AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005632.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005632.01.T01 MTR_1g104780 98.925 372 4 0 70 441 152 523 0.0 751
MsG0180005632.01.T01 MTR_1g104780 97.143 70 2 0 1 70 1 70 1.97e-37 143
MsG0180005632.01.T01 MTR_5g006070 82.574 373 61 2 70 441 152 521 0.0 633
MsG0180005632.01.T01 MTR_5g006070 64.935 77 17 1 13 79 13 89 4.52e-22 99.0
MsG0180005632.01.T01 MTR_5g006070 82.574 373 61 2 70 441 104 473 0.0 633
MsG0180005632.01.T01 MTR_1g104750 70.977 348 101 0 70 417 152 499 0.0 523
MsG0180005632.01.T01 MTR_1g104770 70.402 348 103 0 70 417 153 500 0.0 519
MsG0180005632.01.T01 MTR_1g104770 54.444 90 30 2 1 79 1 90 5.64e-21 95.5
MsG0180005632.01.T01 MTR_0204s0020 58.213 347 142 3 70 416 149 492 1.50e-151 439
MsG0180005632.01.T01 MTR_0204s0020 35.000 120 66 2 13 132 12 119 1.80e-12 69.3
MsG0180005632.01.T01 MTR_0204s0020 58.213 347 142 3 70 416 146 489 2.21e-151 439
MsG0180005632.01.T01 MTR_3g008160 56.145 358 151 5 70 425 103 456 1.41e-147 428
MsG0180005632.01.T01 MTR_3g008160 56.145 358 151 5 70 425 152 505 4.37e-147 429
MsG0180005632.01.T01 MTR_5g094760 59.012 344 138 3 70 413 155 495 5.78e-144 421
MsG0180005632.01.T01 MTR_5g094760 41.818 110 48 3 1 97 1 107 7.90e-15 76.6
MsG0180005632.01.T01 MTR_7g091690 58.140 344 141 3 70 413 155 495 8.11e-143 417
MsG0180005632.01.T01 MTR_7g091690 42.391 92 40 2 1 79 1 92 1.84e-13 72.4
MsG0180005632.01.T01 MTR_0204s0040 53.125 352 162 3 70 421 157 505 2.43e-140 411
MsG0180005632.01.T01 MTR_0204s0040 51.471 68 32 1 2 68 8 75 2.87e-14 75.1
MsG0180005632.01.T01 MTR_4g091370 58.974 351 141 2 70 418 152 501 7.64e-140 410
MsG0180005632.01.T01 MTR_4g116790 54.000 350 158 3 70 419 155 501 1.05e-139 410
MsG0180005632.01.T01 MTR_4g116790 55.556 63 26 1 3 63 6 68 5.18e-14 74.3
MsG0180005632.01.T01 MTR_5g082540 57.345 354 147 3 70 422 153 503 5.14e-139 408
MsG0180005632.01.T01 MTR_5g082540 34.028 144 85 2 7 150 8 141 2.94e-17 84.3
MsG0180005632.01.T01 MTR_4g116770 53.125 352 162 3 70 421 353 701 2.82e-137 410
MsG0180005632.01.T01 MTR_4g116770 52.239 67 31 1 2 67 204 270 2.28e-14 75.9
MsG0180005632.01.T01 MTR_3g008170 54.144 362 158 6 70 428 152 508 6.66e-137 403
MsG0180005632.01.T01 MTR_1g038600 55.372 363 153 4 70 431 135 489 1.03e-134 397
MsG0180005632.01.T01 MTR_1g038630 55.096 363 154 4 70 431 153 507 1.50e-134 397
MsG0180005632.01.T01 MTR_8g102860 53.315 362 165 4 70 430 103 461 1.75e-134 395
MsG0180005632.01.T01 MTR_8g102860 53.315 362 165 4 70 430 155 513 3.83e-134 396
MsG0180005632.01.T01 MTR_6g087040 54.416 351 156 4 70 419 155 502 6.13e-133 392
MsG0180005632.01.T01 MTR_6g087040 36.090 133 68 4 1 128 1 121 3.75e-12 68.6
MsG0180005632.01.T01 MTR_6g088375 54.416 351 156 4 70 419 155 502 6.13e-133 392
MsG0180005632.01.T01 MTR_6g088375 36.090 133 68 4 1 128 1 121 3.75e-12 68.6
MsG0180005632.01.T01 MTR_4g090600 54.830 352 156 2 70 419 152 502 5.80e-128 380
MsG0180005632.01.T01 MTR_4g090600 56.140 57 25 0 7 63 8 64 4.37e-15 77.8
MsG0180005632.01.T01 MTR_3g093010 52.473 364 168 3 70 431 152 512 1.28e-127 379
MsG0180005632.01.T01 MTR_3g093010 42.697 89 41 1 1 79 1 89 6.91e-14 73.9
MsG0180005632.01.T01 MTR_0009s0370 50.975 359 170 3 70 426 151 505 3.26e-127 378
MsG0180005632.01.T01 MTR_0009s0370 39.669 121 53 3 13 128 12 117 2.40e-13 72.4
MsG0180005632.01.T01 MTR_3g093060 53.736 348 158 2 70 415 105 451 7.15e-125 370
MsG0180005632.01.T01 MTR_5g041550 52.857 350 162 2 70 417 153 501 2.07e-124 371
MsG0180005632.01.T01 MTR_5g041550 43.333 90 40 2 1 79 1 90 2.55e-15 78.6
MsG0180005632.01.T01 MTR_3g074390 45.531 358 189 5 70 424 156 510 5.59e-119 357
MsG0180005632.01.T01 MTR_3g023480 50.284 352 172 2 70 419 151 501 1.35e-118 356
MsG0180005632.01.T01 MTR_3g023480 50.847 59 29 0 13 71 12 70 2.57e-12 68.9
MsG0180005632.01.T01 MTR_3g007910 45.564 417 195 6 14 417 71 468 3.70e-118 353
MsG0180005632.01.T01 MTR_3g074410 46.175 366 185 7 70 432 153 509 2.20e-117 353
MsG0180005632.01.T01 MTR_3g074410 48.780 82 39 1 1 79 1 82 1.07e-15 79.7
MsG0180005632.01.T01 MTR_3g074270 44.759 353 172 4 70 421 151 481 2.21e-108 329
MsG0180005632.01.T01 MTR_3g074270 37.984 129 67 3 1 128 1 117 4.96e-16 80.5
MsG0180005632.01.T01 MTR_3g074320 45.031 322 171 5 106 424 20 338 3.57e-104 313
MsG0180005632.01.T01 MTR_3g074340 45.031 322 171 5 106 424 20 338 4.74e-104 313
MsG0180005632.01.T01 MTR_3g074370 44.615 325 173 6 106 427 20 340 1.54e-103 311
MsG0180005632.01.T01 MTR_4g116790 49.528 212 106 1 70 281 155 365 4.55e-75 240
MsG0180005632.01.T01 MTR_4g116790 55.556 63 26 1 3 63 6 68 2.34e-14 74.7
MsG0180005632.01.T01 MTR_3g074380 37.026 343 136 8 16 278 20 362 1.05e-64 213
MsG0180005632.01.T01 MTR_3g074400 33.144 353 179 9 70 399 102 420 3.96e-54 186
MsG0180005632.01.T01 MTR_6g088450 32.635 334 209 6 73 394 170 499 1.94e-44 162
MsG0180005632.01.T01 MTR_4g069500 29.870 385 241 8 73 433 92 471 3.72e-44 160
MsG0180005632.01.T01 MTR_4g069500 29.870 385 241 8 73 433 142 521 6.16e-44 161
MsG0180005632.01.T01 MTR_3g116240 30.168 358 211 7 73 401 140 487 7.82e-43 158
MsG0180005632.01.T01 MTR_4g072030 29.282 362 229 7 73 414 139 493 2.73e-42 156
MsG0180005632.01.T01 MTR_2g013310 29.290 338 224 6 73 401 92 423 3.60e-42 155
MsG0180005632.01.T01 MTR_7g446340 27.624 362 243 7 73 423 167 520 8.70e-42 155
MsG0180005632.01.T01 MTR_6g007340 27.624 362 243 7 73 423 167 520 8.70e-42 155
MsG0180005632.01.T01 MTR_2g013310 29.290 338 224 6 73 401 165 496 9.08e-42 155
MsG0180005632.01.T01 MTR_1g038620 47.134 157 66 1 122 278 50 189 1.47e-41 146
MsG0180005632.01.T01 MTR_3g084110 29.014 355 241 7 73 422 143 491 2.61e-41 153
MsG0180005632.01.T01 MTR_7g005910 30.303 363 227 10 73 423 148 496 4.79e-40 150
MsG0180005632.01.T01 MTR_1g116660 29.570 372 236 10 73 437 150 502 2.52e-39 148
MsG0180005632.01.T01 MTR_8g103500 30.612 343 219 7 73 401 130 467 1.29e-38 146
MsG0180005632.01.T01 MTR_8g077310 30.330 333 220 5 72 401 61 384 3.26e-38 143
MsG0180005632.01.T01 MTR_1g116650 29.070 344 226 6 73 414 193 520 3.70e-38 145
MsG0180005632.01.T01 MTR_8g077310 30.838 334 217 6 72 401 158 481 8.40e-38 144
MsG0180005632.01.T01 MTR_5g075300 28.763 372 236 7 73 420 131 497 1.31e-37 143
MsG0180005632.01.T01 MTR_8g077890 28.800 375 238 7 73 423 131 500 7.42e-37 141
MsG0180005632.01.T01 MTR_7g113970 29.518 332 219 5 72 401 173 491 8.63e-37 141
MsG0180005632.01.T01 MTR_8g077300 30.539 334 218 5 72 401 150 473 2.10e-36 139
MsG0180005632.01.T01 MTR_1g022315 30.973 339 215 7 72 403 61 387 3.25e-36 137
MsG0180005632.01.T01 MTR_1g022315 30.973 339 215 7 72 403 160 486 1.05e-35 138
MsG0180005632.01.T01 MTR_7g113960 28.614 332 220 6 72 401 138 454 9.70e-35 135
MsG0180005632.01.T01 MTR_5g096000 51.880 133 63 1 285 417 168 299 3.84e-34 130
MsG0180005632.01.T01 MTR_5g096000 53.448 58 27 0 1 58 1 58 1.40e-12 68.6
MsG0180005632.01.T01 MTR_4g118610 30.448 335 213 7 72 401 163 482 7.52e-34 132
MsG0180005632.01.T01 MTR_5g020270 29.129 333 224 5 72 401 61 384 1.66e-33 130
MsG0180005632.01.T01 MTR_4g077740 29.060 351 221 8 70 404 161 499 2.01e-33 132
MsG0180005632.01.T01 MTR_6g018790 28.614 339 223 7 72 405 218 542 2.76e-33 132
MsG0180005632.01.T01 MTR_4g069500 29.254 335 208 8 123 433 3 332 2.85e-33 128
MsG0180005632.01.T01 MTR_7g082270 29.499 339 220 8 72 405 178 502 2.96e-33 131
MsG0180005632.01.T01 MTR_5g020270 29.129 333 224 5 72 401 161 484 4.91e-33 130
MsG0180005632.01.T01 MTR_7g094110 26.586 331 228 5 77 405 158 475 1.23e-32 129
MsG0180005632.01.T01 MTR_2g020710 29.129 333 220 7 72 401 71 390 7.16e-32 125
MsG0180005632.01.T01 MTR_2g020710 29.129 333 220 7 72 401 160 479 1.49e-31 126
MsG0180005632.01.T01 MTR_5g077580 26.531 441 220 12 71 419 139 567 2.17e-31 126
MsG0180005632.01.T01 MTR_7g094450 26.190 336 233 5 72 405 151 473 4.65e-31 124
MsG0180005632.01.T01 MTR_2g049020 33.755 237 147 5 71 300 139 372 1.63e-30 124
MsG0180005632.01.T01 MTR_3g080240 25.444 338 236 8 72 405 206 531 3.82e-30 122
MsG0180005632.01.T01 MTR_7g082270 29.537 281 184 6 72 350 178 446 8.83e-30 121
MsG0180005632.01.T01 MTR_4g013205 25.298 419 268 11 3 409 91 476 5.42e-28 116
MsG0180005632.01.T01 MTR_5g019870 27.066 351 234 7 72 401 126 475 5.95e-27 113
MsG0180005632.01.T01 MTR_2g048720 33.333 222 138 5 71 286 139 356 7.97e-27 113
MsG0180005632.01.T01 MTR_6g087910 26.801 347 218 8 9 351 117 431 9.70e-26 109
MsG0180005632.01.T01 MTR_8g077310 32.456 228 140 5 72 294 158 376 1.51e-25 108
MsG0180005632.01.T01 MTR_5g020270 27.108 332 211 7 72 401 161 463 5.94e-25 107
MsG0180005632.01.T01 MTR_1g114280 38.710 155 74 4 265 418 21 155 1.62e-24 99.8
MsG0180005632.01.T01 MTR_2g026160 30.252 238 153 6 73 300 142 376 3.39e-24 105
MsG0180005632.01.T01 MTR_7g094110 25.076 331 213 6 77 405 158 455 1.16e-23 103
MsG0180005632.01.T01 MTR_4g118610 29.699 266 167 7 72 332 163 413 1.58e-21 96.7
MsG0180005632.01.T01 MTR_2g020710 28.417 278 183 7 72 346 160 424 1.28e-20 94.0
MsG0180005632.01.T01 MTR_2g020710 28.897 263 171 7 72 331 160 409 2.38e-20 93.2
MsG0180005632.01.T01 MTR_7g113960 28.279 244 160 6 72 313 138 368 3.41e-20 92.4
MsG0180005632.01.T01 MTR_7g113970 28.455 246 163 5 72 315 173 407 1.01e-19 91.3
MsG0180005632.01.T01 MTR_2g026140 29.630 216 139 6 94 299 148 360 8.76e-19 89.4
MsG0180005632.01.T01 MTR_3g074330 39.394 132 66 3 1 127 1 123 5.19e-18 82.0
MsG0180005632.01.T01 MTR_3g074360 39.394 132 66 3 1 127 1 123 5.19e-18 82.0
MsG0180005632.01.T01 MTR_3g074310 38.636 132 67 3 1 127 1 123 2.54e-17 80.1
MsG0180005632.01.T01 MTR_4g064820 31.193 218 131 6 70 270 212 427 3.37e-17 84.0
MsG0180005632.01.T01 MTR_2g020710 29.493 217 140 6 72 285 160 366 3.48e-17 83.2
MsG0180005632.01.T01 MTR_6g006260 37.398 123 66 4 157 270 32 152 9.11e-15 73.9
MsG0180005632.01.T01 MTR_8g073100 27.953 254 154 6 159 399 462 699 1.23e-14 76.6
MsG0180005632.01.T01 MTR_3g116060 27.888 251 151 10 175 403 473 715 1.61e-14 76.3
MsG0180005632.01.T01 MTR_3g116060 34.862 109 69 2 72 179 115 222 3.14e-11 65.9
MsG0180005632.01.T01 MTR_6g006260 37.398 123 66 4 157 270 33 153 2.05e-14 73.6
MsG0180005632.01.T01 MTR_1g093115 51.667 60 28 1 79 137 1 60 2.80e-12 62.0
MsG0180005632.01.T01 MTR_5g024740 27.273 264 161 7 153 399 454 703 3.27e-12 68.9
MsG0180005632.01.T01 MTR_5g044910 27.897 233 149 5 182 403 481 705 5.11e-12 68.6
MsG0180005632.01.T01 MTR_3g118530 23.887 247 158 7 175 399 483 721 1.03e-11 67.4
MsG0180005632.01.T01 MTR_6g006260 38.384 99 56 3 174 270 1 96 1.76e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005632.01.T01 AT5G26340 76.022 367 87 1 70 436 153 518 0.0 590
MsG0180005632.01.T01 AT5G26340 62.222 90 23 2 1 79 1 90 6.16e-25 107
MsG0180005632.01.T01 AT4G02050 58.263 357 145 4 70 425 155 508 1.52e-157 456
MsG0180005632.01.T01 AT4G02050 40.217 92 42 3 1 79 1 92 1.02e-11 67.4
MsG0180005632.01.T01 AT4G02050 58.263 357 145 4 70 425 155 508 1.52e-157 456
MsG0180005632.01.T01 AT4G02050 40.217 92 42 3 1 79 1 92 1.02e-11 67.4
MsG0180005632.01.T01 AT1G77210 58.286 350 142 4 70 418 6 352 1.62e-145 419
MsG0180005632.01.T01 AT1G77210 58.286 350 142 4 70 418 155 501 1.09e-143 420
MsG0180005632.01.T01 AT1G77210 58.286 350 142 4 70 418 155 501 1.09e-143 420
MsG0180005632.01.T01 AT1G11260 56.044 364 157 2 70 431 152 514 3.10e-143 419
MsG0180005632.01.T01 AT1G11260 37.209 129 69 4 1 128 1 118 1.83e-17 85.1
MsG0180005632.01.T01 AT3G19940 51.630 368 170 4 70 436 154 514 1.51e-141 415
MsG0180005632.01.T01 AT1G50310 53.955 354 159 4 70 421 11 362 1.74e-141 409
MsG0180005632.01.T01 AT1G50310 53.571 364 160 5 70 431 154 510 4.31e-140 411
MsG0180005632.01.T01 AT3G05960 57.542 358 148 3 70 425 149 504 4.20e-137 403
MsG0180005632.01.T01 AT3G05960 55.556 54 24 0 7 60 6 59 2.01e-11 66.2
MsG0180005632.01.T01 AT5G23270 56.286 350 151 2 70 418 154 502 5.72e-137 403
MsG0180005632.01.T01 AT5G23270 35.443 158 90 3 1 156 1 148 2.84e-18 87.4
MsG0180005632.01.T01 AT5G26250 57.983 357 147 3 70 425 150 504 5.81e-136 400
MsG0180005632.01.T01 AT5G26250 43.210 81 38 1 7 79 7 87 3.14e-13 72.0
MsG0180005632.01.T01 AT4G21480 56.780 354 148 3 70 421 152 502 7.29e-133 392
MsG0180005632.01.T01 AT4G21480 35.821 134 68 5 8 139 9 126 5.49e-13 71.2
MsG0180005632.01.T01 AT3G19930 50.565 354 173 2 70 422 151 503 2.06e-126 376
MsG0180005632.01.T01 AT3G19930 34.400 125 71 3 1 124 1 115 1.08e-12 70.1
MsG0180005632.01.T01 AT3G19930 50.565 354 173 2 70 422 151 503 2.06e-126 376
MsG0180005632.01.T01 AT3G19930 34.400 125 71 3 1 124 1 115 1.08e-12 70.1
MsG0180005632.01.T01 AT1G34580 46.328 354 181 5 70 417 102 452 4.53e-114 342
MsG0180005632.01.T01 AT1G34580 46.328 354 181 5 70 417 152 502 8.15e-114 343
MsG0180005632.01.T01 AT1G34580 37.879 132 62 4 1 127 1 117 2.63e-17 84.7
MsG0180005632.01.T01 AT1G07340 50.286 350 171 2 70 418 151 498 7.69e-112 338
MsG0180005632.01.T01 AT1G07340 53.846 52 24 0 12 63 13 64 9.30e-11 64.3
MsG0180005632.01.T01 AT5G61520 46.797 359 184 5 70 426 110 463 3.43e-109 330
MsG0180005632.01.T01 AT5G61520 47.075 359 183 6 70 426 158 511 8.04e-109 331
MsG0180005632.01.T01 AT2G18480 31.445 353 215 8 73 403 134 481 1.55e-45 165
MsG0180005632.01.T01 AT2G16120 29.894 378 241 9 73 430 138 511 1.64e-43 160
MsG0180005632.01.T01 AT2G16130 30.114 352 219 6 73 401 138 485 1.65e-42 157
MsG0180005632.01.T01 AT3G18830 29.915 351 224 5 73 403 148 496 4.01e-42 156
MsG0180005632.01.T01 AT4G36670 31.818 352 212 8 73 401 129 475 5.83e-42 155
MsG0180005632.01.T01 AT2G43330 29.769 346 229 7 73 411 146 484 5.83e-41 153
MsG0180005632.01.T01 AT2G20780 28.698 338 224 6 73 401 167 496 6.78e-38 144
MsG0180005632.01.T01 AT2G20780 28.698 338 224 6 73 401 109 438 8.19e-38 143
MsG0180005632.01.T01 AT1G75220 32.047 337 209 7 72 401 159 482 1.17e-36 140
MsG0180005632.01.T01 AT2G48020 27.976 336 227 5 72 405 139 461 1.67e-36 140
MsG0180005632.01.T01 AT2G48020 27.976 336 227 5 72 405 139 461 1.67e-36 140
MsG0180005632.01.T01 AT5G59250 32.022 356 213 8 70 407 214 558 2.21e-36 140
MsG0180005632.01.T01 AT5G27350 28.614 339 227 6 72 408 142 467 1.55e-35 137
MsG0180005632.01.T01 AT3G05150 28.653 349 225 8 72 409 146 481 4.27e-35 136
MsG0180005632.01.T01 AT3G05150 29.730 333 218 7 72 401 146 465 5.04e-35 135
MsG0180005632.01.T01 AT3G05150 29.730 333 218 7 72 401 146 465 5.04e-35 135
MsG0180005632.01.T01 AT5G18840 28.824 340 226 6 72 408 155 481 6.72e-35 135
MsG0180005632.01.T01 AT5G27360 27.434 339 231 6 72 408 42 367 1.83e-34 132
MsG0180005632.01.T01 AT5G27360 27.434 339 231 6 72 408 42 367 1.83e-34 132
MsG0180005632.01.T01 AT5G27360 27.434 339 231 6 72 408 146 471 7.89e-34 132
MsG0180005632.01.T01 AT5G17010 30.303 363 201 10 70 404 163 501 1.34e-33 132
MsG0180005632.01.T01 AT5G17010 30.303 363 201 10 70 404 163 501 1.34e-33 132
MsG0180005632.01.T01 AT5G17010 30.303 363 201 10 70 404 163 501 1.34e-33 132
MsG0180005632.01.T01 AT3G05165 27.083 336 222 6 72 401 141 459 2.53e-33 131
MsG0180005632.01.T01 AT3G05165 27.083 336 222 6 72 401 141 459 2.53e-33 131
MsG0180005632.01.T01 AT3G05165 27.083 336 222 6 72 401 141 459 2.53e-33 131
MsG0180005632.01.T01 AT5G27360 27.434 339 231 6 72 408 194 519 2.60e-33 132
MsG0180005632.01.T01 AT1G05030 27.844 334 225 8 72 401 192 513 5.61e-33 130
MsG0180005632.01.T01 AT1G54730 27.596 337 227 7 72 405 143 465 5.84e-33 130
MsG0180005632.01.T01 AT1G05030 27.844 334 225 8 72 401 140 461 5.87e-33 130
MsG0180005632.01.T01 AT1G19450 29.940 334 220 6 72 401 160 483 1.17e-32 129
MsG0180005632.01.T01 AT1G08890 29.586 338 219 8 72 405 138 460 1.39e-32 129
MsG0180005632.01.T01 AT1G08930 30.655 336 210 10 72 401 169 487 2.56e-32 128
MsG0180005632.01.T01 AT1G08930 30.655 336 210 10 72 401 169 487 2.56e-32 128
MsG0180005632.01.T01 AT1G08900 30.838 334 212 6 72 401 94 412 5.18e-32 126
MsG0180005632.01.T01 AT3G03090 30.857 350 216 11 70 404 163 501 6.76e-32 127
MsG0180005632.01.T01 AT3G05400 31.454 337 206 11 72 401 117 435 7.39e-32 126
MsG0180005632.01.T01 AT3G05400 31.454 337 206 11 72 401 137 455 8.07e-32 127
MsG0180005632.01.T01 AT1G08900 30.838 334 212 6 72 401 128 446 1.02e-31 126
MsG0180005632.01.T01 AT1G08900 30.838 334 212 6 72 401 136 454 1.08e-31 126
MsG0180005632.01.T01 AT1G08900 30.838 334 212 6 72 401 136 454 1.08e-31 126
MsG0180005632.01.T01 AT3G05160 26.190 336 225 6 72 401 83 401 1.32e-31 125
MsG0180005632.01.T01 AT3G05160 26.190 336 225 6 72 401 83 401 1.32e-31 125
MsG0180005632.01.T01 AT1G30220 31.646 237 148 6 73 300 143 374 1.67e-31 127
MsG0180005632.01.T01 AT3G05160 26.190 336 225 6 72 401 132 450 2.29e-31 125
MsG0180005632.01.T01 AT5G16150 28.955 335 219 7 72 401 218 538 1.19e-30 124
MsG0180005632.01.T01 AT5G16150 28.955 335 219 7 72 401 218 538 1.19e-30 124
MsG0180005632.01.T01 AT5G16150 28.955 335 219 7 72 401 218 538 1.19e-30 124
MsG0180005632.01.T01 AT3G05155 27.381 336 225 7 72 404 138 457 6.00e-30 121
MsG0180005632.01.T01 AT1G08920 28.228 333 222 7 72 401 143 461 1.30e-29 120
MsG0180005632.01.T01 AT4G04750 26.727 333 227 6 73 401 148 467 2.32e-28 117
MsG0180005632.01.T01 AT4G04750 26.727 333 227 6 73 401 148 467 2.32e-28 117
MsG0180005632.01.T01 AT4G04760 29.341 334 218 7 73 401 84 404 2.75e-28 116
MsG0180005632.01.T01 AT4G04750 26.727 333 227 6 73 401 192 511 3.15e-28 117
MsG0180005632.01.T01 AT4G04760 29.341 334 218 7 73 401 143 463 3.79e-28 116
MsG0180005632.01.T01 AT1G54730 27.213 305 205 7 72 373 143 433 4.72e-28 115
MsG0180005632.01.T01 AT3G05165 26.129 310 206 6 72 375 141 433 4.89e-28 116
MsG0180005632.01.T01 AT1G08920 27.596 337 226 7 72 401 143 468 1.58e-27 114
MsG0180005632.01.T01 AT3G05165 28.369 282 178 7 72 346 141 405 2.47e-27 114
MsG0180005632.01.T01 AT3G05165 28.369 282 178 7 72 346 141 405 2.47e-27 114
MsG0180005632.01.T01 AT1G54730 26.488 336 211 8 72 405 143 444 3.40e-26 110
MsG0180005632.01.T01 AT1G08920 28.383 303 200 7 72 371 143 431 1.14e-25 108
MsG0180005632.01.T01 AT4G16480 32.701 211 124 5 73 270 142 347 5.87e-25 108
MsG0180005632.01.T01 AT4G16480 32.701 211 124 5 73 270 142 347 5.87e-25 108
MsG0180005632.01.T01 AT4G16480 32.701 211 124 5 73 270 142 347 5.87e-25 108
MsG0180005632.01.T01 AT2G35740 31.250 240 148 8 73 300 141 375 1.55e-24 106
MsG0180005632.01.T01 AT1G67300 25.378 331 234 6 74 401 166 486 2.21e-24 105
MsG0180005632.01.T01 AT1G08900 29.693 293 187 6 72 360 136 413 5.75e-24 103
MsG0180005632.01.T01 AT1G67300 25.510 294 202 7 74 364 166 445 1.05e-23 103
MsG0180005632.01.T01 AT1G67300 25.510 294 202 7 74 364 166 445 1.05e-23 103
MsG0180005632.01.T01 AT1G54730 27.306 271 180 7 72 339 143 399 2.10e-23 102
MsG0180005632.01.T01 AT1G54730 27.306 271 180 7 72 339 143 399 2.10e-23 102
MsG0180005632.01.T01 AT2G48020 30.488 246 154 5 72 315 139 369 2.25e-23 101
MsG0180005632.01.T01 AT1G79820 25.245 408 248 10 9 401 121 486 2.28e-23 102
MsG0180005632.01.T01 AT1G79820 25.245 408 248 10 9 401 121 486 2.28e-23 102
MsG0180005632.01.T01 AT1G67300 25.602 332 231 7 74 401 166 485 2.36e-23 102
MsG0180005632.01.T01 AT1G67300 25.602 332 231 7 74 401 166 485 2.36e-23 102
MsG0180005632.01.T01 AT1G67300 26.394 269 183 6 74 339 166 422 6.51e-23 100
MsG0180005632.01.T01 AT1G67300 26.394 269 183 6 74 339 166 422 6.51e-23 100
MsG0180005632.01.T01 AT4G04760 27.353 340 214 8 73 401 143 460 4.76e-22 98.6
MsG0180005632.01.T01 AT5G27360 27.138 269 181 6 72 338 146 401 5.48e-22 98.2
MsG0180005632.01.T01 AT1G79820 25.575 348 221 8 9 351 121 435 8.36e-22 97.8
MsG0180005632.01.T01 AT1G54730 25.987 304 189 8 72 373 143 412 1.42e-21 96.7
MsG0180005632.01.T01 AT2G48020 31.841 201 125 4 72 270 139 329 1.94e-20 92.8
MsG0180005632.01.T01 AT1G54730 28.856 201 131 4 72 270 143 333 3.13e-20 91.7
MsG0180005632.01.T01 AT1G54730 25.926 270 164 8 72 339 143 378 3.40e-17 83.6
MsG0180005632.01.T01 AT1G54730 28.000 175 117 3 72 244 143 310 4.99e-17 82.4
MsG0180005632.01.T01 AT1G54730 28.000 175 117 3 72 244 143 310 4.99e-17 82.4
MsG0180005632.01.T01 AT3G20460 22.419 339 246 6 72 407 164 488 6.54e-17 83.2
MsG0180005632.01.T01 AT3G05155 28.358 201 129 5 72 270 138 325 1.86e-16 80.5
MsG0180005632.01.T01 AT3G51490 27.126 247 145 9 178 403 436 668 6.29e-15 77.4
MsG0180005632.01.T01 AT3G51490 30.769 117 79 2 72 187 67 182 9.06e-12 67.8
MsG0180005632.01.T01 AT3G51490 27.126 247 145 9 178 403 486 718 6.46e-15 77.4
MsG0180005632.01.T01 AT3G51490 30.769 117 79 2 72 187 117 232 1.10e-11 67.4
MsG0180005632.01.T01 AT4G35300 26.000 250 156 7 175 403 473 714 8.64e-12 67.8
MsG0180005632.01.T01 AT4G35300 26.000 250 156 7 175 403 473 714 8.64e-12 67.8
MsG0180005632.01.T01 AT4G35300 26.000 250 156 7 175 403 473 714 8.64e-12 67.8
MsG0180005632.01.T01 AT4G35300 26.000 250 156 7 175 403 483 724 9.26e-12 67.8
MsG0180005632.01.T01 AT4G35300 26.000 250 156 7 175 403 483 724 9.26e-12 67.8
MsG0180005632.01.T01 AT4G35300 26.000 250 156 7 175 403 483 724 9.26e-12 67.8
MsG0180005632.01.T01 AT4G35300 26.000 250 156 7 175 403 483 724 9.26e-12 67.8
MsG0180005632.01.T01 AT4G35300 26.000 250 156 7 175 403 483 724 9.26e-12 67.8
MsG0180005632.01.T01 AT4G35300 26.000 250 156 7 175 403 483 724 9.26e-12 67.8
MsG0180005632.01.T01 AT4G35300 26.000 250 156 7 175 403 483 724 9.26e-12 67.8
MsG0180005632.01.T01 AT4G35300 26.000 250 156 7 175 403 286 527 1.04e-11 67.4
MsG0180005632.01.T01 AT3G51490 30.769 117 79 2 72 187 117 232 1.08e-11 67.4
MsG0180005632.01.T01 AT3G51490 25.417 240 150 10 178 403 486 710 4.05e-11 65.5

Find 120 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTATGATGTTGGAGTTTC+AGG 0.113291 1:+94285633 MsG0180005632.01.T01:CDS
CTTTACTCTGCTGTGATTAC+TGG 0.220334 1:+94289933 MsG0180005632.01.T01:CDS
CCAGCATTACTCCTCACTTT+AGG 0.220398 1:+94289298 MsG0180005632.01.T01:CDS
CCACGTTCAATGAGACTATT+TGG 0.243632 1:-94289343 None:intergenic
CAGCATTACTCCTCACTTTA+GGG 0.249351 1:+94289299 MsG0180005632.01.T01:CDS
AATATATTCGGTTGATAAAC+TGG 0.252057 1:+94289986 MsG0180005632.01.T01:CDS
GTCTCTCAGTTGTAAATTAG+AGG 0.270500 1:+94290530 MsG0180005632.01.T01:exon
TCCTGTAACATTGTAATGTT+TGG 0.291053 1:+94290687 MsG0180005632.01.T01:three_prime_UTR
TGTCATTTCCATTGCCCTAA+TGG 0.296156 1:+94289519 MsG0180005632.01.T01:CDS
TCCAAACATTACAATGTTAC+AGG 0.298077 1:-94290688 None:intergenic
ATGCTTTGTTATTTCAAGTT+TGG 0.300180 1:+94290305 MsG0180005632.01.T01:CDS
TGTGGAAGCAGCATTGGTTT+TGG 0.334417 1:+94290432 MsG0180005632.01.T01:CDS
CATTATCATTTCATGCATAA+TGG 0.342417 1:+94285587 MsG0180005632.01.T01:CDS
CCTCACTTTAGGGGCTTACT+TGG 0.349176 1:+94289309 MsG0180005632.01.T01:CDS
TTGGGGTTGGAGGATATCTC+TGG 0.356303 1:+94289261 MsG0180005632.01.T01:CDS
CCAGTTCTGTTCAACACATT+GGG 0.363609 1:+94289891 MsG0180005632.01.T01:CDS
GGTCATGGGGTCCACTTGCT+TGG 0.367069 1:+94290174 MsG0180005632.01.T01:CDS
ATAGGGACATTCTTTGTCTC+AGG 0.372635 1:-94290389 None:intergenic
AACGATAGTCTCAATATATT+CGG 0.386732 1:+94289974 MsG0180005632.01.T01:CDS
CTTATGTTTGGTTATGATGT+TGG 0.388237 1:+94285624 MsG0180005632.01.T01:CDS
CACGTTCAATGAGACTATTT+GGG 0.388376 1:-94289342 None:intergenic
GCCACCGGAGGTCTTATGTT+TGG 0.389666 1:+94285612 MsG0180005632.01.T01:CDS
TTTCAGCTTGATATCACTCT+TGG 0.399756 1:+94288240 MsG0180005632.01.T01:CDS
TGGAGGATATCTCTGGGATT+GGG 0.399827 1:+94289268 MsG0180005632.01.T01:CDS
TAACAGAATCAAAGGTCATT+GGG 0.402246 1:+94289243 MsG0180005632.01.T01:intron
CCCAATGTGTTGAACAGAAC+TGG 0.402584 1:-94289891 None:intergenic
GCAATCTCTGAAAGGAAAAC+TGG 0.403056 1:-94288183 None:intergenic
TTGGAGGATATCTCTGGGAT+TGG 0.417371 1:+94289267 MsG0180005632.01.T01:CDS
AACTGGAGCATAGAACATTA+TGG 0.417549 1:-94289874 None:intergenic
AATGCTCCACGTATTCTTGA+AGG 0.430135 1:-94288207 None:intergenic
ATGCATGAAATGATAATGAT+AGG 0.430983 1:-94285582 None:intergenic
AAGATTAGTACAAACCATTA+GGG 0.436585 1:-94289533 None:intergenic
TGTCAGCATTTGCATGGTCA+TGG 0.444330 1:+94290159 MsG0180005632.01.T01:CDS
TTTGTGTCATCTCTTCAATA+GGG 0.447342 1:-94290406 None:intergenic
AAAAGCTACTTTAACACAAT+GGG 0.448240 1:-94290634 None:intergenic
CCACTAGAGACTCGTTCTGC+AGG 0.462076 1:+94290218 MsG0180005632.01.T01:CDS
GGAGGCTTCAGCGGCGGCAA+CGG 0.464127 1:+94285534 MsG0180005632.01.T01:CDS
GTCAGCATTTGCATGGTCAT+GGG 0.464567 1:+94290160 MsG0180005632.01.T01:CDS
TCAAATGTTCTTGTCACAAA+TGG 0.472443 1:+94290040 MsG0180005632.01.T01:CDS
CGGCAACGGCAGAGAATTTG+AGG 0.473195 1:+94285548 MsG0180005632.01.T01:CDS
ATAACAGAATCAAAGGTCAT+TGG 0.475393 1:+94289242 MsG0180005632.01.T01:intron
TTTAGGGGCTTACTTGGTAG+TGG 0.480417 1:+94289315 MsG0180005632.01.T01:CDS
CTCTACTAACTCTAAGAACT+CGG 0.481529 1:-94289425 None:intergenic
CTGCTAGGGGAATTTCCACC+AGG 0.483891 1:-94290497 None:intergenic
CAGATATTTCAGCAATTCAC+TGG 0.497047 1:+94289843 MsG0180005632.01.T01:intron
ATAAGGAACTTACTTGTTGG+TGG 0.500032 1:-94288292 None:intergenic
GAACGTGGTCACTTGGACAA+AGG 0.500261 1:+94289358 MsG0180005632.01.T01:CDS
TCCAGTTCTGTTCAACACAT+TGG 0.500531 1:+94289890 MsG0180005632.01.T01:CDS
GGCAAGTCGTGTTGCTAAAG+AGG 0.500547 1:+94289447 MsG0180005632.01.T01:CDS
ACAATGGGAATGATAAATTC+TGG 0.503593 1:-94290619 None:intergenic
GAATCAAAGGTCATTGGGGT+TGG 0.506170 1:+94289248 MsG0180005632.01.T01:intron
TGGAAAGAACTTCTTCAAGA+AGG 0.515645 1:-94285947 None:intergenic
CCTAAAGTGAGGAGTAATGC+TGG 0.516671 1:-94289298 None:intergenic
AGACAAGATCATTTCTGCTA+GGG 0.518011 1:-94290511 None:intergenic
TCAAAGGTCATTGGGGTTGG+AGG 0.518817 1:+94289251 MsG0180005632.01.T01:CDS
CTTTCGAGAGTTCCTCAGAA+TGG 0.520137 1:-94290097 None:intergenic
CTTGAAGAAGTTCTTTCCAA+CGG 0.529312 1:+94285951 MsG0180005632.01.T01:CDS
TCTCATTGAACGTGGTCACT+TGG 0.531256 1:+94289351 MsG0180005632.01.T01:CDS
AGACAGACGACGGAATCAGA+TGG 0.534245 1:+94285979 MsG0180005632.01.T01:CDS
CATTCTTTGTCTCAGGGACA+AGG 0.534348 1:-94290382 None:intergenic
TCTAGTGGAAATATCTCACT+TGG 0.540947 1:-94290203 None:intergenic
TAATTAACCATGACGGGAGG+AGG 0.541762 1:+94285516 MsG0180005632.01.T01:exon
AAGATTTCACTGTGCGAGTG+TGG 0.543659 1:+94285465 MsG0180005632.01.T01:five_prime_UTR
TGCAGCTCTTGTAGTTGTGA+TGG 0.545486 1:+94290124 MsG0180005632.01.T01:CDS
TGGGGTTGGAGGATATCTCT+GGG 0.548277 1:+94289262 MsG0180005632.01.T01:CDS
TGAAATAACAAAGCATTGAA+AGG 0.549846 1:-94290298 None:intergenic
GGAAAGAACTTCTTCAAGAA+GGG 0.551194 1:-94285946 None:intergenic
GAGACAAGATCATTTCTGCT+AGG 0.551671 1:-94290512 None:intergenic
CACTAGAGACTCGTTCTGCA+GGG 0.555738 1:+94290219 MsG0180005632.01.T01:CDS
AGCATTACTCCTCACTTTAG+GGG 0.556506 1:+94289300 MsG0180005632.01.T01:CDS
CAAAAGCTACTTTAACACAA+TGG 0.558802 1:-94290635 None:intergenic
GTCGTCTGTCTCAAGACCGT+TGG 0.563013 1:-94285967 None:intergenic
GCTGAAGCCTCCTCCCGTCA+TGG 0.565815 1:-94285523 None:intergenic
TTGAAGGTGCAATCTCTGAA+AGG 0.568570 1:-94288191 None:intergenic
TGCATAATGGCTGCCACCGG+AGG 0.573918 1:+94285600 MsG0180005632.01.T01:CDS
GAGGTCGGTTATTGCGCTTG+AGG 0.575455 1:-94289492 None:intergenic
CGAAAGCTATTACTCGAAGC+TGG 0.575954 1:+94290014 MsG0180005632.01.T01:CDS
CTTGTAACATTGTATTGCCA+TGG 0.577763 1:+94290658 MsG0180005632.01.T01:three_prime_UTR
AGTACAAACCATTAGGGCAA+TGG 0.580130 1:-94289527 None:intergenic
ATGACGGGAGGAGGCTTCAG+CGG 0.582980 1:+94285525 MsG0180005632.01.T01:CDS
GCTGTTCTGAGAAAGATTCG+TGG 0.584754 1:+94289385 MsG0180005632.01.T01:CDS
ACGGGAGGAGGCTTCAGCGG+CGG 0.586483 1:+94285528 MsG0180005632.01.T01:CDS
GTGCAATGACAGCAGTGAAG+AGG 0.587387 1:-94290268 None:intergenic
CGCTTGAGGAGATTTCTGAA+CGG 0.588562 1:-94289478 None:intergenic
TAGGGACATTCTTTGTCTCA+GGG 0.588827 1:-94290388 None:intergenic
TCATGCATAATGGCTGCCAC+CGG 0.589627 1:+94285597 MsG0180005632.01.T01:CDS
CTAAAGTGAGGAGTAATGCT+GGG 0.591713 1:-94289297 None:intergenic
CGAGTTCTTAGAGTTAGTAG+AGG 0.593514 1:+94289426 MsG0180005632.01.T01:CDS
ATGGTGATAGCAATTGTACT+AGG 0.593741 1:+94290059 MsG0180005632.01.T01:CDS
ATTCTGAGGAACTCTCGAAA+GGG 0.594512 1:+94290099 MsG0180005632.01.T01:CDS
GACAAGATCATTTCTGCTAG+GGG 0.594712 1:-94290510 None:intergenic
CATTCTGAGGAACTCTCGAA+AGG 0.596408 1:+94290098 MsG0180005632.01.T01:CDS
GACAGACGACGGAATCAGAT+GGG 0.599473 1:+94285980 MsG0180005632.01.T01:CDS
CTCTGAAAGGAAAACTGGCA+CGG 0.599482 1:-94288178 None:intergenic
CCTGCAGAACGAGTCTCTAG+TGG 0.601195 1:-94290218 None:intergenic
TCTTTGCATAACAGAATCAA+AGG 0.602087 1:+94289235 MsG0180005632.01.T01:intron
ATATATTCGGTTGATAAACT+GGG 0.603944 1:+94289987 MsG0180005632.01.T01:CDS
ATAACCAAACATAAGACCTC+CGG 0.610933 1:-94285616 None:intergenic
TGTTGGTGGCATAGTTGACA+AGG 0.611158 1:-94288278 None:intergenic
AGGATATCTCTGGGATTGGG+AGG 0.614479 1:+94289271 MsG0180005632.01.T01:CDS
ATTGAAGATGAGAAAGTACC+TGG 0.615199 1:+94290479 MsG0180005632.01.T01:CDS
TCAGCATTTGCATGGTCATG+GGG 0.621192 1:+94290161 MsG0180005632.01.T01:CDS
CAAAGTGAAGGACCATTCTG+AGG 0.625954 1:+94290085 MsG0180005632.01.T01:CDS
GCAATGGAAATGACAAGTTG+AGG 0.629289 1:-94289511 None:intergenic
ATGTTACAGGATAATTGCCA+TGG 0.634007 1:-94290675 None:intergenic
AAGAACTTCTTCAAGAAGGG+TGG 0.634008 1:-94285943 None:intergenic
TCTGAGAAAGATTCGTGGCA+CGG 0.641034 1:+94289390 MsG0180005632.01.T01:CDS
TCTACTAACTCTAAGAACTC+GGG 0.642028 1:-94289424 None:intergenic
TGTACTAGGAATCAAAGTGA+AGG 0.642063 1:+94290073 MsG0180005632.01.T01:CDS
CCAAGTAAGCCCCTAAAGTG+AGG 0.643291 1:-94289309 None:intergenic
TGGAAATGACAAGTTGAGGT+CGG 0.646516 1:-94289507 None:intergenic
ACGTTCAATGAGACTATTTG+GGG 0.648447 1:-94289341 None:intergenic
CTTGGAATAAGCCAAGCAAG+TGG 0.653091 1:-94290185 None:intergenic
AACAGAATCAAAGGTCATTG+GGG 0.657099 1:+94289244 MsG0180005632.01.T01:intron
CCAAATAGTCTCATTGAACG+TGG 0.670098 1:+94289343 MsG0180005632.01.T01:CDS
ACCAAACATAAGACCTCCGG+TGG 0.683703 1:-94285613 None:intergenic
AAATAATTAACCATGACGGG+AGG 0.694207 1:+94285513 MsG0180005632.01.T01:exon
ATTGCACCTTCAAGAATACG+TGG 0.700035 1:+94288201 MsG0180005632.01.T01:CDS
GAAGATGAGAAAGTACCTGG+TGG 0.714138 1:+94290482 MsG0180005632.01.T01:CDS
AACGGTCTTGAGACAGACGA+CGG 0.737114 1:+94285969 MsG0180005632.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACCAAAAAAAAAATTAAAA+GGG - Chr1:94288518-94288537 None:intergenic 10.0%
!! AACTATTGAAATAATTAAAA+GGG - Chr1:94288548-94288567 None:intergenic 10.0%
!! TAACCAAAAAAAAAATTAAA+AGG - Chr1:94288519-94288538 None:intergenic 10.0%
!! TAACTATTGAAATAATTAAA+AGG - Chr1:94288549-94288568 None:intergenic 10.0%
!!! AACTTTTTTTTTTTTTTTTG+AGG - Chr1:94287954-94287973 None:intergenic 10.0%
!!! AATTAGAATTATATTTTTGA+AGG - Chr1:94285740-94285759 None:intergenic 10.0%
!!! AATTGATTTTACATTTATTT+TGG + Chr1:94288423-94288442 MsG0180005632.01.T01:intron 10.0%
!!! ACTTTTTTTTTTTTTTTTGA+GGG - Chr1:94287953-94287972 None:intergenic 10.0%
!!! CTAAGTAAAAATAATAATTT+TGG + Chr1:94288679-94288698 MsG0180005632.01.T01:intron 10.0%
!!! TATAAGTTAAATTTTGTTTT+GGG - Chr1:94287256-94287275 None:intergenic 10.0%
!!! TTATAAGTTAAATTTTGTTT+TGG - Chr1:94287257-94287276 None:intergenic 10.0%
!! AAATAATATAAAGATTTCCT+TGG + Chr1:94287686-94287705 MsG0180005632.01.T01:intron 15.0%
!! AATAATATAAAGATTTCCTT+GGG + Chr1:94287687-94287706 MsG0180005632.01.T01:intron 15.0%
!! ATAAATAAATAAAGGTTTCT+TGG + Chr1:94287721-94287740 MsG0180005632.01.T01:intron 15.0%
!! ATAGCAAAATTTGTATTTAT+TGG + Chr1:94287341-94287360 MsG0180005632.01.T01:intron 15.0%
!! ATCAATAAAAGGTTATAAAA+AGG - Chr1:94289745-94289764 None:intergenic 15.0%
!! TCAATAAAAGGTTATAAAAA+GGG - Chr1:94289744-94289763 None:intergenic 15.0%
!! TTCTATATTAAGAATTTCTT+TGG - Chr1:94289104-94289123 None:intergenic 15.0%
!!! ATAATTTCACATATTTTACA+TGG + Chr1:94286514-94286533 MsG0180005632.01.T01:intron 15.0%
!!! ATTCATAAATTTTATGTAGT+GGG - Chr1:94286350-94286369 None:intergenic 15.0%
!!! ATTTCACATTTTAAATACAA+TGG + Chr1:94286478-94286497 MsG0180005632.01.T01:intron 15.0%
!!! GATATTTATTTTGAAATTGA+AGG - Chr1:94286387-94286406 None:intergenic 15.0%
!!! TTTATAGTACTATTTTCTTA+TGG + Chr1:94285795-94285814 MsG0180005632.01.T01:intron 15.0%
!! ACAAAAATAATTAACCATGA+CGG + Chr1:94285509-94285528 MsG0180005632.01.T01:exon 20.0%
!! ATAATTCAGCTATCAATAAA+AGG - Chr1:94289756-94289775 None:intergenic 20.0%
!! GATCGAAAAAAAAAAAAACA+TGG + Chr1:94286550-94286569 MsG0180005632.01.T01:intron 20.0%
!! GGTATAGATATAATAATCTA+AGG + Chr1:94287584-94287603 MsG0180005632.01.T01:intron 20.0%
!! TAACAAAACATATCTTATGA+TGG + Chr1:94285875-94285894 MsG0180005632.01.T01:intron 20.0%
!! TGACATATTAGTTCATTAAT+TGG + Chr1:94288337-94288356 MsG0180005632.01.T01:intron 20.0%
!! TTATATAAAAGTCTAACACA+GGG + Chr1:94288446-94288465 MsG0180005632.01.T01:intron 20.0%
!!! AAGCATATGTGTTATAATTT+TGG - Chr1:94289060-94289079 None:intergenic 20.0%
!!! AATTACTTTTATCTTACGAT+TGG - Chr1:94287490-94287509 None:intergenic 20.0%
!!! ACAAAAATTATAGTCACTTT+AGG + Chr1:94287383-94287402 MsG0180005632.01.T01:intron 20.0%
!!! GATTCATAAATTTTATGTAG+TGG - Chr1:94286351-94286370 None:intergenic 20.0%
!!! TAAGCAAAAAGTAGTTTTTT+AGG - Chr1:94289006-94289025 None:intergenic 20.0%
!!! TAGGTTTTGTAATTTTTATC+AGG + Chr1:94286706-94286725 MsG0180005632.01.T01:intron 20.0%
!!! TCTTATTTTAGTCATAACTT+TGG + Chr1:94287996-94288015 MsG0180005632.01.T01:intron 20.0%
!!! TGCCCTTTTAATTTTTTTTT+TGG + Chr1:94288513-94288532 MsG0180005632.01.T01:intron 20.0%
!!! TGGTTGATTTAATTGTTTTA+AGG + Chr1:94285904-94285923 MsG0180005632.01.T01:intron 20.0%
!!! TTATATTTTTATACTCCATC+CGG + Chr1:94288885-94288904 MsG0180005632.01.T01:intron 20.0%
!!! TTGATTTAATTGTTTTAAGG+CGG + Chr1:94285907-94285926 MsG0180005632.01.T01:intron 20.0%
!!! TTTACATGGATTTTTAAAGT+TGG + Chr1:94286528-94286547 MsG0180005632.01.T01:intron 20.0%
! AAAATCAAATTACACTAACC+TGG - Chr1:94286251-94286270 None:intergenic 25.0%
! AACGATAGTCTCAATATATT+CGG + Chr1:94289974-94289993 MsG0180005632.01.T01:CDS 25.0%
! AAGATTAGTACAAACCATTA+GGG - Chr1:94289536-94289555 None:intergenic 25.0%
! AAGGATGCAATACAATTATA+AGG - Chr1:94288312-94288331 None:intergenic 25.0%
! AGTATTACTTAAGGAATCAA+AGG - Chr1:94288028-94288047 None:intergenic 25.0%
! ATAAAAAAACTAAGATGTCG+TGG + Chr1:94289699-94289718 MsG0180005632.01.T01:intron 25.0%
! ATGTATGTAGTCACATTTAT+AGG + Chr1:94288955-94288974 MsG0180005632.01.T01:intron 25.0%
! ATTATAAGGAACTTACTTGT+TGG - Chr1:94288298-94288317 None:intergenic 25.0%
! ATTCACTTCATCATTGTATT+TGG + Chr1:94286047-94286066 MsG0180005632.01.T01:intron 25.0%
! CAAAAATAATTAACCATGAC+GGG + Chr1:94285510-94285529 MsG0180005632.01.T01:exon 25.0%
! CATCATTAGAAGACAAAAAT+AGG + Chr1:94286687-94286706 MsG0180005632.01.T01:intron 25.0%
! CATTATCATTTCATGCATAA+TGG + Chr1:94285587-94285606 MsG0180005632.01.T01:CDS 25.0%
! CTATCATATTATCTATGCTT+AGG - Chr1:94289572-94289591 None:intergenic 25.0%
! GAACTAATATGTCAAACAAA+AGG - Chr1:94288331-94288350 None:intergenic 25.0%
! GTTATATAAAAGTCTAACAC+AGG + Chr1:94288445-94288464 MsG0180005632.01.T01:intron 25.0%
! TAAGATTAGTACAAACCATT+AGG - Chr1:94289537-94289556 None:intergenic 25.0%
! TATCCTAAACTTTCAATCAA+TGG + Chr1:94287563-94287582 MsG0180005632.01.T01:intron 25.0%
! TCATTAATGTTGCTCAAATA+TGG + Chr1:94289812-94289831 MsG0180005632.01.T01:intron 25.0%
! TGAAAACATTCATAAATCAC+AGG + Chr1:94287297-94287316 MsG0180005632.01.T01:intron 25.0%
! TTCAAACCTTAATATGTGTT+TGG + Chr1:94285709-94285728 MsG0180005632.01.T01:intron 25.0%
! TTTGAGCAACATTAATGAAA+AGG - Chr1:94289810-94289829 None:intergenic 25.0%
!! AAAAGCTACTTTAACACAAT+GGG - Chr1:94290637-94290656 None:intergenic 25.0%
!! ACTATTTGTCTAGAGTAAAT+TGG - Chr1:94289170-94289189 None:intergenic 25.0%
!! ATACCATTGATTGAAAGTTT+AGG - Chr1:94287569-94287588 None:intergenic 25.0%
!! ATGCATGAAATGATAATGAT+AGG - Chr1:94285585-94285604 None:intergenic 25.0%
!! CTAAGTGTAACAATTTTACA+TGG + Chr1:94286439-94286458 MsG0180005632.01.T01:intron 25.0%
!! GAGAGTGATATTTTCTTAAT+TGG - Chr1:94285405-94285424 None:intergenic 25.0%
!! TACTATTTTCTTATGGAAAG+TGG + Chr1:94285802-94285821 MsG0180005632.01.T01:intron 25.0%
!! TATTTTCGCTATTGCAATTA+GGG - Chr1:94289682-94289701 None:intergenic 25.0%
!! TCACTTTAGGAAAAACAAAA+AGG + Chr1:94287396-94287415 MsG0180005632.01.T01:intron 25.0%
!! TGTTTTGTCAAATAAATGCA+TGG + Chr1:94290570-94290589 MsG0180005632.01.T01:three_prime_UTR 25.0%
!! TTATTTTCGCTATTGCAATT+AGG - Chr1:94289683-94289702 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG + Chr1:94289016-94289035 MsG0180005632.01.T01:intron 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG - Chr1:94289035-94289016 None:intergenic 25.0%
!!! AATATATTCGGTTGATAAAC+TGG + Chr1:94289986-94290005 MsG0180005632.01.T01:CDS 25.0%
!!! ACAATTTTATTGTTTTGTCC+AGG - Chr1:94288494-94288513 None:intergenic 25.0%
!!! ACCAAAAGGTTTTAAAAGTT+CGG - Chr1:94287656-94287675 None:intergenic 25.0%
!!! AGTCACTAATATTGTTTTGA+TGG + Chr1:94288148-94288167 MsG0180005632.01.T01:intron 25.0%
!!! ATATATTCGGTTGATAAACT+GGG + Chr1:94289987-94290006 MsG0180005632.01.T01:CDS 25.0%
!!! ATATCTTATGATGGATGATA+TGG + Chr1:94285884-94285903 MsG0180005632.01.T01:intron 25.0%
!!! ATGCTTTGTTATTTCAAGTT+TGG + Chr1:94290305-94290324 MsG0180005632.01.T01:CDS 25.0%
!!! TATTTATTTTTTGTGCGACA+TGG - Chr1:94286295-94286314 None:intergenic 25.0%
!!! TGAAATAACAAAGCATTGAA+AGG - Chr1:94290301-94290320 None:intergenic 25.0%
!!! TGCTAACTTTTTCATCTAAT+TGG + Chr1:94287228-94287247 MsG0180005632.01.T01:intron 25.0%
!!! TTTATTTTTACAAAGTCCCA+AGG - Chr1:94287706-94287725 None:intergenic 25.0%
AACCTTAATATGTGTTTGGT+CGG + Chr1:94285713-94285732 MsG0180005632.01.T01:intron 30.0%
ACAATGGGAATGATAAATTC+TGG - Chr1:94290622-94290641 None:intergenic 30.0%
AGAAAAAGAATGATGCATAG+TGG + Chr1:94287627-94287646 MsG0180005632.01.T01:intron 30.0%
AGAATACTTTCATGCCAAAA+AGG - Chr1:94287791-94287810 None:intergenic 30.0%
ATAACAGAATCAAAGGTCAT+TGG + Chr1:94289242-94289261 MsG0180005632.01.T01:intron 30.0%
ATAGAGATAGCTACAATGAA+TGG - Chr1:94287977-94287996 None:intergenic 30.0%
CATAGATAATATGATAGCCA+AGG + Chr1:94289575-94289594 MsG0180005632.01.T01:intron 30.0%
CTTATGTTTGGTTATGATGT+TGG + Chr1:94285624-94285643 MsG0180005632.01.T01:CDS 30.0%
GAAAGAAGTTAGCATTCATT+AGG - Chr1:94285661-94285680 None:intergenic 30.0%
GCTAAAAATTCGAGAATTGT+GGG + Chr1:94288795-94288814 MsG0180005632.01.T01:intron 30.0%
GTAATACTGTATGCTACAAA+CGG + Chr1:94288040-94288059 MsG0180005632.01.T01:intron 30.0%
GTAGCATACAGTATTACTTA+AGG - Chr1:94288037-94288056 None:intergenic 30.0%
TAACAGAATCAAAGGTCATT+GGG + Chr1:94289243-94289262 MsG0180005632.01.T01:intron 30.0%
TACTCTTACACTAGTGAAAT+TGG - Chr1:94285834-94285853 None:intergenic 30.0%
TACTGTTGTGTGTATATACT+AGG + Chr1:94286755-94286774 MsG0180005632.01.T01:intron 30.0%
TCAAATGTTCTTGTCACAAA+TGG + Chr1:94290040-94290059 MsG0180005632.01.T01:CDS 30.0%
TCACACTTTGTGATAACAAT+TGG + Chr1:94288117-94288136 MsG0180005632.01.T01:intron 30.0%
TCCAAACATTACAATGTTAC+AGG - Chr1:94290691-94290710 None:intergenic 30.0%
TCCTGTAACATTGTAATGTT+TGG + Chr1:94290687-94290706 MsG0180005632.01.T01:three_prime_UTR 30.0%
TCTTTGCATAACAGAATCAA+AGG + Chr1:94289235-94289254 MsG0180005632.01.T01:intron 30.0%
TTGGACTTATGCTAATAGTA+AGG + Chr1:94287360-94287379 MsG0180005632.01.T01:intron 30.0%
TTTGTGTCATCTCTTCAATA+GGG - Chr1:94290409-94290428 None:intergenic 30.0%
! ACGCATACATTTTATATGCT+CGG - Chr1:94288834-94288853 None:intergenic 30.0%
! CAAAAGCTACTTTAACACAA+TGG - Chr1:94290638-94290657 None:intergenic 30.0%
! TTTTGTCTTCAACAATGCTT+AGG - Chr1:94285495-94285514 None:intergenic 30.0%
! TTTTGTGTCATCTCTTCAAT+AGG - Chr1:94290410-94290429 None:intergenic 30.0%
!! ACTAGGAGAAATGTTTTTGA+TGG + Chr1:94286772-94286791 MsG0180005632.01.T01:intron 30.0%
!!! AATATTGTTTTGATGGAGAC+AGG + Chr1:94288155-94288174 MsG0180005632.01.T01:intron 30.0%
!!! ATAGCCAAGGTTTTAATTCA+TGG + Chr1:94289588-94289607 MsG0180005632.01.T01:intron 30.0%
!!! GAACTTTTAAAACCTTTTGG+TGG + Chr1:94287655-94287674 MsG0180005632.01.T01:intron 30.0%
!!! TTGTGATAACAATTGGCTTT+TGG + Chr1:94288124-94288143 MsG0180005632.01.T01:intron 30.0%
!!! TTTTTTGAGGGAACAATGAA+TGG - Chr1:94287941-94287960 None:intergenic 30.0%
AAATGAAATCATGCCCAAAG+TGG - Chr1:94287853-94287872 None:intergenic 35.0%
AACAGAATCAAAGGTCATTG+GGG + Chr1:94289244-94289263 MsG0180005632.01.T01:intron 35.0%
AACTGGAGCATAGAACATTA+TGG - Chr1:94289877-94289896 None:intergenic 35.0%
AAGAGATGACACAAAAAGTG+TGG + Chr1:94290414-94290433 MsG0180005632.01.T01:CDS 35.0%
ACGTTCAATGAGACTATTTG+GGG - Chr1:94289344-94289363 None:intergenic 35.0%
ACTGCAAATACGATAACCAA+GGG + Chr1:94286016-94286035 MsG0180005632.01.T01:intron 35.0%
ACTTCATCATTGTATTTGGC+GGG + Chr1:94286051-94286070 MsG0180005632.01.T01:intron 35.0%
AGACAAGATCATTTCTGCTA+GGG - Chr1:94290514-94290533 None:intergenic 35.0%
AGACTGATTAAGACTTTGTG+TGG - Chr1:94287750-94287769 None:intergenic 35.0%
ATAAAAGTCTAACACAGGGT+CGG + Chr1:94288450-94288469 MsG0180005632.01.T01:intron 35.0%
ATAACCAAACATAAGACCTC+CGG - Chr1:94285619-94285638 None:intergenic 35.0%
ATACTTTCATGCCAAAAAGG+TGG - Chr1:94287788-94287807 None:intergenic 35.0%
ATGGTGATAGCAATTGTACT+AGG + Chr1:94290059-94290078 MsG0180005632.01.T01:CDS 35.0%
ATGTTACAGGATAATTGCCA+TGG - Chr1:94290678-94290697 None:intergenic 35.0%
ATTGCATCCGTTAAAATCCA+TGG - Chr1:94286607-94286626 None:intergenic 35.0%
CACGTTCAATGAGACTATTT+GGG - Chr1:94289345-94289364 None:intergenic 35.0%
CACTTCATCATTGTATTTGG+CGG + Chr1:94286050-94286069 MsG0180005632.01.T01:intron 35.0%
CAGATATTTCAGCAATTCAC+TGG + Chr1:94289843-94289862 MsG0180005632.01.T01:intron 35.0%
CTTGAAGAAGTTCTTTCCAA+CGG + Chr1:94285951-94285970 MsG0180005632.01.T01:CDS 35.0%
CTTGTAACATTGTATTGCCA+TGG + Chr1:94290658-94290677 MsG0180005632.01.T01:three_prime_UTR 35.0%
GACATGGTTAGATAACCTAA+GGG - Chr1:94286279-94286298 None:intergenic 35.0%
GACTGATTAAGACTTTGTGT+GGG - Chr1:94287749-94287768 None:intergenic 35.0%
GCAACCATGAATTAAAACCT+TGG - Chr1:94289595-94289614 None:intergenic 35.0%
GGAAAGAACTTCTTCAAGAA+GGG - Chr1:94285949-94285968 None:intergenic 35.0%
GGCTAAAAATTCGAGAATTG+TGG + Chr1:94288794-94288813 MsG0180005632.01.T01:intron 35.0%
GTCTCTCAGTTGTAAATTAG+AGG + Chr1:94290530-94290549 MsG0180005632.01.T01:exon 35.0%
GTCTTCTAATGATGTACACA+AGG - Chr1:94286681-94286700 None:intergenic 35.0%
TACTGCAAATACGATAACCA+AGG + Chr1:94286015-94286034 MsG0180005632.01.T01:intron 35.0%
TCTAGTGGAAATATCTCACT+TGG - Chr1:94290206-94290225 None:intergenic 35.0%
TCTTATACAACTCGAGTACT+AGG + Chr1:94286096-94286115 MsG0180005632.01.T01:intron 35.0%
TGGAAAGAACTTCTTCAAGA+AGG - Chr1:94285950-94285969 None:intergenic 35.0%
TGTACTAGGAATCAAAGTGA+AGG + Chr1:94290073-94290092 MsG0180005632.01.T01:CDS 35.0%
TGTAGTCACATTTATAGGTC+AGG + Chr1:94288960-94288979 MsG0180005632.01.T01:intron 35.0%
TTTCAGCTTGATATCACTCT+TGG + Chr1:94288240-94288259 MsG0180005632.01.T01:CDS 35.0%
! AAATAATTAACCATGACGGG+AGG + Chr1:94285513-94285532 MsG0180005632.01.T01:exon 35.0%
! ATAAGGAACTTACTTGTTGG+TGG - Chr1:94288295-94288314 None:intergenic 35.0%
! ATTTGTTAGTTGCCACCAAA+AGG - Chr1:94287670-94287689 None:intergenic 35.0%
! CTCTACTAACTCTAAGAACT+CGG - Chr1:94289428-94289447 None:intergenic 35.0%
! GATGTCTCCATGGATTTTAA+CGG + Chr1:94286597-94286616 MsG0180005632.01.T01:intron 35.0%
! GGTATCTTCTTTTTCTTCTC+TGG + Chr1:94290326-94290345 MsG0180005632.01.T01:CDS 35.0%
! TCTACTAACTCTAAGAACTC+GGG - Chr1:94289427-94289446 None:intergenic 35.0%
! TCTTCTTTTTCTTCTCTGGT+TGG + Chr1:94290330-94290349 MsG0180005632.01.T01:CDS 35.0%
! TTTTTGTGTCAGCATTTGCA+TGG + Chr1:94290153-94290172 MsG0180005632.01.T01:CDS 35.0%
!! ATTGAAGATGAGAAAGTACC+TGG + Chr1:94290479-94290498 MsG0180005632.01.T01:CDS 35.0%
!! ATTGTATTTGGCGGGTTTAA+CGG + Chr1:94286059-94286078 MsG0180005632.01.T01:intron 35.0%
!! ATTTGATTTTGCTCTCCCTT+AGG + Chr1:94286261-94286280 MsG0180005632.01.T01:intron 35.0%
!! TGAAATTGAAGGAGTGTTAG+TGG - Chr1:94286376-94286395 None:intergenic 35.0%
!!! GCCGAACTTTTAAAACCTTT+TGG + Chr1:94287652-94287671 MsG0180005632.01.T01:intron 35.0%
!!! TTAATTGTTTTAAGGCGGTG+TGG + Chr1:94285912-94285931 MsG0180005632.01.T01:intron 35.0%
!!! TTTTGGTGCCCCTAAAATAA+TGG + Chr1:94288696-94288715 MsG0180005632.01.T01:intron 35.0%
AAGAACTTCTTCAAGAAGGG+TGG - Chr1:94285946-94285965 None:intergenic 40.0%
AAGAGTTTCGTTGTTAGACC+AGG - Chr1:94288764-94288783 None:intergenic 40.0%
AATGCTCCACGTATTCTTGA+AGG - Chr1:94288210-94288229 None:intergenic 40.0%
ACGAAACTCTTGCACACTAA+AGG + Chr1:94288773-94288792 MsG0180005632.01.T01:intron 40.0%
AGAGTTTCGTTGTTAGACCA+GGG - Chr1:94288763-94288782 None:intergenic 40.0%
AGCATTACTCCTCACTTTAG+GGG + Chr1:94289300-94289319 MsG0180005632.01.T01:CDS 40.0%
AGTACAAACCATTAGGGCAA+TGG - Chr1:94289530-94289549 None:intergenic 40.0%
AGTTGTATAAGACGCGAAGA+AGG - Chr1:94286088-94286107 None:intergenic 40.0%
ATAGGGACATTCTTTGTCTC+AGG - Chr1:94290392-94290411 None:intergenic 40.0%
ATGCCAAAAAGGTGGATATG+GGG - Chr1:94287780-94287799 None:intergenic 40.0%
ATTGCACCTTCAAGAATACG+TGG + Chr1:94288201-94288220 MsG0180005632.01.T01:CDS 40.0%
CAGCATTACTCCTCACTTTA+GGG + Chr1:94289299-94289318 MsG0180005632.01.T01:CDS 40.0%
CATGCCAAAAAGGTGGATAT+GGG - Chr1:94287781-94287800 None:intergenic 40.0%
CCAAATAGTCTCATTGAACG+TGG + Chr1:94289343-94289362 MsG0180005632.01.T01:CDS 40.0%
CCACGTTCAATGAGACTATT+TGG - Chr1:94289346-94289365 None:intergenic 40.0%
CCAGTTCTGTTCAACACATT+GGG + Chr1:94289891-94289910 MsG0180005632.01.T01:CDS 40.0%
CGACATGGTTAGATAACCTA+AGG - Chr1:94286280-94286299 None:intergenic 40.0%
CGAGTTCTTAGAGTTAGTAG+AGG + Chr1:94289426-94289445 MsG0180005632.01.T01:CDS 40.0%
CTAAAGTGAGGAGTAATGCT+GGG - Chr1:94289300-94289319 None:intergenic 40.0%
CTTTACTCTGCTGTGATTAC+TGG + Chr1:94289933-94289952 MsG0180005632.01.T01:CDS 40.0%
GACAAGATCATTTCTGCTAG+GGG - Chr1:94290513-94290532 None:intergenic 40.0%
GACCGACCAAACACATATTA+AGG - Chr1:94285718-94285737 None:intergenic 40.0%
GAGACAAGATCATTTCTGCT+AGG - Chr1:94290515-94290534 None:intergenic 40.0%
GCAATGGAAATGACAAGTTG+AGG - Chr1:94289514-94289533 None:intergenic 40.0%
GGTTATGATGTTGGAGTTTC+AGG + Chr1:94285633-94285652 MsG0180005632.01.T01:CDS 40.0%
TAGGGACATTCTTTGTCTCA+GGG - Chr1:94290391-94290410 None:intergenic 40.0%
TCATGCCAAAAAGGTGGATA+TGG - Chr1:94287782-94287801 None:intergenic 40.0%
TCCAGGACACCAAAAATCTT+AGG - Chr1:94288477-94288496 None:intergenic 40.0%
TCCAGTTCTGTTCAACACAT+TGG + Chr1:94289890-94289909 MsG0180005632.01.T01:CDS 40.0%
TGCTTATAAATGTGACCGGA+GGG + Chr1:94289020-94289039 MsG0180005632.01.T01:intron 40.0%
TGCTTATAAATGTGACCGGA+TGG - Chr1:94289039-94289020 None:intergenic 40.0%
TGGAATTGGATTTGCAAACC+AGG + Chr1:94286230-94286249 MsG0180005632.01.T01:intron 40.0%
TTATGAGTCATGACACTTGC+TGG + Chr1:94287824-94287843 MsG0180005632.01.T01:intron 40.0%
TTGCTTATAAATGTGACCGG+AGG + Chr1:94289019-94289038 MsG0180005632.01.T01:intron 40.0%
TTTCGCTATTGCAATTAGGG+CGG - Chr1:94289679-94289698 None:intergenic 40.0%
! AAAAAGTGTGGAAGCAGCAT+TGG + Chr1:94290426-94290445 MsG0180005632.01.T01:CDS 40.0%
! ATTCTGAGGAACTCTCGAAA+GGG + Chr1:94290099-94290118 MsG0180005632.01.T01:CDS 40.0%
! CTACAAACGGTACACGATTT+TGG + Chr1:94288053-94288072 MsG0180005632.01.T01:intron 40.0%
! GCAATCTCTGAAAGGAAAAC+TGG - Chr1:94288186-94288205 None:intergenic 40.0%
! TGGAAATGACAAGTTGAGGT+CGG - Chr1:94289510-94289529 None:intergenic 40.0%
! TGTCATTTCCATTGCCCTAA+TGG + Chr1:94289519-94289538 MsG0180005632.01.T01:CDS 40.0%
! TTGAAGGTGCAATCTCTGAA+AGG - Chr1:94288194-94288213 None:intergenic 40.0%
!!! TCCTAAGATTTTTGGTGTCC+TGG + Chr1:94288473-94288492 MsG0180005632.01.T01:intron 40.0%
AACCTTCTCATGCTCATCGT+TGG + Chr1:94286189-94286208 MsG0180005632.01.T01:intron 45.0%
AAGATTTCACTGTGCGAGTG+TGG + Chr1:94285465-94285484 MsG0180005632.01.T01:five_prime_UTR 45.0%
AAGTGAATAGCTGCAACCCT+TGG - Chr1:94286035-94286054 None:intergenic 45.0%
AGAACCACGCGTTCACTAAA+AGG - Chr1:94287440-94287459 None:intergenic 45.0%
AGGGTCTGCAATTGCAATTG+TGG - Chr1:94289725-94289744 None:intergenic 45.0%
CAAAGTGAAGGACCATTCTG+AGG + Chr1:94290085-94290104 MsG0180005632.01.T01:CDS 45.0%
CAACTCGAGTACTAGGAAGA+AGG + Chr1:94286103-94286122 MsG0180005632.01.T01:intron 45.0%
CATTCTTTGTCTCAGGGACA+AGG - Chr1:94290385-94290404 None:intergenic 45.0%
CCAGCATTACTCCTCACTTT+AGG + Chr1:94289298-94289317 MsG0180005632.01.T01:CDS 45.0%
CCCAATGTGTTGAACAGAAC+TGG - Chr1:94289894-94289913 None:intergenic 45.0%
CCCTAAAATAATGGTGCCCT+GGG + Chr1:94288705-94288724 MsG0180005632.01.T01:intron 45.0%
CCTAAAGTGAGGAGTAATGC+TGG - Chr1:94289301-94289320 None:intergenic 45.0%
CGAAAGCTATTACTCGAAGC+TGG + Chr1:94290014-94290033 MsG0180005632.01.T01:CDS 45.0%
CGCTTGAGGAGATTTCTGAA+CGG - Chr1:94289481-94289500 None:intergenic 45.0%
CTTGGAATAAGCCAAGCAAG+TGG - Chr1:94290188-94290207 None:intergenic 45.0%
CTTTCGAGAGTTCCTCAGAA+TGG - Chr1:94290100-94290119 None:intergenic 45.0%
GAATCAAAGGTCATTGGGGT+TGG + Chr1:94289248-94289267 MsG0180005632.01.T01:intron 45.0%
GAGTTTCGTTGTTAGACCAG+GGG - Chr1:94288762-94288781 None:intergenic 45.0%
GTACTATTGCGATGTCTCCA+TGG + Chr1:94286587-94286606 MsG0180005632.01.T01:intron 45.0%
GTCAGCATTTGCATGGTCAT+GGG + Chr1:94290160-94290179 MsG0180005632.01.T01:CDS 45.0%
GTCTTACTTGGCTGTGGAAT+TGG + Chr1:94286216-94286235 MsG0180005632.01.T01:intron 45.0%
TACCAACGATGAGCATGAGA+AGG - Chr1:94286194-94286213 None:intergenic 45.0%
TCAGCATTTGCATGGTCATG+GGG + Chr1:94290161-94290180 MsG0180005632.01.T01:CDS 45.0%
TCTCATGCTCATCGTTGGTA+GGG + Chr1:94286194-94286213 MsG0180005632.01.T01:intron 45.0%
TCTCATTGAACGTGGTCACT+TGG + Chr1:94289351-94289370 MsG0180005632.01.T01:CDS 45.0%
TGCAGCTCTTGTAGTTGTGA+TGG + Chr1:94290124-94290143 MsG0180005632.01.T01:CDS 45.0%
TGTCAGCATTTGCATGGTCA+TGG + Chr1:94290159-94290178 MsG0180005632.01.T01:CDS 45.0%
TTCTCATGCTCATCGTTGGT+AGG + Chr1:94286193-94286212 MsG0180005632.01.T01:intron 45.0%
TTTAGGGGCTTACTTGGTAG+TGG + Chr1:94289315-94289334 MsG0180005632.01.T01:CDS 45.0%
! AGGGTCGGTCCTAAGATTTT+TGG + Chr1:94288465-94288484 MsG0180005632.01.T01:intron 45.0%
! ATCGTTGGTAGGGTCTTACT+TGG + Chr1:94286204-94286223 MsG0180005632.01.T01:intron 45.0%
! CAACCCCATATCCACCTTTT+TGG + Chr1:94287774-94287793 MsG0180005632.01.T01:intron 45.0%
! CATTCTGAGGAACTCTCGAA+AGG + Chr1:94290098-94290117 MsG0180005632.01.T01:CDS 45.0%
! CTCTGAAAGGAAAACTGGCA+CGG - Chr1:94288181-94288200 None:intergenic 45.0%
! TAATTAACCATGACGGGAGG+AGG + Chr1:94285516-94285535 MsG0180005632.01.T01:exon 45.0%
!! CCCAGGGCACCATTATTTTA+GGG - Chr1:94288708-94288727 None:intergenic 45.0%
!! GAAGATGAGAAAGTACCTGG+TGG + Chr1:94290482-94290501 MsG0180005632.01.T01:CDS 45.0%
!! TGGAGGATATCTCTGGGATT+GGG + Chr1:94289268-94289287 MsG0180005632.01.T01:CDS 45.0%
!! TGTTGGTGGCATAGTTGACA+AGG - Chr1:94288281-94288300 None:intergenic 45.0%
!! TTGGAGGATATCTCTGGGAT+TGG + Chr1:94289267-94289286 MsG0180005632.01.T01:CDS 45.0%
!!! AGCAGCATTGGTTTTGGAAG+AGG + Chr1:94290438-94290457 MsG0180005632.01.T01:CDS 45.0%
!!! CCAGGGCACCATTATTTTAG+GGG - Chr1:94288707-94288726 None:intergenic 45.0%
!!! TGTGGAAGCAGCATTGGTTT+TGG + Chr1:94290432-94290451 MsG0180005632.01.T01:CDS 45.0%
!! TTGTAAAAATAAATAAATAA+AGG + Chr1:94287713-94287732 MsG0180005632.01.T01:intron 5.0%
!!! ACTATATATATATTTTAATT+CGG - Chr1:94288651-94288670 None:intergenic 5.0%
AACGGTCTTGAGACAGACGA+CGG + Chr1:94285969-94285988 MsG0180005632.01.T01:CDS 50.0%
ACCAAACATAAGACCTCCGG+TGG - Chr1:94285616-94285635 None:intergenic 50.0%
AGACAGACGACGGAATCAGA+TGG + Chr1:94285979-94285998 MsG0180005632.01.T01:CDS 50.0%
AGGCTCACAATGTTGATCGC+TGG + Chr1:94286123-94286142 MsG0180005632.01.T01:intron 50.0%
CACTAGAGACTCGTTCTGCA+GGG + Chr1:94290219-94290238 MsG0180005632.01.T01:CDS 50.0%
CCAAGTAAGCCCCTAAAGTG+AGG - Chr1:94289312-94289331 None:intergenic 50.0%
CCCCTAAAATAATGGTGCCC+TGG + Chr1:94288704-94288723 MsG0180005632.01.T01:intron 50.0%
GAACGTGGTCACTTGGACAA+AGG + Chr1:94289358-94289377 MsG0180005632.01.T01:CDS 50.0%
GACAGACGACGGAATCAGAT+GGG + Chr1:94285980-94285999 MsG0180005632.01.T01:CDS 50.0%
GTGCAATGACAGCAGTGAAG+AGG - Chr1:94290271-94290290 None:intergenic 50.0%
TAAATGTGACCGGAGGGAGT+AGG + Chr1:94289026-94289045 MsG0180005632.01.T01:intron 50.0%
TCAAAGGTCATTGGGGTTGG+AGG + Chr1:94289251-94289270 MsG0180005632.01.T01:CDS 50.0%
TCATGCATAATGGCTGCCAC+CGG + Chr1:94285597-94285616 MsG0180005632.01.T01:CDS 50.0%
TGGGGTTGGAGGATATCTCT+GGG + Chr1:94289262-94289281 MsG0180005632.01.T01:CDS 50.0%
TTGGGGTTGGAGGATATCTC+TGG + Chr1:94289261-94289280 MsG0180005632.01.T01:CDS 50.0%
TTTCGTTGTTAGACCAGGGG+TGG - Chr1:94288759-94288778 None:intergenic 50.0%
! ACACTTGCTGGTGACCACTT+TGG + Chr1:94287836-94287855 MsG0180005632.01.T01:intron 50.0%
! CACTTGCTGGTGACCACTTT+GGG + Chr1:94287837-94287856 MsG0180005632.01.T01:intron 50.0%
! CCTCACTTTAGGGGCTTACT+TGG + Chr1:94289309-94289328 MsG0180005632.01.T01:CDS 50.0%
! CTCACCTTTTAGTGAACGCG+TGG + Chr1:94287433-94287452 MsG0180005632.01.T01:intron 50.0%
! GCTGGCTTCTTCTTCATAGC+TGG + Chr1:94286141-94286160 MsG0180005632.01.T01:intron 50.0%
! GGCAAGTCGTGTTGCTAAAG+AGG + Chr1:94289447-94289466 MsG0180005632.01.T01:CDS 50.0%
!! AGGATATCTCTGGGATTGGG+AGG + Chr1:94289271-94289290 MsG0180005632.01.T01:CDS 50.0%
!! GCCCAGGGCACCATTATTTT+AGG - Chr1:94288709-94288728 None:intergenic 50.0%
CCACTAGAGACTCGTTCTGC+AGG + Chr1:94290218-94290237 MsG0180005632.01.T01:CDS 55.0%
CCTGCAGAACGAGTCTCTAG+TGG - Chr1:94290221-94290240 None:intergenic 55.0%
CGGCAACGGCAGAGAATTTG+AGG + Chr1:94285548-94285567 MsG0180005632.01.T01:CDS 55.0%
CTGCTAGGGGAATTTCCACC+AGG - Chr1:94290500-94290519 None:intergenic 55.0%
GAGGTCGGTTATTGCGCTTG+AGG - Chr1:94289495-94289514 None:intergenic 55.0%
GGTAGGGTCTTACTTGGCTG+TGG + Chr1:94286210-94286229 MsG0180005632.01.T01:intron 55.0%
GTCGTCTGTCTCAAGACCGT+TGG - Chr1:94285970-94285989 None:intergenic 55.0%
GTGCTTTCACCTACTCCCTC+CGG - Chr1:94289038-94289057 None:intergenic 55.0%
! GCCACCGGAGGTCTTATGTT+TGG + Chr1:94285612-94285631 MsG0180005632.01.T01:CDS 55.0%
GGTCATGGGGTCCACTTGCT+TGG + Chr1:94290174-94290193 MsG0180005632.01.T01:CDS 60.0%
TGCATAATGGCTGCCACCGG+AGG + Chr1:94285600-94285619 MsG0180005632.01.T01:CDS 60.0%
! ATGACGGGAGGAGGCTTCAG+CGG + Chr1:94285525-94285544 MsG0180005632.01.T01:CDS 60.0%
GCTGAAGCCTCCTCCCGTCA+TGG - Chr1:94285526-94285545 None:intergenic 65.0%
TAGACCAGGGGTGGCCCTGA+GGG - Chr1:94288750-94288769 None:intergenic 65.0%
TTAGACCAGGGGTGGCCCTG+AGG - Chr1:94288751-94288770 None:intergenic 65.0%
ACGGGAGGAGGCTTCAGCGG+CGG + Chr1:94285528-94285547 MsG0180005632.01.T01:CDS 70.0%
CTGAGGGTGGACGGAAGGGG+CGG - Chr1:94288734-94288753 None:intergenic 70.0%
GCCCCTTCCGTCCACCCTCA+GGG + Chr1:94288733-94288752 MsG0180005632.01.T01:intron 70.0%
GCCCTGAGGGTGGACGGAAG+GGG - Chr1:94288737-94288756 None:intergenic 70.0%
GGAGGCTTCAGCGGCGGCAA+CGG + Chr1:94285534-94285553 MsG0180005632.01.T01:CDS 70.0%
GGCCCTGAGGGTGGACGGAA+GGG - Chr1:94288738-94288757 None:intergenic 70.0%
TGGCCCTGAGGGTGGACGGA+AGG - Chr1:94288739-94288758 None:intergenic 70.0%
ACCAGGGGTGGCCCTGAGGG+TGG - Chr1:94288747-94288766 None:intergenic 75.0%
ACGGAAGGGGCGGCAGCCCA+GGG - Chr1:94288724-94288743 None:intergenic 75.0%
CGCCCCTTCCGTCCACCCTC+AGG + Chr1:94288732-94288751 MsG0180005632.01.T01:intron 75.0%
GGGGTGGCCCTGAGGGTGGA+CGG - Chr1:94288743-94288762 None:intergenic 75.0%
TCCACCCTCAGGGCCACCCC+TGG + Chr1:94288743-94288762 MsG0180005632.01.T01:intron 75.0%
! GACGGAAGGGGCGGCAGCCC+AGG - Chr1:94288725-94288744 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 94285400 94290737 94285400 ID=MsG0180005632.01;Name=MsG0180005632.01
Chr1 mRNA 94285400 94290737 94285400 ID=MsG0180005632.01.T01;Parent=MsG0180005632.01;Name=MsG0180005632.01.T01;_AED=0.43;_eAED=0.43;_QI=125|0.75|0.6|1|0.5|0.8|5|193|441
Chr1 exon 94285400 94285654 94285400 ID=MsG0180005632.01.T01:exon:50071;Parent=MsG0180005632.01.T01
Chr1 exon 94285926 94286001 94285926 ID=MsG0180005632.01.T01:exon:50072;Parent=MsG0180005632.01.T01
Chr1 exon 94288173 94288301 94288173 ID=MsG0180005632.01.T01:exon:50073;Parent=MsG0180005632.01.T01
Chr1 exon 94289249 94289540 94289249 ID=MsG0180005632.01.T01:exon:50074;Parent=MsG0180005632.01.T01
Chr1 exon 94289846 94290737 94289846 ID=MsG0180005632.01.T01:exon:50075;Parent=MsG0180005632.01.T01
Chr1 five_prime_UTR 94285400 94285524 94285400 ID=MsG0180005632.01.T01:five_prime_utr;Parent=MsG0180005632.01.T01
Chr1 CDS 94285525 94285654 94285525 ID=MsG0180005632.01.T01:cds;Parent=MsG0180005632.01.T01
Chr1 CDS 94285926 94286001 94285926 ID=MsG0180005632.01.T01:cds;Parent=MsG0180005632.01.T01
Chr1 CDS 94288173 94288301 94288173 ID=MsG0180005632.01.T01:cds;Parent=MsG0180005632.01.T01
Chr1 CDS 94289249 94289540 94289249 ID=MsG0180005632.01.T01:cds;Parent=MsG0180005632.01.T01
Chr1 CDS 94289846 94290544 94289846 ID=MsG0180005632.01.T01:cds;Parent=MsG0180005632.01.T01
Chr1 three_prime_UTR 94290545 94290737 94290545 ID=MsG0180005632.01.T01:three_prime_utr;Parent=MsG0180005632.01.T01
Gene Sequence

>MsG0180005632.01.T01

ATGACGGGAGGAGGCTTCAGCGGCGGCAACGGCAGAGAATTTGAGGCAAAGATAACTCCTATCATTATCATTTCATGCATAATGGCTGCCACCGGAGGTCTTATGTTTGGTTATGATGTTGGAGTTTCAGGCGGTGTGGCATCGATGCCACCCTTCTTGAAGAAGTTCTTTCCAACGGTCTTGAGACAGACGACGGAATCAGATGGACAGGCCGTGCCAGTTTTCCTTTCAGAGATTGCACCTTCAAGAATACGTGGAGCATTGAATATTTTGTTTCAGCTTGATATCACTCTTGGCATTCTATTTGCTAACCTTGTCAACTATGCCACCAACAAAATCAAAGGTCATTGGGGTTGGAGGATATCTCTGGGATTGGGAGGTATCCCAGCATTACTCCTCACTTTAGGGGCTTACTTGGTAGTGGACACCCCAAATAGTCTCATTGAACGTGGTCACTTGGACAAAGGAAAAGCTGTTCTGAGAAAGATTCGTGGCACGGACAACATTGAACCCGAGTTCTTAGAGTTAGTAGAGGCAAGTCGTGTTGCTAAAGAGGTGAAACATCCGTTCAGAAATCTCCTCAAGCGCAATAACCGACCTCAACTTGTCATTTCCATTGCCCTAATGATATTTCAGCAATTCACTGGCATCAATGCCATAATGTTCTATGCTCCAGTTCTGTTCAACACATTGGGATTCAAGAATGATGCTGCACTTTACTCTGCTGTGATTACTGGTGCTATCAATGTCGTCTCAACGATAGTCTCAATATATTCGGTTGATAAACTGGGACGTCGAAAGCTATTACTCGAAGCTGGTGTTCAAATGTTCTTGTCACAAATGGTGATAGCAATTGTACTAGGAATCAAAGTGAAGGACCATTCTGAGGAACTCTCGAAAGGGTATGCAGCTCTTGTAGTTGTGATGGTGTGTATTTTTGTGTCAGCATTTGCATGGTCATGGGGTCCACTTGCTTGGCTTATTCCAAGTGAGATATTTCCACTAGAGACTCGTTCTGCAGGGCAAAGTGTAACAGTTTGTGTCAACTTCCTCTTCACTGCTGTCATTGCACAAGCTTTCCTTTCAATGCTTTGTTATTTCAAGTTTGGTATCTTCTTTTTCTTCTCTGGTTGGATCTTGTTCATGTCAACTTTTGTCTTTTTCCTTGTCCCTGAGACAAAGAATGTCCCTATTGAAGAGATGACACAAAAAGTGTGGAAGCAGCATTGGTTTTGGAAGAGGTTTGTTGAAAATGATTATATTGAAGATGAGAAAGTACCTGGTGGAAATTCCCCTAGCAGAAATGATCTTGTCTCTCAGTTGTAA
Protein sequence

>MsG0180005632.01.T01

MTGGGFSGGNGREFEAKITPIIIISCIMAATGGLMFGYDVGVSGGVASMPPFLKKFFPTVLRQTTESDGQAVPVFLSEIAPSRIRGALNILFQLDITLGILFANLVNYATNKIKGHWGWRISLGLGGIPALLLTLGAYLVVDTPNSLIERGHLDKGKAVLRKIRGTDNIEPEFLELVEASRVAKEVKHPFRNLLKRNNRPQLVISIALMIFQQFTGINAIMFYAPVLFNTLGFKNDAALYSAVITGAINVVSTIVSIYSVDKLGRRKLLLEAGVQMFLSQMVIAIVLGIKVKDHSEELSKGYAALVVVMVCIFVSAFAWSWGPLAWLIPSEIFPLETRSAGQSVTVCVNFLFTAVIAQAFLSMLCYFKFGIFFFFSGWILFMSTFVFFLVPETKNVPIEEMTQKVWKQHWFWKRFVENDYIEDEKVPGGNSPSRNDLVSQL*