AlfalfaGEDB | MsG0180006025.01

M. sativa cultivar ZhongmuNo.1 / MsG0180006025.01

KEGG: -
GO: GO:0030145 GO:0045735
PFAM: PF00190

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180006025.01.T01	XP_013470283.1	98.095	210	4	0	1	210	1	210	3.13E-147	418

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180006025.01.T01	Q9SR72	60.194	206	70	3	13	209	19	221	1.53E-85	255

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180006025.01.T01	A0A072VRM6	98.095	210	4	0	1	210	1	210	1.49e-147	418

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047790.01	MsG0180006025.01	-0.806315	8.730192e-50	4.723657e-47
MsG0180000611.01	MsG0180006025.01	0.801504	8.727579e-49	4.174972e-46
MsG0180001311.01	MsG0180006025.01	0.847512	1.103213e-59	1.965595e-56
MsG0180002100.01	MsG0180006025.01	0.804904	1.726588e-49	9.010973e-47
MsG0180002317.01	MsG0180006025.01	-0.807725	4.393622e-50	2.465523e-47
MsG0180002992.01	MsG0180006025.01	0.840035	1.107828e-57	1.558689e-54
MsG0180003379.01	MsG0180006025.01	0.803714	3.055493e-49	1.546349e-46
MsG0180003807.01	MsG0180006025.01	0.800943	1.136647e-48	5.361048e-46
MsG0180003885.01	MsG0180006025.01	0.803753	2.998849e-49	1.519267e-46
MsG0180003922.01	MsG0180006025.01	0.804536	2.061137e-49	1.065370e-46
MsG0180003932.01	MsG0180006025.01	0.807495	4.916347e-50	2.742475e-47
MsG0180004160.01	MsG0180006025.01	0.813890	2.035774e-51	1.345854e-48
MsG0180004272.01	MsG0180006025.01	0.812554	3.998803e-51	2.550366e-48
MsG0180004390.01	MsG0180006025.01	0.812492	4.126218e-51	2.627325e-48
MsG0180004486.01	MsG0180006025.01	0.812656	3.798866e-51	2.429261e-48
MsG0180004493.01	MsG0180006025.01	0.820305	7.358568e-53	5.801014e-50
MsG0180004500.01	MsG0180006025.01	0.819966	8.797480e-53	6.870751e-50
MsG0180005220.01	MsG0180006025.01	0.806006	1.014163e-49	5.444593e-47
MsG0180005240.01	MsG0180006025.01	0.823322	1.474519e-53	1.265386e-50
MsG0180005303.01	MsG0180006025.01	-0.800885	1.168130e-48	5.501518e-46
MsG0180005330.01	MsG0180006025.01	-0.804934	1.702068e-49	8.889468e-47
MsG0180005429.01	MsG0180006025.01	0.804277	2.333655e-49	1.198263e-46
MsG0180005787.01	MsG0180006025.01	0.804145	2.486488e-49	1.272419e-46
MsG0180006025.01	MsG0180006096.01	0.807772	4.292449e-50	2.411703e-47
MsG0180006025.01	MsG0180006104.01	0.843721	1.177010e-58	1.857965e-55
MsG0180006025.01	MsG0280006906.01	0.803662	3.132035e-49	1.582968e-46
MsG0180006025.01	MsG0280007165.01	-0.870258	1.671961e-66	6.462432e-63
MsG0180006025.01	MsG0280007208.01	0.835405	1.710124e-56	2.089270e-53
MsG0180006025.01	MsG0280007531.01	0.801767	7.709819e-49	3.712515e-46
MsG0180006025.01	MsG0280007756.01	0.811010	8.669929e-51	5.307092e-48
MsG0180006025.01	MsG0280009270.01	0.802691	4.974756e-49	2.452660e-46
MsG0180006025.01	MsG0280010411.01	0.810608	1.059349e-50	6.414537e-48
MsG0180006025.01	MsG0280010598.01	0.805241	1.467980e-49	7.727021e-47
MsG0180006025.01	MsG0280010599.01	0.821879	3.192004e-53	2.629575e-50
MsG0180006025.01	MsG0280010916.01	0.804780	1.833023e-49	9.535245e-47
MsG0180006025.01	MsG0280011333.01	0.829368	5.353448e-55	5.468480e-52
MsG0180006025.01	MsG0280011376.01	0.819806	9.570577e-53	7.441355e-50
MsG0180006025.01	MsG0380012005.01	0.803267	3.782335e-49	1.892357e-46
MsG0180006025.01	MsG0380012160.01	0.826317	2.898756e-54	2.709149e-51
MsG0180006025.01	MsG0380012187.01	0.801014	1.099377e-48	5.194742e-46
MsG0180006025.01	MsG0380013686.01	0.812300	4.544442e-51	2.878766e-48
MsG0180006025.01	MsG0380013853.01	0.804590	2.008108e-49	1.039445e-46
MsG0180006025.01	MsG0380014706.01	0.820061	8.369019e-53	6.553737e-50
MsG0180006025.01	MsG0380015066.01	-0.818307	2.098638e-52	1.565246e-49
MsG0180006025.01	MsG0380015215.01	-0.811245	7.708225e-51	4.747226e-48
MsG0180006025.01	MsG0380015220.01	0.816302	5.930211e-52	4.186731e-49
MsG0180006025.01	MsG0380015289.01	0.835629	1.501772e-56	1.846866e-53
MsG0180006025.01	MsG0380015374.01	0.818956	1.495406e-52	1.135593e-49
MsG0180006025.01	MsG0380016118.01	-0.821777	3.370530e-53	2.768553e-50
MsG0180006025.01	MsG0380016191.01	-0.813003	3.188593e-51	2.057859e-48
MsG0180006025.01	MsG0380016347.01	-0.801654	8.129825e-49	3.903645e-46
MsG0180006025.01	MsG0380016353.01	0.838695	2.467707e-57	3.331417e-54
MsG0180006025.01	MsG0380016740.01	0.857060	2.110187e-62	5.142172e-59
MsG0180006025.01	MsG0380017085.01	0.815049	1.128033e-51	7.694620e-49
MsG0180006025.01	MsG0380017229.01	0.806846	6.747425e-50	3.700918e-47
MsG0180006025.01	MsG0380017263.01	-0.804893	1.735495e-49	9.055079e-47
MsG0180006025.01	MsG0380017265.01	-0.800637	1.312994e-48	6.144513e-46
MsG0180006025.01	MsG0380017322.01	0.817178	3.772888e-52	2.728077e-49
MsG0180006025.01	MsG0380017941.01	0.822641	2.124807e-53	1.788906e-50
MsG0180006025.01	MsG0480018292.01	0.876501	1.327735e-68	6.453126e-65
MsG0180006025.01	MsG0480018402.01	0.840573	8.015693e-58	1.146569e-54
MsG0180006025.01	MsG0480018606.01	0.808216	3.453820e-50	1.963394e-47
MsG0180006025.01	MsG0480018911.01	0.820672	6.061033e-53	4.826615e-50
MsG0180006025.01	MsG0480019148.01	0.815167	1.061814e-51	7.266042e-49
MsG0180006025.01	MsG0480019984.01	-0.811171	8.000445e-51	4.917447e-48
MsG0180006025.01	MsG0480020024.01	0.803310	3.705623e-49	1.855978e-46
MsG0180006025.01	MsG0480020719.01	0.809811	1.573395e-50	9.329857e-48
MsG0180006025.01	MsG0480021492.01	0.817548	3.114853e-52	2.275269e-49
MsG0180006025.01	MsG0480021592.01	0.834231	3.377252e-56	3.982800e-53
MsG0180006025.01	MsG0480021870.01	0.832576	8.738621e-56	9.807595e-53
MsG0180006025.01	MsG0480021876.01	-0.803460	3.449287e-49	1.734334e-46
MsG0180006025.01	MsG0480022248.01	0.804176	2.449156e-49	1.254315e-46
MsG0180006025.01	MsG0480023099.01	0.806361	8.538832e-50	4.625452e-47
MsG0180006025.01	MsG0480023377.01	0.846496	2.094686e-59	3.612325e-56
MsG0180006025.01	MsG0480023400.01	-0.816449	5.497316e-52	3.896256e-49
MsG0180006025.01	MsG0480023670.01	0.804547	2.049575e-49	1.059731e-46
MsG0180006025.01	MsG0480023776.01	0.805775	1.134534e-49	6.054679e-47
MsG0180006025.01	MsG0480023841.01	-0.800871	1.175786e-48	5.535420e-46
MsG0180006025.01	MsG0580024084.01	0.801587	8.390884e-49	4.022144e-46
MsG0180006025.01	MsG0580024157.01	0.802142	6.455827e-49	3.138553e-46
MsG0180006025.01	MsG0580025206.01	0.815469	9.097411e-52	6.278056e-49
MsG0180006025.01	MsG0580026488.01	-0.839770	1.298963e-57	1.812146e-54
MsG0180006025.01	MsG0580028459.01	0.816495	5.369501e-52	3.810458e-49
MsG0180006025.01	MsG0580029327.01	0.801831	7.478201e-49	3.607087e-46
MsG0180006025.01	MsG0580029550.01	0.814115	1.815917e-51	1.207814e-48
MsG0180006025.01	MsG0580029592.01	0.816203	6.241466e-52	4.394411e-49
MsG0180006025.01	MsG0580029879.01	0.807198	5.682444e-50	3.145361e-47
MsG0180006025.01	MsG0580029919.01	0.870210	1.733108e-66	6.686840e-63
MsG0180006025.01	MsG0580030144.01	0.811031	8.580191e-51	5.254753e-48
MsG0180006025.01	MsG0680030555.01	0.807236	5.577710e-50	3.090463e-47
MsG0180006025.01	MsG0680030992.01	0.808104	3.648139e-50	2.067669e-47
MsG0180006025.01	MsG0680031597.01	-0.823673	1.220526e-53	1.058024e-50
MsG0180006025.01	MsG0680031805.01	-0.813271	2.785218e-51	1.810541e-48
MsG0180006025.01	MsG0680032516.01	0.809696	1.665825e-50	9.847896e-48
MsG0180006025.01	MsG0680033465.01	0.838920	2.158671e-57	2.933968e-54
MsG0180006025.01	MsG0680033926.01	0.850307	1.847873e-60	3.604225e-57
MsG0180006025.01	MsG0680034235.01	0.806511	7.938779e-50	4.317003e-47
MsG0180006025.01	MsG0680034476.01	0.800428	1.447878e-48	6.740280e-46
MsG0180006025.01	MsG0780035937.01	0.823026	1.728296e-53	1.471029e-50
MsG0180006025.01	MsG0780036117.01	0.810893	9.189580e-51	5.607376e-48
MsG0180006025.01	MsG0780036880.01	0.815043	1.131679e-51	7.718471e-49
MsG0180006025.01	MsG0780037123.01	0.803372	3.597878e-49	1.804875e-46
MsG0180006025.01	MsG0780037330.01	0.800030	1.744633e-48	8.039780e-46
MsG0180006025.01	MsG0780038644.01	0.812252	4.655380e-51	2.945320e-48
MsG0180006025.01	MsG0780038907.01	0.829632	4.617264e-55	4.752547e-52
MsG0180006025.01	MsG0780039828.01	0.807362	5.245003e-50	2.915576e-47
MsG0180006025.01	MsG0780040176.01	0.825342	4.938609e-54	4.489196e-51
MsG0180006025.01	MsG0780040375.01	-0.836071	1.160129e-56	1.445966e-53
MsG0180006025.01	MsG0780040591.01	0.839659	1.388309e-57	1.930142e-54
MsG0180006025.01	MsG0780040794.01	0.822357	2.473736e-53	2.065830e-50
MsG0180006025.01	MsG0780041192.01	0.817375	3.406829e-52	2.476851e-49
MsG0180006025.01	MsG0780041258.01	0.812400	4.321158e-51	2.744846e-48
MsG0180006025.01	MsG0780041300.01	0.818320	2.084866e-52	1.555505e-49
MsG0180006025.01	MsG0780041482.01	0.815685	8.142940e-52	5.652566e-49
MsG0180006025.01	MsG0780041729.01	-0.807874	4.084589e-50	2.300910e-47
MsG0180006025.01	MsG0780041734.01	-0.836905	7.116105e-57	9.094560e-54
MsG0180006025.01	MsG0880043194.01	0.832313	1.015143e-55	1.130299e-52
MsG0180006025.01	MsG0880044389.01	-0.817190	3.750751e-52	2.712872e-49
MsG0180006025.01	MsG0880045329.01	0.822935	1.814734e-53	1.540579e-50
MsG0180006025.01	MsG0880045756.01	0.811339	7.354516e-51	4.540421e-48
MsG0180006025.01	MsG0880046289.01	-0.806176	9.338640e-50	5.035278e-47
MsG0180006025.01	MsG0880046809.01	0.839855	1.234402e-57	1.726680e-54
MsG0180006025.01	MsG0880047055.01	-0.809921	1.490059e-50	8.861162e-48
MsG0180006025.01	MsG0880047285.01	-0.834062	3.724023e-56	4.369765e-53
MsG0180006025.01	MsG0880047696.01	0.802420	5.658562e-49	2.770709e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180006025.01.T01	MTR_1g112200	98.095	210	4	0	1	210	1	210	3.79e-151	418
MsG0180006025.01.T01	MTR_1g060120	56.373	204	78	1	17	209	20	223	7.88e-82	243
MsG0180006025.01.T01	MTR_1g085500	42.381	210	114	3	7	209	7	216	3.81e-53	170
MsG0180006025.01.T01	MTR_7g111240	45.596	193	99	4	22	209	19	210	8.05e-53	169
MsG0180006025.01.T01	MTR_7g111240	44.898	196	99	4	22	209	19	213	3.24e-52	167
MsG0180006025.01.T01	MTR_1g085140	43.434	198	105	3	19	209	20	217	2.36e-51	165
MsG0180006025.01.T01	MTR_6g005330	43.721	215	105	6	7	207	3	215	1.50e-47	155
MsG0180006025.01.T01	MTR_6g005310	43.981	216	106	6	5	207	2	215	2.84e-47	155
MsG0180006025.01.T01	MTR_1g079490	44.059	202	98	6	19	207	18	217	5.01e-47	154
MsG0180006025.01.T01	MTR_6g005360	43.721	215	108	5	5	207	2	215	5.45e-47	154
MsG0180006025.01.T01	MTR_6g005340	44.700	217	103	8	5	207	2	215	6.20e-47	154
MsG0180006025.01.T01	MTR_5g046410	41.627	209	90	7	19	206	18	215	2.07e-43	145
MsG0180006025.01.T01	MTR_5g046430	41.627	209	90	7	19	206	18	215	2.07e-43	145
MsG0180006025.01.T01	MTR_4g017030	41.627	209	90	7	19	206	18	215	2.07e-43	145
MsG0180006025.01.T01	MTR_4g017050	41.546	207	93	7	19	206	18	215	2.09e-43	145
MsG0180006025.01.T01	MTR_4g017040	40.179	224	97	8	9	206	3	215	2.95e-43	145
MsG0180006025.01.T01	MTR_2g019250	41.627	209	90	7	19	206	18	215	5.23e-43	144
MsG0180006025.01.T01	MTR_1g023770	39.109	202	116	4	11	207	10	209	1.03e-42	143
MsG0180006025.01.T01	MTR_5g036570	41.753	194	105	4	22	207	26	219	1.10e-42	143
MsG0180006025.01.T01	MTR_2g030855	40.513	195	108	5	20	207	19	212	4.58e-42	141
MsG0180006025.01.T01	MTR_2g031270	40.957	188	103	5	27	207	27	213	9.61e-42	140
MsG0180006025.01.T01	MTR_6g005350	40.196	204	100	6	19	207	18	214	9.23e-38	130
MsG0180006025.01.T01	MTR_2g041580	36.946	203	119	3	9	204	3	203	2.79e-37	129
MsG0180006025.01.T01	MTR_2g041570	36.765	204	120	3	9	205	3	204	2.88e-37	129
MsG0180006025.01.T01	MTR_2g030895	41.860	172	94	4	42	207	7	178	6.04e-37	127
MsG0180006025.01.T01	MTR_2g041550	36.816	201	122	2	9	204	3	203	8.44e-37	128
MsG0180006025.01.T01	MTR_8g020590	36.058	208	115	5	10	205	1	202	1.18e-35	125
MsG0180006025.01.T01	MTR_2g030865	41.279	172	95	4	42	207	7	178	1.41e-35	124
MsG0180006025.01.T01	MTR_3g019710	34.300	207	125	5	8	207	3	205	1.09e-34	122
MsG0180006025.01.T01	MTR_8g020630	35.437	206	124	6	8	207	3	205	4.03e-34	121
MsG0180006025.01.T01	MTR_2g086640	34.286	210	112	5	12	208	8	204	1.84e-33	119
MsG0180006025.01.T01	MTR_8g020610	32.367	207	129	5	8	207	1	203	5.43e-33	118
MsG0180006025.01.T01	MTR_2g036120	33.333	207	127	5	8	207	3	205	7.08e-33	117
MsG0180006025.01.T01	MTR_6g005380	39.109	202	108	5	7	197	9	206	7.75e-33	117
MsG0180006025.01.T01	MTR_2g045100	36.517	178	106	4	33	207	32	205	8.06e-33	117
MsG0180006025.01.T01	MTR_3g019680	35.266	207	119	6	8	207	6	204	1.36e-32	117
MsG0180006025.01.T01	MTR_8g020650	37.433	187	108	6	27	207	22	205	1.48e-32	117
MsG0180006025.01.T01	MTR_3g019650	35.749	207	118	7	8	207	6	204	5.30e-32	115
MsG0180006025.01.T01	MTR_8g007300	35.294	187	113	2	22	200	25	211	1.02e-31	115
MsG0180006025.01.T01	MTR_3g096330	41.765	170	87	2	15	172	563	732	1.28e-31	121
MsG0180006025.01.T01	MTR_2g044040	32.850	207	128	5	8	207	3	205	1.46e-31	114
MsG0180006025.01.T01	MTR_8g020670	33.990	203	125	5	11	207	6	205	3.05e-31	113
MsG0180006025.01.T01	MTR_4g010340	33.163	196	122	4	16	207	11	201	3.76e-31	113
MsG0180006025.01.T01	MTR_8g020763	34.706	170	107	3	40	207	19	186	2.67e-30	110
MsG0180006025.01.T01	MTR_4g052770	33.019	212	122	5	5	208	7	206	3.15e-30	110
MsG0180006025.01.T01	MTR_8g020750	33.173	208	128	4	8	207	4	208	6.16e-30	110
MsG0180006025.01.T01	MTR_0284s0010	32.850	207	128	5	8	207	3	205	8.31e-30	110
MsG0180006025.01.T01	MTR_2g086620	31.731	208	120	5	12	208	9	205	9.65e-30	109
MsG0180006025.01.T01	MTR_2g086630	31.731	208	120	5	12	208	9	205	9.97e-30	109
MsG0180006025.01.T01	MTR_4g052780	37.500	160	96	2	53	208	47	206	2.91e-29	108
MsG0180006025.01.T01	MTR_2g031300	40.625	160	70	4	42	196	7	146	7.06e-28	103
MsG0180006025.01.T01	MTR_3g073170	34.595	185	110	5	29	207	27	206	1.18e-27	104
MsG0180006025.01.T01	MTR_7g011340	31.351	185	122	2	27	207	22	205	3.67e-27	103
MsG0180006025.01.T01	MTR_5g031460	30.435	207	133	5	8	207	3	205	7.89e-27	102
MsG0180006025.01.T01	MTR_8g020770	30.097	206	137	3	8	207	4	208	1.08e-26	102
MsG0180006025.01.T01	MTR_8g020760	32.857	210	125	8	8	207	4	207	1.13e-26	102
MsG0180006025.01.T01	MTR_2g019780	32.258	186	113	7	29	207	29	208	2.57e-24	95.9
MsG0180006025.01.T01	MTR_3g019810	28.846	208	133	5	3	204	104	302	3.52e-21	89.4
MsG0180006025.01.T01	MTR_4g027415	35.200	125	70	5	27	144	22	142	1.19e-13	65.9
MsG0180006025.01.T01	MTR_2g072560	32.759	116	68	4	8	116	3	115	3.17e-11	59.3
MsG0180006025.01.T01	MTR_3g019610	34.906	106	59	4	8	106	3	105	4.17e-11	58.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180006025.01.T01	AT3G10080	60.194	206	70	3	13	209	19	221	1.56e-86	255
MsG0180006025.01.T01	AT3G10080	60.194	206	70	3	13	209	90	292	6.08e-86	256
MsG0180006025.01.T01	AT1G02335	42.326	215	116	4	1	207	1	215	7.55e-56	177
MsG0180006025.01.T01	AT3G04200	45.070	213	104	5	8	209	14	224	1.12e-53	172
MsG0180006025.01.T01	AT1G18980	45.192	208	105	4	7	207	13	218	9.38e-53	169
MsG0180006025.01.T01	AT1G18970	42.308	208	111	4	7	207	13	218	1.09e-51	166
MsG0180006025.01.T01	AT5G26700	40.865	208	116	4	7	209	6	211	1.98e-51	165
MsG0180006025.01.T01	AT3G62020	43.204	206	109	4	12	209	12	217	2.90e-51	165
MsG0180006025.01.T01	AT5G39160	41.346	208	112	5	7	207	11	215	1.28e-50	163
MsG0180006025.01.T01	AT5G39160	40.845	213	110	6	7	207	11	219	1.48e-50	163
MsG0180006025.01.T01	AT5G39130	40.376	213	111	6	7	207	11	219	2.41e-50	163
MsG0180006025.01.T01	AT5G39190	40.845	213	110	6	7	207	11	219	2.58e-50	163
MsG0180006025.01.T01	AT1G09560	44.103	195	102	3	22	209	23	217	3.53e-50	162
MsG0180006025.01.T01	AT5G38960	44.059	202	99	5	19	207	22	222	5.20e-50	162
MsG0180006025.01.T01	AT3G05950	43.925	214	105	6	7	208	12	222	9.25e-50	162
MsG0180006025.01.T01	AT3G05930	38.710	217	125	3	1	209	1	217	8.83e-49	159
MsG0180006025.01.T01	AT5G39110	41.014	217	113	6	5	207	5	220	2.47e-48	158
MsG0180006025.01.T01	AT5G39180	40.845	213	112	5	8	207	8	219	9.31e-48	156
MsG0180006025.01.T01	AT5G38910	42.326	215	109	6	6	207	7	219	1.06e-47	156
MsG0180006025.01.T01	AT3G62020	45.699	186	95	4	28	209	5	188	1.48e-47	155
MsG0180006025.01.T01	AT5G38940	42.424	198	101	5	22	207	25	221	1.56e-47	155
MsG0180006025.01.T01	AT5G38940	42.424	198	101	5	22	207	49	245	2.17e-47	156
MsG0180006025.01.T01	AT5G39150	40.845	213	112	5	8	207	8	219	2.34e-47	155
MsG0180006025.01.T01	AT5G39120	40.639	219	113	6	5	207	2	219	5.87e-47	154
MsG0180006025.01.T01	AT5G39160	39.130	207	100	6	7	207	11	197	4.42e-45	149
MsG0180006025.01.T01	AT5G39190	39.130	207	100	6	7	207	11	197	6.53e-45	148
MsG0180006025.01.T01	AT3G04180	39.500	200	110	4	20	208	23	222	9.17e-45	149
MsG0180006025.01.T01	AT4G14630	39.500	200	107	5	21	207	24	222	1.95e-44	148
MsG0180006025.01.T01	AT3G04170	41.315	213	111	6	8	210	13	221	2.43e-44	148
MsG0180006025.01.T01	AT3G04150	39.623	212	115	5	8	208	13	222	6.22e-44	147
MsG0180006025.01.T01	AT5G38930	40.201	199	106	5	21	207	24	221	2.19e-43	145
MsG0180006025.01.T01	AT3G04190	40.299	201	107	5	20	208	23	222	2.79e-43	145
MsG0180006025.01.T01	AT3G04150	38.222	225	113	6	8	208	13	235	2.63e-42	143
MsG0180006025.01.T01	AT5G20630	38.798	183	107	2	27	204	22	204	1.62e-39	135
MsG0180006025.01.T01	AT1G10460	36.181	199	113	5	22	207	18	215	6.69e-39	133
MsG0180006025.01.T01	AT5G61750	38.983	177	101	3	9	178	5	181	2.04e-34	122
MsG0180006025.01.T01	AT1G74820	31.390	223	134	6	2	208	7	226	3.89e-33	119
MsG0180006025.01.T01	AT1G72610	36.508	189	103	3	27	204	19	201	4.37e-33	118
MsG0180006025.01.T01	AT5G38910	35.681	213	89	6	6	207	7	182	5.52e-31	112
MsG0180006025.01.T01	AT5G38950	49.206	63	30	1	138	198	2	64	3.05e-12	61.2

Find 21 sgRNAs with CRISPR-Local

Find 42 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCAGATTAAAGATGAGCTTT+TGG	0.263245	1:+99008239	MsG0180006025.01.T01:CDS
GAATTTGTTATCTTCTGATT+TGG	0.267937	1:-99007791	None:intergenic
CCAGTATCTTTGAAGTTTCC+TGG	0.322734	1:-99007874	None:intergenic
TTCTGATCCGGATCCTGTTA+TGG	0.323739	1:+99007756	MsG0180006025.01.T01:CDS
GTGAATTCAAATGTGTTTCC+AGG	0.358885	1:+99007913	MsG0180006025.01.T01:CDS
CCAGGAAACTTCAAAGATAC+TGG	0.364740	1:+99007874	MsG0180006025.01.T01:CDS
TTTGGAGAAAGGTGAGGTTA+TGG	0.393881	1:+99008095	MsG0180006025.01.T01:CDS
TGAAAATGCACAAGTCCTCT+TGG	0.414763	1:-99008123	None:intergenic
GCTATGCAGTAATCCATAAC+AGG	0.434646	1:-99007769	None:intergenic
ATAGCAACTTCTGTTGCTCT+TGG	0.444865	1:-99008009	None:intergenic
CAGTAATCCATAACAGGATC+CGG	0.469062	1:-99007763	None:intergenic
TTTCCAGGTTTAAACACTCT+TGG	0.469660	1:+99007928	MsG0180006025.01.T01:CDS
CAGCAATGATGAAACACATA+AGG	0.504374	1:-99007726	None:intergenic
ACACATAAGGACTAAAAGAA+TGG	0.521199	1:-99007713	None:intergenic
AGAAGTTGCTATTGTGTTGG+AGG	0.523101	1:+99008020	MsG0180006025.01.T01:CDS
AACAGAAGTTGCTATTGTGT+TGG	0.541553	1:+99008017	MsG0180006025.01.T01:CDS
GAAGTTGCTATTGTGTTGGA+GGG	0.567803	1:+99008021	MsG0180006025.01.T01:CDS
ACTCCAAGAGTGTTTAAACC+TGG	0.567991	1:-99007931	None:intergenic
GAAATCTTCAACTGTTGCTG+TGG	0.571728	1:-99007830	None:intergenic
AGCTTTCTAAGTTAAAGAAG+AGG	0.576087	1:+99008289	MsG0180006025.01.T01:CDS
GTTGCTCTTGGATGAAAGTG+AGG	0.618955	1:-99007997	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAAATTCCAAATGTTGTTTT+TGG	+	Chr1:99008213-99008232	MsG0180006025.01.T01:CDS	20.0%
!!	CAAGATTTTTGCTAAAGTTT+TGG	+	Chr1:99008077-99008096	MsG0180006025.01.T01:CDS	25.0%
!!!	GAATTTGTTATCTTCTGATT+TGG	-	Chr1:99007794-99007813	None:intergenic	25.0%
	AAACTACCAAAAATAGTAGC+AGG	-	Chr1:99008168-99008187	None:intergenic	30.0%
	ACACATAAGGACTAAAAGAA+TGG	-	Chr1:99007716-99007735	None:intergenic	30.0%
	AGCTTTCTAAGTTAAAGAAG+AGG	+	Chr1:99008289-99008308	MsG0180006025.01.T01:CDS	30.0%
	TGAGATCCAAAAACAACATT+TGG	-	Chr1:99008222-99008241	None:intergenic	30.0%
	TTGGAGGGAAAAATTTATTC+AGG	+	Chr1:99008036-99008055	MsG0180006025.01.T01:CDS	30.0%
!	AGATACTGGATTTTCTTCAA+TGG	+	Chr1:99007888-99007907	MsG0180006025.01.T01:CDS	30.0%
!	AGCTTTTGGACTTAATTCTA+AGG	+	Chr1:99008266-99008285	MsG0180006025.01.T01:CDS	30.0%
!	GATACTGGATTTTCTTCAAT+GGG	+	Chr1:99007889-99007908	MsG0180006025.01.T01:CDS	30.0%
!	TCAGATTAAAGATGAGCTTT+TGG	+	Chr1:99008239-99008258	MsG0180006025.01.T01:CDS	30.0%
!!	AGTTTTGATAGTCAAAATCC+TGG	+	Chr1:99008183-99008202	MsG0180006025.01.T01:CDS	30.0%
!!	TTTGGAATTTTCATCAAACC+AGG	-	Chr1:99008204-99008223	None:intergenic	30.0%
!!	TTTTCTGGTATAAAACTACC+AGG	+	Chr1:99007856-99007875	MsG0180006025.01.T01:CDS	30.0%
!!!	GTTGAAGATTTCACTTTTTC+TGG	+	Chr1:99007841-99007860	MsG0180006025.01.T01:CDS	30.0%
!!!	TTTGCTAAAGTTTTGGAGAA+AGG	+	Chr1:99008084-99008103	MsG0180006025.01.T01:CDS	30.0%
	CAGCAATGATGAAACACATA+AGG	-	Chr1:99007729-99007748	None:intergenic	35.0%
	GTGAATTCAAATGTGTTTCC+AGG	+	Chr1:99007913-99007932	MsG0180006025.01.T01:CDS	35.0%
	TTTCCAGGTTTAAACACTCT+TGG	+	Chr1:99007928-99007947	MsG0180006025.01.T01:CDS	35.0%
!	AACAGAAGTTGCTATTGTGT+TGG	+	Chr1:99008017-99008036	MsG0180006025.01.T01:CDS	35.0%
!	GATGTTCCTGCTACTATTTT+TGG	+	Chr1:99008159-99008178	MsG0180006025.01.T01:CDS	35.0%
!	GTGCATTTTCAGATGAATGT+TGG	+	Chr1:99008135-99008154	MsG0180006025.01.T01:CDS	35.0%
!!	GAGCTTTTGGAAAAAGCTTT+TGG	+	Chr1:99008252-99008271	MsG0180006025.01.T01:CDS	35.0%
!!	GTTAGAGCAGATTTTGATGT+TGG	+	Chr1:99007961-99007980	MsG0180006025.01.T01:CDS	35.0%
!!!	TAAAGTTTTGGAGAAAGGTG+AGG	+	Chr1:99008089-99008108	MsG0180006025.01.T01:CDS	35.0%
	ATAGCAACTTCTGTTGCTCT+TGG	-	Chr1:99008012-99008031	None:intergenic	40.0%
	CAGTAATCCATAACAGGATC+CGG	-	Chr1:99007766-99007785	None:intergenic	40.0%
	CCAGGAAACTTCAAAGATAC+TGG	+	Chr1:99007874-99007893	MsG0180006025.01.T01:CDS	40.0%
	GAAATCTTCAACTGTTGCTG+TGG	-	Chr1:99007833-99007852	None:intergenic	40.0%
	GCTATGCAGTAATCCATAAC+AGG	-	Chr1:99007772-99007791	None:intergenic	40.0%
	TGAAAATGCACAAGTCCTCT+TGG	-	Chr1:99008126-99008145	None:intergenic	40.0%
	TTTGGAGAAAGGTGAGGTTA+TGG	+	Chr1:99008095-99008114	MsG0180006025.01.T01:CDS	40.0%
!	AGAAGTTGCTATTGTGTTGG+AGG	+	Chr1:99008020-99008039	MsG0180006025.01.T01:CDS	40.0%
!	GAAGTTGCTATTGTGTTGGA+GGG	+	Chr1:99008021-99008040	MsG0180006025.01.T01:CDS	40.0%
!	GAGGTTATGGTTTTTCCAAG+AGG	+	Chr1:99008108-99008127	MsG0180006025.01.T01:CDS	40.0%
!!	ACTCCAAGAGTGTTTAAACC+TGG	-	Chr1:99007934-99007953	None:intergenic	40.0%
!!	AGAGCAGATTTTGATGTTGG+TGG	+	Chr1:99007964-99007983	MsG0180006025.01.T01:CDS	40.0%
!!	CCAGTATCTTTGAAGTTTCC+TGG	-	Chr1:99007877-99007896	None:intergenic	40.0%
!!!	TGCTGCTTTTTGTTCTGATC+CGG	+	Chr1:99007744-99007763	MsG0180006025.01.T01:CDS	40.0%
	GTTGCTCTTGGATGAAAGTG+AGG	-	Chr1:99008000-99008019	None:intergenic	45.0%
	TTCTGATCCGGATCCTGTTA+TGG	+	Chr1:99007756-99007775	MsG0180006025.01.T01:CDS	45.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	99007694	99008326	99007694	ID=MsG0180006025.01;Name=MsG0180006025.01
Chr1	mRNA	99007694	99008326	99007694	ID=MsG0180006025.01.T01;Parent=MsG0180006025.01;Name=MsG0180006025.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|210
Chr1	exon	99007694	99008326	99007694	ID=MsG0180006025.01.T01:exon:51014;Parent=MsG0180006025.01.T01
Chr1	CDS	99007694	99008326	99007694	ID=MsG0180006025.01.T01:cds;Parent=MsG0180006025.01.T01

Gene Sequence

>MsG0180006025.01.T01

ATGATCAACAACAAAGTAACCATTCTTTTAGTCCTTATGTGTTTCATCATTGCTGCTTTTTGTTCTGATCCGGATCCTGTTATGGATTACTGCATAGCCAAATCAGAAGATAACAAATTCAGTTGCAAAAACTCATCCACAGCAACAGTTGAAGATTTCACTTTTTCTGGTATAAAACTACCAGGAAACTTCAAAGATACTGGATTTTCTTCAATGGGAGTGAATTCAAATGTGTTTCCAGGTTTAAACACTCTTGGAGTTTCATTTGTTAGAGCAGATTTTGATGTTGGTGGTGTTAATGTTCCTCACTTTCATCCAAGAGCAACAGAAGTTGCTATTGTGTTGGAGGGAAAAATTTATTCAGGTTTTGTTGATACTAAGAACAAGATTTTTGCTAAAGTTTTGGAGAAAGGTGAGGTTATGGTTTTTCCAAGAGGACTTGTGCATTTTCAGATGAATGTTGGTGATGTTCCTGCTACTATTTTTGGTAGTTTTGATAGTCAAAATCCTGGTTTGATGAAAATTCCAAATGTTGTTTTTGGATCTCAGATTAAAGATGAGCTTTTGGAAAAAGCTTTTGGACTTAATTCTAAGGAGCTTTCTAAGTTAAAGAAGAGGTTTACTCCTAGCTAA

Protein sequence

>MsG0180006025.01.T01

MINNKVTILLVLMCFIIAAFCSDPDPVMDYCIAKSEDNKFSCKNSSTATVEDFTFSGIKLPGNFKDTGFSSMGVNSNVFPGLNTLGVSFVRADFDVGGVNVPHFHPRATEVAIVLEGKIYSGFVDTKNKIFAKVLEKGEVMVFPRGLVHFQMNVGDVPATIFGSFDSQNPGLMKIPNVVFGSQIKDELLEKAFGLNSKELSKLKKRFTPS*