 |
| MsG0180005303.01 | MsG0580030144.01 | -0.801831 | 7.479598e-49 | 3.607720e-46 |
| MsG0180005303.01 | MsG0680030350.01 | -0.804474 | 2.122802e-49 | 1.095517e-46 |
| MsG0180005303.01 | MsG0680030356.01 | 0.852514 | 4.392274e-61 | 9.199944e-58 |
| MsG0180005303.01 | MsG0680030555.01 | -0.849522 | 3.064605e-60 | 5.825175e-57 |
| MsG0180005303.01 | MsG0680030636.01 | -0.819511 | 1.117716e-52 | 8.618895e-50 |
| MsG0180005303.01 | MsG0680030764.01 | -0.805384 | 1.370185e-49 | 7.238788e-47 |
| MsG0180005303.01 | MsG0680030992.01 | -0.811358 | 7.286882e-51 | 4.500840e-48 |
| MsG0180005303.01 | MsG0680031446.01 | 0.836758 | 7.756090e-57 | 9.869284e-54 |
| MsG0180005303.01 | MsG0680031597.01 | 0.861573 | 9.329937e-64 | 2.652094e-60 |
| MsG0180005303.01 | MsG0680031805.01 | 0.858528 | 7.745918e-63 | 1.982810e-59 |
| MsG0180005303.01 | MsG0680032460.01 | 0.819410 | 1.178441e-52 | 9.061251e-50 |
| MsG0180005303.01 | MsG0680032510.01 | 0.837511 | 4.978226e-57 | 6.481686e-54 |
| MsG0180005303.01 | MsG0680032516.01 | -0.810340 | 1.210390e-50 | 7.276967e-48 |
| MsG0180005303.01 | MsG0680035580.01 | -0.806730 | 7.136369e-50 | 3.902536e-47 |
| MsG0180005303.01 | MsG0680035765.01 | -0.811555 | 6.603643e-51 | 4.100328e-48 |
| MsG0180005303.01 | MsG0680035854.01 | -0.802605 | 5.181771e-49 | 2.549087e-46 |
| MsG0180005303.01 | MsG0780035960.01 | -0.816414 | 5.597747e-52 | 3.963830e-49 |
| MsG0180005303.01 | MsG0780036186.01 | -0.818009 | 2.451514e-52 | 1.813441e-49 |
| MsG0180005303.01 | MsG0780036190.01 | -0.804365 | 2.236653e-49 | 1.151086e-46 |
| MsG0180005303.01 | MsG0780036486.01 | -0.813529 | 2.444616e-51 | 1.600454e-48 |
| MsG0180005303.01 | MsG0780036544.01 | 0.830583 | 2.706541e-55 | 2.863512e-52 |
| MsG0180005303.01 | MsG0780036964.01 | -0.829770 | 4.273665e-55 | 4.417208e-52 |
| MsG0180005303.01 | MsG0780037093.01 | -0.806747 | 7.077513e-50 | 3.872026e-47 |
| MsG0180005303.01 | MsG0780038309.01 | 0.807443 | 5.042552e-50 | 2.808941e-47 |
| MsG0180005303.01 | MsG0780038584.01 | 0.809833 | 1.556006e-50 | 9.232080e-48 |
| MsG0180005303.01 | MsG0780039258.01 | -0.816483 | 5.403677e-52 | 3.833494e-49 |
| MsG0180005303.01 | MsG0780039429.01 | -0.825449 | 4.658584e-54 | 4.247232e-51 |
| MsG0180005303.01 | MsG0780039438.01 | -0.835009 | 2.152945e-56 | 2.599045e-53 |
| MsG0180005303.01 | MsG0780039867.01 | 0.802521 | 5.393592e-49 | 2.647493e-46 |
| MsG0180005303.01 | MsG0780039997.01 | 0.823437 | 1.386045e-53 | 1.193333e-50 |
| MsG0180005303.01 | MsG0780040148.01 | 0.809158 | 2.172436e-50 | 1.266038e-47 |
| MsG0180005303.01 | MsG0780040566.01 | 0.805889 | 1.073556e-49 | 5.745903e-47 |
| MsG0180005303.01 | MsG0780040596.01 | -0.800218 | 1.597848e-48 | 7.398589e-46 |
| MsG0180005303.01 | MsG0780041137.01 | -0.826184 | 3.118765e-54 | 2.903770e-51 |
| MsG0180005303.01 | MsG0780041300.01 | -0.808687 | 2.739907e-50 | 1.576761e-47 |
| MsG0180005303.01 | MsG0780041441.01 | -0.815924 | 7.203415e-52 | 5.032810e-49 |
| MsG0180005303.01 | MsG0780041507.01 | -0.806425 | 8.276930e-50 | 4.490991e-47 |
| MsG0180005303.01 | MsG0780041729.01 | 0.866956 | 1.950853e-65 | 6.696407e-62 |
| MsG0180005303.01 | MsG0780041747.01 | -0.830810 | 2.380823e-55 | 2.536072e-52 |
| MsG0180005303.01 | MsG0880042062.01 | -0.838685 | 2.483706e-57 | 3.351818e-54 |
| MsG0180005303.01 | MsG0880042128.01 | -0.812040 | 5.178366e-51 | 3.257002e-48 |
| MsG0180005303.01 | MsG0880042134.01 | -0.801056 | 1.078220e-48 | 5.100069e-46 |
| MsG0180005303.01 | MsG0880042700.01 | -0.801690 | 7.995602e-49 | 3.842605e-46 |
| MsG0180005303.01 | MsG0880042795.01 | -0.805242 | 1.467352e-49 | 7.723909e-47 |
| MsG0180005303.01 | MsG0880044101.01 | -0.807951 | 3.931973e-50 | 2.219531e-47 |
| MsG0180005303.01 | MsG0880044142.01 | -0.831164 | 1.948991e-55 | 2.097805e-52 |
| MsG0180005303.01 | MsG0880045010.01 | 0.835899 | 1.282530e-56 | 1.590158e-53 |
| MsG0180005303.01 | MsG0880045480.01 | 0.825995 | 3.458590e-54 | 3.202959e-51 |
| MsG0180005303.01 | MsG0880045605.01 | 0.800896 | 1.162138e-48 | 5.474766e-46 |
| MsG0180005303.01 | MsG0880045765.01 | -0.828270 | 9.867071e-55 | 9.759411e-52 |
| MsG0180005303.01 | MsG0880046289.01 | 0.823119 | 1.643998e-53 | 1.402918e-50 |
| MsG0180005303.01 | MsG0880046963.01 | 0.862199 | 6.001065e-64 | 1.742980e-60 |
| MsG0180005303.01 | MsG0880047481.01 | 0.822909 | 1.840524e-53 | 1.561305e-50 |
| MsG0180005303.01 | MsG0880047696.01 | -0.805031 | 1.624093e-49 | 8.502831e-47 |
| MsG0180005303.01 | MsG0880047703.01 | -0.805778 | 1.132879e-49 | 6.046315e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005303.01.T01 | MTR_1g096780 | 97.732 | 441 | 10 | 0 | 1 | 441 | 1 | 441 | 0.0 | 873 |
| MsG0180005303.01.T01 | MTR_8g073120 | 31.783 | 129 | 69 | 7 | 170 | 287 | 36 | 156 | 2.62e-12 | 66.2 |
| MsG0180005303.01.T01 | MTR_2g035800 | 28.689 | 122 | 75 | 5 | 167 | 283 | 36 | 150 | 3.15e-12 | 64.7 |
| MsG0180005303.01.T01 | MTR_1g047180 | 37.179 | 78 | 44 | 2 | 200 | 277 | 652 | 724 | 5.65e-12 | 68.2 |
| MsG0180005303.01.T01 | MTR_5g026260 | 33.750 | 80 | 51 | 1 | 213 | 292 | 483 | 560 | 8.04e-12 | 67.4 |
| MsG0180005303.01.T01 | MTR_4g064550 | 56.000 | 50 | 21 | 1 | 228 | 277 | 208 | 256 | 1.81e-11 | 65.1 |
| MsG0180005303.01.T01 | MTR_3g067995 | 52.830 | 53 | 24 | 1 | 234 | 286 | 212 | 263 | 1.92e-11 | 64.7 |
| MsG0180005303.01.T01 | MTR_3g099650 | 31.148 | 122 | 71 | 6 | 167 | 277 | 59 | 178 | 3.04e-11 | 65.1 |
| MsG0180005303.01.T01 | MTR_4g064560 | 56.000 | 50 | 21 | 1 | 228 | 277 | 202 | 250 | 3.98e-11 | 63.9 |
| MsG0180005303.01.T01 | MTR_7g116180 | 32.374 | 139 | 71 | 6 | 160 | 277 | 2 | 138 | 6.76e-11 | 61.6 |
| MsG0180005303.01.T01 | MTR_7g116220 | 31.111 | 135 | 64 | 5 | 171 | 277 | 8 | 141 | 7.44e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005303.01.T01 | AT1G71980 | 65.837 | 442 | 137 | 4 | 13 | 441 | 8 | 448 | 0.0 | 526 |
| MsG0180005303.01.T01 | AT4G09560 | 51.474 | 441 | 181 | 11 | 20 | 439 | 18 | 446 | 4.11e-126 | 373 |
| MsG0180005303.01.T01 | AT1G35630 | 56.419 | 296 | 129 | 0 | 10 | 305 | 8 | 303 | 4.03e-120 | 353 |
| MsG0180005303.01.T01 | AT1G35625 | 55.776 | 303 | 120 | 2 | 10 | 305 | 8 | 303 | 1.66e-115 | 341 |
| MsG0180005303.01.T01 | AT1G22670 | 47.917 | 432 | 182 | 11 | 21 | 440 | 22 | 422 | 6.85e-114 | 341 |
| MsG0180005303.01.T01 | AT5G66160 | 44.485 | 272 | 141 | 5 | 13 | 282 | 16 | 279 | 9.17e-67 | 216 |
| MsG0180005303.01.T01 | AT5G66160 | 44.485 | 272 | 141 | 5 | 13 | 282 | 16 | 279 | 2.62e-66 | 214 |
| MsG0180005303.01.T01 | AT4G09120 | 29.545 | 220 | 139 | 7 | 162 | 374 | 47 | 257 | 1.37e-13 | 72.0 |
| MsG0180005303.01.T01 | AT5G07225 | 38.356 | 73 | 40 | 2 | 208 | 280 | 165 | 232 | 3.12e-12 | 66.6 |
| MsG0180005303.01.T01 | AT1G33480 | 32.432 | 148 | 86 | 7 | 208 | 344 | 75 | 219 | 8.77e-12 | 65.9 |
| MsG0180005303.01.T01 | AT3G18773 | 27.742 | 155 | 98 | 4 | 133 | 277 | 22 | 172 | 1.19e-11 | 64.7 |
| MsG0180005303.01.T01 | AT3G55530 | 54.000 | 50 | 22 | 1 | 234 | 283 | 210 | 258 | 1.56e-11 | 65.1 |
| MsG0180005303.01.T01 | AT1G20823 | 38.889 | 72 | 42 | 2 | 208 | 278 | 84 | 154 | 4.32e-11 | 62.4 |
| MsG0180005303.01.T01 | AT3G10910 | 40.278 | 72 | 40 | 3 | 208 | 278 | 88 | 157 | 5.11e-11 | 62.0 |
| MsG0180005303.01.T01 | AT4G09100 | 37.662 | 77 | 44 | 3 | 204 | 277 | 52 | 127 | 5.80e-11 | 60.5 |
Find 145 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAATTTGTACATATATTAT+TGG | 0.149050 | 1:+89943587 | None:intergenic |
| ATGCTGCCTGTGTGGATTCT+TGG | 0.196122 | 1:-89944646 | MsG0180005303.01.T01:CDS |
| TTCTTTACATGTGATGATTA+TGG | 0.223372 | 1:-89943883 | MsG0180005303.01.T01:three_prime_UTR |
| AAAATCATCCAAAGAGAAAT+TGG | 0.236083 | 1:+89947620 | None:intergenic |
| TTTCTATTCAATTGCTTTGA+TGG | 0.239348 | 1:-89947571 | MsG0180005303.01.T01:exon |
| CAAAATCCCCAATTTCTCTT+TGG | 0.270427 | 1:-89947628 | MsG0180005303.01.T01:five_prime_UTR |
| TCATCTTCAGCAATACAAAT+TGG | 0.282025 | 1:-89944470 | MsG0180005303.01.T01:CDS |
| CTTGCATCACGCTTGCAAAC+TGG | 0.302893 | 1:+89944599 | None:intergenic |
| ATAATATTGTGACAGCAAAA+TGG | 0.306240 | 1:+89947769 | None:intergenic |
| TGTGTGAAGCTAGAGATCTT+TGG | 0.332608 | 1:+89944315 | None:intergenic |
| ATGACTTCCTTGTTGGCATC+TGG | 0.337707 | 1:-89943936 | MsG0180005303.01.T01:three_prime_UTR |
| GATGATATTGAAGCTAATTT+CGG | 0.338035 | 1:-89947447 | MsG0180005303.01.T01:intron |
| CAGAGCTACGGCTGAAGCTT+AGG | 0.338278 | 1:+89944357 | None:intergenic |
| GCTCCATCGGTCAAAGGTTC+TGG | 0.338386 | 1:-89946666 | MsG0180005303.01.T01:CDS |
| TCTCATGTTCGTGAATTTCA+TGG | 0.340632 | 1:-89945596 | MsG0180005303.01.T01:CDS |
| AAGAGGCTCTGCCAAGAATA+AGG | 0.342445 | 1:+89946632 | None:intergenic |
| TGCGTCTGCCAACTCCCTTC+CGG | 0.343050 | 1:-89944123 | MsG0180005303.01.T01:CDS |
| TGGATTCTTGGCTTACTTCA+TGG | 0.348035 | 1:-89944634 | MsG0180005303.01.T01:CDS |
| CTGGCAAATGACTTCCTTGT+TGG | 0.353290 | 1:-89943943 | MsG0180005303.01.T01:three_prime_UTR |
| GCTGCTAAGGTTGTGTTGAT+TGG | 0.367855 | 1:-89947492 | MsG0180005303.01.T01:CDS |
| GTATTTGTTTCAAAAGCTTC+GGG | 0.371506 | 1:-89945803 | MsG0180005303.01.T01:CDS |
| GGGGTGTAGCTTTGAGGAAA+AGG | 0.371973 | 1:-89946532 | MsG0180005303.01.T01:CDS |
| GGTATTTGTTTCAAAAGCTT+CGG | 0.372526 | 1:-89945804 | MsG0180005303.01.T01:CDS |
| TTCTATTCAATTGCTTTGAT+GGG | 0.379978 | 1:-89947570 | MsG0180005303.01.T01:exon |
| CTTAGAGAAGGCTGATTGTA+AGG | 0.389822 | 1:+89944401 | None:intergenic |
| GTTAGCTATGTCTGCAGTGC+TGG | 0.390348 | 1:-89945675 | MsG0180005303.01.T01:CDS |
| CAATAATATATGTACAAATT+CGG | 0.399084 | 1:-89943586 | MsG0180005303.01.T01:three_prime_UTR |
| CTCCAGCGCAATAATCTTCA+AGG | 0.399738 | 1:+89945483 | None:intergenic |
| GGAATGTTGAATTGTTCAAT+TGG | 0.409738 | 1:-89944102 | MsG0180005303.01.T01:exon |
| AAATCATCCAAAGAGAAATT+GGG | 0.410830 | 1:+89947621 | None:intergenic |
| CCACTTGTTTCTTCGTCCGC+AGG | 0.412166 | 1:-89945652 | MsG0180005303.01.T01:CDS |
| GCACTGCAGACATAGCTAAC+AGG | 0.412818 | 1:+89945678 | None:intergenic |
| GAGTGGATGCTGCTGATGAC+TGG | 0.415213 | 1:+89944181 | None:intergenic |
| TAATATTGTGACAGCAAAAT+GGG | 0.415946 | 1:+89947770 | None:intergenic |
| AGAATACGGAGCCTTATTCT+TGG | 0.417360 | 1:-89946643 | MsG0180005303.01.T01:CDS |
| ACATAATCTCATCATTCAAT+TGG | 0.419264 | 1:+89943667 | None:intergenic |
| CTGCTAAGGTTGTGTTGATT+GGG | 0.421036 | 1:-89947491 | MsG0180005303.01.T01:CDS |
| TTGCATCACGCTTGCAAACT+GGG | 0.424562 | 1:+89944600 | None:intergenic |
| GCGTGATGCAAGAACGGGTC+TGG | 0.427986 | 1:-89944588 | MsG0180005303.01.T01:CDS |
| GCCGTAGCTCTGTGGATCTT+AGG | 0.428506 | 1:-89944346 | MsG0180005303.01.T01:CDS |
| TAACTATACTTTGAAAATCA+AGG | 0.436326 | 1:+89943774 | None:intergenic |
| GTGTGCTATGGCGGCTGCTA+AGG | 0.439742 | 1:-89947505 | MsG0180005303.01.T01:CDS |
| GTGTGAAGCTAGAGATCTTT+GGG | 0.442142 | 1:+89944316 | None:intergenic |
| ACTGTTGAAGTTAGATGATA+AGG | 0.442928 | 1:+89943615 | None:intergenic |
| ATAGACTGACGGTCATCATT+TGG | 0.445069 | 1:+89944009 | None:intergenic |
| TTTGTTGAGTTTGTGTGCTA+TGG | 0.453295 | 1:-89947517 | MsG0180005303.01.T01:CDS |
| AAGAGGATGCCGCAGATGAC+GGG | 0.460435 | 1:+89944522 | None:intergenic |
| CTTACAATCAGCCTTCTCTA+AGG | 0.462445 | 1:-89944400 | MsG0180005303.01.T01:CDS |
| TGCCTTGAAGATTATTGCGC+TGG | 0.467679 | 1:-89945485 | MsG0180005303.01.T01:CDS |
| AGAGCTACGGCTGAAGCTTA+GGG | 0.468094 | 1:+89944358 | None:intergenic |
| AATTGAACAATTCAACATTC+CGG | 0.470205 | 1:+89944104 | None:intergenic |
| GGAGGGAATGTCGATGGGTA+TGG | 0.470908 | 1:+89943984 | None:intergenic |
| ACGCTTGCAAACTGGGCAAA+AGG | 0.471145 | 1:+89944607 | None:intergenic |
| AAACTTACTGAAGCATTGCT+TGG | 0.472660 | 1:+89944215 | None:intergenic |
| TGCAAGCGTGATGCAAGAAC+GGG | 0.474555 | 1:-89944593 | MsG0180005303.01.T01:CDS |
| TTGAGGCTGACTCACTATAT+CGG | 0.477494 | 1:+89944159 | None:intergenic |
| GTCAAAGGTTCTGGAGAATA+CGG | 0.481854 | 1:-89946657 | MsG0180005303.01.T01:CDS |
| GTTCAATGACTCGGCAATCA+CGG | 0.495171 | 1:+89944042 | None:intergenic |
| ACTGAAGCATTGCTTGGACT+TGG | 0.496274 | 1:+89944221 | None:intergenic |
| TTCAATGACTCGGCAATCAC+GGG | 0.501128 | 1:+89944043 | None:intergenic |
| CGAACATGAGAAGAAGTTTG+AGG | 0.503157 | 1:+89945608 | None:intergenic |
| CGCTCATTAGTTCAATGACT+CGG | 0.503715 | 1:+89944033 | None:intergenic |
| GTAGCTTTGAGGAAAAGGTT+AGG | 0.503932 | 1:-89946527 | MsG0180005303.01.T01:CDS |
| ACGGCTGAAGCTTAGGGAGG+GGG | 0.504414 | 1:+89944364 | None:intergenic |
| TCAACATTCCGGAAGGGAGT+TGG | 0.506625 | 1:+89944115 | None:intergenic |
| CCTCTAACCATCAAAACAAA+AGG | 0.508806 | 1:+89946555 | None:intergenic |
| GTTAGGATTGCACAAAGTGC+TGG | 0.514958 | 1:-89946510 | MsG0180005303.01.T01:CDS |
| ATGAATTCACCGCGTTCCAT+CGG | 0.515963 | 1:-89944293 | MsG0180005303.01.T01:CDS |
| AATGCTTCAGTAAGTTTCCT+CGG | 0.522483 | 1:-89944209 | MsG0180005303.01.T01:CDS |
| ATGAGATTATGTGATACTCT+TGG | 0.523072 | 1:-89943656 | MsG0180005303.01.T01:three_prime_UTR |
| AGGGAGTTGGCAGACGCAAA+TGG | 0.523123 | 1:+89944128 | None:intergenic |
| CAATGAAGATGGTGGCATCC+TGG | 0.526957 | 1:-89946463 | MsG0180005303.01.T01:CDS |
| CCTCTTTCGTGTCTTCTATG+AGG | 0.529305 | 1:-89944505 | MsG0180005303.01.T01:CDS |
| AAAGAGGATGCCGCAGATGA+CGG | 0.530793 | 1:+89944521 | None:intergenic |
| GGAAGACTTACTGTGACAGC+AGG | 0.533020 | 1:+89945442 | None:intergenic |
| AGGAGACACAAAACAGAAGG+AGG | 0.533663 | 1:+89943966 | None:intergenic |
| TTGCAAGCGTGATGCAAGAA+CGG | 0.539276 | 1:-89944594 | MsG0180005303.01.T01:CDS |
| TACGGCTGAAGCTTAGGGAG+GGG | 0.539291 | 1:+89944363 | None:intergenic |
| ATACACTGGTTTAACTAATG+TGG | 0.540905 | 1:-89945765 | MsG0180005303.01.T01:CDS |
| TCCTAAGATCCACAGAGCTA+CGG | 0.545254 | 1:+89944345 | None:intergenic |
| AAACTCAGCATGGTCTATCA+TGG | 0.545970 | 1:-89945717 | MsG0180005303.01.T01:CDS |
| AAGAAAACAGAGAGCATCAA+AGG | 0.548255 | 1:-89947732 | MsG0180005303.01.T01:five_prime_UTR |
| AATATATGTACAAATTCGGT+GGG | 0.551101 | 1:-89943582 | MsG0180005303.01.T01:three_prime_UTR |
| ATTGCGCTGGAGAGAAACTC+AGG | 0.554269 | 1:-89945472 | MsG0180005303.01.T01:CDS |
| TTAGAGAAGGCTGATTGTAA+GGG | 0.554606 | 1:+89944402 | None:intergenic |
| TCAGTGGCAGGAAATTCTGC+TGG | 0.554718 | 1:-89945842 | MsG0180005303.01.T01:intron |
| ATTTCAGCTCCATCGGTCAA+AGG | 0.556014 | 1:-89946672 | MsG0180005303.01.T01:intron |
| TAATATATGTACAAATTCGG+TGG | 0.557205 | 1:-89943583 | MsG0180005303.01.T01:three_prime_UTR |
| ATATGATTGAGATGTCTTTG+CGG | 0.558850 | 1:-89944071 | MsG0180005303.01.T01:three_prime_UTR |
| GTCATCAACCCCGTCATCTG+CGG | 0.562171 | 1:-89944531 | MsG0180005303.01.T01:CDS |
| GCTGCTAACAAGAGAAATGT+TGG | 0.562365 | 1:-89943747 | MsG0180005303.01.T01:three_prime_UTR |
| GAGTTAAGAGATGATAAAGA+TGG | 0.565530 | 1:+89944266 | None:intergenic |
| GAACAATTCAACATTCCGGA+AGG | 0.572328 | 1:+89944108 | None:intergenic |
| CACTGCAGACATAGCTAACA+GGG | 0.573295 | 1:+89945679 | None:intergenic |
| TCTCCAGAACCTTTGACCGA+TGG | 0.573751 | 1:+89946663 | None:intergenic |
| ACAGAAGGAGGGAATGTCGA+TGG | 0.576650 | 1:+89943978 | None:intergenic |
| GCAATAATCTTCAAGGCAGA+TGG | 0.580122 | 1:+89945490 | None:intergenic |
| GTTGAGTTTGTGTGCTATGG+CGG | 0.580366 | 1:-89947514 | MsG0180005303.01.T01:CDS |
| AGCATCAAAGGAATAGAACA+AGG | 0.586048 | 1:-89947720 | MsG0180005303.01.T01:five_prime_UTR |
| TGATAAAGATGGATAACCGA+TGG | 0.589393 | 1:+89944277 | None:intergenic |
| CCTCATAGAAGACACGAAAG+AGG | 0.590401 | 1:+89944505 | None:intergenic |
| AGATAGATAGATATGTATGT+TGG | 0.595258 | 1:-89943538 | MsG0180005303.01.T01:three_prime_UTR |
| ATTGTCTATGACAATGAAGA+TGG | 0.598093 | 1:-89946474 | MsG0180005303.01.T01:CDS |
| AATCATCCAAAGAGAAATTG+GGG | 0.599598 | 1:+89947622 | None:intergenic |
| AAGCTTCAGCCGTAGCTCTG+TGG | 0.606819 | 1:-89944354 | MsG0180005303.01.T01:CDS |
| GGTTGATGACAGCAGAGGTG+TGG | 0.607896 | 1:+89944544 | None:intergenic |
| GGCATCGCATACGAAGAGAA+AGG | 0.608323 | 1:-89945631 | MsG0180005303.01.T01:CDS |
| GTTTAACTAATGTGGAAACA+TGG | 0.611755 | 1:-89945757 | MsG0180005303.01.T01:CDS |
| AACAATTCAACATTCCGGAA+GGG | 0.612915 | 1:+89944109 | None:intergenic |
| AAGGGGTACTTGCTAAAGAG+TGG | 0.614377 | 1:+89944420 | None:intergenic |
| AGAGGATGCCGCAGATGACG+GGG | 0.616002 | 1:+89944523 | None:intergenic |
| GCTACGGCTGAAGCTTAGGG+AGG | 0.617291 | 1:+89944361 | None:intergenic |
| AGAGTTTCATGCTGCCTGTG+TGG | 0.623183 | 1:-89944654 | MsG0180005303.01.T01:CDS |
| CAGAGGAGACACAAAACAGA+AGG | 0.623406 | 1:+89943963 | None:intergenic |
| CAGAAGGAGGGAATGTCGAT+GGG | 0.625784 | 1:+89943979 | None:intergenic |
| AGTTCTGTACATGCATCAAG+AGG | 0.627860 | 1:+89946615 | None:intergenic |
| GGAGACACAAAACAGAAGGA+GGG | 0.627881 | 1:+89943967 | None:intergenic |
| CTACGGCTGAAGCTTAGGGA+GGG | 0.629238 | 1:+89944362 | None:intergenic |
| TGACGGTAGGACCTTAGAGA+AGG | 0.630058 | 1:+89944389 | None:intergenic |
| CTTGGACTTGGAATGTGTGA+AGG | 0.631090 | 1:+89944233 | None:intergenic |
| GAAATACTAAAGAAATACAC+TGG | 0.632691 | 1:-89945779 | MsG0180005303.01.T01:CDS |
| TGCTGGTATAAGAATACATG+CGG | 0.638072 | 1:-89945825 | MsG0180005303.01.T01:CDS |
| TAGAGAAGGCTGATTGTAAG+GGG | 0.638407 | 1:+89944403 | None:intergenic |
| GGTGTGGATTCTGAAGGTGG+TGG | 0.642431 | 1:+89944560 | None:intergenic |
| CTCTTCGTATGCGATGCCTG+CGG | 0.646212 | 1:+89945636 | None:intergenic |
| ATTGGTCATTACTTGCAACC+AGG | 0.654527 | 1:+89946445 | None:intergenic |
| GATGGATAACCGATGGAACG+CGG | 0.656285 | 1:+89944284 | None:intergenic |
| CGCAAATGGTGAGAAGCTTG+AGG | 0.656667 | 1:+89944142 | None:intergenic |
| ATGTACACCAGATGCCAACA+AGG | 0.658962 | 1:+89943929 | None:intergenic |
| AATCAAAGCGTAAAACACAC+TGG | 0.667954 | 1:+89943815 | None:intergenic |
| AGAGGTGTGGATTCTGAAGG+TGG | 0.668803 | 1:+89944557 | None:intergenic |
| CGAGTCATTGAACTAATGAG+CGG | 0.677812 | 1:-89944032 | MsG0180005303.01.T01:three_prime_UTR |
| GAAGACTTACTGTGACAGCA+GGG | 0.683669 | 1:+89945443 | None:intergenic |
| GACGGGGTTGATGACAGCAG+AGG | 0.693540 | 1:+89944539 | None:intergenic |
| AGCAGAGGTGTGGATTCTGA+AGG | 0.694144 | 1:+89944554 | None:intergenic |
| ACAAGGAAGTCATTTGCCAG+AGG | 0.695574 | 1:+89943946 | None:intergenic |
| TGGGTATGGACATAGACTGA+CGG | 0.695823 | 1:+89943998 | None:intergenic |
| GCATCAAAGGAATAGAACAA+GGG | 0.703114 | 1:-89947719 | MsG0180005303.01.T01:five_prime_UTR |
| CCTGCGGACGAAGAAACAAG+TGG | 0.703165 | 1:+89945652 | None:intergenic |
| GTCTATGACAATGAAGATGG+TGG | 0.704480 | 1:-89946471 | MsG0180005303.01.T01:CDS |
| GCTGACTCACTATATCGGAG+TGG | 0.710724 | 1:+89944164 | None:intergenic |
| GCTGATGACTGGATGAACCG+AGG | 0.715695 | 1:+89944192 | None:intergenic |
| CAAAGCGTAAAACACACTGG+TGG | 0.737621 | 1:+89943818 | None:intergenic |
| TTACGAGAAACAGATTGCGA+CGG | 0.739626 | 1:+89944443 | None:intergenic |
| AGTAAGCCAAGAATCCACAC+AGG | 0.748693 | 1:+89944640 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATAATCAAATGATTT+TGG | + | Chr1:89946278-89946297 | None:intergenic | 10.0% |
| !! | CAATAATATATGTACAAATT+CGG | - | Chr1:89947720-89947739 | MsG0180005303.01.T01:five_prime_UTR | 15.0% |
| !! | GATAAATTATAATTTCTGAT+TGG | - | Chr1:89945428-89945447 | MsG0180005303.01.T01:intron | 15.0% |
| !! | TTTAATCACAAAAATAAATC+CGG | + | Chr1:89944468-89944487 | None:intergenic | 15.0% |
| !!! | ATTGTTATGTCTTTTTTTTA+TGG | + | Chr1:89945111-89945130 | None:intergenic | 15.0% |
| !!! | TTTTTATCCTATATTGTATT+TGG | + | Chr1:89945286-89945305 | None:intergenic | 15.0% |
| !! | AAATTATAATTTCTGATTGG+TGG | - | Chr1:89945431-89945450 | MsG0180005303.01.T01:intron | 20.0% |
| !! | AATACACTGAATTTGAAAAA+GGG | + | Chr1:89945905-89945924 | None:intergenic | 20.0% |
| !! | ACTTATATTAGGTAACATTA+TGG | - | Chr1:89944214-89944233 | MsG0180005303.01.T01:CDS | 20.0% |
| !! | CGAATTTGTACATATATTAT+TGG | + | Chr1:89947722-89947741 | None:intergenic | 20.0% |
| !! | CTTTCTTTATTAGATAGAAT+AGG | + | Chr1:89944026-89944045 | None:intergenic | 20.0% |
| !! | GCAATAATGTAAAATCTATA+AGG | - | Chr1:89945317-89945336 | MsG0180005303.01.T01:intron | 20.0% |
| !! | TAGGATAAAAAATTGAAACT+TGG | - | Chr1:89945295-89945314 | MsG0180005303.01.T01:intron | 20.0% |
| !! | TGATAATCCAAATACAATAT+AGG | - | Chr1:89945276-89945295 | MsG0180005303.01.T01:intron | 20.0% |
| !! | TTCATTATTACAATATCTCT+TGG | - | Chr1:89945184-89945203 | MsG0180005303.01.T01:intron | 20.0% |
| !! | TTTGAAAAAGGGAAAAAAAT+TGG | + | Chr1:89945894-89945913 | None:intergenic | 20.0% |
| !!! | AAATAATTTCTATTCTGAGA+CGG | - | Chr1:89946179-89946198 | MsG0180005303.01.T01:intron | 20.0% |
| !!! | ATTAAATTTGTGCTTTGTTT+GGG | - | Chr1:89944482-89944501 | MsG0180005303.01.T01:CDS | 20.0% |
| !!! | TAACTATACTTTGAAAATCA+AGG | + | Chr1:89947535-89947554 | None:intergenic | 20.0% |
| !!! | TGAAATTATTTTACAGAAGT+TGG | - | Chr1:89945153-89945172 | MsG0180005303.01.T01:intron | 20.0% |
| !!! | TGAATAGGATTTTGATTTTA+TGG | - | Chr1:89943939-89943958 | MsG0180005303.01.T01:three_prime_UTR | 20.0% |
| !!! | TTCTAATTCAATTTTTTTCC+TGG | - | Chr1:89946617-89946636 | MsG0180005303.01.T01:CDS | 20.0% |
| ! | AAAAGGGAAAAAAATTGGAA+TGG | + | Chr1:89945889-89945908 | None:intergenic | 25.0% |
| ! | AAAATCATCCAAAGAGAAAT+TGG | + | Chr1:89943689-89943708 | None:intergenic | 25.0% |
| ! | AAAGGGAAAAAAATTGGAAT+GGG | + | Chr1:89945888-89945907 | None:intergenic | 25.0% |
| ! | AAATCATCCAAAGAGAAATT+GGG | + | Chr1:89943688-89943707 | None:intergenic | 25.0% |
| ! | AATATATGTACAAATTCGGT+GGG | - | Chr1:89947724-89947743 | MsG0180005303.01.T01:five_prime_UTR | 25.0% |
| ! | AATTGAACAATTCAACATTC+CGG | + | Chr1:89947205-89947224 | None:intergenic | 25.0% |
| ! | AATTTATCAGAATATGACTC+AGG | + | Chr1:89945416-89945435 | None:intergenic | 25.0% |
| ! | ACAAAGAAAAACAAGAAACT+AGG | + | Chr1:89946473-89946492 | None:intergenic | 25.0% |
| ! | ACATAATCTCATCATTCAAT+TGG | + | Chr1:89947642-89947661 | None:intergenic | 25.0% |
| ! | AGATAGATAGATATGTATGT+TGG | - | Chr1:89947768-89947787 | MsG0180005303.01.T01:five_prime_UTR | 25.0% |
| ! | ATAATATTGTGACAGCAAAA+TGG | + | Chr1:89943540-89943559 | None:intergenic | 25.0% |
| ! | ATGTACTAGTAACTTCAAAA+CGG | + | Chr1:89946563-89946582 | None:intergenic | 25.0% |
| ! | ATGTTGCTACATAAAACAAT+TGG | + | Chr1:89944882-89944901 | None:intergenic | 25.0% |
| ! | CAATACACTGAATTTGAAAA+AGG | + | Chr1:89945906-89945925 | None:intergenic | 25.0% |
| ! | CACAGTTCAAACAAATTAAA+TGG | + | Chr1:89946353-89946372 | None:intergenic | 25.0% |
| ! | GAAATACTAAAGAAATACAC+TGG | - | Chr1:89945527-89945546 | MsG0180005303.01.T01:CDS | 25.0% |
| ! | GATGATATTGAAGCTAATTT+CGG | - | Chr1:89943859-89943878 | MsG0180005303.01.T01:three_prime_UTR | 25.0% |
| ! | TAATATATGTACAAATTCGG+TGG | - | Chr1:89947723-89947742 | MsG0180005303.01.T01:five_prime_UTR | 25.0% |
| ! | TAATATTGTGACAGCAAAAT+GGG | + | Chr1:89943539-89943558 | None:intergenic | 25.0% |
| ! | TACTGTGTGCAATTTATTAT+TGG | - | Chr1:89945958-89945977 | MsG0180005303.01.T01:intron | 25.0% |
| ! | TATAAATGCCAGTTATTATC+TGG | - | Chr1:89946050-89946069 | MsG0180005303.01.T01:intron | 25.0% |
| ! | TATAGTATTGCATTTGATTG+TGG | - | Chr1:89944561-89944580 | MsG0180005303.01.T01:CDS | 25.0% |
| ! | TATATTCCGGAATTTATCTT+AGG | + | Chr1:89944423-89944442 | None:intergenic | 25.0% |
| ! | TGTGCAATTTATTATTGGAT+TGG | - | Chr1:89945963-89945982 | MsG0180005303.01.T01:intron | 25.0% |
| ! | TTATTACAATATCTCTTGGA+AGG | - | Chr1:89945188-89945207 | MsG0180005303.01.T01:intron | 25.0% |
| ! | TTCTATTCAATTGCTTTGAT+GGG | - | Chr1:89943736-89943755 | MsG0180005303.01.T01:three_prime_UTR | 25.0% |
| ! | TTCTTTACATGTGATGATTA+TGG | - | Chr1:89947423-89947442 | MsG0180005303.01.T01:intron | 25.0% |
| ! | TTGGTTGTTGTACTTATATT+AGG | - | Chr1:89944203-89944222 | MsG0180005303.01.T01:CDS | 25.0% |
| ! | TTTATGGAATTTGTGACTAT+TGG | - | Chr1:89943955-89943974 | MsG0180005303.01.T01:three_prime_UTR | 25.0% |
| ! | TTTCAAATTCAGTGTATTGT+TGG | - | Chr1:89945907-89945926 | MsG0180005303.01.T01:intron | 25.0% |
| ! | TTTCTATTCAATTGCTTTGA+TGG | - | Chr1:89943735-89943754 | MsG0180005303.01.T01:three_prime_UTR | 25.0% |
| !! | AAGTATATGCTTTAAGTCTA+TGG | + | Chr1:89944394-89944413 | None:intergenic | 25.0% |
| !! | GATTAAATTTGTGCTTTGTT+TGG | - | Chr1:89944481-89944500 | MsG0180005303.01.T01:CDS | 25.0% |
| !! | TCTAGAATATAACTATAGAG+AGG | + | Chr1:89944328-89944347 | None:intergenic | 25.0% |
| !! | TCTCTTTTTGTTAACATGAA+TGG | - | Chr1:89944605-89944624 | MsG0180005303.01.T01:CDS | 25.0% |
| !! | TTATGGTTCTTACATTTTTC+AGG | - | Chr1:89947440-89947459 | MsG0180005303.01.T01:intron | 25.0% |
| !!! | AATTGGGGATTTTGAAAATT+AGG | + | Chr1:89943672-89943691 | None:intergenic | 25.0% |
| !!! | ATTGGGGATTTTGAAAATTA+GGG | + | Chr1:89943671-89943690 | None:intergenic | 25.0% |
| !!! | CATTTAATTTGTTTGAACTG+TGG | - | Chr1:89946351-89946370 | MsG0180005303.01.T01:intron | 25.0% |
| !!! | GATTTTGAAAATTAGGGTTT+CGG | + | Chr1:89943665-89943684 | None:intergenic | 25.0% |
| !!! | TTAAATTTGTGCTTTGTTTG+GGG | - | Chr1:89944483-89944502 | MsG0180005303.01.T01:CDS | 25.0% |
| !!! | TTTGATTTTTACTTCTGCTT+TGG | - | Chr1:89945766-89945785 | MsG0180005303.01.T01:CDS | 25.0% |
| AAAAAATGCTGACCAAAAAC+AGG | - | Chr1:89946298-89946317 | MsG0180005303.01.T01:intron | 30.0% | |
| AAAAGGATTTGAATTGATGC+TGG | - | Chr1:89944062-89944081 | MsG0180005303.01.T01:three_prime_UTR | 30.0% | |
| AAAGTTAACACCAATGTGTA+AGG | + | Chr1:89946019-89946038 | None:intergenic | 30.0% | |
| AATATGTCAACAAACAGTTG+AGG | - | Chr1:89944085-89944104 | MsG0180005303.01.T01:three_prime_UTR | 30.0% | |
| AATCATCCAAAGAGAAATTG+GGG | + | Chr1:89943687-89943706 | None:intergenic | 30.0% | |
| AATTTGTGTTTCCTTTGTGA+TGG | - | Chr1:89944347-89944366 | MsG0180005303.01.T01:CDS | 30.0% | |
| ACAATAAAACCAAAGAGACA+TGG | + | Chr1:89946133-89946152 | None:intergenic | 30.0% | |
| ACTATTGGAAATTCTTACAC+TGG | - | Chr1:89943970-89943989 | MsG0180005303.01.T01:three_prime_UTR | 30.0% | |
| ACTGTTGAAGTTAGATGATA+AGG | + | Chr1:89947694-89947713 | None:intergenic | 30.0% | |
| AGAAAAACAAGAAACTAGGA+AGG | + | Chr1:89946469-89946488 | None:intergenic | 30.0% | |
| ATAAATCCGGAATTTCTCTT+AGG | + | Chr1:89944455-89944474 | None:intergenic | 30.0% | |
| ATATGATTGAGATGTCTTTG+CGG | - | Chr1:89947235-89947254 | MsG0180005303.01.T01:intron | 30.0% | |
| ATGAGATTATGTGATACTCT+TGG | - | Chr1:89947650-89947669 | MsG0180005303.01.T01:five_prime_UTR | 30.0% | |
| ATTGTCTATGACAATGAAGA+TGG | - | Chr1:89944832-89944851 | MsG0180005303.01.T01:intron | 30.0% | |
| GAAAAAGAAAGAGAGAGAAA+AGG | - | Chr1:89944045-89944064 | MsG0180005303.01.T01:three_prime_UTR | 30.0% | |
| GAAATCAATCCAACAAGAAA+TGG | + | Chr1:89945353-89945372 | None:intergenic | 30.0% | |
| GACTAAACTGATGATATACT+GGG | + | Chr1:89946418-89946437 | None:intergenic | 30.0% | |
| GAGTTAAGAGATGATAAAGA+TGG | + | Chr1:89947043-89947062 | None:intergenic | 30.0% | |
| GCAGAAGTAAAAATCAAACT+TGG | + | Chr1:89945764-89945783 | None:intergenic | 30.0% | |
| GGAATGTTGAATTGTTCAAT+TGG | - | Chr1:89947204-89947223 | MsG0180005303.01.T01:intron | 30.0% | |
| GGTATTTGTTTCAAAAGCTT+CGG | - | Chr1:89945502-89945521 | MsG0180005303.01.T01:CDS | 30.0% | |
| GTATTTGTTTCAAAAGCTTC+GGG | - | Chr1:89945503-89945522 | MsG0180005303.01.T01:CDS | 30.0% | |
| GTTTAACTAATGTGGAAACA+TGG | - | Chr1:89945549-89945568 | MsG0180005303.01.T01:CDS | 30.0% | |
| TCAACAAAGAGAAGAAAAAG+AGG | + | Chr1:89943777-89943796 | None:intergenic | 30.0% | |
| TCATCTTCAGCAATACAAAT+TGG | - | Chr1:89946836-89946855 | MsG0180005303.01.T01:intron | 30.0% | |
| TCATGTTAACAAAAAGAGAC+AGG | + | Chr1:89944604-89944623 | None:intergenic | 30.0% | |
| TGTACTAGTAACTTCAAAAC+GGG | + | Chr1:89946562-89946581 | None:intergenic | 30.0% | |
| ! | AGCACGAAAGATTAGATTTT+TGG | + | Chr1:89943715-89943734 | None:intergenic | 30.0% |
| ! | GCAAAAACGTTTCTAGATAA+TGG | + | Chr1:89945035-89945054 | None:intergenic | 30.0% |
| ! | TGATTTCAGCTAGTTTGAAT+AGG | - | Chr1:89943924-89943943 | MsG0180005303.01.T01:three_prime_UTR | 30.0% |
| !! | ATACACTGGTTTAACTAATG+TGG | - | Chr1:89945541-89945560 | MsG0180005303.01.T01:CDS | 30.0% |
| !!! | CTTTTGTTTTGATGGTTAGA+GGG | - | Chr1:89944752-89944771 | MsG0180005303.01.T01:intron | 30.0% |
| !!! | TAGTTCACCTTTTGTTTTGA+TGG | - | Chr1:89944744-89944763 | MsG0180005303.01.T01:intron | 30.0% |
| !!! | TGGTGGTTTTTTAATTTCAG+TGG | - | Chr1:89945448-89945467 | MsG0180005303.01.T01:intron | 30.0% |
| !!! | TTGTTTTTTGCCTTCGAATT+TGG | - | Chr1:89943888-89943907 | MsG0180005303.01.T01:three_prime_UTR | 30.0% |
| !!! | TTTTGTTTTGATGGTTAGAG+GGG | - | Chr1:89944753-89944772 | MsG0180005303.01.T01:intron | 30.0% |
| AAATGCTAATGTGAGTTGTC+TGG | - | Chr1:89944963-89944982 | MsG0180005303.01.T01:intron | 35.0% | |
| AACAATTCAACATTCCGGAA+GGG | + | Chr1:89947200-89947219 | None:intergenic | 35.0% | |
| AACACAGAATCCAAATTCGA+AGG | + | Chr1:89943901-89943920 | None:intergenic | 35.0% | |
| AATGCTTCAGTAAGTTTCCT+CGG | - | Chr1:89947097-89947116 | MsG0180005303.01.T01:intron | 35.0% | |
| AGCATCAAAGGAATAGAACA+AGG | - | Chr1:89943586-89943605 | MsG0180005303.01.T01:three_prime_UTR | 35.0% | |
| ATGAGAATGTCTTTGTCATG+AGG | - | Chr1:89946076-89946095 | MsG0180005303.01.T01:intron | 35.0% | |
| CAAAATCCCCAATTTCTCTT+TGG | - | Chr1:89943678-89943697 | MsG0180005303.01.T01:three_prime_UTR | 35.0% | |
| CAACAAGAAATGGTCATCAT+TGG | + | Chr1:89945343-89945362 | None:intergenic | 35.0% | |
| CAATGATGACCATTTCTTGT+TGG | - | Chr1:89945341-89945360 | MsG0180005303.01.T01:intron | 35.0% | |
| CATATGAAAGCCTTACACAT+TGG | - | Chr1:89946006-89946025 | MsG0180005303.01.T01:intron | 35.0% | |
| CCTCTAACCATCAAAACAAA+AGG | + | Chr1:89944754-89944773 | None:intergenic | 35.0% | |
| CTCATTTGCCAGATAATAAC+TGG | + | Chr1:89946061-89946080 | None:intergenic | 35.0% | |
| CTCTCGTATTGTTAAAGACA+AGG | + | Chr1:89946388-89946407 | None:intergenic | 35.0% | |
| CTCTTGGAAGGAAAATATCA+GGG | - | Chr1:89945200-89945219 | MsG0180005303.01.T01:intron | 35.0% | |
| GAAACAACATATCAATAGCC+AGG | + | Chr1:89946517-89946536 | None:intergenic | 35.0% | |
| GCATCAAAGGAATAGAACAA+GGG | - | Chr1:89943587-89943606 | MsG0180005303.01.T01:three_prime_UTR | 35.0% | |
| GCCATTCCTAAGATAAATTC+CGG | - | Chr1:89944414-89944433 | MsG0180005303.01.T01:CDS | 35.0% | |
| GCTTTCATATGTCTCAACAA+AGG | + | Chr1:89945997-89946016 | None:intergenic | 35.0% | |
| GGACTAAACTGATGATATAC+TGG | + | Chr1:89946419-89946438 | None:intergenic | 35.0% | |
| GTGCATATTGAACAACATTC+TGG | - | Chr1:89945240-89945259 | MsG0180005303.01.T01:intron | 35.0% | |
| TAGGAATGGCAAGTATATTC+CGG | + | Chr1:89944436-89944455 | None:intergenic | 35.0% | |
| TCCGGAATTTATCTTAGGAA+TGG | + | Chr1:89944418-89944437 | None:intergenic | 35.0% | |
| TCTCATGTTCGTGAATTTCA+TGG | - | Chr1:89945710-89945729 | MsG0180005303.01.T01:CDS | 35.0% | |
| TCTCTTGGAAGGAAAATATC+AGG | - | Chr1:89945199-89945218 | MsG0180005303.01.T01:intron | 35.0% | |
| TGATAAAGATGGATAACCGA+TGG | + | Chr1:89947032-89947051 | None:intergenic | 35.0% | |
| TGCTGGTATAAGAATACATG+CGG | - | Chr1:89945481-89945500 | MsG0180005303.01.T01:CDS | 35.0% | |
| TTAGAGAAGGCTGATTGTAA+GGG | + | Chr1:89946907-89946926 | None:intergenic | 35.0% | |
| TTCATCAGGGATAAAGGTAA+TGG | + | Chr1:89946440-89946459 | None:intergenic | 35.0% | |
| TTTGTTGAGTTTGTGTGCTA+TGG | - | Chr1:89943789-89943808 | MsG0180005303.01.T01:three_prime_UTR | 35.0% | |
| ! | CATGCTGAGTTTTCAAAAGT+TGG | + | Chr1:89945581-89945600 | None:intergenic | 35.0% |
| !! | AAACTTACTGAAGCATTGCT+TGG | + | Chr1:89947094-89947113 | None:intergenic | 35.0% |
| !! | AAAGTTTTATCCCGGTAAGT+GGG | + | Chr1:89944185-89944204 | None:intergenic | 35.0% |
| !! | AAGAAAACAGAGAGCATCAA+AGG | - | Chr1:89943574-89943593 | MsG0180005303.01.T01:three_prime_UTR | 35.0% |
| !! | CAACAACCAAAGTTTTATCC+CGG | + | Chr1:89944193-89944212 | None:intergenic | 35.0% |
| !! | CAACTTTTGAAAACTCAGCA+TGG | - | Chr1:89945579-89945598 | MsG0180005303.01.T01:CDS | 35.0% |
| !! | GGGAACATTCATTTTTGACA+TGG | - | Chr1:89943607-89943626 | MsG0180005303.01.T01:three_prime_UTR | 35.0% |
| !! | TCTTACACTGGTAGTGTTTT+TGG | - | Chr1:89943982-89944001 | MsG0180005303.01.T01:three_prime_UTR | 35.0% |
| !!! | CCTTTTGTTTTGATGGTTAG+AGG | - | Chr1:89944751-89944770 | MsG0180005303.01.T01:intron | 35.0% |
| !!! | GGTTCTTACATTTTTCAGGT+TGG | - | Chr1:89947444-89947463 | MsG0180005303.01.T01:intron | 35.0% |
| !!! | GGTTTTTTAATTTCAGTGGC+AGG | - | Chr1:89945452-89945471 | MsG0180005303.01.T01:intron | 35.0% |
| !!! | TTTGTTTTGATGGTTAGAGG+GGG | - | Chr1:89944754-89944773 | MsG0180005303.01.T01:intron | 35.0% |
| AAACTCAGCATGGTCTATCA+TGG | - | Chr1:89945589-89945608 | MsG0180005303.01.T01:CDS | 40.0% | |
| AAATGGAACACGAGTGTACT+AGG | + | Chr1:89946336-89946355 | None:intergenic | 40.0% | |
| AACAACATTCTGGACAAGCT+TGG | - | Chr1:89945250-89945269 | MsG0180005303.01.T01:intron | 40.0% | |
| AGTTCTGTACATGCATCAAG+AGG | + | Chr1:89944694-89944713 | None:intergenic | 40.0% | |
| ATAGACTGACGGTCATCATT+TGG | + | Chr1:89947300-89947319 | None:intergenic | 40.0% | |
| ATTGGTCATTACTTGCAACC+AGG | + | Chr1:89944864-89944883 | None:intergenic | 40.0% | |
| CACTTACCGGGATAAAACTT+TGG | - | Chr1:89944184-89944203 | MsG0180005303.01.T01:CDS | 40.0% | |
| CCTCATTTCATCAGGGATAA+AGG | + | Chr1:89946446-89946465 | None:intergenic | 40.0% | |
| CCTTTATCCCTGATGAAATG+AGG | - | Chr1:89946443-89946462 | MsG0180005303.01.T01:intron | 40.0% | |
| CGAACATGAGAAGAAGTTTG+AGG | + | Chr1:89945701-89945720 | None:intergenic | 40.0% | |
| CGAGTCATTGAACTAATGAG+CGG | - | Chr1:89947274-89947293 | MsG0180005303.01.T01:intron | 40.0% | |
| CGCTCATTAGTTCAATGACT+CGG | + | Chr1:89947276-89947295 | None:intergenic | 40.0% | |
| CTTACAATCAGCCTTCTCTA+AGG | - | Chr1:89946906-89946925 | MsG0180005303.01.T01:intron | 40.0% | |
| CTTAGAGAAGGCTGATTGTA+AGG | + | Chr1:89946908-89946927 | None:intergenic | 40.0% | |
| GAAAAAGAGGCAAAGATTCG+AGG | + | Chr1:89943764-89943783 | None:intergenic | 40.0% | |
| GAACAATTCAACATTCCGGA+AGG | + | Chr1:89947201-89947220 | None:intergenic | 40.0% | |
| GCAATAATCTTCAAGGCAGA+TGG | + | Chr1:89945819-89945838 | None:intergenic | 40.0% | |
| GCCATTCCTAAGAGAAATTC+CGG | - | Chr1:89944446-89944465 | MsG0180005303.01.T01:CDS | 40.0% | |
| GCTGCTAACAAGAGAAATGT+TGG | - | Chr1:89947559-89947578 | MsG0180005303.01.T01:exon | 40.0% | |
| GTCTATGACAATGAAGATGG+TGG | - | Chr1:89944835-89944854 | MsG0180005303.01.T01:intron | 40.0% | |
| GTGTGAAGCTAGAGATCTTT+GGG | + | Chr1:89946993-89947012 | None:intergenic | 40.0% | |
| TAAAACCAAAGAGACATGGC+CGG | + | Chr1:89946129-89946148 | None:intergenic | 40.0% | |
| TACTTACCGGGATAAGACTT+TGG | - | Chr1:89944263-89944282 | MsG0180005303.01.T01:CDS | 40.0% | |
| TAGAGAAGGCTGATTGTAAG+GGG | + | Chr1:89946906-89946925 | None:intergenic | 40.0% | |
| TCCGGAATTTCTCTTAGGAA+TGG | + | Chr1:89944450-89944469 | None:intergenic | 40.0% | |
| TGGATTCTTGGCTTACTTCA+TGG | - | Chr1:89946672-89946691 | MsG0180005303.01.T01:intron | 40.0% | |
| TGTGTGAAGCTAGAGATCTT+TGG | + | Chr1:89946994-89947013 | None:intergenic | 40.0% | |
| TGTTTCCTTTGTGATGGTTG+TGG | - | Chr1:89944353-89944372 | MsG0180005303.01.T01:CDS | 40.0% | |
| TTACGAGAAACAGATTGCGA+CGG | + | Chr1:89946866-89946885 | None:intergenic | 40.0% | |
| ! | AAAGTCTTATCCCGGTAAGT+AGG | + | Chr1:89944264-89944283 | None:intergenic | 40.0% |
| ! | AAGTCTTATCCCGGTAAGTA+GGG | + | Chr1:89944263-89944282 | None:intergenic | 40.0% |
| ! | ACCAAAAACAGGTTTGCTTG+AGG | - | Chr1:89946309-89946328 | MsG0180005303.01.T01:intron | 40.0% |
| ! | CAACAACCAAAGTCTTATCC+CGG | + | Chr1:89944272-89944291 | None:intergenic | 40.0% |
| ! | TCCTCAAGCAAACCTGTTTT+TGG | + | Chr1:89946313-89946332 | None:intergenic | 40.0% |
| ! | TTGAGGCTGACTCACTATAT+CGG | + | Chr1:89947150-89947169 | None:intergenic | 40.0% |
| !! | AAGTTTTATCCCGGTAAGTG+GGG | + | Chr1:89944184-89944203 | None:intergenic | 40.0% |
| !! | AGAATACGGAGCCTTATTCT+TGG | - | Chr1:89944663-89944682 | MsG0180005303.01.T01:intron | 40.0% |
| !! | CAAAGTTTTATCCCGGTAAG+TGG | + | Chr1:89944186-89944205 | None:intergenic | 40.0% |
| !! | CTGCTAAGGTTGTGTTGATT+GGG | - | Chr1:89943815-89943834 | MsG0180005303.01.T01:three_prime_UTR | 40.0% |
| !! | GTAGCTTTGAGGAAAAGGTT+AGG | - | Chr1:89944779-89944798 | MsG0180005303.01.T01:intron | 40.0% |
| !! | GTCAAAGGTTCTGGAGAATA+CGG | - | Chr1:89944649-89944668 | MsG0180005303.01.T01:CDS | 40.0% |
| !! | TGCTTTGTTTGGGGAAAAGA+TGG | - | Chr1:89944492-89944511 | MsG0180005303.01.T01:CDS | 40.0% |
| !!! | GCTTTTGATTTCAGCTCCAT+CGG | - | Chr1:89944627-89944646 | MsG0180005303.01.T01:CDS | 40.0% |
| !!! | TTGTTTTGATGGTTAGAGGG+GGG | - | Chr1:89944755-89944774 | MsG0180005303.01.T01:intron | 40.0% |
| AACTCTGTCAATAAGTCGCC+AGG | + | Chr1:89946638-89946657 | None:intergenic | 45.0% | |
| AAGAGGCTCTGCCAAGAATA+AGG | + | Chr1:89944677-89944696 | None:intergenic | 45.0% | |
| ACAAGGAAGTCATTTGCCAG+AGG | + | Chr1:89947363-89947382 | None:intergenic | 45.0% | |
| AGGAAGGCCTCATTTCATCA+GGG | + | Chr1:89946453-89946472 | None:intergenic | 45.0% | |
| AGGAGACACAAAACAGAAGG+AGG | + | Chr1:89947343-89947362 | None:intergenic | 45.0% | |
| AGTAAGCCAAGAATCCACAC+AGG | + | Chr1:89946669-89946688 | None:intergenic | 45.0% | |
| ATGAATTCACCGCGTTCCAT+CGG | - | Chr1:89947013-89947032 | MsG0180005303.01.T01:intron | 45.0% | |
| ATGACTTCCTTGTTGGCATC+TGG | - | Chr1:89947370-89947389 | MsG0180005303.01.T01:intron | 45.0% | |
| ATGTACACCAGATGCCAACA+AGG | + | Chr1:89947380-89947399 | None:intergenic | 45.0% | |
| ATTTCAGCTCCATCGGTCAA+AGG | - | Chr1:89944634-89944653 | MsG0180005303.01.T01:CDS | 45.0% | |
| CAAAGCGTAAAACACACTGG+TGG | + | Chr1:89947491-89947510 | None:intergenic | 45.0% | |
| CACTGCAGACATAGCTAACA+GGG | + | Chr1:89945630-89945649 | None:intergenic | 45.0% | |
| CAGAGGAGACACAAAACAGA+AGG | + | Chr1:89947346-89947365 | None:intergenic | 45.0% | |
| CCTCATAGAAGACACGAAAG+AGG | + | Chr1:89946804-89946823 | None:intergenic | 45.0% | |
| CCTCTTTCGTGTCTTCTATG+AGG | - | Chr1:89946801-89946820 | MsG0180005303.01.T01:intron | 45.0% | |
| CTCCAGCGCAATAATCTTCA+AGG | + | Chr1:89945826-89945845 | None:intergenic | 45.0% | |
| CTGGCAAATGACTTCCTTGT+TGG | - | Chr1:89947363-89947382 | MsG0180005303.01.T01:intron | 45.0% | |
| CTTGGACTTGGAATGTGTGA+AGG | + | Chr1:89947076-89947095 | None:intergenic | 45.0% | |
| CTTTGTCATGAGGCAGGTTA+TGG | - | Chr1:89946086-89946105 | MsG0180005303.01.T01:intron | 45.0% | |
| GAAGACTTACTGTGACAGCA+GGG | + | Chr1:89945866-89945885 | None:intergenic | 45.0% | |
| GAATGTCTTTGTCATGAGGC+AGG | - | Chr1:89946080-89946099 | MsG0180005303.01.T01:intron | 45.0% | |
| GAGTTGTCTGGTACACTAAC+TGG | - | Chr1:89944975-89944994 | MsG0180005303.01.T01:intron | 45.0% | |
| GGAGACACAAAACAGAAGGA+GGG | + | Chr1:89947342-89947361 | None:intergenic | 45.0% | |
| GTTAGGATTGCACAAAGTGC+TGG | - | Chr1:89944796-89944815 | MsG0180005303.01.T01:intron | 45.0% | |
| GTTGAGTTTGTGTGCTATGG+CGG | - | Chr1:89943792-89943811 | MsG0180005303.01.T01:three_prime_UTR | 45.0% | |
| TAGGAAGGCCTCATTTCATC+AGG | + | Chr1:89946454-89946473 | None:intergenic | 45.0% | |
| TCCTAAGATCCACAGAGCTA+CGG | + | Chr1:89946964-89946983 | None:intergenic | 45.0% | |
| TCTGGTACACTAACTGGTTG+TGG | - | Chr1:89944981-89945000 | MsG0180005303.01.T01:intron | 45.0% | |
| TGCCTTGAAGATTATTGCGC+TGG | - | Chr1:89945821-89945840 | MsG0180005303.01.T01:CDS | 45.0% | |
| TGGGTATGGACATAGACTGA+CGG | + | Chr1:89947311-89947330 | None:intergenic | 45.0% | |
| TTCCTTTGTGATGGTTGTGG+TGG | - | Chr1:89944356-89944375 | MsG0180005303.01.T01:CDS | 45.0% | |
| TTGCAAGCGTGATGCAAGAA+CGG | - | Chr1:89946712-89946731 | MsG0180005303.01.T01:intron | 45.0% | |
| TTGCATCACGCTTGCAAACT+GGG | + | Chr1:89946709-89946728 | None:intergenic | 45.0% | |
| ! | CTTCTGTTTTGTGTCTCCTC+TGG | - | Chr1:89947344-89947363 | MsG0180005303.01.T01:intron | 45.0% |
| ! | GCTGCTAAGGTTGTGTTGAT+TGG | - | Chr1:89943814-89943833 | MsG0180005303.01.T01:three_prime_UTR | 45.0% |
| ! | GTTCAATGACTCGGCAATCA+CGG | + | Chr1:89947267-89947286 | None:intergenic | 45.0% |
| ! | TTCAATGACTCGGCAATCAC+GGG | + | Chr1:89947266-89947285 | None:intergenic | 45.0% |
| !! | AAGGGGTACTTGCTAAAGAG+TGG | + | Chr1:89946889-89946908 | None:intergenic | 45.0% |
| !! | ACTGAAGCATTGCTTGGACT+TGG | + | Chr1:89947088-89947107 | None:intergenic | 45.0% |
| !! | CAGGGTTCTAGCTTAGTATG+TGG | - | Chr1:89945218-89945237 | MsG0180005303.01.T01:intron | 45.0% |
| !! | CAGGTTATGGCTATTTTCCC+AGG | - | Chr1:89946099-89946118 | MsG0180005303.01.T01:intron | 45.0% |
| !! | CGATTTTGCTATACGCTTCC+TGG | - | Chr1:89946496-89946515 | MsG0180005303.01.T01:CDS | 45.0% |
| !! | GGCTATTTTCCCAGGATTTC+CGG | - | Chr1:89946107-89946126 | MsG0180005303.01.T01:intron | 45.0% |
| !!! | TGGTAGTGTTTTTGGCACAC+TGG | - | Chr1:89943990-89944009 | MsG0180005303.01.T01:three_prime_UTR | 45.0% |
| !! | AATTATTTAAAAAAAATTCA+TGG | + | Chr1:89946167-89946186 | None:intergenic | 5.0% |
| AAAGAGGATGCCGCAGATGA+CGG | + | Chr1:89946788-89946807 | None:intergenic | 50.0% | |
| ACAGAAGGAGGGAATGTCGA+TGG | + | Chr1:89947331-89947350 | None:intergenic | 50.0% | |
| ACGCTTGCAAACTGGGCAAA+AGG | + | Chr1:89946702-89946721 | None:intergenic | 50.0% | |
| AGAGCTACGGCTGAAGCTTA+GGG | + | Chr1:89946951-89946970 | None:intergenic | 50.0% | |
| AGAGTTTCATGCTGCCTGTG+TGG | - | Chr1:89946652-89946671 | MsG0180005303.01.T01:CDS | 50.0% | |
| ATGCTGCCTGTGTGGATTCT+TGG | - | Chr1:89946660-89946679 | MsG0180005303.01.T01:CDS | 50.0% | |
| ATGTAGCCGACCCTACTTAC+CGG | - | Chr1:89944250-89944269 | MsG0180005303.01.T01:CDS | 50.0% | |
| ATTGCGCTGGAGAGAAACTC+AGG | - | Chr1:89945834-89945853 | MsG0180005303.01.T01:CDS | 50.0% | |
| CAGAAGGAGGGAATGTCGAT+GGG | + | Chr1:89947330-89947349 | None:intergenic | 50.0% | |
| CAGTTGAGGCATGCAAAGCA+TGG | - | Chr1:89944099-89944118 | MsG0180005303.01.T01:exon | 50.0% | |
| CGCAAATGGTGAGAAGCTTG+AGG | + | Chr1:89947167-89947186 | None:intergenic | 50.0% | |
| CTTATCCCGGTAAGTAGGGT+CGG | + | Chr1:89944259-89944278 | None:intergenic | 50.0% | |
| CTTGCATCACGCTTGCAAAC+TGG | + | Chr1:89946710-89946729 | None:intergenic | 50.0% | |
| GATGGATAACCGATGGAACG+CGG | + | Chr1:89947025-89947044 | None:intergenic | 50.0% | |
| GATTTCCGGCCATGTCTCTT+TGG | - | Chr1:89946121-89946140 | MsG0180005303.01.T01:intron | 50.0% | |
| GCACTGCAGACATAGCTAAC+AGG | + | Chr1:89945631-89945650 | None:intergenic | 50.0% | |
| GGAAGACTTACTGTGACAGC+AGG | + | Chr1:89945867-89945886 | None:intergenic | 50.0% | |
| GGCATCGCATACGAAGAGAA+AGG | - | Chr1:89945675-89945694 | MsG0180005303.01.T01:CDS | 50.0% | |
| GTTAGCTATGTCTGCAGTGC+TGG | - | Chr1:89945631-89945650 | MsG0180005303.01.T01:CDS | 50.0% | |
| TCAACATTCCGGAAGGGAGT+TGG | + | Chr1:89947194-89947213 | None:intergenic | 50.0% | |
| TCAGTGGCAGGAAATTCTGC+TGG | - | Chr1:89945464-89945483 | MsG0180005303.01.T01:CDS | 50.0% | |
| TCTCCAGAACCTTTGACCGA+TGG | + | Chr1:89944646-89944665 | None:intergenic | 50.0% | |
| TGACGGTAGGACCTTAGAGA+AGG | + | Chr1:89946920-89946939 | None:intergenic | 50.0% | |
| TGCAAGCGTGATGCAAGAAC+GGG | - | Chr1:89946713-89946732 | MsG0180005303.01.T01:intron | 50.0% | |
| TTTATCCCGGTAAGTGGGGT+CGG | + | Chr1:89944180-89944199 | None:intergenic | 50.0% | |
| ! | AGAGGTGTGGATTCTGAAGG+TGG | + | Chr1:89946752-89946771 | None:intergenic | 50.0% |
| ! | AGCAGAGGTGTGGATTCTGA+AGG | + | Chr1:89946755-89946774 | None:intergenic | 50.0% |
| ! | CAATGAAGATGGTGGCATCC+TGG | - | Chr1:89944843-89944862 | MsG0180005303.01.T01:intron | 50.0% |
| ! | GCTGACTCACTATATCGGAG+TGG | + | Chr1:89947145-89947164 | None:intergenic | 50.0% |
| !! | GGGGTGTAGCTTTGAGGAAA+AGG | - | Chr1:89944774-89944793 | MsG0180005303.01.T01:intron | 50.0% |
| AAGAGGATGCCGCAGATGAC+GGG | + | Chr1:89946787-89946806 | None:intergenic | 55.0% | |
| AGAGACATGGCCGGAAATCC+TGG | + | Chr1:89946120-89946139 | None:intergenic | 55.0% | |
| AGCTTAGGGAGGGGGATTGA+CGG | + | Chr1:89946937-89946956 | None:intergenic | 55.0% | |
| AGGGAGTTGGCAGACGCAAA+TGG | + | Chr1:89947181-89947200 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAC+CGG | - | Chr1:89944171-89944190 | MsG0180005303.01.T01:CDS | 55.0% | |
| CAGAGCTACGGCTGAAGCTT+AGG | + | Chr1:89946952-89946971 | None:intergenic | 55.0% | |
| CCTGCGGACGAAGAAACAAG+TGG | + | Chr1:89945657-89945676 | None:intergenic | 55.0% | |
| CGCCACCACAACCATCACAA+AGG | + | Chr1:89944361-89944380 | None:intergenic | 55.0% | |
| CTACGGCTGAAGCTTAGGGA+GGG | + | Chr1:89946947-89946966 | None:intergenic | 55.0% | |
| CTCTTCGTATGCGATGCCTG+CGG | + | Chr1:89945673-89945692 | None:intergenic | 55.0% | |
| GAGACATGGCCGGAAATCCT+GGG | + | Chr1:89946119-89946138 | None:intergenic | 55.0% | |
| GAGTGGATGCTGCTGATGAC+TGG | + | Chr1:89947128-89947147 | None:intergenic | 55.0% | |
| GCTCCATCGGTCAAAGGTTC+TGG | - | Chr1:89944640-89944659 | MsG0180005303.01.T01:CDS | 55.0% | |
| GCTGATGACTGGATGAACCG+AGG | + | Chr1:89947117-89947136 | None:intergenic | 55.0% | |
| GGAGGGAATGTCGATGGGTA+TGG | + | Chr1:89947325-89947344 | None:intergenic | 55.0% | |
| GGTAAGTAGGGTCGGCTACA+TGG | + | Chr1:89944251-89944270 | None:intergenic | 55.0% | |
| GTCATCAACCCCGTCATCTG+CGG | - | Chr1:89946775-89946794 | MsG0180005303.01.T01:intron | 55.0% | |
| TACGGCTGAAGCTTAGGGAG+GGG | + | Chr1:89946946-89946965 | None:intergenic | 55.0% | |
| TGTAGCCGACCCTACTTACC+GGG | - | Chr1:89944251-89944270 | MsG0180005303.01.T01:CDS | 55.0% | |
| ! | AAGCTTCAGCCGTAGCTCTG+TGG | - | Chr1:89946952-89946971 | MsG0180005303.01.T01:intron | 55.0% |
| ! | CCACTTGTTTCTTCGTCCGC+AGG | - | Chr1:89945654-89945673 | MsG0180005303.01.T01:CDS | 55.0% |
| ! | GCCGTAGCTCTGTGGATCTT+AGG | - | Chr1:89946960-89946979 | MsG0180005303.01.T01:intron | 55.0% |
| ! | GGTGTGGATTCTGAAGGTGG+TGG | + | Chr1:89946749-89946768 | None:intergenic | 55.0% |
| ! | TAGAGGGGGGTGTAGCTTTG+AGG | - | Chr1:89944768-89944787 | MsG0180005303.01.T01:intron | 55.0% |
| !! | GGTTGATGACAGCAGAGGTG+TGG | + | Chr1:89946765-89946784 | None:intergenic | 55.0% |
| ACGGCTGAAGCTTAGGGAGG+GGG | + | Chr1:89946945-89946964 | None:intergenic | 60.0% | |
| AGAGGATGCCGCAGATGACG+GGG | + | Chr1:89946786-89946805 | None:intergenic | 60.0% | |
| GCGTGATGCAAGAACGGGTC+TGG | - | Chr1:89946718-89946737 | MsG0180005303.01.T01:intron | 60.0% | |
| GCTACGGCTGAAGCTTAGGG+AGG | + | Chr1:89946948-89946967 | None:intergenic | 60.0% | |
| GGTAAGTGGGGTCGGCTACA+TGG | + | Chr1:89944172-89944191 | None:intergenic | 60.0% | |
| GTGTGCTATGGCGGCTGCTA+AGG | - | Chr1:89943801-89943820 | MsG0180005303.01.T01:three_prime_UTR | 60.0% | |
| TAGGGAGGGGGATTGACGGT+AGG | + | Chr1:89946933-89946952 | None:intergenic | 60.0% | |
| TGCGTCTGCCAACTCCCTTC+CGG | - | Chr1:89947183-89947202 | MsG0180005303.01.T01:intron | 60.0% | |
| TGTAGCCGACCCCACTTACC+GGG | - | Chr1:89944172-89944191 | MsG0180005303.01.T01:CDS | 60.0% | |
| !! | GACGGGGTTGATGACAGCAG+AGG | + | Chr1:89946770-89946789 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 89943513 | 89947815 | 89943513 | ID=MsG0180005303.01;Name=MsG0180005303.01 |
| Chr1 | mRNA | 89943513 | 89947815 | 89943513 | ID=MsG0180005303.01.T01;Parent=MsG0180005303.01;Name=MsG0180005303.01.T01;_AED=0.29;_eAED=0.29;_QI=241|1|1|1|1|1|4|602|441 |
| Chr1 | exon | 89943513 | 89944674 | 89943513 | ID=MsG0180005303.01.T01:exon:47866;Parent=MsG0180005303.01.T01 |
| Chr1 | exon | 89945453 | 89945860 | 89945453 | ID=MsG0180005303.01.T01:exon:47865;Parent=MsG0180005303.01.T01 |
| Chr1 | exon | 89946457 | 89946687 | 89946457 | ID=MsG0180005303.01.T01:exon:47864;Parent=MsG0180005303.01.T01 |
| Chr1 | exon | 89947448 | 89947815 | 89947448 | ID=MsG0180005303.01.T01:exon:47863;Parent=MsG0180005303.01.T01 |
| Chr1 | five_prime_UTR | 89947575 | 89947815 | 89947575 | ID=MsG0180005303.01.T01:five_prime_utr;Parent=MsG0180005303.01.T01 |
| Chr1 | CDS | 89947448 | 89947574 | 89947448 | ID=MsG0180005303.01.T01:cds;Parent=MsG0180005303.01.T01 |
| Chr1 | CDS | 89946457 | 89946687 | 89946457 | ID=MsG0180005303.01.T01:cds;Parent=MsG0180005303.01.T01 |
| Chr1 | CDS | 89945453 | 89945860 | 89945453 | ID=MsG0180005303.01.T01:cds;Parent=MsG0180005303.01.T01 |
| Chr1 | CDS | 89944115 | 89944674 | 89944115 | ID=MsG0180005303.01.T01:cds;Parent=MsG0180005303.01.T01 |
| Chr1 | three_prime_UTR | 89943513 | 89944114 | 89943513 | ID=MsG0180005303.01.T01:three_prime_utr;Parent=MsG0180005303.01.T01 |
| Gene Sequence |
| Protein sequence |
