AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010019.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010019.01.T01 MTR_2g076490 86.486 111 12 1 17 124 27 137 7.18e-65 204
MsG0280010019.01.T01 MTR_2g076590 86.486 111 12 1 17 124 27 137 2.02e-64 202
MsG0280010019.01.T01 MTR_2g076650 81.818 99 18 0 33 131 13 111 2.58e-54 171
MsG0280010019.01.T01 MTR_2g076610 86.538 52 7 0 76 127 19 70 1.66e-24 95.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010019.01.T01 AT1G78830 62.136 103 34 1 27 124 36 138 8.00e-39 135
MsG0280010019.01.T01 AT1G78850 57.143 105 43 1 26 130 38 140 5.04e-35 125
MsG0280010019.01.T01 AT1G78860 57.143 105 43 1 26 130 38 140 2.03e-34 124
MsG0280010019.01.T01 AT1G78820 53.000 100 42 1 30 124 39 138 1.77e-31 116
MsG0280010019.01.T01 AT1G16905 53.000 100 47 0 27 126 36 135 2.15e-31 115

Find 38 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAAGGCACAACACCTTTAT+TGG 0.165594 2:-62944858 None:intergenic
GGCAACCCAGTTGGTGAAAA+TGG 0.249330 2:+62944758 MsG0280010019.01.T01:CDS
AATAAAGGTGTTGTGCCTTT+AGG 0.286549 2:+62944860 MsG0280010019.01.T01:CDS
TCCCCGTCTCCGACGGGTTC+AGG 0.324781 2:-62939185 None:intergenic
GAGCTAGAGTGAAGGCATTT+GGG 0.333114 2:-62944676 None:intergenic
CAAACAAACACTTCCAATAA+AGG 0.333204 2:+62944845 MsG0280010019.01.T01:CDS
AGAGCTAGAGTGAAGGCATT+TGG 0.342324 2:-62944677 None:intergenic
GGACCATTCATAGTAGAATA+TGG 0.369527 2:+62944590 MsG0280010019.01.T01:CDS
TTTGAAAATTCAGGTGAACT+TGG 0.414357 2:+62944569 MsG0280010019.01.T01:intron
TGCCTTTAGGTACTCTCAAA+TGG 0.435379 2:+62944873 MsG0280010019.01.T01:CDS
ATTCAATTTCTCATCCCTGC+TGG 0.452646 2:+62939212 MsG0280010019.01.T01:CDS
TACCTGAACCCGTCGGAGAC+GGG 0.461973 2:+62939183 MsG0280010019.01.T01:CDS
AATCTCGTCCCCGTCTCCGA+CGG 0.487875 2:-62939192 None:intergenic
TTCAATTTCTCATCCCTGCT+GGG 0.492002 2:+62939213 MsG0280010019.01.T01:CDS
ATCTCGTCCCCGTCTCCGAC+GGG 0.494421 2:-62939191 None:intergenic
CCTCCATATTCTACTATGAA+TGG 0.498115 2:-62944593 None:intergenic
TTCAATGCTCCATTCCAAGT+TGG 0.505787 2:+62944638 MsG0280010019.01.T01:CDS
TACTCGTACTCATACCCAGC+AGG 0.514870 2:-62939227 None:intergenic
CTTCACTCTAGCTCTTCGTA+TGG 0.520995 2:+62944685 MsG0280010019.01.T01:CDS
ATGCTGATGGAAGAATTGTT+TGG 0.528512 2:+62944822 MsG0280010019.01.T01:CDS
CTTGTGTTGGCTAATGCTGA+TGG 0.532407 2:+62944809 MsG0280010019.01.T01:CDS
TTCACTCTAGCTCTTCGTAT+GGG 0.552284 2:+62944686 MsG0280010019.01.T01:CDS
TTGTAGAAACCAACTTGGAA+TGG 0.552949 2:-62944647 None:intergenic
ATACCTGAACCCGTCGGAGA+CGG 0.568840 2:+62939182 MsG0280010019.01.T01:CDS
ACCTGAACCCGTCGGAGACG+GGG 0.572725 2:+62939184 MsG0280010019.01.T01:CDS
AGCTAGAGTGAAGGCATTTG+GGG 0.572876 2:-62944675 None:intergenic
GCTGGGTATGAGTACGAGTA+CGG 0.595927 2:+62939230 MsG0280010019.01.T01:CDS
TGCTGATGGAAATCTTGTGT+TGG 0.597497 2:+62944796 MsG0280010019.01.T01:CDS
GCAAATAGAGGCAACCCAGT+TGG 0.604835 2:+62944749 MsG0280010019.01.T01:CDS
TATTTGCTTCCCATACCCAC+CGG 0.610134 2:-62944733 None:intergenic
TACCATTTGAGAGTACCTAA+AGG 0.610477 2:-62944875 None:intergenic
TGGGTATGGGAAGCAAATAG+AGG 0.619163 2:+62944737 MsG0280010019.01.T01:CDS
TAGTGTTGTAGAAACCAACT+TGG 0.633624 2:-62944652 None:intergenic
TCGTATGGGACTTCAACGAT+CGG 0.655449 2:+62944700 MsG0280010019.01.T01:CDS
ACTCGTACTCATACCCAGCA+GGG 0.686003 2:-62939226 None:intergenic
CATACGAAGAGCTAGAGTGA+AGG 0.697030 2:-62944684 None:intergenic
CCATTCATAGTAGAATATGG+AGG 0.699892 2:+62944593 MsG0280010019.01.T01:CDS
GATGAGATACCTGAACCCGT+CGG 0.703039 2:+62939176 MsG0280010019.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACTAAGTATTTAAATATT+CGG - Chr2:62943810-62943829 None:intergenic 10.0%
!! TGTAAATATAAAAAAAAATG+AGG + Chr2:62940708-62940727 MsG0280010019.01.T01:intron 10.0%
!!! AAAATAAGTTTAAAGTATTA+TGG - Chr2:62944051-62944070 None:intergenic 10.0%
!!! ATTTAATTCAATTTTTCTAT+CGG + Chr2:62941350-62941369 MsG0280010019.01.T01:intron 10.0%
!!! GTTTTTTTGAATTTTTTTAA+CGG + Chr2:62942906-62942925 MsG0280010019.01.T01:intron 10.0%
!!! TTTTTTTTTCTTTTTTTTTC+AGG - Chr2:62942213-62942232 None:intergenic 10.0%
!! AAAAATTCAAAAAAACGTTA+AGG - Chr2:62942902-62942921 None:intergenic 15.0%
!! AACTAAGTATTTAAATATTC+GGG - Chr2:62943809-62943828 None:intergenic 15.0%
!! AATCTGGAAAAAAATAAATT+AGG + Chr2:62942638-62942657 MsG0280010019.01.T01:intron 15.0%
!! ATTAATATCTGAAGAATTAA+TGG + Chr2:62939860-62939879 MsG0280010019.01.T01:intron 15.0%
!! TTAATATCTGAAGAATTAAT+GGG + Chr2:62939861-62939880 MsG0280010019.01.T01:intron 15.0%
!! TTTAAAGATTGAATTATTCT+TGG - Chr2:62941387-62941406 None:intergenic 15.0%
!!! AAACAAGTTTTTTTAGTTAA+GGG + Chr2:62942970-62942989 MsG0280010019.01.T01:intron 15.0%
!!! AACAATCTTTTTTTTACTTA+AGG - Chr2:62941997-62942016 None:intergenic 15.0%
!!! AACTTTTTTTTTTTTTCTTG+AGG + Chr2:62940327-62940346 MsG0280010019.01.T01:intron 15.0%
!!! AAGTAAAAAAAAGATTGTTT+TGG + Chr2:62941998-62942017 MsG0280010019.01.T01:intron 15.0%
!!! ACAATCTTTTTTTTACTTAA+GGG - Chr2:62941996-62942015 None:intergenic 15.0%
!!! ATCATACTAATATTTCTTTT+AGG - Chr2:62943045-62943064 None:intergenic 15.0%
!!! ATTTGGACTATATTTTATTT+CGG + Chr2:62939795-62939814 MsG0280010019.01.T01:intron 15.0%
!!! TGTAAAAAATAATGTCATTT+AGG - Chr2:62939491-62939510 None:intergenic 15.0%
!!! TTATTTTTTACACTAACAAA+AGG + Chr2:62939499-62939518 MsG0280010019.01.T01:intron 15.0%
!! AACCAAATGATAAATTGTTT+GGG - Chr2:62939413-62939432 None:intergenic 20.0%
!! AAGCAATTAATTATATCAAG+CGG - Chr2:62941027-62941046 None:intergenic 20.0%
!! AAGTACTATATAGAAGTTAA+TGG - Chr2:62944316-62944335 None:intergenic 20.0%
!! AATTCTCTCATTATTGAAAA+TGG - Chr2:62943502-62943521 None:intergenic 20.0%
!! ACCTTTAAATTTGAAAATTC+AGG + Chr2:62944560-62944579 MsG0280010019.01.T01:intron 20.0%
!! ATAACAATATCATGTCTTAT+AGG + Chr2:62940933-62940952 MsG0280010019.01.T01:intron 20.0%
!! ATGAAAAGGAAAAAAAATCT+GGG + Chr2:62942804-62942823 MsG0280010019.01.T01:intron 20.0%
!! ATGTTTATGAATGGAAAAAT+TGG + Chr2:62942731-62942750 MsG0280010019.01.T01:intron 20.0%
!! ATTCTCTCATTATTGAAAAT+GGG - Chr2:62943501-62943520 None:intergenic 20.0%
!! CAAATTTAATTATCCAAACT+AGG + Chr2:62941318-62941337 MsG0280010019.01.T01:intron 20.0%
!! CTACAACTACTAAATTAATT+GGG - Chr2:62939456-62939475 None:intergenic 20.0%
!! CTATTTATTTGGTATTACTT+TGG - Chr2:62942997-62943016 None:intergenic 20.0%
!! GACATATAATAAAACACAAA+CGG - Chr2:62940422-62940441 None:intergenic 20.0%
!! GATACCAAATAATAACTTAA+GGG - Chr2:62941965-62941984 None:intergenic 20.0%
!! GTTATTATTTAACTACTACT+AGG - Chr2:62941651-62941670 None:intergenic 20.0%
!! TAATATCTGAAGAATTAATG+GGG + Chr2:62939862-62939881 MsG0280010019.01.T01:intron 20.0%
!! TCAATAATGAGAGAATTTAA+GGG + Chr2:62943505-62943524 MsG0280010019.01.T01:intron 20.0%
!! TCTCTCAAAAACTTAAATAT+TGG - Chr2:62943191-62943210 None:intergenic 20.0%
!! TTAATTGTTACAAAGATGAT+TGG - Chr2:62939697-62939716 None:intergenic 20.0%
!! TTCAATAATGAGAGAATTTA+AGG + Chr2:62943504-62943523 MsG0280010019.01.T01:intron 20.0%
!!! AATTTAAAGGTTTCATTTTG+TGG - Chr2:62944551-62944570 None:intergenic 20.0%
!!! ACCTGAATTTTCAAATTTAA+AGG - Chr2:62944564-62944583 None:intergenic 20.0%
!!! ATATTTTGAACACAAACAAT+GGG + Chr2:62941530-62941549 MsG0280010019.01.T01:intron 20.0%
!!! ATTTAAATATTCGGGTTTTA+GGG - Chr2:62943801-62943820 None:intergenic 20.0%
!!! CAAACAAGTTTTTTTAGTTA+AGG + Chr2:62942969-62942988 MsG0280010019.01.T01:intron 20.0%
!!! CGTTTTTTGATTAAAACTAA+CGG - Chr2:62942062-62942081 None:intergenic 20.0%
!!! CTTTCTTGATAATTAATTTC+AGG + Chr2:62942509-62942528 MsG0280010019.01.T01:intron 20.0%
!!! TATATAGAAGTTAATGGATT+TGG - Chr2:62944310-62944329 None:intergenic 20.0%
!!! TATATCTTTTTAGCTTTAGA+AGG + Chr2:62941728-62941747 MsG0280010019.01.T01:intron 20.0%
!!! TATGTGAATTTTGATATTGA+TGG - Chr2:62944441-62944460 None:intergenic 20.0%
!!! TATTTAAATATTCGGGTTTT+AGG - Chr2:62943802-62943821 None:intergenic 20.0%
!!! TGAGAGAATGTTTTTATTAT+TGG + Chr2:62943204-62943223 MsG0280010019.01.T01:intron 20.0%
!!! TGTTTAATTTTTGACACTTA+AGG + Chr2:62940857-62940876 MsG0280010019.01.T01:intron 20.0%
!!! TTAGTTTTGAATATGAATGA+AGG - Chr2:62942336-62942355 None:intergenic 20.0%
!!! TTCTTTATTTTCCAGAAAAT+GGG - Chr2:62942173-62942192 None:intergenic 20.0%
! AAATAACTAATCTCCTAGTT+TGG - Chr2:62941334-62941353 None:intergenic 25.0%
! AATTATCAAGAAAGTGACTT+TGG - Chr2:62942503-62942522 None:intergenic 25.0%
! ACCAAATGATAAATTGTTTG+GGG - Chr2:62939412-62939431 None:intergenic 25.0%
! ATAAGATTAACTTTACCACT+TGG + Chr2:62940672-62940691 MsG0280010019.01.T01:intron 25.0%
! ATAGGTAATATATGGGAATT+GGG + Chr2:62939255-62939274 MsG0280010019.01.T01:intron 25.0%
! ATTCTTGGATGAAATAATTC+TGG - Chr2:62939376-62939395 None:intergenic 25.0%
! CAACCAAATGATAAATTGTT+TGG - Chr2:62939414-62939433 None:intergenic 25.0%
! CAATAATGAGAGAATTTAAG+GGG + Chr2:62943506-62943525 MsG0280010019.01.T01:intron 25.0%
! CGATACCAAATAATAACTTA+AGG - Chr2:62941966-62941985 None:intergenic 25.0%
! GATGAAAAGGAAAAAAAATC+TGG + Chr2:62942803-62942822 MsG0280010019.01.T01:intron 25.0%
! GCTACAACTACTAAATTAAT+TGG - Chr2:62939457-62939476 None:intergenic 25.0%
! GTGTATTTGATAAGACAATT+TGG + Chr2:62941284-62941303 MsG0280010019.01.T01:intron 25.0%
! GTTATATTCAACTTAAGTGT+CGG + Chr2:62941834-62941853 MsG0280010019.01.T01:intron 25.0%
! TAATCAATACGTAAACAATG+AGG + Chr2:62944075-62944094 MsG0280010019.01.T01:intron 25.0%
! TGATTTGATGAAGTATAAGT+TGG - Chr2:62940114-62940133 None:intergenic 25.0%
! TGGTCTCTTAACTATTTATT+TGG - Chr2:62943008-62943027 None:intergenic 25.0%
! TTAATTCCTGTAAAATTTGC+TGG + Chr2:62939536-62939555 MsG0280010019.01.T01:intron 25.0%
! TTATAATAACCTAACCTCAA+TGG - Chr2:62940656-62940675 None:intergenic 25.0%
! TTGAAAGAGATGTTTATGAA+TGG + Chr2:62942722-62942741 MsG0280010019.01.T01:intron 25.0%
! TTTCCAGATTCAATAACAAT+GGG - Chr2:62942628-62942647 None:intergenic 25.0%
! TTTGATTAAAACTAACGGAA+GGG - Chr2:62942057-62942076 None:intergenic 25.0%
!! ATCAAATCAAAGCTATTTCA+AGG + Chr2:62940125-62940144 MsG0280010019.01.T01:intron 25.0%
!! ATCTCTTCTAAAAAATGCAT+TGG - Chr2:62941068-62941087 None:intergenic 25.0%
!! ATTTGTTGAAGATGATGAAA+AGG + Chr2:62942790-62942809 MsG0280010019.01.T01:intron 25.0%
!! CATACATTTTCTTTCTTTCA+CGG - Chr2:62941889-62941908 None:intergenic 25.0%
!! CCATGTTTTCAATTTTCAAT+CGG + Chr2:62940157-62940176 MsG0280010019.01.T01:intron 25.0%
!! GGAAATAGATATGAAGATTT+TGG + Chr2:62942659-62942678 MsG0280010019.01.T01:intron 25.0%
!! TAATTCCTGTAAAATTTGCT+GGG + Chr2:62939537-62939556 MsG0280010019.01.T01:intron 25.0%
!! TTATTGTTTGTTCTTGTTGT+TGG - Chr2:62942242-62942261 None:intergenic 25.0%
!! TTTAAGATGGTCAAAGATTT+AGG - Chr2:62940393-62940412 None:intergenic 25.0%
!! TTTTCCAGATTCAATAACAA+TGG - Chr2:62942629-62942648 None:intergenic 25.0%
!!! ATGCAATTTGAAGTCTATTT+TGG + Chr2:62939636-62939655 MsG0280010019.01.T01:intron 25.0%
!!! ATTGATTTTGTCATCCAAAA+AGG + Chr2:62940980-62940999 MsG0280010019.01.T01:intron 25.0%
!!! ATTTTGGTTGATTTGCTTTA+GGG + Chr2:62942675-62942694 MsG0280010019.01.T01:intron 25.0%
!!! GAAAATGGAACTTTTTCATT+AGG + Chr2:62944773-62944792 MsG0280010019.01.T01:CDS 25.0%
!!! GAAGATGATTTGATTTTGTT+TGG - Chr2:62942309-62942328 None:intergenic 25.0%
!!! GAAGTCTATTTTGGTTATAT+TGG + Chr2:62939645-62939664 MsG0280010019.01.T01:intron 25.0%
!!! GATATTTTGAACACAAACAA+TGG + Chr2:62941529-62941548 MsG0280010019.01.T01:intron 25.0%
!!! GATGTGTTTTGATATATGTT+GGG - Chr2:62944419-62944438 None:intergenic 25.0%
!!! GTTCAGTCTTTTTTTTTTTG+TGG + Chr2:62943858-62943877 MsG0280010019.01.T01:intron 25.0%
!!! GTTCTTTATTTTCCAGAAAA+TGG - Chr2:62942174-62942193 None:intergenic 25.0%
!!! TCTTTATTTTCCAGAAAATG+GGG - Chr2:62942172-62942191 None:intergenic 25.0%
!!! TGTGAATGTTTTGAAGATTT+GGG + Chr2:62942594-62942613 MsG0280010019.01.T01:intron 25.0%
!!! TTGTGAATGTTTTGAAGATT+TGG + Chr2:62942593-62942612 MsG0280010019.01.T01:intron 25.0%
!!! TTTAAATATTCGGGTTTTAG+GGG - Chr2:62943800-62943819 None:intergenic 25.0%
!!! TTTTGATTAAAACTAACGGA+AGG - Chr2:62942058-62942077 None:intergenic 25.0%
!!! TTTTTTTGTCTTAGATGAAG+TGG - Chr2:62941219-62941238 None:intergenic 25.0%
AAAAGACTGAACAGTTCAAA+TGG - Chr2:62943850-62943869 None:intergenic 30.0%
AAAGGAAAAAAAATCTGGGT+TGG + Chr2:62942808-62942827 MsG0280010019.01.T01:intron 30.0%
AACAATTGCATGAGCAATTA+AGG - Chr2:62944528-62944547 None:intergenic 30.0%
ACCTCAGAAAAATTGGAAAT+CGG + Chr2:62942415-62942434 MsG0280010019.01.T01:intron 30.0%
ACTAACAAAGTCTACATTCA+GGG - Chr2:62943419-62943400 None:intergenic 30.0%
AGACATGATATTGTTATGCA+CGG - Chr2:62940930-62940949 None:intergenic 30.0%
ATATCATTTCATGATTGTCG+TGG + Chr2:62943094-62943113 MsG0280010019.01.T01:intron 30.0%
ATTGAGGTATATACTTGCAA+GGG - Chr2:62940003-62940022 None:intergenic 30.0%
CAAACAAACACTTCCAATAA+AGG + Chr2:62944845-62944864 MsG0280010019.01.T01:CDS 30.0%
CATAAAATATACAAGGTCCA+GGG - Chr2:62943899-62943918 None:intergenic 30.0%
CCAAATGATAAATTGTTTGG+GGG - Chr2:62939411-62939430 None:intergenic 30.0%
CCGATTGAAAATTGAAAACA+TGG - Chr2:62940160-62940179 None:intergenic 30.0%
CTTCAACTTTGGATTCAATT+GGG + Chr2:62942445-62942464 MsG0280010019.01.T01:intron 30.0%
CTTCTATATAGTACTTGAGT+TGG + Chr2:62944320-62944339 MsG0280010019.01.T01:intron 30.0%
GAAACAAGAACAAAAAGAGA+AGG - Chr2:62941769-62941788 None:intergenic 30.0%
GAACAATAAAGTGAGAAATG+AGG - Chr2:62944492-62944511 None:intergenic 30.0%
GACGATGCATAAAATATACA+AGG - Chr2:62943906-62943925 None:intergenic 30.0%
GATAGGTAATATATGGGAAT+TGG + Chr2:62939254-62939273 MsG0280010019.01.T01:intron 30.0%
GGATTTAATGGTCAAAGATT+TGG - Chr2:62941559-62941578 None:intergenic 30.0%
GTTATTATTTGGTATCGCTT+TGG + Chr2:62941969-62941988 MsG0280010019.01.T01:intron 30.0%
TAAATTTCAGAATTGAGCTG+AGG - Chr2:62940086-62940105 None:intergenic 30.0%
TACGGTGATAGGTAATATAT+GGG + Chr2:62939248-62939267 MsG0280010019.01.T01:intron 30.0%
TAGGTAATATATGGGAATTG+GGG + Chr2:62939256-62939275 MsG0280010019.01.T01:intron 30.0%
TAGTATTCATCCATGTTAGA+AGG - Chr2:62944383-62944402 None:intergenic 30.0%
TCAATCTACCTCAGAAAAAT+TGG + Chr2:62942408-62942427 MsG0280010019.01.T01:intron 30.0%
TCGTCCCTTAAGTTATTATT+TGG + Chr2:62941958-62941977 MsG0280010019.01.T01:intron 30.0%
TCTTCAACTTTGGATTCAAT+TGG + Chr2:62942444-62942463 MsG0280010019.01.T01:intron 30.0%
TCTTCTACATAGAGTTCAAA+AGG + Chr2:62940904-62940923 MsG0280010019.01.T01:intron 30.0%
TGTCTTATCAAATACACCAA+AGG - Chr2:62941281-62941300 None:intergenic 30.0%
TTGCAATTTATCTGCATTCA+GGG + Chr2:62943428-62943447 MsG0280010019.01.T01:intron 30.0%
TTGCAATTTATCTGCATTCA+GGG - Chr2:62943447-62943428 None:intergenic 30.0%
TTGCATATTATCTGCATTCA+GGG - Chr2:62943279-62943298 None:intergenic 30.0%
TTTGAAAATTCAGGTGAACT+TGG + Chr2:62944569-62944588 MsG0280010019.01.T01:intron 30.0%
TTTGCAATTTATCTGCATTC+AGG + Chr2:62943427-62943446 MsG0280010019.01.T01:intron 30.0%
TTTGCAATTTATCTGCATTC+AGG - Chr2:62943446-62943427 None:intergenic 30.0%
TTTGCAATTTCTCTCATTCA+GGG + Chr2:62943727-62943746 MsG0280010019.01.T01:intron 30.0%
TTTGCATATTATCTGCATTC+AGG - Chr2:62943280-62943299 None:intergenic 30.0%
! AAAGTGAGAAATGAGGTTTT+GGG - Chr2:62944485-62944504 None:intergenic 30.0%
! ATGTGTGAGTTTAATTTCAG+TGG + Chr2:62941189-62941208 MsG0280010019.01.T01:intron 30.0%
! TAAAGTGAGAAATGAGGTTT+TGG - Chr2:62944486-62944505 None:intergenic 30.0%
! TTTATCTCCGTTACATGTTT+TGG + Chr2:62942030-62942049 MsG0280010019.01.T01:intron 30.0%
! TTTCCCATTGTTATTGAATC+TGG + Chr2:62942622-62942641 MsG0280010019.01.T01:intron 30.0%
! TTTTGCAATTTCTCTCATTC+AGG + Chr2:62943726-62943745 MsG0280010019.01.T01:intron 30.0%
!! AAGTTAATGGATTTGGATCT+AGG - Chr2:62944303-62944322 None:intergenic 30.0%
!! GCTTAATGTAGCTTACTTTT+AGG - Chr2:62941481-62941500 None:intergenic 30.0%
!!! CAAACGGATAAGTTTTAAGA+TGG - Chr2:62940406-62940425 None:intergenic 30.0%
!!! CAGTCTTTTTTTTTTTGTGG+TGG + Chr2:62943861-62943880 MsG0280010019.01.T01:intron 30.0%
!!! CTTTATTTTCCAGAAAATGG+GGG - Chr2:62942171-62942190 None:intergenic 30.0%
!!! CTTTTTAGCTTTAGAAGGTT+TGG + Chr2:62941733-62941752 MsG0280010019.01.T01:intron 30.0%
!!! GATTTTGGTTGATTTGCTTT+AGG + Chr2:62942674-62942693 MsG0280010019.01.T01:intron 30.0%
!!! GGATGTGTTTTGATATATGT+TGG - Chr2:62944420-62944439 None:intergenic 30.0%
!!! TTTTTTTCAGGAAAGTGTTG+TGG - Chr2:62942201-62942220 None:intergenic 30.0%
!!! TTTTTTTTTTGTGGTGGTCA+AGG + Chr2:62943867-62943886 MsG0280010019.01.T01:intron 30.0%
AAAATATAAGCCAAGTCAGC+AGG - Chr2:62941580-62941599 None:intergenic 35.0%
AAAGCAAAACTAACGACCTT+TGG + Chr2:62941262-62941281 MsG0280010019.01.T01:intron 35.0%
AATATCTGCCATTCCATTTC+TGG - Chr2:62941515-62941534 None:intergenic 35.0%
AATTGCATGAGCAATTAAGG+TGG - Chr2:62944525-62944544 None:intergenic 35.0%
ACAAGAACAAAAAGAGAAGG+AGG - Chr2:62941766-62941785 None:intergenic 35.0%
ACCTAGCATACAAACTGTAA+TGG - Chr2:62940231-62940250 None:intergenic 35.0%
ACTAACGAAGTCTACATTCA+GGG + Chr2:62943336-62943355 MsG0280010019.01.T01:intron 35.0%
ACTCTATGTAGAAGATCAAC+AGG - Chr2:62940899-62940918 None:intergenic 35.0%
ATCCATGTTAGAAGGTTAGA+AGG - Chr2:62944375-62944394 None:intergenic 35.0%
ATCGTGAGGTAAGTATAGTT+TGG + Chr2:62939350-62939369 MsG0280010019.01.T01:intron 35.0%
ATGCTGATGGAAGAATTGTT+TGG + Chr2:62944822-62944841 MsG0280010019.01.T01:CDS 35.0%
ATTACAGTTTGTATGCTAGG+TGG + Chr2:62940230-62940249 MsG0280010019.01.T01:intron 35.0%
CATTGAGGTATATACTTGCA+AGG - Chr2:62940004-62940023 None:intergenic 35.0%
CCATTCATAGTAGAATATGG+AGG + Chr2:62944593-62944612 MsG0280010019.01.T01:CDS 35.0%
CCCCCAAACAATTTATCATT+TGG + Chr2:62939408-62939427 MsG0280010019.01.T01:intron 35.0%
CCTCCATATTCTACTATGAA+TGG - Chr2:62944596-62944615 None:intergenic 35.0%
CTTCATGAACACAACATTCA+TGG - Chr2:62940960-62940979 None:intergenic 35.0%
GACTAACAAAGTCTACATTC+AGG + Chr2:62943399-62943418 MsG0280010019.01.T01:intron 35.0%
GACTAACAAAGTCTACATTC+AGG - Chr2:62943418-62943399 None:intergenic 35.0%
GCATAAAATATACAAGGTCC+AGG - Chr2:62943900-62943919 None:intergenic 35.0%
GGACCATTCATAGTAGAATA+TGG + Chr2:62944590-62944609 MsG0280010019.01.T01:CDS 35.0%
GGATTTGGATCTAGGTTTAA+TGG - Chr2:62944295-62944314 None:intergenic 35.0%
GTACGGTGATAGGTAATATA+TGG + Chr2:62939247-62939266 MsG0280010019.01.T01:intron 35.0%
TAAACTCACACATAACTGTG+AGG - Chr2:62941182-62941201 None:intergenic 35.0%
TAATATATGGGAATTGGGGA+CGG + Chr2:62939260-62939279 MsG0280010019.01.T01:intron 35.0%
TACCTTCTAACCTTCTAACA+TGG + Chr2:62944370-62944389 MsG0280010019.01.T01:intron 35.0%
TAGTGTTGTAGAAACCAACT+TGG - Chr2:62944655-62944674 None:intergenic 35.0%
TCAGGGACTAAATTGACTAA+CGG + Chr2:62943353-62943372 MsG0280010019.01.T01:intron 35.0%
TGAGATACATGGCTTGAATT+TGG + Chr2:62939778-62939797 MsG0280010019.01.T01:intron 35.0%
TGATGAAGATCATGAAGAAG+AGG + Chr2:62942842-62942861 MsG0280010019.01.T01:intron 35.0%
TTCATCCAAGAATCAAACTC+AGG + Chr2:62939383-62939402 MsG0280010019.01.T01:intron 35.0%
TTGTAGAAACCAACTTGGAA+TGG - Chr2:62944650-62944669 None:intergenic 35.0%
TTTCACCACTTGTGAGATTA+GGG + Chr2:62940731-62940750 MsG0280010019.01.T01:intron 35.0%
! AAAGTTCCATTTTCACCAAC+TGG - Chr2:62944767-62944786 None:intergenic 35.0%
! AACTTGTTTGTCAGACATTG+CGG + Chr2:62941406-62941425 MsG0280010019.01.T01:intron 35.0%
! AAGTGAGAAATGAGGTTTTG+GGG - Chr2:62944484-62944503 None:intergenic 35.0%
! AAGTTCCATTTTCACCAACT+GGG - Chr2:62944766-62944785 None:intergenic 35.0%
! CAATGATGTGTTCGAGTTTA+TGG - Chr2:62940363-62940382 None:intergenic 35.0%
! TAAAGGCACAACACCTTTAT+TGG - Chr2:62944861-62944880 None:intergenic 35.0%
! TGTTGTTGTTGCTGCTTATT+GGG - Chr2:62942271-62942290 None:intergenic 35.0%
! TTGTTGTTGTTGCTGCTTAT+TGG - Chr2:62942272-62942291 None:intergenic 35.0%
! TTTAACTTCGTCTCAACGTT+TGG + Chr2:62939596-62939615 MsG0280010019.01.T01:intron 35.0%
! TTTAGGCTTAAATGCGCTTT+TGG - Chr2:62943028-62943047 None:intergenic 35.0%
! TTTATCTCCGTTACCTGTTT+TGG - Chr2:62942938-62942957 None:intergenic 35.0%
!! AATAAAGGTGTTGTGCCTTT+AGG + Chr2:62944860-62944879 MsG0280010019.01.T01:CDS 35.0%
!! ACCGATTTCCAATTTTTCTG+AGG - Chr2:62942419-62942438 None:intergenic 35.0%
!! ACTTTGGTGCTAAATCCAAT+TGG - Chr2:62942487-62942506 None:intergenic 35.0%
!! CTTTGGTGCTAAATCCAATT+GGG - Chr2:62942486-62942505 None:intergenic 35.0%
!! GGATCTAGGTTTAATGGATT+TGG - Chr2:62944289-62944308 None:intergenic 35.0%
!! GGTTTAATGGATTTGGATCT+AGG - Chr2:62944282-62944301 None:intergenic 35.0%
!! TACAACACTTTAAAACAGCG+CGG - Chr2:62939568-62939587 None:intergenic 35.0%
!! TACCATTTGAGAGTACCTAA+AGG - Chr2:62944878-62944897 None:intergenic 35.0%
!! TAGGTGTTACTCTTTGATCA+AGG + Chr2:62940254-62940273 MsG0280010019.01.T01:intron 35.0%
!!! ACTTTTTCATTAGGTGCTGA+TGG + Chr2:62944782-62944801 MsG0280010019.01.T01:CDS 35.0%
!!! TGTAGCTTACTTTTAGGACA+CGG - Chr2:62941475-62941494 None:intergenic 35.0%
AATATATGGGAATTGGGGAC+GGG + Chr2:62939261-62939280 MsG0280010019.01.T01:intron 40.0%
AATGAGAAGAATGCCAACTG+TGG - Chr2:62943139-62943158 None:intergenic 40.0%
ACTAACGGAGTCTACATTCA+GGG - Chr2:62943670-62943689 None:intergenic 40.0%
ACTAACGGAGTCTGCATTTA+GGG + Chr2:62943368-62943387 MsG0280010019.01.T01:intron 40.0%
ATCATGAAGAAGAGGATGGA+AGG + Chr2:62942850-62942869 MsG0280010019.01.T01:intron 40.0%
ATTCAATTTCTCATCCCTGC+TGG + Chr2:62939212-62939231 MsG0280010019.01.T01:CDS 40.0%
ATTTCAGAATTGAGCTGAGG+TGG - Chr2:62940083-62940102 None:intergenic 40.0%
GAAATCCGCTGTTTGTTCTT+GGG + Chr2:62939736-62939755 MsG0280010019.01.T01:intron 40.0%
GAAGAATTAATGGGGTGATG+CGG + Chr2:62939870-62939889 MsG0280010019.01.T01:intron 40.0%
GAAGAGACCAAAACAGGTAA+CGG + Chr2:62942928-62942947 MsG0280010019.01.T01:intron 40.0%
GAAGATCATGAAGAAGAGGA+TGG + Chr2:62942846-62942865 MsG0280010019.01.T01:intron 40.0%
GAAGGGACCAAAACATGTAA+CGG - Chr2:62942040-62942059 None:intergenic 40.0%
GACGAATCATCTTCCATTCA+GGG + Chr2:62943758-62943777 MsG0280010019.01.T01:intron 40.0%
GACTAACGAAGTCTACATTC+AGG + Chr2:62943335-62943354 MsG0280010019.01.T01:intron 40.0%
GCCATTACAGTTTGTATGCT+AGG + Chr2:62940227-62940246 MsG0280010019.01.T01:intron 40.0%
GTTGTGCTAGTTATCCCAAT+TGG + Chr2:62942469-62942488 MsG0280010019.01.T01:intron 40.0%
GTTTCACCACTTGTGAGATT+AGG + Chr2:62940730-62940749 MsG0280010019.01.T01:intron 40.0%
TAAAGCTGCGTCAATCAAAG+TGG + Chr2:62940785-62940804 MsG0280010019.01.T01:intron 40.0%
TATGCAAAACAGTCTCTGCA+TGG + Chr2:62943292-62943311 MsG0280010019.01.T01:intron 40.0%
TCAGGGACTAAAGTGACTAA+CGG - Chr2:62943340-62943321 None:intergenic 40.0%
TCTCTGCATGGTCAATTTCA+GGG + Chr2:62943304-62943323 MsG0280010019.01.T01:intron 40.0%
TGACGAATCATCTTCCATTC+AGG + Chr2:62943757-62943776 MsG0280010019.01.T01:intron 40.0%
TGCCAAATGTCGAAATTGCA+AGG + Chr2:62941125-62941144 MsG0280010019.01.T01:intron 40.0%
TGCCTTTAGGTACTCTCAAA+TGG + Chr2:62944873-62944892 MsG0280010019.01.T01:CDS 40.0%
TGCTGATGGAAATCTTGTGT+TGG + Chr2:62944796-62944815 MsG0280010019.01.T01:CDS 40.0%
TGGCATGCATACTGGTAATT+TGG + Chr2:62939321-62939340 MsG0280010019.01.T01:intron 40.0%
TTAACGGAAGAGACCAAAAC+AGG + Chr2:62942922-62942941 MsG0280010019.01.T01:intron 40.0%
TTCAATGCTCCATTCCAAGT+TGG + Chr2:62944638-62944657 MsG0280010019.01.T01:CDS 40.0%
TTCAATTTCTCATCCCTGCT+GGG + Chr2:62939213-62939232 MsG0280010019.01.T01:CDS 40.0%
TTCACCACTTGTGAGATTAG+GGG + Chr2:62940732-62940751 MsG0280010019.01.T01:intron 40.0%
! ACCATTAAATCCTGCTGACT+TGG + Chr2:62941567-62941586 MsG0280010019.01.T01:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+CGG + Chr2:62943233-62943252 MsG0280010019.01.T01:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG + Chr2:62943233-62943252 MsG0280010019.01.T01:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG - Chr2:62943252-62943233 None:intergenic 40.0%
! GATCAACAGGCTTTGATACT+AGG - Chr2:62940886-62940905 None:intergenic 40.0%
! TAATTTGGAGTTCGATCGTG+AGG + Chr2:62939336-62939355 MsG0280010019.01.T01:intron 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG + Chr2:62943232-62943251 MsG0280010019.01.T01:intron 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG - Chr2:62943251-62943232 None:intergenic 40.0%
! TGAGGTAGATTGAGTGTTGT+TGG - Chr2:62942401-62942420 None:intergenic 40.0%
!! AAGGTACTTGAGGCATCTTT+TGG - Chr2:62944356-62944375 None:intergenic 40.0%
!! AGAAGGTTAGAAGGTACTTG+AGG - Chr2:62944366-62944385 None:intergenic 40.0%
!! AGTTAGCCTTGTAACCTCAA+TGG - Chr2:62940517-62940536 None:intergenic 40.0%
!! TTCACTCTAGCTCTTCGTAT+GGG + Chr2:62944686-62944705 MsG0280010019.01.T01:CDS 40.0%
AACTGTAATGGCTGACGAAC+AGG - Chr2:62940219-62940238 None:intergenic 45.0%
AACTGTGGTTGACGTGTTCT+TGG - Chr2:62943124-62943143 None:intergenic 45.0%
AAGAACACGTCAACCACAGT+TGG + Chr2:62943123-62943142 MsG0280010019.01.T01:intron 45.0%
AAGAAGAGGATGGAAGGAGA+AGG + Chr2:62942856-62942875 MsG0280010019.01.T01:intron 45.0%
ACTTACCGCTATGTCCATTG+AGG + Chr2:62940639-62940658 MsG0280010019.01.T01:intron 45.0%
ACTTTAGTCCCTGAATCGGA+AGG + Chr2:62943537-62943556 MsG0280010019.01.T01:intron 45.0%
AGTTTGTATGCTAGGTGGCT+AGG + Chr2:62940235-62940254 MsG0280010019.01.T01:intron 45.0%
ATATATGGGAATTGGGGACG+GGG + Chr2:62939262-62939281 MsG0280010019.01.T01:intron 45.0%
ATGAGTACGAGTACGGTGAT+AGG + Chr2:62939237-62939256 MsG0280010019.01.T01:intron 45.0%
ATGGACATAGCGGTAAGTGT+TGG - Chr2:62940637-62940656 None:intergenic 45.0%
CACAGTCCATTGAGGTTACA+AGG + Chr2:62940508-62940527 MsG0280010019.01.T01:intron 45.0%
CATACGAAGAGCTAGAGTGA+AGG - Chr2:62944687-62944706 None:intergenic 45.0%
CCTAACCTCAATGGACATAG+CGG - Chr2:62940647-62940666 None:intergenic 45.0%
CGAAATCCGCTGTTTGTTCT+TGG + Chr2:62939735-62939754 MsG0280010019.01.T01:intron 45.0%
CTTTAGTCCCTGAATCGGAA+GGG + Chr2:62943538-62943557 MsG0280010019.01.T01:intron 45.0%
GACTAACGGAGTCTACATTC+AGG - Chr2:62943671-62943690 None:intergenic 45.0%
GACTAACGGAGTCTGCATTT+AGG + Chr2:62943367-62943386 MsG0280010019.01.T01:intron 45.0%
GACTAATCGTTCCCCATTCA+GGG + Chr2:62943459-62943478 MsG0280010019.01.T01:intron 45.0%
GCAAACCCAAGAACAAACAG+CGG - Chr2:62939744-62939763 None:intergenic 45.0%
GCAATGCAGAAGACCAGAAA+TGG + Chr2:62941499-62941518 MsG0280010019.01.T01:intron 45.0%
GCAGAAGACCAGAAATGGAA+TGG + Chr2:62941504-62941523 MsG0280010019.01.T01:intron 45.0%
GCCAAGTCAGCAGGATTTAA+TGG - Chr2:62941571-62941590 None:intergenic 45.0%
GGACAACAAATTGCACCACT+AGG - Chr2:62941006-62941025 None:intergenic 45.0%
GGCCTTGCAATTTCGACATT+TGG - Chr2:62941130-62941149 None:intergenic 45.0%
GGGAACCTGAGTTTGATTCT+TGG - Chr2:62939391-62939410 None:intergenic 45.0%
GTCTCTGCATGGTCAATTTC+AGG + Chr2:62943303-62943322 MsG0280010019.01.T01:intron 45.0%
GTGTGTTCACGTGTCTCAAT+TGG + Chr2:62942531-62942550 MsG0280010019.01.T01:intron 45.0%
TACCAGTATGCATGCCAATG+AGG - Chr2:62939318-62939337 None:intergenic 45.0%
TATTTGCTTCCCATACCCAC+CGG - Chr2:62944736-62944755 None:intergenic 45.0%
TCCCTGAAATTGACCATGCA+GGG + Chr2:62943698-62943717 MsG0280010019.01.T01:intron 45.0%
TCGTATGGGACTTCAACGAT+CGG + Chr2:62944700-62944719 MsG0280010019.01.T01:CDS 45.0%
TGACTAATCGTTCCCCATTC+AGG + Chr2:62943458-62943477 MsG0280010019.01.T01:intron 45.0%
TGGGTATGGGAAGCAAATAG+AGG + Chr2:62944737-62944756 MsG0280010019.01.T01:CDS 45.0%
TGTCATCCAAAAAGGCCTAG+TGG + Chr2:62940988-62941007 MsG0280010019.01.T01:intron 45.0%
TGTGGTCAGTGTTAGCACAA+TGG - Chr2:62940490-62940509 None:intergenic 45.0%
! ACCAGCCCAGCAAATTTTAC+AGG - Chr2:62939545-62939564 None:intergenic 45.0%
! ATTGCACCACTAGGCCTTTT+TGG - Chr2:62940997-62941016 None:intergenic 45.0%
! ATTTTAAACCGTGCGACGCA+CGG + Chr2:62939926-62939945 MsG0280010019.01.T01:intron 45.0%
! GAACAAACAGCGGATTTCGA+AGG - Chr2:62939734-62939753 None:intergenic 45.0%
! GTCACTTTAGTCCCTGAATG+GGG + Chr2:62943234-62943253 MsG0280010019.01.T01:intron 45.0%
! GTCACTTTAGTCCCTGAATG+GGG - Chr2:62943253-62943234 None:intergenic 45.0%
! TCATCTTCTCCCCCATTTTC+TGG + Chr2:62942159-62942178 MsG0280010019.01.T01:intron 45.0%
!! AGAGCTAGAGTGAAGGCATT+TGG - Chr2:62944680-62944699 None:intergenic 45.0%
!! AGCTAGAGTGAAGGCATTTG+GGG - Chr2:62944678-62944697 None:intergenic 45.0%
!! CTTCACTCTAGCTCTTCGTA+TGG + Chr2:62944685-62944704 MsG0280010019.01.T01:CDS 45.0%
!! CTTGTGTTGGCTAATGCTGA+TGG + Chr2:62944809-62944828 MsG0280010019.01.T01:CDS 45.0%
!! GAGCTAGAGTGAAGGCATTT+GGG - Chr2:62944679-62944698 None:intergenic 45.0%
!! TCCTGTAAAATTTGCTGGGC+TGG + Chr2:62939541-62939560 MsG0280010019.01.T01:intron 45.0%
!! TCGGTGTCGTTCTTCAACTT+TGG + Chr2:62942434-62942453 MsG0280010019.01.T01:intron 45.0%
!! TGTAACCTCAATGGACTGTG+TGG - Chr2:62940508-62940527 None:intergenic 45.0%
!!! CTGCTATCCACGTGTCATTT+TGG + Chr2:62942086-62942105 MsG0280010019.01.T01:intron 45.0%
!!! TCCACGTGTCATTTTGGCAT+TGG + Chr2:62942092-62942111 MsG0280010019.01.T01:intron 45.0%
!!! ATATAAGTTTTTTTTTTTAA+TGG - Chr2:62944226-62944245 None:intergenic 5.0%
!!! TTAAAGATTTAATTATTTTT+TGG - Chr2:62940194-62940213 None:intergenic 5.0%
ACACATAACTGTGAGGTCCC+GGG - Chr2:62941175-62941194 None:intergenic 50.0%
ACTCGTACTCATACCCAGCA+GGG - Chr2:62939229-62939248 None:intergenic 50.0%
ACTGACCACACAGTCCATTG+AGG + Chr2:62940500-62940519 MsG0280010019.01.T01:intron 50.0%
ACTTGTGAGATTAGGGGTCG+GGG + Chr2:62940738-62940757 MsG0280010019.01.T01:intron 50.0%
CACACATAACTGTGAGGTCC+CGG - Chr2:62941176-62941195 None:intergenic 50.0%
CACTTGAAGCGTACTCCAAG+TGG - Chr2:62940690-62940709 None:intergenic 50.0%
CACTTGTGAGATTAGGGGTC+GGG + Chr2:62940737-62940756 MsG0280010019.01.T01:intron 50.0%
CCAACTGAACTAAGTGCACG+AGG + Chr2:62943929-62943948 MsG0280010019.01.T01:intron 50.0%
CCACTTGTGAGATTAGGGGT+CGG + Chr2:62940736-62940755 MsG0280010019.01.T01:intron 50.0%
CCCCTGCATGGTCAATTTCA+GGG - Chr2:62943702-62943721 None:intergenic 50.0%
CCCTGAAATTGACCATGCAG+GGG + Chr2:62943699-62943718 MsG0280010019.01.T01:intron 50.0%
CCGCTATGTCCATTGAGGTT+AGG + Chr2:62940644-62940663 MsG0280010019.01.T01:intron 50.0%
CCTCGTGCACTTAGTTCAGT+TGG - Chr2:62943932-62943951 None:intergenic 50.0%
CGACATTTGGCAGTTGAGCT+AGG - Chr2:62941117-62941136 None:intergenic 50.0%
GACAGTGGTGCTTCACATTG+AGG - Chr2:62940019-62940038 None:intergenic 50.0%
GACGAATCCCTTCCGATTCA+GGG - Chr2:62943548-62943567 None:intergenic 50.0%
GACGAATCGTTCCCCATTCA+GGG - Chr2:62943248-62943267 None:intergenic 50.0%
GATGAGATACCTGAACCCGT+CGG + Chr2:62939176-62939195 MsG0280010019.01.T01:CDS 50.0%
GCAAATAGAGGCAACCCAGT+TGG + Chr2:62944749-62944768 MsG0280010019.01.T01:CDS 50.0%
GCACATGTGCGTGAGATACA+TGG + Chr2:62939767-62939786 MsG0280010019.01.T01:intron 50.0%
GCCAATGCCAAAATGACACG+TGG - Chr2:62942096-62942115 None:intergenic 50.0%
GCTGGGTATGAGTACGAGTA+CGG + Chr2:62939230-62939249 MsG0280010019.01.T01:CDS 50.0%
GTCCCTGAAATTGACCATGC+AGG + Chr2:62943697-62943716 MsG0280010019.01.T01:intron 50.0%
TAATGGGGTGATGCGGTGAT+GGG + Chr2:62939877-62939896 MsG0280010019.01.T01:intron 50.0%
TACTCGTACTCATACCCAGC+AGG - Chr2:62939230-62939249 None:intergenic 50.0%
TCCCCTGCATGGTCAATTTC+AGG - Chr2:62943703-62943722 None:intergenic 50.0%
TGACGAATCCCTTCCGATTC+AGG - Chr2:62943549-62943568 None:intergenic 50.0%
TGACGAATCGTTCCCCATTC+AGG - Chr2:62943249-62943268 None:intergenic 50.0%
TTAATGGGGTGATGCGGTGA+TGG + Chr2:62939876-62939895 MsG0280010019.01.T01:intron 50.0%
TTGCAAAACAGTCCCCTGCA+TGG - Chr2:62943714-62943733 None:intergenic 50.0%
! AACGATCGGAGCAGCTTTTC+CGG + Chr2:62944714-62944733 MsG0280010019.01.T01:CDS 50.0%
! GATTAGGGGTCGGGGTTTTT+AGG + Chr2:62940746-62940765 MsG0280010019.01.T01:intron 50.0%
! TTTTAAACCGTGCGACGCAC+GGG + Chr2:62939927-62939946 MsG0280010019.01.T01:intron 50.0%
!! GGCAACCCAGTTGGTGAAAA+TGG + Chr2:62944758-62944777 MsG0280010019.01.T01:CDS 50.0%
AGCACCACTGTCGTCATCTG+CGG + Chr2:62940027-62940046 MsG0280010019.01.T01:intron 55.0%
ATACCTGAACCCGTCGGAGA+CGG + Chr2:62939182-62939201 MsG0280010019.01.T01:CDS 55.0%
CCGACCCCTAATCTCACAAG+TGG - Chr2:62940739-62940758 None:intergenic 55.0%
CGCCTCATTGGCATGCATAC+TGG + Chr2:62939313-62939332 MsG0280010019.01.T01:intron 55.0%
CTGAGGTGGATCTGATGTGG+CGG - Chr2:62940069-62940088 None:intergenic 55.0%
GAGCTGAGGTGGATCTGATG+TGG - Chr2:62940072-62940091 None:intergenic 55.0%
GTATGCATGCCAATGAGGCG+AGG - Chr2:62939313-62939332 None:intergenic 55.0%
TCGAACCCAGATCACGACGT+CGG - Chr2:62941151-62941170 None:intergenic 55.0%
TCGTGATCTGGGTTCGAACC+CGG + Chr2:62941154-62941173 MsG0280010019.01.T01:intron 55.0%
TCTGATGTGGCGGCTAGAGT+TGG - Chr2:62940059-62940078 None:intergenic 55.0%
! AGCAGCTTTTCCGGTGGGTA+TGG + Chr2:62944723-62944742 MsG0280010019.01.T01:CDS 55.0%
! ATCGGAGCAGCTTTTCCGGT+GGG + Chr2:62944718-62944737 MsG0280010019.01.T01:CDS 55.0%
! GCAGCTTTTCCGGTGGGTAT+GGG + Chr2:62944724-62944743 MsG0280010019.01.T01:CDS 55.0%
!! GCACGGGTTAGGTCACTAGT+AGG + Chr2:62939943-62939962 MsG0280010019.01.T01:intron 55.0%
AATCTCGTCCCCGTCTCCGA+CGG - Chr2:62939195-62939214 None:intergenic 60.0%
ATGGGAATTGGGGACGGGGA+CGG + Chr2:62939266-62939285 MsG0280010019.01.T01:intron 60.0%
ATGTCCCCACCTCGCCTCAT+TGG + Chr2:62939301-62939320 MsG0280010019.01.T01:intron 60.0%
CAAGGCCGACGTCGTGATCT+GGG + Chr2:62941143-62941162 MsG0280010019.01.T01:intron 60.0%
CATGCCAATGAGGCGAGGTG+GGG - Chr2:62939308-62939327 None:intergenic 60.0%
CGTACCGCAGATGACGACAG+TGG - Chr2:62940034-62940053 None:intergenic 60.0%
CGTGATCTGGGTTCGAACCC+GGG + Chr2:62941155-62941174 MsG0280010019.01.T01:intron 60.0%
GCATGCCAATGAGGCGAGGT+GGG - Chr2:62939309-62939328 None:intergenic 60.0%
GGTGGTCAAGGTTCGAACCC+TGG + Chr2:62943879-62943898 MsG0280010019.01.T01:intron 60.0%
TACCTGAACCCGTCGGAGAC+GGG + Chr2:62939183-62939202 MsG0280010019.01.T01:CDS 60.0%
TGCATGCCAATGAGGCGAGG+TGG - Chr2:62939310-62939329 None:intergenic 60.0%
! GATCGGAGCAGCTTTTCCGG+TGG + Chr2:62944717-62944736 MsG0280010019.01.T01:CDS 60.0%
AACCGTGCGACGCACGGGTT+AGG + Chr2:62939932-62939951 MsG0280010019.01.T01:intron 65.0%
ACCTGAACCCGTCGGAGACG+GGG + Chr2:62939184-62939203 MsG0280010019.01.T01:CDS 65.0%
ATCTCGTCCCCGTCTCCGAC+GGG - Chr2:62939194-62939213 None:intergenic 65.0%
GACCTAACCCGTGCGTCGCA+CGG - Chr2:62939937-62939956 None:intergenic 65.0%
GCAAGGCCGACGTCGTGATC+TGG + Chr2:62941142-62941161 MsG0280010019.01.T01:intron 65.0%
TGGGAATTGGGGACGGGGAC+GGG + Chr2:62939267-62939286 MsG0280010019.01.T01:intron 65.0%
GGGAATTGGGGACGGGGACG+GGG + Chr2:62939268-62939287 MsG0280010019.01.T01:intron 70.0%
! TCCCCGTCTCCGACGGGTTC+AGG - Chr2:62939188-62939207 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 62939173 62944898 62939173 ID=MsG0280010019.01;Name=MsG0280010019.01
Chr2 mRNA 62939173 62944898 62939173 ID=MsG0280010019.01.T01;Parent=MsG0280010019.01;Name=MsG0280010019.01.T01;_AED=0.50;_eAED=0.60;_QI=0|0|0|1|1|1|2|0|131
Chr2 exon 62939173 62939251 62939173 ID=MsG0280010019.01.T01:exon:34858;Parent=MsG0280010019.01.T01
Chr2 exon 62944582 62944898 62944582 ID=MsG0280010019.01.T01:exon:34859;Parent=MsG0280010019.01.T01
Chr2 CDS 62939173 62939251 62939173 ID=MsG0280010019.01.T01:cds;Parent=MsG0280010019.01.T01
Chr2 CDS 62944582 62944898 62944582 ID=MsG0280010019.01.T01:cds;Parent=MsG0280010019.01.T01
Gene Sequence

>MsG0280010019.01.T01

ATGGATGAGATACCTGAACCCGTCGGAGACGGGGACGAGATTCAATTTCTCATCCCTGCTGGGTATGAGTACGAGTACGGTGAACTTGGACCATTCATAGTAGAATATGGAGGTGATTACAGAATGATAAGCATATTCAATGCTCCATTCCAAGTTGGTTTCTACAACACTACCCCAAATGCCTTCACTCTAGCTCTTCGTATGGGACTTCAACGATCGGAGCAGCTTTTCCGGTGGGTATGGGAAGCAAATAGAGGCAACCCAGTTGGTGAAAATGGAACTTTTTCATTAGGTGCTGATGGAAATCTTGTGTTGGCTAATGCTGATGGAAGAATTGTTTGGCAAACAAACACTTCCAATAAAGGTGTTGTGCCTTTAGGTACTCTCAAATGGTAA

Protein sequence

>MsG0280010019.01.T01

MDEIPEPVGDGDEIQFLIPAGYEYEYGELGPFIVEYGGDYRMISIFNAPFQVGFYNTTPNAFTLALRMGLQRSEQLFRWVWEANRGNPVGENGTFSLGADGNLVLANADGRIVWQTNTSNKGVVPLGTLKW*