AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040977.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040977.01.T01 MTR_7g102110 88.772 285 17 2 1 285 1 270 5.31e-167 464
MsG0780040977.01.T01 MTR_2g095520 47.205 322 121 10 1 287 1 308 7.39e-77 237
MsG0780040977.01.T01 MTR_4g057635 81.667 120 22 0 1 120 1 120 3.91e-75 233
MsG0780040977.01.T01 MTR_1g017140 79.832 119 24 0 1 119 1 119 3.06e-73 228
MsG0780040977.01.T01 MTR_5g014990 69.444 144 38 1 1 144 1 138 1.89e-72 225
MsG0780040977.01.T01 MTR_3g103570 70.803 137 39 1 1 137 1 136 4.52e-72 225
MsG0780040977.01.T01 MTR_4g097570 80.000 110 22 0 1 110 1 110 5.98e-68 213
MsG0780040977.01.T01 MTR_1g017000 56.983 179 68 2 1 179 1 170 1.75e-66 208
MsG0780040977.01.T01 MTR_4g097570 80.180 111 21 1 1 110 1 111 2.49e-66 209
MsG0780040977.01.T01 MTR_4g128670 80.180 111 22 0 1 111 1 111 2.70e-66 211
MsG0780040977.01.T01 MTR_6g090405 70.312 128 38 0 1 128 1 128 1.05e-63 201
MsG0780040977.01.T01 MTR_6g009430 65.000 120 41 1 1 120 1 119 1.34e-55 182
MsG0780040977.01.T01 MTR_3g461490 47.368 190 90 3 1 185 1 185 4.91e-54 178
MsG0780040977.01.T01 MTR_3g074520 61.667 120 45 1 1 120 1 119 7.19e-53 176
MsG0780040977.01.T01 MTR_5g029840 62.500 120 44 1 1 120 1 119 8.57e-53 175
MsG0780040977.01.T01 MTR_6g012690 56.291 151 63 3 1 150 1 149 8.60e-53 176
MsG0780040977.01.T01 MTR_4g478180 61.667 120 45 1 1 120 2 120 3.26e-52 174
MsG0780040977.01.T01 MTR_7g011170 56.000 150 62 3 1 150 1 146 7.37e-52 172
MsG0780040977.01.T01 MTR_2g011660 61.983 121 44 2 1 120 1 120 1.31e-51 172
MsG0780040977.01.T01 MTR_7g076740 59.167 120 49 0 1 120 1 120 4.13e-51 170
MsG0780040977.01.T01 MTR_4g091490 60.331 121 46 2 1 120 1 120 1.66e-50 170
MsG0780040977.01.T01 MTR_7g010210 59.843 127 50 1 1 127 1 126 2.58e-50 169
MsG0780040977.01.T01 MTR_1g100653 60.684 117 45 1 1 117 1 116 2.60e-50 168
MsG0780040977.01.T01 MTR_7g010210 59.843 127 50 1 1 127 1 126 4.31e-50 166
MsG0780040977.01.T01 MTR_0140s0030 61.538 117 44 1 1 117 2 117 1.06e-49 167
MsG0780040977.01.T01 MTR_0489s0020 61.538 117 44 1 1 117 2 117 1.06e-49 167
MsG0780040977.01.T01 MTR_4g082230 60.833 120 46 1 1 120 1 119 3.96e-49 168
MsG0780040977.01.T01 MTR_7g087130 53.503 157 59 4 1 157 1 143 4.49e-49 166
MsG0780040977.01.T01 MTR_4g082290 61.667 120 45 1 1 120 1 119 7.02e-49 167
MsG0780040977.01.T01 MTR_3g039990 59.350 123 49 1 1 123 2 123 7.84e-49 164
MsG0780040977.01.T01 MTR_2g089620 59.322 118 47 1 1 118 1 117 9.27e-49 165
MsG0780040977.01.T01 MTR_4g073420 56.780 118 50 1 1 118 1 117 2.06e-48 162
MsG0780040977.01.T01 MTR_8g031360 58.678 121 49 1 1 120 1 121 2.52e-48 163
MsG0780040977.01.T01 MTR_1g076150 59.504 121 48 1 1 121 1 120 4.06e-48 161
MsG0780040977.01.T01 MTR_7g117730 57.265 117 49 1 1 117 1 116 5.91e-48 160
MsG0780040977.01.T01 MTR_8g027345 58.120 117 48 1 1 117 1 116 1.18e-47 161
MsG0780040977.01.T01 MTR_5g007370 58.333 120 49 1 1 120 1 119 1.30e-47 161
MsG0780040977.01.T01 MTR_5g079670 57.627 118 49 1 3 120 2 118 4.21e-47 157
MsG0780040977.01.T01 MTR_3g097450 57.265 117 49 1 1 117 1 116 4.28e-47 159
MsG0780040977.01.T01 MTR_1g043080 38.554 249 129 6 1 234 1 240 4.37e-47 158
MsG0780040977.01.T01 MTR_4g121460 47.945 146 75 1 1 146 1 145 7.01e-47 160
MsG0780040977.01.T01 MTR_7g096930 44.382 178 97 2 1 177 1 177 9.68e-47 158
MsG0780040977.01.T01 MTR_8g095390 58.974 117 47 1 1 117 1 116 1.12e-46 159
MsG0780040977.01.T01 MTR_1g043050 56.693 127 52 2 1 125 1 126 1.47e-46 157
MsG0780040977.01.T01 MTR_2g034790 50.667 150 72 2 1 149 1 149 2.92e-46 158
MsG0780040977.01.T01 MTR_4g125520 51.111 135 65 1 1 135 1 134 3.33e-46 157
MsG0780040977.01.T01 MTR_6g012180 62.162 111 41 1 1 111 1 110 3.85e-46 157
MsG0780040977.01.T01 MTR_7g115650 56.410 117 50 1 1 117 1 116 5.38e-46 154
MsG0780040977.01.T01 MTR_3g083540 57.018 114 48 1 5 118 34 146 1.09e-45 156
MsG0780040977.01.T01 MTR_5g078140 42.347 196 107 3 1 196 1 190 1.90e-45 156
MsG0780040977.01.T01 MTR_8g098860 58.120 117 48 1 1 117 1 116 2.87e-45 155
MsG0780040977.01.T01 MTR_4g102380 56.667 120 51 1 1 120 1 119 3.07e-45 154
MsG0780040977.01.T01 MTR_1g085040 58.974 117 47 1 1 117 1 116 3.88e-45 156
MsG0780040977.01.T01 MTR_0251s0050 40.086 232 106 7 1 200 1 231 5.60e-45 153
MsG0780040977.01.T01 MTR_3g065440 57.500 120 50 1 1 120 1 119 1.87e-44 153
MsG0780040977.01.T01 MTR_0063s0090 58.772 114 46 1 1 114 1 113 4.34e-44 149
MsG0780040977.01.T01 MTR_1g085640 57.265 117 49 1 1 117 1 116 5.24e-44 154
MsG0780040977.01.T01 MTR_4g105130 55.085 118 52 1 1 118 1 117 6.21e-44 153
MsG0780040977.01.T01 MTR_7g110830 57.265 117 49 1 1 117 1 116 2.15e-43 152
MsG0780040977.01.T01 MTR_3g077110 55.932 118 51 1 1 118 1 117 2.75e-43 151
MsG0780040977.01.T01 MTR_2g067420 58.182 110 45 1 2 111 4 112 2.81e-43 150
MsG0780040977.01.T01 MTR_5g010020 57.658 111 46 1 1 111 1 110 2.95e-43 150
MsG0780040977.01.T01 MTR_2g089450 55.085 118 52 1 1 118 1 117 3.33e-43 148
MsG0780040977.01.T01 MTR_8g017500 51.852 135 58 2 1 135 1 128 4.15e-43 150
MsG0780040977.01.T01 MTR_8g017440 57.265 117 49 1 1 117 1 116 4.87e-43 150
MsG0780040977.01.T01 MTR_0008s0390 55.462 119 51 2 1 118 1 118 5.13e-43 148
MsG0780040977.01.T01 MTR_2g099740 55.462 119 52 1 1 119 1 118 7.26e-43 151
MsG0780040977.01.T01 MTR_8g017540 56.303 119 51 1 1 119 47 164 1.58e-42 150
MsG0780040977.01.T01 MTR_1g112760 56.034 116 50 1 3 118 4 118 2.89e-42 145
MsG0780040977.01.T01 MTR_7g111290 60.000 110 43 1 1 110 1 109 4.85e-42 149
MsG0780040977.01.T01 MTR_0008s0470 53.782 119 53 2 1 118 1 118 8.48e-42 145
MsG0780040977.01.T01 MTR_8g017390 53.782 119 55 0 1 119 1 119 1.28e-41 149
MsG0780040977.01.T01 MTR_4g485530 48.322 149 67 4 3 145 2 146 1.87e-41 142
MsG0780040977.01.T01 MTR_8g017340 53.782 119 55 0 1 119 1 119 6.26e-41 148
MsG0780040977.01.T01 MTR_3g052450 57.798 109 45 1 8 116 36 143 6.33e-41 148
MsG0780040977.01.T01 MTR_2g064160 51.515 132 57 2 6 137 5 129 1.44e-40 143
MsG0780040977.01.T01 MTR_0008s0280 53.043 115 53 1 1 115 1 114 6.66e-40 139
MsG0780040977.01.T01 MTR_8g017350 52.941 119 56 0 1 119 1 119 6.95e-40 147
MsG0780040977.01.T01 MTR_7g109320 55.000 120 53 1 1 120 1 119 8.47e-40 142
MsG0780040977.01.T01 MTR_1g100667 55.085 118 51 2 1 117 1 117 4.20e-39 138
MsG0780040977.01.T01 MTR_3g052430 57.009 107 45 1 10 116 39 144 5.23e-39 143
MsG0780040977.01.T01 MTR_2g089420 50.847 118 56 2 1 118 1 116 7.45e-39 142
MsG0780040977.01.T01 MTR_4g065017 33.214 280 135 8 12 280 17 255 1.06e-37 136
MsG0780040977.01.T01 MTR_6g006030 47.445 137 67 3 1 135 1 134 1.95e-37 132
MsG0780040977.01.T01 MTR_3g011610 48.031 127 60 2 12 138 37 157 4.64e-37 138
MsG0780040977.01.T01 MTR_5g042030 53.211 109 50 1 12 120 7 114 8.18e-37 132
MsG0780040977.01.T01 MTR_8g042410 46.212 132 65 2 12 143 37 162 9.29e-37 137
MsG0780040977.01.T01 MTR_0193s0090 40.964 166 93 2 12 177 7 167 1.22e-36 130
MsG0780040977.01.T01 MTR_2g097910 50.000 114 56 1 12 125 20 132 1.34e-36 133
MsG0780040977.01.T01 MTR_6g055910 55.455 110 48 1 7 116 9 117 1.36e-36 132
MsG0780040977.01.T01 MTR_4g100720 55.556 108 47 1 9 116 10 116 1.40e-36 129
MsG0780040977.01.T01 MTR_3g028740 51.818 110 52 1 8 117 18 126 3.61e-36 132
MsG0780040977.01.T01 MTR_7g035075 51.695 118 56 1 10 127 12 128 4.80e-36 128
MsG0780040977.01.T01 MTR_2g088170 49.206 126 63 1 9 134 26 150 7.40e-36 134
MsG0780040977.01.T01 MTR_5g079120 47.200 125 65 1 8 132 57 180 1.05e-35 130
MsG0780040977.01.T01 MTR_5g079290 53.704 108 49 1 12 119 17 123 3.72e-35 127
MsG0780040977.01.T01 MTR_0197s0010 55.769 104 45 1 17 120 6 108 5.22e-35 126
MsG0780040977.01.T01 MTR_8g020490 52.991 117 50 2 1 117 1 112 5.23e-35 127
MsG0780040977.01.T01 MTR_1g110460 39.691 194 104 5 12 199 26 212 5.50e-35 128
MsG0780040977.01.T01 MTR_5g079220 51.327 113 54 1 7 119 16 127 1.33e-34 126
MsG0780040977.01.T01 MTR_7g017260 48.227 141 66 3 12 146 25 164 1.56e-34 126
MsG0780040977.01.T01 MTR_0247s0040 56.311 103 44 1 12 114 7 108 2.11e-34 123
MsG0780040977.01.T01 MTR_1g073170 54.808 104 46 1 13 116 21 123 2.13e-34 125
MsG0780040977.01.T01 MTR_1g045610 53.846 104 47 1 13 116 22 124 5.48e-34 124
MsG0780040977.01.T01 MTR_1g062940 46.667 120 63 1 10 129 4 122 6.00e-34 123
MsG0780040977.01.T01 MTR_0001s0360 44.218 147 77 2 12 154 7 152 6.06e-34 124
MsG0780040977.01.T01 MTR_1g086530 49.558 113 56 1 8 120 29 140 7.94e-34 124
MsG0780040977.01.T01 MTR_5g078930 47.287 129 66 2 6 133 2 129 1.34e-33 122
MsG0780040977.01.T01 MTR_5g078800 53.271 107 49 1 12 118 7 112 1.43e-33 123
MsG0780040977.01.T01 MTR_5g078950 55.340 103 45 1 12 114 7 108 2.02e-33 123
MsG0780040977.01.T01 MTR_1g086510 51.304 115 55 1 2 116 11 124 2.47e-33 123
MsG0780040977.01.T01 MTR_5g078910 50.926 108 52 1 12 119 7 113 4.98e-33 123
MsG0780040977.01.T01 MTR_5g078860 52.336 107 50 1 12 118 7 112 1.19e-32 122
MsG0780040977.01.T01 MTR_3g045430 51.240 121 57 2 1 120 1 120 2.20e-32 121
MsG0780040977.01.T01 MTR_8g060940 54.902 102 45 1 12 113 7 107 4.77e-32 119
MsG0780040977.01.T01 MTR_1g083630 50.459 109 53 1 8 116 8 115 1.06e-31 124
MsG0780040977.01.T01 MTR_5g088080 50.467 107 51 2 10 115 10 115 2.32e-31 117
MsG0780040977.01.T01 MTR_5g088150 50.467 107 51 2 10 115 10 115 2.32e-31 117
MsG0780040977.01.T01 MTR_5g488210 50.467 107 51 2 10 115 10 115 2.32e-31 117
MsG0780040977.01.T01 MTR_5g088640 50.467 107 51 2 10 115 10 115 2.40e-31 118
MsG0780040977.01.T01 MTR_5g062790 49.533 107 52 2 10 115 7 112 2.70e-31 118
MsG0780040977.01.T01 MTR_5g488170 50.467 107 51 2 10 115 10 115 4.22e-31 116
MsG0780040977.01.T01 MTR_1g021230 47.222 108 56 1 12 119 57 163 1.39e-30 119
MsG0780040977.01.T01 MTR_2g033170 50.000 108 53 1 8 115 20 126 3.55e-30 116
MsG0780040977.01.T01 MTR_4g063100 48.077 104 53 1 13 116 8 110 4.16e-30 114
MsG0780040977.01.T01 MTR_2g096380 47.222 108 56 1 9 116 3 109 5.38e-30 113
MsG0780040977.01.T01 MTR_5g016510 50.485 103 49 2 14 116 5 105 1.88e-29 114
MsG0780040977.01.T01 MTR_5g088610 50.467 107 51 2 10 115 7 112 7.68e-29 113
MsG0780040977.01.T01 MTR_4g094982 44.167 120 65 2 14 133 5 122 8.17e-29 111
MsG0780040977.01.T01 MTR_4g029540 44.167 120 63 3 8 126 6 122 1.12e-28 111
MsG0780040977.01.T01 MTR_4g123040 49.074 108 54 1 8 115 20 126 2.34e-28 111
MsG0780040977.01.T01 MTR_5g007300 53.933 89 40 1 1 89 53 140 2.82e-28 106
MsG0780040977.01.T01 MTR_8g006470 47.706 109 55 2 8 115 6 113 2.95e-28 110
MsG0780040977.01.T01 MTR_3g101290 47.706 109 55 2 8 116 31 137 6.30e-27 105
MsG0780040977.01.T01 MTR_4g019370 46.602 103 53 2 14 116 38 138 3.83e-26 105
MsG0780040977.01.T01 MTR_6g015455 50.485 103 49 2 14 116 5 105 1.23e-25 107
MsG0780040977.01.T01 MTR_4g063100 55.556 72 32 0 45 116 10 81 1.24e-24 99.0
MsG0780040977.01.T01 MTR_4g128190 44.762 105 43 2 12 115 11 101 1.35e-24 99.4
MsG0780040977.01.T01 MTR_1g085880 50.943 106 49 3 12 115 11 115 1.43e-24 98.2
MsG0780040977.01.T01 MTR_2g096380 55.556 72 32 0 45 116 19 90 5.77e-24 97.1
MsG0780040977.01.T01 MTR_7g111290 63.077 65 24 0 46 110 3 67 6.30e-24 99.8
MsG0780040977.01.T01 MTR_6g055910 59.155 71 29 0 46 116 18 88 7.86e-24 97.8
MsG0780040977.01.T01 MTR_1g085770 50.943 106 49 3 12 115 11 115 8.58e-24 98.6
MsG0780040977.01.T01 MTR_5g070020 42.718 103 57 2 14 116 122 222 3.63e-22 95.1
MsG0780040977.01.T01 MTR_5g049190 27.706 231 161 4 8 235 13 240 5.92e-22 92.4
MsG0780040977.01.T01 MTR_6g074860 27.948 229 153 5 14 233 4 229 7.98e-22 92.0
MsG0780040977.01.T01 MTR_4g105660 40.741 108 62 2 9 116 175 280 5.25e-21 92.4
MsG0780040977.01.T01 MTR_4g082040 42.718 103 57 2 14 116 105 205 6.82e-21 92.0
MsG0780040977.01.T01 MTR_3g463400 36.486 148 85 6 1 145 119 260 9.81e-21 91.7
MsG0780040977.01.T01 MTR_5g041570 36.667 120 74 2 14 133 134 251 3.38e-20 90.1
MsG0780040977.01.T01 MTR_7g035350 40.594 101 58 2 11 111 222 320 1.31e-19 88.6
MsG0780040977.01.T01 MTR_5g082910 43.000 100 55 2 14 113 19 116 1.36e-19 86.7
MsG0780040977.01.T01 MTR_3g089045 38.532 109 65 2 8 116 10 116 2.18e-19 86.3
MsG0780040977.01.T01 MTR_6g027340 40.816 98 56 2 14 111 16 111 4.04e-19 84.0
MsG0780040977.01.T01 MTR_7g086960 34.302 172 100 5 14 185 89 247 6.43e-19 85.9
MsG0780040977.01.T01 MTR_3g077650 38.889 108 64 2 9 116 176 281 7.77e-19 86.3
MsG0780040977.01.T01 MTR_7g061330 42.308 104 58 2 14 117 113 214 8.91e-19 86.7
MsG0780040977.01.T01 MTR_7g461410 42.308 104 58 2 14 117 113 214 8.91e-19 86.7
MsG0780040977.01.T01 MTR_7g061330 42.308 104 58 2 14 117 77 178 1.07e-18 86.3
MsG0780040977.01.T01 MTR_7g037260 38.136 118 70 3 11 127 142 257 2.49e-18 84.3
MsG0780040977.01.T01 MTR_4g088015 37.190 121 73 3 10 129 217 335 2.89e-18 84.7
MsG0780040977.01.T01 MTR_6g027360 40.000 100 58 2 12 111 76 173 3.49e-18 83.2
MsG0780040977.01.T01 MTR_1g057980 39.623 106 56 2 9 111 75 175 5.82e-18 82.4
MsG0780040977.01.T01 MTR_7g451170 37.383 107 65 2 10 116 187 291 1.16e-17 82.8
MsG0780040977.01.T01 MTR_3g110028 38.462 104 62 2 14 117 85 186 2.20e-17 82.8
MsG0780040977.01.T01 MTR_0023s0210 49.333 75 37 1 8 82 3 76 2.98e-17 75.5
MsG0780040977.01.T01 MTR_1g026870 38.462 104 62 2 14 117 85 186 6.77e-17 81.3
MsG0780040977.01.T01 MTR_6g027370 37.864 103 62 2 14 116 99 199 1.27e-16 79.3
MsG0780040977.01.T01 MTR_7g037130 38.739 111 61 3 11 116 142 250 3.43e-16 78.2
MsG0780040977.01.T01 MTR_5g010650 42.268 97 54 2 14 110 110 204 4.19e-16 78.6
MsG0780040977.01.T01 MTR_8g468380 42.000 100 56 2 17 116 25 122 5.47e-16 77.8
MsG0780040977.01.T01 MTR_7g061550 28.079 203 124 4 17 197 10 212 3.74e-15 75.1
MsG0780040977.01.T01 MTR_5g038910 40.000 100 58 2 17 116 29 126 4.45e-15 75.5
MsG0780040977.01.T01 MTR_5g038910 40.000 100 58 2 17 116 29 126 6.15e-15 74.7
MsG0780040977.01.T01 MTR_7g450950 34.259 108 57 2 10 111 153 252 8.59e-15 73.9
MsG0780040977.01.T01 MTR_8g017480 54.717 53 23 1 1 53 1 52 1.10e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040977.01.T01 AT5G57620 79.832 119 24 0 1 119 1 119 2.86e-72 226
MsG0780040977.01.T01 AT2G36890 79.832 119 24 0 1 119 1 119 5.87e-72 224
MsG0780040977.01.T01 AT2G36890 79.832 119 24 0 1 119 42 160 1.14e-71 224
MsG0780040977.01.T01 AT5G65790 71.533 137 37 1 1 135 1 137 1.21e-71 225
MsG0780040977.01.T01 AT3G49690 78.814 118 25 0 1 118 1 118 2.24e-70 220
MsG0780040977.01.T01 AT5G23000 76.271 118 28 0 1 118 1 118 1.90e-68 216
MsG0780040977.01.T01 AT4G37780 74.790 119 30 0 1 119 1 119 3.24e-68 214
MsG0780040977.01.T01 AT5G56110 65.000 120 41 1 1 120 1 119 7.75e-55 180
MsG0780040977.01.T01 AT3G01140 60.606 132 46 2 1 127 1 131 1.44e-53 178
MsG0780040977.01.T01 AT5G15310 63.333 120 43 1 1 120 1 119 5.46e-53 173
MsG0780040977.01.T01 AT5G15310 58.993 139 55 2 1 139 1 137 8.29e-53 175
MsG0780040977.01.T01 AT5G15310 58.993 139 55 2 1 139 1 137 1.08e-52 174
MsG0780040977.01.T01 AT4G21440 60.833 120 46 1 1 120 1 119 6.48e-52 174
MsG0780040977.01.T01 AT4G05100 61.983 121 44 2 1 120 1 120 1.70e-51 172
MsG0780040977.01.T01 AT1G34670 61.667 120 45 1 1 120 1 119 1.87e-51 173
MsG0780040977.01.T01 AT4G28110 61.864 118 44 1 1 118 1 117 3.02e-51 170
MsG0780040977.01.T01 AT3G47600 62.602 123 45 1 1 123 1 122 3.36e-51 171
MsG0780040977.01.T01 AT5G16770 60.000 120 47 1 1 120 1 119 3.65e-51 171
MsG0780040977.01.T01 AT5G16770 60.000 120 47 1 1 120 1 119 3.65e-51 171
MsG0780040977.01.T01 AT3G02940 60.000 120 47 1 1 120 1 119 5.34e-51 170
MsG0780040977.01.T01 AT3G61250 60.000 120 47 1 1 120 1 119 8.18e-51 169
MsG0780040977.01.T01 AT5G16770 60.000 120 47 1 1 120 1 119 8.61e-51 170
MsG0780040977.01.T01 AT5G16770 60.000 120 47 1 1 120 1 119 8.61e-51 170
MsG0780040977.01.T01 AT1G35515 52.899 138 61 2 1 135 1 137 1.23e-50 166
MsG0780040977.01.T01 AT3G02940 60.000 120 47 1 1 120 1 119 1.26e-50 169
MsG0780040977.01.T01 AT3G02940 60.000 120 47 1 1 120 1 119 1.26e-50 169
MsG0780040977.01.T01 AT4G09460 45.198 177 89 3 1 170 1 176 2.03e-50 166
MsG0780040977.01.T01 AT3G01140 59.690 129 46 2 4 127 47 174 2.61e-50 171
MsG0780040977.01.T01 AT4G17785 61.983 121 44 2 1 120 1 120 5.08e-50 169
MsG0780040977.01.T01 AT1G22640 49.673 153 75 2 1 152 1 152 5.51e-50 166
MsG0780040977.01.T01 AT5G62470 60.976 123 47 1 1 123 1 122 5.52e-50 169
MsG0780040977.01.T01 AT4G17785 61.983 121 44 2 1 120 1 120 5.95e-50 169
MsG0780040977.01.T01 AT1G74650 61.667 120 45 1 1 120 1 119 6.41e-50 168
MsG0780040977.01.T01 AT5G65230 61.667 120 45 1 1 120 1 119 2.60e-49 166
MsG0780040977.01.T01 AT3G28910 58.594 128 52 1 1 128 1 127 3.30e-49 166
MsG0780040977.01.T01 AT5G60890 61.538 117 44 1 1 117 1 116 7.70e-49 164
MsG0780040977.01.T01 AT5G10280 58.333 120 49 1 1 120 1 119 1.42e-48 164
MsG0780040977.01.T01 AT5G62470 60.976 123 46 2 1 123 1 121 2.39e-48 164
MsG0780040977.01.T01 AT3G28470 64.865 111 38 1 1 111 1 110 2.79e-48 163
MsG0780040977.01.T01 AT4G38620 47.771 157 76 2 1 152 1 156 3.79e-48 162
MsG0780040977.01.T01 AT2G31180 59.829 117 46 1 1 117 1 116 6.87e-48 160
MsG0780040977.01.T01 AT1G08810 60.684 117 45 1 1 117 1 116 1.19e-47 160
MsG0780040977.01.T01 AT1G16490 52.288 153 68 3 2 152 4 153 1.40e-47 160
MsG0780040977.01.T01 AT2G16720 42.286 175 94 2 1 169 1 174 2.15e-47 159
MsG0780040977.01.T01 AT1G63910 54.074 135 60 2 1 135 1 133 3.53e-47 162
MsG0780040977.01.T01 AT5G61420 60.169 118 46 1 1 118 1 117 3.74e-47 162
MsG0780040977.01.T01 AT3G23250 57.265 117 49 1 1 117 1 116 3.89e-47 159
MsG0780040977.01.T01 AT1G79180 59.483 116 46 1 2 117 4 118 7.88e-47 159
MsG0780040977.01.T01 AT4G12350 50.323 155 75 2 1 154 1 154 7.91e-47 159
MsG0780040977.01.T01 AT5G26660 58.974 117 47 1 1 117 1 116 2.06e-46 159
MsG0780040977.01.T01 AT1G56160 59.483 116 46 1 2 117 4 118 2.12e-46 158
MsG0780040977.01.T01 AT5G07690 59.322 118 47 1 1 118 1 117 5.74e-46 158
MsG0780040977.01.T01 AT1G06180 59.829 117 46 1 1 117 1 116 5.86e-46 155
MsG0780040977.01.T01 AT1G18570 58.824 119 47 2 1 118 1 118 6.14e-46 158
MsG0780040977.01.T01 AT4G34990 56.780 118 50 1 1 118 1 117 8.63e-46 155
MsG0780040977.01.T01 AT5G54230 60.000 120 47 1 1 120 1 119 1.98e-45 156
MsG0780040977.01.T01 AT4G01680 58.974 117 47 1 1 117 1 116 2.87e-45 153
MsG0780040977.01.T01 AT4G22680 57.500 120 50 1 1 120 1 119 4.68e-45 153
MsG0780040977.01.T01 AT4G01680 58.974 117 47 1 1 117 1 116 5.94e-45 155
MsG0780040977.01.T01 AT1G57560 58.475 118 48 1 1 118 1 117 7.77e-45 154
MsG0780040977.01.T01 AT1G57560 58.475 118 48 1 1 118 1 117 8.56e-45 153
MsG0780040977.01.T01 AT1G66230 50.676 148 67 2 1 143 1 147 1.33e-44 153
MsG0780040977.01.T01 AT5G49330 55.000 120 53 1 1 120 1 119 3.36e-44 153
MsG0780040977.01.T01 AT1G74080 40.183 219 105 6 1 217 1 195 5.49e-44 152
MsG0780040977.01.T01 AT5G07700 58.475 118 48 1 1 118 1 117 5.85e-44 152
MsG0780040977.01.T01 AT5G07700 58.475 118 48 1 1 118 1 117 5.85e-44 152
MsG0780040977.01.T01 AT3G13890 56.303 119 51 1 1 119 1 118 6.42e-44 153
MsG0780040977.01.T01 AT5G16600 57.500 120 50 1 1 120 1 119 9.40e-44 152
MsG0780040977.01.T01 AT1G09540 58.120 117 48 1 1 117 1 116 1.17e-43 152
MsG0780040977.01.T01 AT5G14340 56.410 117 50 1 1 117 13 128 1.30e-43 150
MsG0780040977.01.T01 AT3G62610 55.556 117 51 1 1 117 1 116 1.42e-43 152
MsG0780040977.01.T01 AT3G13540 53.913 115 52 1 4 118 15 128 3.47e-43 148
MsG0780040977.01.T01 AT5G62320 41.026 195 90 4 2 187 3 181 1.01e-42 147
MsG0780040977.01.T01 AT3G12820 56.034 116 50 1 3 118 5 119 1.60e-42 146
MsG0780040977.01.T01 AT2G47460 46.000 150 70 4 1 147 1 142 1.96e-42 149
MsG0780040977.01.T01 AT4G01680 53.488 129 47 2 1 117 1 128 1.85e-41 146
MsG0780040977.01.T01 AT3G13890 52.344 128 51 2 1 119 1 127 6.87e-41 145
MsG0780040977.01.T01 AT3G12720 53.509 114 52 1 6 119 16 128 2.05e-40 142
MsG0780040977.01.T01 AT1G18710 52.991 117 54 1 1 117 1 116 3.55e-40 141
MsG0780040977.01.T01 AT1G79180 46.309 149 46 2 2 117 4 151 3.64e-40 142
MsG0780040977.01.T01 AT1G74430 53.846 117 53 1 1 117 1 116 1.44e-39 139
MsG0780040977.01.T01 AT2G32460 50.806 124 60 1 12 135 18 140 5.02e-39 143
MsG0780040977.01.T01 AT2G32460 50.806 124 60 1 12 135 6 128 5.67e-39 142
MsG0780040977.01.T01 AT5G40330 36.923 195 94 3 13 207 13 178 6.40e-39 136
MsG0780040977.01.T01 AT5G06100 39.713 209 105 5 8 201 28 230 8.38e-39 141
MsG0780040977.01.T01 AT5G52600 58.333 108 44 1 9 116 9 115 1.49e-38 134
MsG0780040977.01.T01 AT5G06100 39.713 209 105 5 8 201 28 230 2.48e-38 141
MsG0780040977.01.T01 AT5G06100 39.713 209 105 5 8 201 28 230 2.48e-38 141
MsG0780040977.01.T01 AT5G06100 39.713 209 105 5 8 201 28 230 2.48e-38 141
MsG0780040977.01.T01 AT5G06100 39.713 209 105 5 8 201 28 230 2.48e-38 141
MsG0780040977.01.T01 AT5G14750 56.190 105 45 1 13 117 17 120 4.32e-38 134
MsG0780040977.01.T01 AT3G27810 40.556 180 95 4 9 178 17 194 1.11e-37 133
MsG0780040977.01.T01 AT3G27920 54.206 107 48 1 13 119 15 120 3.10e-37 132
MsG0780040977.01.T01 AT5G12870 53.211 109 50 1 12 120 18 125 4.59e-37 133
MsG0780040977.01.T01 AT4G26930 44.000 150 69 5 12 152 19 162 2.03e-36 134
MsG0780040977.01.T01 AT5G35550 41.139 158 89 2 9 163 11 167 2.80e-36 130
MsG0780040977.01.T01 AT3G11440 50.450 111 54 1 9 119 38 147 5.24e-36 134
MsG0780040977.01.T01 AT5G55020 51.887 106 50 1 12 117 26 130 6.68e-36 135
MsG0780040977.01.T01 AT3G01530 48.361 122 57 2 8 124 21 141 7.62e-36 128
MsG0780040977.01.T01 AT3G11440 50.450 111 54 1 9 119 38 147 1.80e-35 134
MsG0780040977.01.T01 AT3G11440 50.450 111 54 1 9 119 38 147 1.80e-35 134
MsG0780040977.01.T01 AT3G11440 50.450 111 54 1 9 119 38 147 1.80e-35 134
MsG0780040977.01.T01 AT3G08500 51.818 110 52 1 8 117 26 134 2.04e-35 130
MsG0780040977.01.T01 AT5G40350 41.143 175 96 3 10 179 15 187 2.44e-35 127
MsG0780040977.01.T01 AT1G48000 43.537 147 80 2 12 156 32 177 7.63e-35 126
MsG0780040977.01.T01 AT5G52260 52.542 118 55 1 1 118 1 117 2.87e-34 125
MsG0780040977.01.T01 AT1G66370 51.724 116 51 2 1 116 1 111 3.40e-34 124
MsG0780040977.01.T01 AT4G13480 55.769 104 45 1 13 116 7 109 5.26e-34 124
MsG0780040977.01.T01 AT3G48920 45.238 126 68 1 9 134 15 139 5.66e-34 124
MsG0780040977.01.T01 AT2G26960 50.467 107 52 1 9 115 17 122 6.82e-34 128
MsG0780040977.01.T01 AT4G25560 53.774 106 48 1 13 118 11 115 1.96e-33 124
MsG0780040977.01.T01 AT3G24310 53.846 104 47 1 13 116 19 121 2.11e-33 123
MsG0780040977.01.T01 AT1G25340 51.786 112 53 1 10 121 16 126 4.50e-33 122
MsG0780040977.01.T01 AT3G30210 54.369 103 46 1 13 115 28 129 5.22e-33 122
MsG0780040977.01.T01 AT1G66380 47.619 126 60 2 12 137 8 127 7.25e-33 118
MsG0780040977.01.T01 AT1G56650 43.590 156 77 3 12 162 8 157 1.22e-32 120
MsG0780040977.01.T01 AT1G68320 49.091 110 55 1 12 121 19 127 1.27e-31 119
MsG0780040977.01.T01 AT1G66390 54.286 105 47 1 12 116 8 111 1.41e-31 118
MsG0780040977.01.T01 AT2G47190 46.789 109 57 1 8 116 16 123 3.85e-30 115
MsG0780040977.01.T01 AT3G06490 50.926 108 52 1 8 115 15 121 4.98e-30 115
MsG0780040977.01.T01 AT3G53200 46.610 118 62 1 12 129 9 125 2.92e-29 111
MsG0780040977.01.T01 AT5G67300 47.788 113 57 2 10 122 2 112 3.55e-29 113
MsG0780040977.01.T01 AT5G59780 48.077 104 53 1 13 116 9 111 4.18e-29 111
MsG0780040977.01.T01 AT5G26660 60.811 74 29 0 44 117 12 85 4.78e-29 113
MsG0780040977.01.T01 AT3G46130 48.077 104 53 1 13 116 10 112 5.20e-29 111
MsG0780040977.01.T01 AT1G25340 49.107 112 51 2 10 121 16 121 1.30e-28 110
MsG0780040977.01.T01 AT3G50060 50.467 107 51 2 10 116 2 106 1.35e-28 111
MsG0780040977.01.T01 AT5G49620 49.074 108 54 1 8 115 22 128 1.36e-28 111
MsG0780040977.01.T01 AT5G14750 58.228 79 30 1 39 117 11 86 2.27e-28 107
MsG0780040977.01.T01 AT1G25340 49.107 112 51 2 10 121 16 121 2.40e-28 110
MsG0780040977.01.T01 AT3G47600 63.291 79 29 0 45 123 38 116 2.60e-28 111
MsG0780040977.01.T01 AT4G37260 49.515 103 50 2 14 116 13 113 1.68e-27 108
MsG0780040977.01.T01 AT2G26950 43.269 104 58 1 9 112 13 115 1.74e-27 110
MsG0780040977.01.T01 AT3G60460 46.296 108 56 2 9 115 8 114 2.94e-27 107
MsG0780040977.01.T01 AT2G23290 49.515 103 50 2 14 116 13 113 1.02e-26 106
MsG0780040977.01.T01 AT3G27810 38.194 144 78 3 45 178 3 145 1.15e-26 103
MsG0780040977.01.T01 AT5G35550 41.406 128 72 1 39 163 43 170 1.30e-25 102
MsG0780040977.01.T01 AT3G53200 51.163 86 42 0 44 129 7 92 5.38e-25 99.8
MsG0780040977.01.T01 AT5G49620 43.443 122 54 2 8 115 22 142 5.50e-25 102
MsG0780040977.01.T01 AT3G55730 47.573 103 52 2 14 116 56 156 1.23e-24 102
MsG0780040977.01.T01 AT1G66380 51.613 93 40 1 45 137 7 94 1.33e-24 95.5
MsG0780040977.01.T01 AT5G59780 54.795 73 33 0 44 116 18 90 1.66e-24 98.6
MsG0780040977.01.T01 AT5G40350 55.405 74 33 0 45 118 4 77 2.55e-24 96.7
MsG0780040977.01.T01 AT3G46130 54.795 73 33 0 44 116 18 90 3.07e-24 98.2
MsG0780040977.01.T01 AT3G09230 43.810 105 57 2 14 118 55 157 1.01e-23 99.8
MsG0780040977.01.T01 AT1G18960 42.742 124 63 4 1 124 1 116 1.11e-23 98.6
MsG0780040977.01.T01 AT3G46130 56.338 71 31 0 46 116 10 80 1.20e-23 96.7
MsG0780040977.01.T01 AT3G12820 57.143 70 30 0 49 118 2 71 1.93e-23 95.1
MsG0780040977.01.T01 AT1G17950 29.130 230 136 8 14 226 5 224 2.34e-23 96.3
MsG0780040977.01.T01 AT3G27785 37.500 152 79 5 9 156 184 323 2.68e-23 99.0
MsG0780040977.01.T01 AT2G39880 45.631 103 54 2 14 116 50 150 2.95e-23 98.2
MsG0780040977.01.T01 AT1G69560 42.202 109 61 2 9 117 102 208 9.44e-23 96.3
MsG0780040977.01.T01 AT1G69560 42.202 109 61 2 9 117 118 224 1.30e-22 96.3
MsG0780040977.01.T01 AT5G40360 35.507 138 86 3 12 149 156 290 6.17e-22 94.4
MsG0780040977.01.T01 AT5G11050 36.522 115 71 2 11 125 102 214 6.51e-21 92.0
MsG0780040977.01.T01 AT4G18770 37.226 137 77 4 9 145 212 339 6.94e-21 92.0
MsG0780040977.01.T01 AT2G25230 42.056 107 60 2 9 115 21 125 1.04e-20 89.0
MsG0780040977.01.T01 AT5G58850 37.500 112 68 2 11 122 102 211 2.49e-20 90.5
MsG0780040977.01.T01 AT5G17800 33.889 180 108 5 14 193 93 261 3.25e-20 89.0
MsG0780040977.01.T01 AT1G26780 40.777 103 59 2 14 116 98 198 4.71e-20 87.8
MsG0780040977.01.T01 AT1G73410 42.718 103 57 2 14 116 6 106 4.96e-20 87.0
MsG0780040977.01.T01 AT1G26780 40.777 103 59 2 14 116 98 198 6.02e-20 89.0
MsG0780040977.01.T01 AT1G22640 41.053 95 55 1 59 152 1 95 8.71e-20 85.5
MsG0780040977.01.T01 AT3G09370 42.718 103 57 2 14 116 135 235 1.01e-19 89.4
MsG0780040977.01.T01 AT3G09370 42.718 103 57 2 14 116 130 230 1.10e-19 89.0
MsG0780040977.01.T01 AT1G73410 42.718 103 57 2 14 116 6 106 1.19e-19 85.1
MsG0780040977.01.T01 AT3G09370 42.718 103 57 2 14 116 143 243 1.33e-19 89.0
MsG0780040977.01.T01 AT1G71030 52.174 69 33 0 52 120 5 73 1.71e-19 84.3
MsG0780040977.01.T01 AT1G71030 52.174 69 33 0 52 120 19 87 2.03e-19 84.3
MsG0780040977.01.T01 AT1G66380 46.429 84 44 1 12 95 8 90 2.51e-19 81.6
MsG0780040977.01.T01 AT5G02320 41.346 104 59 2 14 117 127 228 4.59e-19 87.4
MsG0780040977.01.T01 AT5G02320 41.346 104 59 2 14 117 127 228 4.59e-19 87.4
MsG0780040977.01.T01 AT3G29020 38.462 104 62 2 14 117 65 166 4.60e-19 84.3
MsG0780040977.01.T01 AT5G02320 41.346 104 59 2 14 117 67 168 6.01e-19 87.0
MsG0780040977.01.T01 AT3G29020 38.462 104 62 2 14 117 67 168 9.16e-19 84.7
MsG0780040977.01.T01 AT4G33450 37.037 108 66 2 9 116 14 119 6.10e-18 81.6
MsG0780040977.01.T01 AT5G14750 54.237 59 27 0 59 117 1 59 1.48e-17 77.8
MsG0780040977.01.T01 AT5G14750 54.237 59 27 0 59 117 1 59 1.48e-17 77.8
MsG0780040977.01.T01 AT5G11510 37.500 104 63 2 14 117 81 182 3.74e-17 82.0
MsG0780040977.01.T01 AT5G11510 37.500 104 63 2 14 117 81 182 3.74e-17 82.0
MsG0780040977.01.T01 AT5G11510 37.500 104 63 2 14 117 81 182 3.74e-17 82.0
MsG0780040977.01.T01 AT5G11510 37.500 104 63 2 14 117 81 182 4.19e-17 81.6
MsG0780040977.01.T01 AT5G11510 37.500 104 63 2 14 117 81 182 4.30e-17 81.6
MsG0780040977.01.T01 AT4G32730 37.500 104 63 2 14 117 87 188 6.93e-17 81.3
MsG0780040977.01.T01 AT4G32730 37.500 104 63 2 14 117 87 188 7.52e-17 81.3
MsG0780040977.01.T01 AT4G32730 37.500 104 63 2 14 117 87 188 7.52e-17 81.3
MsG0780040977.01.T01 AT4G32730 37.500 104 63 2 14 117 87 188 7.52e-17 81.3
MsG0780040977.01.T01 AT4G32730 37.500 104 63 2 14 117 87 188 7.52e-17 81.3
MsG0780040977.01.T01 AT5G40430 37.383 107 64 2 9 115 49 152 1.09e-16 78.2
MsG0780040977.01.T01 AT1G14350 42.000 100 56 2 17 116 28 125 2.57e-16 79.0
MsG0780040977.01.T01 AT1G14350 42.000 100 56 2 17 116 28 125 2.57e-16 79.0
MsG0780040977.01.T01 AT2G02820 41.000 100 57 2 17 116 33 130 4.68e-16 78.2
MsG0780040977.01.T01 AT3G23250 52.542 59 28 0 59 117 1 59 4.99e-16 75.9
MsG0780040977.01.T01 AT2G02820 41.000 100 57 2 17 116 33 130 6.35e-16 77.8
MsG0780040977.01.T01 AT2G02820 41.000 100 57 2 17 116 33 130 6.46e-16 77.0
MsG0780040977.01.T01 AT4G00540 35.185 108 67 2 12 117 101 207 3.50e-14 72.4
MsG0780040977.01.T01 AT4G00540 35.185 108 67 2 12 117 99 205 5.29e-14 72.0
MsG0780040977.01.T01 AT5G39700 35.780 109 68 2 9 117 51 157 4.13e-13 67.0
MsG0780040977.01.T01 AT2G37630 34.021 97 61 2 17 111 7 102 1.81e-12 67.4
MsG0780040977.01.T01 AT3G18100 30.282 142 81 3 12 153 544 667 4.20e-11 63.9
MsG0780040977.01.T01 AT3G18100 30.282 142 81 3 12 153 496 619 4.40e-11 63.9
MsG0780040977.01.T01 AT3G18100 30.496 141 80 3 13 153 384 506 5.12e-11 63.5
MsG0780040977.01.T01 AT3G18100 30.496 141 80 3 13 153 332 454 6.98e-11 63.2

Find 40 sgRNAs with CRISPR-Local

Find 88 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTAATGCTGGTAGTGTTAA+TGG 0.223530 7:-85111559 MsG0780040977.01.T01:CDS
GATCTATGACATGGCTGATT+TGG 0.304205 7:+85111689 None:intergenic
ATAATAGCATCCAAGTTAAA+AGG 0.341708 7:-85112021 MsG0780040977.01.T01:CDS
CTGGTAGTGTTAATGGATTA+TGG 0.348044 7:-85111552 MsG0780040977.01.T01:CDS
AACTCTCCATGCTTAATGTT+TGG 0.375083 7:+85112696 None:intergenic
TGCACCCTCTTTGCTAGCAT+TGG 0.383188 7:-85112648 MsG0780040977.01.T01:CDS
CAAGAGCTTGTTGAAGGAAA+TGG 0.411712 7:-85111667 MsG0780040977.01.T01:CDS
TGGTAGTGTTAATGGATTAT+GGG 0.425610 7:-85111551 MsG0780040977.01.T01:CDS
TCATACGATGATCACTCTAA+TGG 0.429336 7:-85111832 MsG0780040977.01.T01:CDS
AACATGGAACTGGAGGAAAC+TGG 0.440894 7:-85112933 MsG0780040977.01.T01:CDS
ACAATGATGTAAAGAACTAC+TGG 0.442145 7:-85111990 MsG0780040977.01.T01:CDS
CGCGGAATGAGAATGATTCA+TGG 0.466557 7:+85111939 None:intergenic
CACTCAGGTTTGACAAGGTG+TGG 0.467373 7:-85112756 MsG0780040977.01.T01:intron
GATAAAAGGGTAACTTGTTG+AGG 0.488023 7:+85111907 None:intergenic
TACATAGAGAAACATGGAAC+TGG 0.488674 7:-85112943 MsG0780040977.01.T01:CDS
ATAGATCAAGAGCTTGTTGA+AGG 0.495465 7:-85111673 MsG0780040977.01.T01:CDS
GACAAAGCTAATGTAAAGAA+AGG 0.502939 7:-85113003 MsG0780040977.01.T01:CDS
ACTTGATGATGTAGATGAGT+AGG 0.504140 7:+85111786 None:intergenic
TCTAATGGATCTTTCAGTAC+AGG 0.506455 7:-85111817 MsG0780040977.01.T01:CDS
TGAAGAAGATACAAAACTAA+AGG 0.507207 7:-85112968 MsG0780040977.01.T01:CDS
AAGTTAATGTTCTCTAATGC+TGG 0.520204 7:-85111571 MsG0780040977.01.T01:CDS
TCTTTGCTAGCATTGGAAGC+AGG 0.522442 7:-85112641 MsG0780040977.01.T01:intron
GCTTCCAATGCTAGCAAAGA+GGG 0.543801 7:+85112644 None:intergenic
CTCAGACCAAACATTAAGCA+TGG 0.563901 7:-85112702 MsG0780040977.01.T01:CDS
GTATCTTCTTCAGGAGACCA+TGG 0.566687 7:+85112979 None:intergenic
GCAAGAGTTGTAGACTTCGA+TGG 0.573779 7:-85112734 MsG0780040977.01.T01:CDS
ACATTAGCTTTGTCACAGCA+AGG 0.580858 7:+85113012 None:intergenic
TTGTCTGTGAATGATAATGA+TGG 0.604791 7:+85111856 None:intergenic
CATGAATCATTCTCATTCCG+CGG 0.604897 7:-85111938 MsG0780040977.01.T01:CDS
CAAGCTCTTGATCTATGACA+TGG 0.614668 7:+85111680 None:intergenic
TCATCTATATCATAATCCAA+TGG 0.614704 7:+85111520 None:intergenic
TGCTTCCAATGCTAGCAAAG+AGG 0.618336 7:+85112643 None:intergenic
ATTATGGGGAGAAAATCCAT+TGG 0.620139 7:-85111536 MsG0780040977.01.T01:CDS
CTAATGTAAAGAAAGGTCCA+TGG 0.630839 7:-85112996 MsG0780040977.01.T01:CDS
ATAGAGAAACATGGAACTGG+AGG 0.632919 7:-85112940 MsG0780040977.01.T01:CDS
TGATTACATCTACAGTGAGG+TGG 0.656607 7:-85111605 MsG0780040977.01.T01:CDS
AAGGAGTACATAGAGAAACA+TGG 0.660933 7:-85112949 MsG0780040977.01.T01:CDS
GGTAGTGTTAATGGATTATG+GGG 0.672882 7:-85111550 MsG0780040977.01.T01:CDS
TTGTTGAGGTTTCATCTCCG+CGG 0.707736 7:+85111921 None:intergenic
TGTTGATTACATCTACAGTG+AGG 0.727616 7:-85111608 MsG0780040977.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACTATATATATTATATGAT+TGG + Chr7:85111609-85111628 None:intergenic 10.0%
!! AATGTTAAAACTTACATTAT+TGG - Chr7:85112397-85112416 MsG0780040977.01.T01:intron 15.0%
!! AGTAAAAAGATATATGTATT+TGG + Chr7:85112149-85112168 None:intergenic 15.0%
!! TATGATATGATATATATGAA+TGG - Chr7:85111648-85111667 MsG0780040977.01.T01:CDS 15.0%
!!! AAACTAGTTTATAATAAAAG+TGG + Chr7:85112008-85112027 None:intergenic 15.0%
!!! ATCTTATTTTTCTCTTCAAT+TGG + Chr7:85111952-85111971 None:intergenic 20.0%
! ATAATAGCATCCAAGTTAAA+AGG - Chr7:85112456-85112475 MsG0780040977.01.T01:intron 25.0%
! CAAGCTTAAGAAAAAGATTA+TGG - Chr7:85112515-85112534 MsG0780040977.01.T01:intron 25.0%
! TAAAACTTTCCAATACTTCT+TGG + Chr7:85111981-85112000 None:intergenic 25.0%
! TCATCTATATCATAATCCAA+TGG + Chr7:85112960-85112979 None:intergenic 25.0%
! TGAAGAAGATACAAAACTAA+AGG - Chr7:85111509-85111528 MsG0780040977.01.T01:CDS 25.0%
!! ATCTTAATTTGAAATGCATG+AGG + Chr7:85112361-85112380 None:intergenic 25.0%
!! CATAATCTTTTTCTTAAGCT+TGG + Chr7:85112517-85112536 None:intergenic 25.0%
!! TACTTATATTTAAGACACGA+GGG - Chr7:85112165-85112184 MsG0780040977.01.T01:intron 25.0%
!! TATATTGTTTTCATCCTTCA+TGG + Chr7:85111921-85111940 None:intergenic 25.0%
!! TGGTAAATTTAGAATACTAG+CGG + Chr7:85112108-85112127 None:intergenic 25.0%
!! TTACTTATATTTAAGACACG+AGG - Chr7:85112164-85112183 MsG0780040977.01.T01:intron 25.0%
!!! ATGATTTTGTTGAGTTTTGA+AGG + Chr7:85112599-85112618 None:intergenic 25.0%
!!! ATGTACTAACCAACTTTTTT+TGG + Chr7:85111579-85111598 None:intergenic 25.0%
!!! TTTAGTTTTGTATCTTCTTC+AGG + Chr7:85111510-85111529 None:intergenic 25.0%
!!! TTTTTGCTATTACTCTTAGT+GGG + Chr7:85112768-85112787 None:intergenic 25.0%
AAGTTAATGTTCTCTAATGC+TGG - Chr7:85112906-85112925 MsG0780040977.01.T01:intron 30.0%
ACAATGATGTAAAGAACTAC+TGG - Chr7:85112487-85112506 MsG0780040977.01.T01:intron 30.0%
ATTAAGATCTTGATCTTGAG+TGG - Chr7:85112373-85112392 MsG0780040977.01.T01:intron 30.0%
ATTACTCTGCCAAAAAAAGT+TGG - Chr7:85111567-85111586 MsG0780040977.01.T01:CDS 30.0%
CAATCAGAAAAACATGACAA+AGG + Chr7:85111689-85111708 None:intergenic 30.0%
GACAAAGCTAATGTAAAGAA+AGG - Chr7:85111474-85111493 MsG0780040977.01.T01:CDS 30.0%
GATCCATATTCAAAAGAATG+CGG - Chr7:85112225-85112244 MsG0780040977.01.T01:intron 30.0%
! CTTCATGGAAGCATAAAAAA+TGG + Chr7:85111906-85111925 None:intergenic 30.0%
! TCAAAATTTTCACAAAGTGC+AGG - Chr7:85112427-85112446 MsG0780040977.01.T01:intron 30.0%
! TTGTCTGTGAATGATAATGA+TGG + Chr7:85112624-85112643 None:intergenic 30.0%
!! TGGTAGTGTTAATGGATTAT+GGG - Chr7:85112926-85112945 MsG0780040977.01.T01:CDS 30.0%
!! TTGTGATTATTTTTCCACTC+AGG - Chr7:85111706-85111725 MsG0780040977.01.T01:CDS 30.0%
!!! AGTTTTGAAGGATGGATAAA+AGG + Chr7:85112587-85112606 None:intergenic 30.0%
!!! CATTTTTTATGCTTCCATGA+AGG - Chr7:85111904-85111923 MsG0780040977.01.T01:CDS 30.0%
!!! GTTTTGAAGGATGGATAAAA+GGG + Chr7:85112586-85112605 None:intergenic 30.0%
!!! GTTTTTGCTATTACTCTTAG+TGG + Chr7:85112769-85112788 None:intergenic 30.0%
!!! TTTTGTTGAGTTTTGAAGGA+TGG + Chr7:85112595-85112614 None:intergenic 30.0%
AACTCTCCATGCTTAATGTT+TGG + Chr7:85111784-85111803 None:intergenic 35.0%
ATTATGGGGAGAAAATCCAT+TGG - Chr7:85112941-85112960 MsG0780040977.01.T01:CDS 35.0%
CATTTACGCAGTTGTGAATA+TGG + Chr7:85112278-85112297 None:intergenic 35.0%
CTAATGTAAAGAAAGGTCCA+TGG - Chr7:85111481-85111500 MsG0780040977.01.T01:CDS 35.0%
GATCTCTGATCAAGATCAAA+CGG - Chr7:85112251-85112270 MsG0780040977.01.T01:intron 35.0%
TACATAGAGAAACATGGAAC+TGG - Chr7:85111534-85111553 MsG0780040977.01.T01:CDS 35.0%
TCATACGATGATCACTCTAA+TGG - Chr7:85112645-85112664 MsG0780040977.01.T01:CDS 35.0%
! AAATTTTCACAAAGTGCAGG+TGG - Chr7:85112430-85112449 MsG0780040977.01.T01:intron 35.0%
! AAGGAGTACATAGAGAAACA+TGG - Chr7:85111528-85111547 MsG0780040977.01.T01:CDS 35.0%
! ACATCATCAAGTCTTTTGAG+TGG - Chr7:85112702-85112721 MsG0780040977.01.T01:CDS 35.0%
! AGACCGCATTCTTTTGAATA+TGG + Chr7:85112231-85112250 None:intergenic 35.0%
! GCAGAGAATCTCTTTTATCT+CGG + Chr7:85112068-85112087 None:intergenic 35.0%
! GGTCTAATTGTAGACTAGTT+TGG + Chr7:85112128-85112147 None:intergenic 35.0%
! TCTAATGCTGGTAGTGTTAA+TGG - Chr7:85112918-85112937 MsG0780040977.01.T01:CDS 35.0%
! TCTAATGGATCTTTCAGTAC+AGG - Chr7:85112660-85112679 MsG0780040977.01.T01:CDS 35.0%
! TGTTGATTACATCTACAGTG+AGG - Chr7:85112869-85112888 MsG0780040977.01.T01:intron 35.0%
!! ACTTGATGATGTAGATGAGT+AGG + Chr7:85112694-85112713 None:intergenic 35.0%
!! ATAGATCAAGAGCTTGTTGA+AGG - Chr7:85112804-85112823 MsG0780040977.01.T01:intron 35.0%
!! CTGGTAGTGTTAATGGATTA+TGG - Chr7:85112925-85112944 MsG0780040977.01.T01:CDS 35.0%
!! GATAAAAGGGTAACTTGTTG+AGG + Chr7:85112573-85112592 None:intergenic 35.0%
!! GGTAGTGTTAATGGATTATG+GGG - Chr7:85112927-85112946 MsG0780040977.01.T01:CDS 35.0%
ATAGAGAAACATGGAACTGG+AGG - Chr7:85111537-85111556 MsG0780040977.01.T01:CDS 40.0%
CAAGCTCTTGATCTATGACA+TGG + Chr7:85112800-85112819 None:intergenic 40.0%
CAGAGAATCTGAATCCAAAC+TGG + Chr7:85112041-85112060 None:intergenic 40.0%
CAGTTTGGATTCAGATTCTC+TGG - Chr7:85112039-85112058 MsG0780040977.01.T01:intron 40.0%
CATGAATCATTCTCATTCCG+CGG - Chr7:85112539-85112558 MsG0780040977.01.T01:intron 40.0%
CTCAGACCAAACATTAAGCA+TGG - Chr7:85111775-85111794 MsG0780040977.01.T01:CDS 40.0%
GATCTATGACATGGCTGATT+TGG + Chr7:85112791-85112810 None:intergenic 40.0%
TGAGAGGAGATTCCACATTT+CGG + Chr7:85112197-85112216 None:intergenic 40.0%
TGATTACATCTACAGTGAGG+TGG - Chr7:85112872-85112891 MsG0780040977.01.T01:intron 40.0%
! GATCATGCACCAAGAAGTAT+TGG - Chr7:85111969-85111988 MsG0780040977.01.T01:CDS 40.0%
! GTTTAAGTGAAGTGCCAGTT+TGG - Chr7:85112024-85112043 MsG0780040977.01.T01:CDS 40.0%
! TTTTCCACTCAGGTTTGACA+AGG - Chr7:85111716-85111735 MsG0780040977.01.T01:CDS 40.0%
!! ACATTAGCTTTGTCACAGCA+AGG + Chr7:85111468-85111487 None:intergenic 40.0%
!! CAAGAGCTTGTTGAAGGAAA+TGG - Chr7:85112810-85112829 MsG0780040977.01.T01:intron 40.0%
!! GTCAGTTCTGCCTTTTAACT+TGG + Chr7:85112469-85112488 None:intergenic 40.0%
AACATGGAACTGGAGGAAAC+TGG - Chr7:85111544-85111563 MsG0780040977.01.T01:CDS 45.0%
CGCGGAATGAGAATGATTCA+TGG + Chr7:85112541-85112560 None:intergenic 45.0%
GCAAGAGTTGTAGACTTCGA+TGG - Chr7:85111743-85111762 MsG0780040977.01.T01:CDS 45.0%
GCTTCCAATGCTAGCAAAGA+GGG + Chr7:85111836-85111855 None:intergenic 45.0%
GTATCTTCTTCAGGAGACCA+TGG + Chr7:85111501-85111520 None:intergenic 45.0%
TATGGATCGTCCAATCTGAG+AGG + Chr7:85112213-85112232 None:intergenic 45.0%
TGCTTCCAATGCTAGCAAAG+AGG + Chr7:85111837-85111856 None:intergenic 45.0%
TGTGGAATCTCCTCTCAGAT+TGG - Chr7:85112200-85112219 MsG0780040977.01.T01:intron 45.0%
TTGTTGAGGTTTCATCTCCG+CGG + Chr7:85112559-85112578 None:intergenic 45.0%
! TCTTTGCTAGCATTGGAAGC+AGG - Chr7:85111836-85111855 MsG0780040977.01.T01:CDS 45.0%
CACACCTTGTCAAACCTGAG+TGG + Chr7:85111723-85111742 None:intergenic 50.0%
CACTCAGGTTTGACAAGGTG+TGG - Chr7:85111721-85111740 MsG0780040977.01.T01:CDS 50.0%
CGAGGGAGTAAACCGAAATG+TGG - Chr7:85112182-85112201 MsG0780040977.01.T01:intron 50.0%
TGCACCCTCTTTGCTAGCAT+TGG - Chr7:85111829-85111848 MsG0780040977.01.T01:CDS 50.0%
Chromosome Type Strat End Strand Name
Chr7 gene 85111453 85113046 85111453 ID=MsG0780040977.01;Name=MsG0780040977.01
Chr7 mRNA 85111453 85113046 85111453 ID=MsG0780040977.01.T01;Parent=MsG0780040977.01;Name=MsG0780040977.01.T01;_AED=0.33;_eAED=0.33;_QI=0|0|0|1|1|1|3|0|287
Chr7 exon 85112911 85113046 85112911 ID=MsG0780040977.01.T01:exon:11718;Parent=MsG0780040977.01.T01
Chr7 exon 85112642 85112771 85112642 ID=MsG0780040977.01.T01:exon:11717;Parent=MsG0780040977.01.T01
Chr7 exon 85111453 85112050 85111453 ID=MsG0780040977.01.T01:exon:11716;Parent=MsG0780040977.01.T01
Chr7 CDS 85112911 85113046 85112911 ID=MsG0780040977.01.T01:cds;Parent=MsG0780040977.01.T01
Chr7 CDS 85112642 85112771 85112642 ID=MsG0780040977.01.T01:cds;Parent=MsG0780040977.01.T01
Chr7 CDS 85111453 85112050 85111453 ID=MsG0780040977.01.T01:cds;Parent=MsG0780040977.01.T01
Gene Sequence

>MsG0780040977.01.T01

ATGGGAAGATCTCCTTGCTGTGACAAAGCTAATGTAAAGAAAGGTCCATGGTCTCCTGAAGAAGATACAAAACTAAAGGAGTACATAGAGAAACATGGAACTGGAGGAAACTGGATTACTCTGCCAAAAAAAGTTGGTTTGACAAGGTGTGGCAAGAGTTGTAGACTTCGATGGCTTAACTATCTCAGACCAAACATTAAGCATGGAGAGTTCTCTGACTCTGAAGATAAAATAATATGCACCCTCTTTGCTAGCATTGGAAGCAGGTGGTCAATAATAGCATCCAAGTTAAAAGGCAGAACTGACAATGATGTAAAGAACTACTGGAACACCAAGCTTAAGAAAAAGATTATGGCCATGAATCATTCTCATTCCGCGGAGATGAAACCTCAACAAGTTACCCTTTTATCCATCCTTCAAAACTCAACAAAATCATCTCCATCATTATCATTCACAGACAACTCATACGATGATCACTCTAATGGATCTTTCAGTACAGGTTCAATCTCCTACTCATCTACATCATCAAGTCTTTTGAGTGGAAATTCTTCTACTTCTGCAGCACAAGAAAGTTTCATTAGTCCCACTAAGAGTAATAGCAAAAACCAAATCAGCCATGTCATAGATCAAGAGCTTGTTGAAGGAAATGGTGATGCAACTTTTGTAGAGCAGAATAATATTGATTCTGTTGATTACATCTACAGTGAGGTGGAAGATAGTGAGAAGTTAATGTTCTCTAATGCTGGTAGTGTTAATGGATTATGGGGAGAAAATCCATTGGATTATGATATAGATGAAATTAAACAGCTAATAAACACTACTGCATCTACTAGTAGTTGCAACAACTTTTTGTTTGTTGACTAA

Protein sequence

>MsG0780040977.01.T01

MGRSPCCDKANVKKGPWSPEEDTKLKEYIEKHGTGGNWITLPKKVGLTRCGKSCRLRWLNYLRPNIKHGEFSDSEDKIICTLFASIGSRWSIIASKLKGRTDNDVKNYWNTKLKKKIMAMNHSHSAEMKPQQVTLLSILQNSTKSSPSLSFTDNSYDDHSNGSFSTGSISYSSTSSSLLSGNSSTSAAQESFISPTKSNSKNQISHVIDQELVEGNGDATFVEQNNIDSVDYIYSEVEDSEKLMFSNAGSVNGLWGENPLDYDIDEIKQLINTTASTSSCNNFLFVD*