AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021488.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021488.01.T01 MTR_4g074370 83.910 752 27 6 1 744 1 666 0.0 1216
MsG0480021488.01.T01 MTR_4g108040 78.592 355 15 5 398 744 21 322 1.35e-149 440
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021488.01.T01 AT3G19830 58.266 738 181 15 14 737 23 647 0.0 758
MsG0480021488.01.T01 AT3G19830 58.266 738 181 15 14 737 23 647 0.0 758
MsG0480021488.01.T01 AT3G19830 58.266 738 181 15 14 737 23 647 0.0 758
MsG0480021488.01.T01 AT3G19830 58.266 738 181 15 14 737 23 647 0.0 758
MsG0480021488.01.T01 AT1G50260 56.831 732 188 15 1 720 1 616 0.0 684
MsG0480021488.01.T01 AT1G50260 62.228 368 103 7 1 357 1 343 2.61e-126 390
MsG0480021488.01.T01 AT1G50260 54.007 287 78 6 435 720 342 575 3.37e-76 258

Find 189 sgRNAs with CRISPR-Local

Find 449 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAATTAATACTTTGAAAT+TGG 0.093738 4:-58535900 None:intergenic
ATTTCGTTTGTTCAACTTAA+TGG 0.132446 4:+58537884 MsG0480021488.01.T01:CDS
TTAAGCCTTTCTCTGAAATT+TGG 0.173257 4:+58537708 MsG0480021488.01.T01:CDS
AATTCGCTAATTCTGCTAAA+AGG 0.177736 4:+58536218 MsG0480021488.01.T01:CDS
TTAGCAGAATTAGCGAATTT+TGG 0.179251 4:-58536214 None:intergenic
AGAATCATTTATGGATGTTT+TGG 0.240494 4:+58541495 MsG0480021488.01.T01:CDS
GGACTTGAGAATTGGATTAT+TGG 0.248656 4:+58536670 MsG0480021488.01.T01:CDS
GCGCCCCTGGAATGCCAATT+TGG 0.250515 4:+58539678 MsG0480021488.01.T01:CDS
GATAATTCTGAAGGTTCTTC+TGG 0.258885 4:+58541661 MsG0480021488.01.T01:CDS
CTTGGGTCGGAGCTGCTTCA+TGG 0.263197 4:+58537820 MsG0480021488.01.T01:CDS
GACAGTTCAAACTTGATCTT+TGG 0.263404 4:-58537858 None:intergenic
GGCAGATAAAGAATCATTTA+TGG 0.272115 4:+58541486 MsG0480021488.01.T01:CDS
CCAGCAACGTTTCGGTTAAT+AGG 0.284701 4:-58536430 None:intergenic
TTTGAATTGAAGATGAATAA+AGG 0.292974 4:-58536168 None:intergenic
GACTTGAGAATTGGATTATT+GGG 0.298406 4:+58536671 MsG0480021488.01.T01:CDS
ACGGCCAAACAAAATTGTTT+TGG 0.302867 4:+58538750 MsG0480021488.01.T01:CDS
TGAATTAATACTTTGAAATT+GGG 0.304874 4:-58535899 None:intergenic
TGATTCCAAATTGGCATTCC+AGG 0.305676 4:-58539683 None:intergenic
TTTCGTTTGTTCAACTTAAT+GGG 0.307586 4:+58537885 MsG0480021488.01.T01:CDS
GGGATGAACCTTTGTCTGTT+AGG 0.310807 4:+58536770 MsG0480021488.01.T01:CDS
TTTACCAAAGGTTTGGATAA+TGG 0.313194 4:+58541571 MsG0480021488.01.T01:CDS
AAACAACTCTCCCAAACTAT+TGG 0.314326 4:+58538084 MsG0480021488.01.T01:CDS
CAGTATACCTAAGGCCTATC+TGG 0.314663 4:-58537668 None:intergenic
GGATTTGCAGATTTGACTAT+TGG 0.318186 4:+58539856 MsG0480021488.01.T01:CDS
TGGGAAGGGTGCAGGGGTTT+CGG 0.322125 4:+58540638 MsG0480021488.01.T01:CDS
CCTATTAACCGAAACGTTGC+TGG 0.325852 4:+58536430 MsG0480021488.01.T01:CDS
GGGATAGTAGCATCTGAAAC+AGG 0.328126 4:+58541547 MsG0480021488.01.T01:CDS
TCAACCCTTTCAACATAATC+AGG 0.328171 4:-58536727 None:intergenic
AATTAGAGATTCTAAGAGTA+TGG 0.329702 4:-58541689 None:intergenic
AACAACACCTGATTCCAAAT+TGG 0.330831 4:-58539692 None:intergenic
TACTTTGAAATTGGGATTTG+TGG 0.333753 4:-58535891 None:intergenic
GAGATTAAGCAGTTCTCGTT+AGG 0.346911 4:+58536748 MsG0480021488.01.T01:CDS
CAAACTATTGGGTTAAAACT+TGG 0.349023 4:+58538096 MsG0480021488.01.T01:CDS
GATGTTCATGGGAAGGGTGC+AGG 0.350361 4:+58540630 MsG0480021488.01.T01:CDS
GCCAGAAAATATTCTACCTT+TGG 0.350599 4:-58540538 None:intergenic
CCAGAAAATATTCTACCTTT+GGG 0.357191 4:-58540537 None:intergenic
GGGAAAGGAAAGAAGAGAAT+TGG 0.357282 4:-58536071 None:intergenic
GAGGGATTCACAGGTTCAAT+TGG 0.357792 4:+58536321 MsG0480021488.01.T01:CDS
AACAGGGTTTACCAAAGGTT+TGG 0.361166 4:+58541564 MsG0480021488.01.T01:CDS
GGATAAGCTTAGAACTCAAT+TGG 0.361720 4:+58536381 MsG0480021488.01.T01:CDS
CAGATAGGCCTTAGGTATAC+TGG 0.362284 4:+58537669 MsG0480021488.01.T01:CDS
GAATGGGTGAATATGGTGTT+AGG 0.371051 4:+58536622 MsG0480021488.01.T01:CDS
TTCTTCAAATCATCAATAAC+AGG 0.371788 4:-58536703 None:intergenic
TGAAGAATCATGAATGGATA+TGG 0.378391 4:-58535992 None:intergenic
TAAATCTACTGTAAGAAGTT+TGG 0.378740 4:-58538713 None:intergenic
GTCGGTTGAATGGGTGAATA+TGG 0.388145 4:+58536615 MsG0480021488.01.T01:CDS
ATAGAGGTGGACTTGAGAAT+TGG 0.388213 4:+58536662 MsG0480021488.01.T01:CDS
TTAATAGGAGGCGATGGAAT+CGG 0.391102 4:-58536415 None:intergenic
ATTCGCTAATTCTGCTAAAA+GGG 0.391915 4:+58536219 MsG0480021488.01.T01:CDS
GTTCTAAGCTTATCCACAAT+TGG 0.393077 4:-58536373 None:intergenic
TAGTGGAGTGGTGGTGGAAA+TGG 0.393137 4:+58538014 MsG0480021488.01.T01:intron
ATCCCAGAGCGTCCTTAACT+TGG 0.393432 4:-58539837 None:intergenic
TTGGATAATGGCTCAAATAC+AGG 0.400332 4:+58541583 MsG0480021488.01.T01:CDS
TTGAATTGAAGATGAATAAA+GGG 0.400506 4:-58536167 None:intergenic
TAATAGGAGGCGATGGAATC+GGG 0.401713 4:-58536414 None:intergenic
GGAAGCATAATTGTTGTTGC+AGG 0.407437 4:-58536050 None:intergenic
ACACCAACAGGTACAACAAT+TGG 0.410509 4:-58537738 None:intergenic
TGAGCCATTATCCAAACCTT+TGG 0.412143 4:-58541575 None:intergenic
TCGGGTTGGAAACAAGCATA+TGG 0.412541 4:-58539795 None:intergenic
ATTGATTCCGCATTGGCAAC+AGG 0.413301 4:-58541625 None:intergenic
GTCGTTGATGGTGTTAAATC+TGG 0.415146 4:+58538817 MsG0480021488.01.T01:CDS
AACAACTCTCCCAAACTATT+GGG 0.415871 4:+58538085 MsG0480021488.01.T01:CDS
TGGAATGCCAATTTGGAATC+AGG 0.417628 4:+58539685 MsG0480021488.01.T01:CDS
ACTACTGTCATTGGCGCCCC+TGG 0.419613 4:+58539665 MsG0480021488.01.T01:CDS
TGACATTGATGGTGAACTTT+GGG 0.426042 4:+58537770 MsG0480021488.01.T01:CDS
TGTAATGAAGGGGTCCTAGT+AGG 0.433643 4:+58540597 MsG0480021488.01.T01:CDS
ATAAATGATTCTTTATCTGC+CGG 0.434471 4:-58541484 None:intergenic
ATGTTATGAAGAAATTGAAT+TGG 0.437482 4:-58535797 None:intergenic
CCATATGTCATTCTTAGCCT+TGG 0.439251 4:+58539608 MsG0480021488.01.T01:CDS
TAATACCAAATTTCAGAGAA+AGG 0.439413 4:-58537713 None:intergenic
CAAAGAGAGAAGTGAAAAGT+AGG 0.440111 4:-58536025 None:intergenic
ACTGTTGGTCCTGTCGTTGA+TGG 0.440638 4:+58538805 MsG0480021488.01.T01:CDS
ATTAATACCAACAGCTCCTT+GGG 0.443767 4:+58537803 MsG0480021488.01.T01:CDS
AAACTATTGGGTTAAAACTT+GGG 0.445192 4:+58538097 MsG0480021488.01.T01:CDS
TATCCAAGTTAAGGACGCTC+TGG 0.445536 4:+58539834 MsG0480021488.01.T01:CDS
ATTAAGTTGAACAAACGAAA+TGG 0.449004 4:-58537882 None:intergenic
GACAGAATTGTTGCTTTACA+AGG 0.450629 4:+58541268 MsG0480021488.01.T01:CDS
TCAAAATCTCGAACACCAAC+AGG 0.452033 4:-58537750 None:intergenic
ATGTTCATGGGAAGGGTGCA+GGG 0.453715 4:+58540631 MsG0480021488.01.T01:CDS
GTCTGAAACATCTATATCAA+TGG 0.453813 4:-58541395 None:intergenic
TTGGGTCGGAGCTGCTTCAT+GGG 0.457177 4:+58537821 MsG0480021488.01.T01:CDS
AAAATGTAAACTTGAATGCT+TGG 0.457267 4:-58535858 None:intergenic
CAAACAAACCAGCAACGTTT+CGG 0.458309 4:-58536438 None:intergenic
AACAGTCAAACTACTGTCAT+TGG 0.458505 4:+58539656 MsG0480021488.01.T01:CDS
TTGACATTGATGGTGAACTT+TGG 0.460520 4:+58537769 MsG0480021488.01.T01:CDS
ACTTGAATGCTTGGGAATGT+TGG 0.462686 4:-58535849 None:intergenic
AATGATGAACTTGAAGTTGA+AGG 0.462989 4:+58536283 MsG0480021488.01.T01:CDS
CAGCTTTCAATGTGTAATGA+AGG 0.464038 4:+58540585 MsG0480021488.01.T01:CDS
AAGAGAAGAGGATGAACAAA+GGG 0.471997 4:-58535965 None:intergenic
GAAGTTAAGTATCCAAGTTA+AGG 0.473337 4:+58539825 MsG0480021488.01.T01:CDS
GATTAATACCAACAGCTCCT+TGG 0.474206 4:+58537802 MsG0480021488.01.T01:CDS
TTTCAGATGCTACTATCCCT+TGG 0.481868 4:-58541543 None:intergenic
AGGGATTCACAGGTTCAATT+GGG 0.482120 4:+58536322 MsG0480021488.01.T01:CDS
AGATTAAGCAGTTCTCGTTA+GGG 0.484229 4:+58536749 MsG0480021488.01.T01:CDS
GAGGAAAGAGTCGGTTGAAT+GGG 0.494576 4:+58536606 MsG0480021488.01.T01:CDS
TTGTGGAAGGTTTATAGAGG+TGG 0.495319 4:+58536649 MsG0480021488.01.T01:CDS
AACTATTGGGTTAAAACTTG+GGG 0.495984 4:+58538098 MsG0480021488.01.T01:CDS
CCAAGGCTAAGAATGACATA+TGG 0.496475 4:-58539608 None:intergenic
GATTCCAAATTGGCATTCCA+GGG 0.496914 4:-58539682 None:intergenic
AAATGTAAACTTGAATGCTT+GGG 0.497706 4:-58535857 None:intergenic
AGAGGAAAGAGTCGGTTGAA+TGG 0.499889 4:+58536605 MsG0480021488.01.T01:CDS
AAGTTGTGGAAGGTTTATAG+AGG 0.500887 4:+58536646 MsG0480021488.01.T01:CDS
GATAAGCTTAGAACTCAATT+GGG 0.503313 4:+58536382 MsG0480021488.01.T01:CDS
ATTCCAATTGTTGTACCTGT+TGG 0.505566 4:+58537735 MsG0480021488.01.T01:CDS
CTAGATACCAGATAGGCCTT+AGG 0.509703 4:+58537661 MsG0480021488.01.T01:intron
GGTGTTAGGGAAGTTGTGGA+AGG 0.511394 4:+58536636 MsG0480021488.01.T01:CDS
TTTGGCCGTACAAATAGTCT+AGG 0.514653 4:-58538736 None:intergenic
AGGCGGTGAACGTGAATTGA+GGG 0.516382 4:+58536303 MsG0480021488.01.T01:CDS
AGCAAATGTCACTGATACGA+TGG 0.516797 4:+58541441 MsG0480021488.01.T01:CDS
CAGAATTGTTGCTTTACAAG+GGG 0.518230 4:+58541270 MsG0480021488.01.T01:CDS
GTTGGAAGTGGGAAGAGGAA+TGG 0.522718 4:-58535831 None:intergenic
GGAATGTTGGAAGTGGGAAG+AGG 0.527131 4:-58535836 None:intergenic
GGATATGGATAGAAGAGAAG+AGG 0.529154 4:-58535977 None:intergenic
AGAAGCCTGATTATGTTGAA+AGG 0.533351 4:+58536722 MsG0480021488.01.T01:CDS
AAGGCGGTGAACGTGAATTG+AGG 0.533789 4:+58536302 MsG0480021488.01.T01:CDS
GCTTGTTGAAGAATCATGAA+TGG 0.534248 4:-58535998 None:intergenic
TGAACTCTCCGTCACTCTTG+TGG 0.534872 4:+58538873 MsG0480021488.01.T01:CDS
ACGACAGGACCAACAGTGAC+GGG 0.535880 4:-58538799 None:intergenic
TGTTCATGGGAAGGGTGCAG+GGG 0.535954 4:+58540632 MsG0480021488.01.T01:CDS
TGGTAACACTCTTGATCACT+TGG 0.536111 4:+58538034 MsG0480021488.01.T01:CDS
ATTTACCTAGACTATTTGTA+CGG 0.536468 4:+58538731 MsG0480021488.01.T01:CDS
AATGGGTGAATATGGTGTTA+GGG 0.536900 4:+58536623 MsG0480021488.01.T01:CDS
AGTAAGAGATTCTGCGTACC+CGG 0.537398 4:+58541465 MsG0480021488.01.T01:CDS
GCTAACATATAAAGCATATG+TGG 0.540309 4:+58541339 MsG0480021488.01.T01:CDS
TAAATGATTCTTTATCTGCC+GGG 0.543828 4:-58541483 None:intergenic
TAAAGCATATGTGGAGGATG+AGG 0.544623 4:+58541348 MsG0480021488.01.T01:CDS
ATGCTTGGGAATGTTGGAAG+TGG 0.546750 4:-58535843 None:intergenic
CATGAAGCAGCTCCGACCCA+AGG 0.547246 4:-58537819 None:intergenic
GAAGCATAATTGTTGTTGCA+GGG 0.547931 4:-58536049 None:intergenic
TTCGAGAAGGGAAAAGCTGT+TGG 0.550160 4:+58538775 MsG0480021488.01.T01:CDS
GTAATGAAGGGGTCCTAGTA+GGG 0.552426 4:+58540598 MsG0480021488.01.T01:CDS
AAAGCAACAATTCTGTCTGT+TGG 0.552705 4:-58541262 None:intergenic
GCTGTTGGTCCCGTCACTGT+TGG 0.556112 4:+58538790 MsG0480021488.01.T01:CDS
ACGTGAATTGAGGGATTCAC+AGG 0.556743 4:+58536312 MsG0480021488.01.T01:CDS
ATATGGTGTTAGGGAAGTTG+TGG 0.559551 4:+58536632 MsG0480021488.01.T01:CDS
GAAGCCTGATTATGTTGAAA+GGG 0.562405 4:+58536723 MsG0480021488.01.T01:CDS
GAGGAACAAAGTTAGTAGTG+AGG 0.565375 4:+58536516 MsG0480021488.01.T01:CDS
ATCCAAGTTAAGGACGCTCT+GGG 0.566547 4:+58539835 MsG0480021488.01.T01:CDS
AGCTTTCAATGTGTAATGAA+GGG 0.567363 4:+58540586 MsG0480021488.01.T01:CDS
AACGACAGGACCAACAGTGA+CGG 0.567745 4:-58538800 None:intergenic
GGAAGAGGAATGGAATGGAA+TGG 0.572243 4:-58535821 None:intergenic
AAAGTTGGATGTTCATGGGA+AGG 0.577255 4:+58540623 MsG0480021488.01.T01:CDS
CGTCTGGGGAGATATTGCTT+AGG 0.577276 4:+58541317 MsG0480021488.01.T01:CDS
TGCGTATGGTTTGATCTCCA+AGG 0.577385 4:-58539625 None:intergenic
AGGAGGAATTGATTCCGCAT+TGG 0.577509 4:-58541632 None:intergenic
CCTAGTGCTGATAATTCTGA+AGG 0.579399 4:+58541652 MsG0480021488.01.T01:CDS
TTTCGGTTAATAGGAGGCGA+TGG 0.580978 4:-58536421 None:intergenic
CTGGCGTGTGCTGGGAACAA+TGG 0.582063 4:+58540556 MsG0480021488.01.T01:CDS
ATTGTTAGCGAAGAATTCCA+AGG 0.582227 4:+58541526 MsG0480021488.01.T01:CDS
AAGTGGGAAGAGGAATGGAA+TGG 0.582233 4:-58535826 None:intergenic
GCTCCGACCCAAGGAGCTGT+TGG 0.582843 4:-58537810 None:intergenic
GAAGAGAAGAGGATGAACAA+AGG 0.582871 4:-58535966 None:intergenic
CCTTCAGAATTATCAGCACT+AGG 0.583333 4:-58541652 None:intergenic
ACAGAATTGTTGCTTTACAA+GGG 0.587625 4:+58541269 MsG0480021488.01.T01:CDS
TGCTTGGGAATGTTGGAAGT+GGG 0.588529 4:-58535842 None:intergenic
GAAGGAAACATGGATTCTGT+TGG 0.589437 4:+58538850 MsG0480021488.01.T01:CDS
GCAACGTTTCGGTTAATAGG+AGG 0.597078 4:-58536427 None:intergenic
AGAAATGCAAGAAGGAAACA+TGG 0.598978 4:+58538840 MsG0480021488.01.T01:CDS
TGGATAATGGCTCAAATACA+GGG 0.600302 4:+58541584 MsG0480021488.01.T01:CDS
GATTAAGCAGTTCTCGTTAG+GGG 0.603380 4:+58536750 MsG0480021488.01.T01:CDS
GATTTAACACCATCAACGAC+AGG 0.604084 4:-58538814 None:intergenic
TCTGAAACAGGGTTTACCAA+AGG 0.606194 4:+58541559 MsG0480021488.01.T01:CDS
GGATTTGCAGAGGAAAGAGT+CGG 0.606583 4:+58536597 MsG0480021488.01.T01:CDS
TCAACATTCCTAACAGACAA+AGG 0.608428 4:-58536778 None:intergenic
TGAACAAAGGGTCATTACAA+TGG 0.609767 4:-58535953 None:intergenic
AATTCTGAAGGTTCTTCTGG+AGG 0.615378 4:+58541664 MsG0480021488.01.T01:CDS
TCGAGCATCCACAAGAGTGA+CGG 0.615531 4:-58538881 None:intergenic
TTTACGAAAGGGCTCGTCTG+GGG 0.616659 4:+58541303 MsG0480021488.01.T01:CDS
CTGTTAGGAATGTTGAACGT+AGG 0.617986 4:+58536785 MsG0480021488.01.T01:CDS
GCAAATGTCACTGATACGAT+GGG 0.619729 4:+58541442 MsG0480021488.01.T01:CDS
TTCGCTAATTCTGCTAAAAG+GGG 0.623857 4:+58536220 MsG0480021488.01.T01:CDS
AAGTTGGATGTTCATGGGAA+GGG 0.624159 4:+58540624 MsG0480021488.01.T01:CDS
GAGCACCTCCAGTATACCTA+AGG 0.624172 4:-58537677 None:intergenic
AAATCTGGAGAAATGCAAGA+AGG 0.625821 4:+58538832 MsG0480021488.01.T01:CDS
AAAATCTCCTGTTGCCAATG+CGG 0.628618 4:+58541618 MsG0480021488.01.T01:CDS
GCTTTCAATGTGTAATGAAG+GGG 0.631094 4:+58540587 MsG0480021488.01.T01:CDS
AACATATAAAGCATATGTGG+AGG 0.636889 4:+58541342 MsG0480021488.01.T01:CDS
ATACCAACAGCTCCTTGGGT+CGG 0.637925 4:+58537807 MsG0480021488.01.T01:CDS
TTGTTAGCGAAGAATTCCAA+GGG 0.640177 4:+58541527 MsG0480021488.01.T01:CDS
GGATAGTAGCATCTGAAACA+GGG 0.653128 4:+58541548 MsG0480021488.01.T01:CDS
ATTCCAAATTGGCATTCCAG+GGG 0.656517 4:-58539681 None:intergenic
CTTAGTCGCTGAAAGAACTG+TGG 0.664598 4:+58540497 MsG0480021488.01.T01:intron
AGAATTGTTGCTTTACAAGG+GGG 0.665731 4:+58541271 MsG0480021488.01.T01:CDS
CATACTGTAAATCATTGACA+CGG 0.674498 4:-58536816 None:intergenic
GGAAGATGACAAGACTGAGG+AGG 0.675289 4:+58541369 MsG0480021488.01.T01:CDS
TCAGAATTATCAGCACTAGG+AGG 0.678287 4:-58541649 None:intergenic
TGAGGAAGATGACAAGACTG+AGG 0.700576 4:+58541366 MsG0480021488.01.T01:CDS
ATAGGCCTTAGGTATACTGG+AGG 0.717784 4:+58537672 MsG0480021488.01.T01:CDS
GATGAACTTGAAGTTGAAGG+CGG 0.752430 4:+58536286 MsG0480021488.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAATGAAAAAAAAAAAAAAA+GGG - Chr4:58537213-58537232 None:intergenic 10.0%
!!! ATAGTTTTTTTTTTTTTGAT+AGG + Chr4:58538174-58538193 MsG0480021488.01.T01:intron 10.0%
!! AAAACAAATATAAGACAAAA+TGG - Chr4:58539470-58539489 None:intergenic 15.0%
!! AAACAAATATAAGACAAAAT+GGG - Chr4:58539469-58539488 None:intergenic 15.0%
!! AAATAAAAAAAAATTGAGTG+GGG - Chr4:58539564-58539583 None:intergenic 15.0%
!! AACACAATAAATATTTAATC+TGG - Chr4:58538535-58538554 None:intergenic 15.0%
!! AGAAATACAATTACTAAAAA+TGG - Chr4:58537549-58537568 None:intergenic 15.0%
!! CAAATAAAAAAAAATTGAGT+GGG - Chr4:58539565-58539584 None:intergenic 15.0%
!! CCAATGAAAAAAAAAAAAAA+AGG - Chr4:58537214-58537233 None:intergenic 15.0%
!! GCTTAAATTATTTAATCTTA+CGG + Chr4:58540361-58540380 MsG0480021488.01.T01:intron 15.0%
!! TGAGAAAATATTTGAAAAAT+TGG - Chr4:58540123-58540142 None:intergenic 15.0%
!! TTGTAAATGCATATTTAAAA+TGG + Chr4:58538407-58538426 MsG0480021488.01.T01:intron 15.0%
!!! AAATATGTATTTTAAATGCA+AGG - Chr4:58538228-58538247 None:intergenic 15.0%
!!! AATGATTTGTTTGTTTTTAT+TGG + Chr4:58539393-58539412 MsG0480021488.01.T01:intron 15.0%
!!! ATATCTATAACATGTATTTT+TGG + Chr4:58540097-58540116 MsG0480021488.01.T01:intron 15.0%
!!! ATTTTTAGTAATTGTATTTC+TGG + Chr4:58537548-58537567 MsG0480021488.01.T01:intron 15.0%
!!! CCTTTTTTTTTTTTTTTCAT+TGG + Chr4:58537211-58537230 MsG0480021488.01.T01:intron 15.0%
!!! TAGATTTTACCAAAAAAATA+AGG - Chr4:58538913-58538932 None:intergenic 15.0%
!!! TGAATTAATACTTTGAAATT+GGG - Chr4:58535902-58535921 None:intergenic 15.0%
!!! TTGAATTAATACTTTGAAAT+TGG - Chr4:58535903-58535922 None:intergenic 15.0%
!!! TTTTATCCTCTAATATTATT+TGG + Chr4:58539088-58539107 MsG0480021488.01.T01:intron 15.0%
!! AACAAATATAAGACAAAATG+GGG - Chr4:58539468-58539487 None:intergenic 20.0%
!! ATCAAAATTAAAATACCAGA+TGG - Chr4:58538153-58538172 None:intergenic 20.0%
!! ATGTTATGAAGAAATTGAAT+TGG - Chr4:58535800-58535819 None:intergenic 20.0%
!! GCAAATAAAAAAAAATTGAG+TGG - Chr4:58539566-58539585 None:intergenic 20.0%
!! TAAATTATTTAATCTTACGG+AGG + Chr4:58540364-58540383 MsG0480021488.01.T01:intron 20.0%
!! TAGATGAGTTATATTATTAG+TGG + Chr4:58540320-58540339 MsG0480021488.01.T01:intron 20.0%
!! TTGAATTGAAGATGAATAAA+GGG - Chr4:58536170-58536189 None:intergenic 20.0%
!! TTTATTGTGTTAATCGTAAA+TGG + Chr4:58538544-58538563 MsG0480021488.01.T01:intron 20.0%
!! TTTGAATTGAAGATGAATAA+AGG - Chr4:58536171-58536190 None:intergenic 20.0%
!!! AAATCCAAAACAATTTTGTT+TGG - Chr4:58538757-58538776 None:intergenic 20.0%
!!! AAATTTTACTACTTTTCAAG+AGG + Chr4:58536348-58536367 MsG0480021488.01.T01:CDS 20.0%
!!! ATATTTTCTCATTAAAAGTC+TGG + Chr4:58540132-58540151 MsG0480021488.01.T01:intron 20.0%
!!! ATTGCTGCTTTTTTTTTTTT+TGG + Chr4:58538958-58538977 MsG0480021488.01.T01:intron 20.0%
!!! GTGTTGTTTTTGATAAATTA+TGG + Chr4:58536479-58536498 MsG0480021488.01.T01:CDS 20.0%
!!! TATATTAGTATCGATTAACA+TGG + Chr4:58539137-58539156 MsG0480021488.01.T01:intron 20.0%
!!! TATTTTTTATTTTAGTGGAG+TGG + Chr4:58538002-58538021 MsG0480021488.01.T01:intron 20.0%
!!! TCATTTTTATATATGCTCAT+TGG + Chr4:58537003-58537022 MsG0480021488.01.T01:intron 20.0%
!!! TCTTATTTGATAATGTTTTC+AGG + Chr4:58541210-58541229 MsG0480021488.01.T01:intron 20.0%
!!! TTTAGTACTTTTATGTTATG+TGG + Chr4:58539041-58539060 MsG0480021488.01.T01:intron 20.0%
!!! TTTGTGTTTTTTTTCTTTGT+TGG + Chr4:58536457-58536476 MsG0480021488.01.T01:CDS 20.0%
!!! TTTTTATTTGCTATTTTTCC+AGG + Chr4:58539575-58539594 MsG0480021488.01.T01:intron 20.0%
! AAAAACAGAGAAAAACTAGT+AGG - Chr4:58536571-58536590 None:intergenic 25.0%
! AAAACACACAATATTCTGAA+TGG + Chr4:58540992-58541011 MsG0480021488.01.T01:intron 25.0%
! AAAATGTAAACTTGAATGCT+TGG - Chr4:58535861-58535880 None:intergenic 25.0%
! AAACTATTGGGTTAAAACTT+GGG + Chr4:58538097-58538116 MsG0480021488.01.T01:CDS 25.0%
! AAATGTAAACTTGAATGCTT+GGG - Chr4:58535860-58535879 None:intergenic 25.0%
! AACACAAATTTAATGGCAAA+AGG - Chr4:58540764-58540783 None:intergenic 25.0%
! AAGACTATACTACATCTAAA+TGG - Chr4:58540933-58540952 None:intergenic 25.0%
! AGTATAAACAAAGATGAATC+AGG - Chr4:58539727-58539746 None:intergenic 25.0%
! ATAAATGATTCTTTATCTGC+CGG - Chr4:58541487-58541506 None:intergenic 25.0%
! ATGAATATTCTCTATAGAAG+AGG + Chr4:58539327-58539346 MsG0480021488.01.T01:intron 25.0%
! ATTTACCTAGACTATTTGTA+CGG + Chr4:58538731-58538750 MsG0480021488.01.T01:CDS 25.0%
! ATTTCACATTATTTCCTAAC+TGG - Chr4:58539526-58539545 None:intergenic 25.0%
! ATTTCGTTTGTTCAACTTAA+TGG + Chr4:58537884-58537903 MsG0480021488.01.T01:CDS 25.0%
! CTAACTGTATGTAATTATTC+TGG + Chr4:58538668-58538687 MsG0480021488.01.T01:intron 25.0%
! GCAAATTTCGTAGAAAAAAA+TGG + Chr4:58536143-58536162 MsG0480021488.01.T01:CDS 25.0%
! TAAAAGTTATGCAGCAAAAA+GGG - Chr4:58540810-58540829 None:intergenic 25.0%
! TAAATCTACTGTAAGAAGTT+TGG - Chr4:58538716-58538735 None:intergenic 25.0%
! TAATACCAAATTTCAGAGAA+AGG - Chr4:58537716-58537735 None:intergenic 25.0%
! TGGATTATTTGTAGTAGATT+GGG + Chr4:58538978-58538997 MsG0480021488.01.T01:intron 25.0%
! TGTGAACCAAATAATATTAG+AGG - Chr4:58539097-58539116 None:intergenic 25.0%
! TGTTTGCAATTGATTAAGAA+TGG + Chr4:58541162-58541181 MsG0480021488.01.T01:intron 25.0%
! TTAACTCTGTTCAATTCATA+AGG - Chr4:58540269-58540288 None:intergenic 25.0%
! TTAATGTTATCTGCTGAAAA+GGG + Chr4:58536941-58536960 MsG0480021488.01.T01:intron 25.0%
! TTATCATATCTTCTGTAGAA+AGG + Chr4:58537504-58537523 MsG0480021488.01.T01:intron 25.0%
! TTCTTCAAATCATCAATAAC+AGG - Chr4:58536706-58536725 None:intergenic 25.0%
! TTGGATTATTTGTAGTAGAT+TGG + Chr4:58538977-58538996 MsG0480021488.01.T01:intron 25.0%
! TTTAAAAATAAGAAGCCCAA+AGG + Chr4:58540522-58540541 MsG0480021488.01.T01:CDS 25.0%
! TTTAATGTTATCTGCTGAAA+AGG + Chr4:58536940-58536959 MsG0480021488.01.T01:intron 25.0%
! TTTCGTTTGTTCAACTTAAT+GGG + Chr4:58537885-58537904 MsG0480021488.01.T01:CDS 25.0%
!! AATATAGTGTATTTTCCATC+TGG + Chr4:58538135-58538154 MsG0480021488.01.T01:intron 25.0%
!! AATATTGTGTGTTTTGCAAT+GGG - Chr4:58540987-58541006 None:intergenic 25.0%
!! AATTAGAGATTCTAAGAGTA+TGG - Chr4:58541692-58541711 None:intergenic 25.0%
!! AGAATCATTTATGGATGTTT+TGG + Chr4:58541495-58541514 MsG0480021488.01.T01:CDS 25.0%
!! GCTTAAGTTAAATGTTTTGT+TGG + Chr4:58537402-58537421 MsG0480021488.01.T01:intron 25.0%
!! TCATAACTAAAACGTAGTTT+TGG + Chr4:58539424-58539443 MsG0480021488.01.T01:intron 25.0%
!!! AAGTTTTAACCCAATAGTTT+GGG - Chr4:58538097-58538116 None:intergenic 25.0%
!!! AATTATGGACTTTTAGAAGA+AGG + Chr4:58536494-58536513 MsG0480021488.01.T01:CDS 25.0%
!!! ATAATGTTTTCAGGTTGATT+TGG + Chr4:58541219-58541238 MsG0480021488.01.T01:intron 25.0%
!!! ATACTTAACTTCTGCTTTTT+CGG - Chr4:58539817-58539836 None:intergenic 25.0%
!!! ATTAAGTTGAACAAACGAAA+TGG - Chr4:58537885-58537904 None:intergenic 25.0%
!!! GTTATTAGTATCGATTAACA+TGG + Chr4:58539199-58539218 MsG0480021488.01.T01:intron 25.0%
!!! TAATGTTTTCAGGTTGATTT+GGG + Chr4:58541220-58541239 MsG0480021488.01.T01:intron 25.0%
!!! TACTAGTTTTTCTCTGTTTT+TGG + Chr4:58536570-58536589 MsG0480021488.01.T01:CDS 25.0%
!!! TATACGCAATTTATTTTCCT+TGG + Chr4:58537632-58537651 MsG0480021488.01.T01:intron 25.0%
!!! TGAAAATAAGCGTTTTTTCA+TGG - Chr4:58536107-58536126 None:intergenic 25.0%
!!! TTTGGGCTTCTTATTTTTAA+AGG - Chr4:58540523-58540542 None:intergenic 25.0%
!!! TTTTTTCATGGTTTTGGAAA+GGG - Chr4:58536095-58536114 None:intergenic 25.0%
AAAAAAAAAAAAGGGCAACC+CGG - Chr4:58537205-58537224 None:intergenic 30.0%
AACATATAAAGCATATGTGG+AGG + Chr4:58541342-58541361 MsG0480021488.01.T01:CDS 30.0%
AACTATTGGGTTAAAACTTG+GGG + Chr4:58538098-58538117 MsG0480021488.01.T01:CDS 30.0%
AATGATGAACTTGAAGTTGA+AGG + Chr4:58536283-58536302 MsG0480021488.01.T01:CDS 30.0%
AATGGCAAAAGGATAAAAGA+AGG - Chr4:58540753-58540772 None:intergenic 30.0%
AATTCGCTAATTCTGCTAAA+AGG + Chr4:58536218-58536237 MsG0480021488.01.T01:CDS 30.0%
ACAGAGGAACACAAATTTAA+TGG - Chr4:58540771-58540790 None:intergenic 30.0%
AGCTTTCAATGTGTAATGAA+GGG + Chr4:58540586-58540605 MsG0480021488.01.T01:CDS 30.0%
ATTAGAAAGTAACTGCACTT+TGG + Chr4:58538495-58538514 MsG0480021488.01.T01:intron 30.0%
ATTCGCTAATTCTGCTAAAA+GGG + Chr4:58536219-58536238 MsG0480021488.01.T01:CDS 30.0%
ATTCTTGTGAATACTGAAAC+TGG - Chr4:58539502-58539521 None:intergenic 30.0%
ATTTGTGTTCCTCTGTTATA+AGG + Chr4:58540775-58540794 MsG0480021488.01.T01:intron 30.0%
CAAACTATTGGGTTAAAACT+TGG + Chr4:58538096-58538115 MsG0480021488.01.T01:CDS 30.0%
CATACTGTAAATCATTGACA+CGG - Chr4:58536819-58536838 None:intergenic 30.0%
CCAGAAAATATTCTACCTTT+GGG - Chr4:58540540-58540559 None:intergenic 30.0%
CTAAAAGTTATGCAGCAAAA+AGG - Chr4:58540811-58540830 None:intergenic 30.0%
GAAGTTAAGTATCCAAGTTA+AGG + Chr4:58539825-58539844 MsG0480021488.01.T01:CDS 30.0%
GACTTGAGAATTGGATTATT+GGG + Chr4:58536671-58536690 MsG0480021488.01.T01:CDS 30.0%
GATAAGCTTAGAACTCAATT+GGG + Chr4:58536382-58536401 MsG0480021488.01.T01:CDS 30.0%
GCTAACATATAAAGCATATG+TGG + Chr4:58541339-58541358 MsG0480021488.01.T01:CDS 30.0%
GGCAGATAAAGAATCATTTA+TGG + Chr4:58541486-58541505 MsG0480021488.01.T01:CDS 30.0%
TAAATGATTCTTTATCTGCC+GGG - Chr4:58541486-58541505 None:intergenic 30.0%
TAAGCAAAGATGTGCTTATT+AGG + Chr4:58540205-58540224 MsG0480021488.01.T01:intron 30.0%
TAATTACATACAGTTAGTGC+AGG - Chr4:58538665-58538684 None:intergenic 30.0%
TATTCACAAGAATACCAGTT+AGG + Chr4:58539509-58539528 MsG0480021488.01.T01:intron 30.0%
TGAAGAATCATGAATGGATA+TGG - Chr4:58535995-58536014 None:intergenic 30.0%
TGACTCATTATTATTGCATG+TGG + Chr4:58540171-58540190 MsG0480021488.01.T01:intron 30.0%
TGGCATGAAAATAGTTAACA+TGG - Chr4:58540913-58540932 None:intergenic 30.0%
TGTGAATACAAGGGAAAATA+TGG - Chr4:58539754-58539773 None:intergenic 30.0%
TTTACCAAAGGTTTGGATAA+TGG + Chr4:58541571-58541590 MsG0480021488.01.T01:CDS 30.0%
TTTCTGGATTTATATTCCTG+AGG + Chr4:58537564-58537583 MsG0480021488.01.T01:intron 30.0%
! AGAATTAGCGAATTTTGGAT+GGG - Chr4:58536212-58536231 None:intergenic 30.0%
! ATATTGTGTGTTTTGCAATG+GGG - Chr4:58540986-58541005 None:intergenic 30.0%
! GAATATTGTGTGTTTTGCAA+TGG - Chr4:58540988-58541007 None:intergenic 30.0%
! GTCTGAAACATCTATATCAA+TGG - Chr4:58541398-58541417 None:intergenic 30.0%
! GTTATGGATTATCTCTAGAT+TGG + Chr4:58538619-58538638 MsG0480021488.01.T01:intron 30.0%
! GTTTTATCTAGATACCAGAT+AGG + Chr4:58537654-58537673 MsG0480021488.01.T01:intron 30.0%
! TTAGCAGAATTAGCGAATTT+TGG - Chr4:58536217-58536236 None:intergenic 30.0%
! TTCTTCTTTTGTGCATCATT+GGG + Chr4:58538290-58538309 MsG0480021488.01.T01:intron 30.0%
! TTTCTTCTTTTGTGCATCAT+TGG + Chr4:58538289-58538308 MsG0480021488.01.T01:intron 30.0%
!! ACAGAATTGTTGCTTTACAA+GGG + Chr4:58541269-58541288 MsG0480021488.01.T01:CDS 30.0%
!! ATGAAGTCATTTTCAAACTG+AGG + Chr4:58536976-58536995 MsG0480021488.01.T01:intron 30.0%
!! CAAGTTTTAACCCAATAGTT+TGG - Chr4:58538098-58538117 None:intergenic 30.0%
!! GTGCAATACCAAAAGTATTT+GGG + Chr4:58539902-58539921 MsG0480021488.01.T01:intron 30.0%
!! TACTTTGAAATTGGGATTTG+TGG - Chr4:58535894-58535913 None:intergenic 30.0%
!! TGTGCAATACCAAAAGTATT+TGG + Chr4:58539901-58539920 MsG0480021488.01.T01:intron 30.0%
!! TTAAGCCTTTCTCTGAAATT+TGG + Chr4:58537708-58537727 MsG0480021488.01.T01:CDS 30.0%
!!! AAAGGATCAGTTTTGGATTT+TGG + Chr4:58537522-58537541 MsG0480021488.01.T01:intron 30.0%
!!! AATTGTTTTGGATTTCGAGA+AGG + Chr4:58538762-58538781 MsG0480021488.01.T01:CDS 30.0%
!!! ATTGTTTTGGATTTCGAGAA+GGG + Chr4:58538763-58538782 MsG0480021488.01.T01:CDS 30.0%
!!! CGAAAGCTTCCTTATTTTTT+TGG + Chr4:58538901-58538920 MsG0480021488.01.T01:CDS 30.0%
!!! GTTTTTTCATGGTTTTGGAA+AGG - Chr4:58536096-58536115 None:intergenic 30.0%
!!! TAAGCGTTTTTTCATGGTTT+TGG - Chr4:58536101-58536120 None:intergenic 30.0%
!!! TACCAAAAGTATTTGGGTTT+TGG + Chr4:58539908-58539927 MsG0480021488.01.T01:intron 30.0%
!!! TACTTAACTTCTGCTTTTTC+GGG - Chr4:58539816-58539835 None:intergenic 30.0%
!!! TTTTTATTTTAGTGGAGTGG+TGG + Chr4:58538005-58538024 MsG0480021488.01.T01:intron 30.0%
!!! TTTTTCATGGTTTTGGAAAG+GGG - Chr4:58536094-58536113 None:intergenic 30.0%
!!! TTTTTCTCTGTTTTTGGAGA+AGG + Chr4:58536576-58536595 MsG0480021488.01.T01:CDS 30.0%
AAACAACTCTCCCAAACTAT+TGG + Chr4:58538084-58538103 MsG0480021488.01.T01:CDS 35.0%
AAAGCAACAATTCTGTCTGT+TGG - Chr4:58541265-58541284 None:intergenic 35.0%
AAATCTGGAGAAATGCAAGA+AGG + Chr4:58538832-58538851 MsG0480021488.01.T01:CDS 35.0%
AACAACACCTGATTCCAAAT+TGG - Chr4:58539695-58539714 None:intergenic 35.0%
AACAACTCTCCCAAACTATT+GGG + Chr4:58538085-58538104 MsG0480021488.01.T01:CDS 35.0%
AACAGTCAAACTACTGTCAT+TGG + Chr4:58539656-58539675 MsG0480021488.01.T01:CDS 35.0%
AACATCACTACTTTGATGCA+AGG - Chr4:58541086-58541105 None:intergenic 35.0%
AAGAGAAGAGGATGAACAAA+GGG - Chr4:58535968-58535987 None:intergenic 35.0%
AAGTTGTGGAAGGTTTATAG+AGG + Chr4:58536646-58536665 MsG0480021488.01.T01:CDS 35.0%
ACATCACTACTTTGATGCAA+GGG - Chr4:58541085-58541104 None:intergenic 35.0%
ACTAGTAAGTAGAGATCACA+AGG - Chr4:58539946-58539965 None:intergenic 35.0%
ACTCATCAAATTCTCATCCA+GGG + Chr4:58537240-58537259 MsG0480021488.01.T01:intron 35.0%
AGAAATGCAAGAAGGAAACA+TGG + Chr4:58538840-58538859 MsG0480021488.01.T01:CDS 35.0%
AGAAGCCTGATTATGTTGAA+AGG + Chr4:58536722-58536741 MsG0480021488.01.T01:CDS 35.0%
AGATTAAGCAGTTCTCGTTA+GGG + Chr4:58536749-58536768 MsG0480021488.01.T01:CDS 35.0%
ATGATGAGAAGACAATGACA+TGG + Chr4:58537294-58537313 MsG0480021488.01.T01:intron 35.0%
ATTAATACCAACAGCTCCTT+GGG + Chr4:58537803-58537822 MsG0480021488.01.T01:CDS 35.0%
ATTCCAATTGTTGTACCTGT+TGG + Chr4:58537735-58537754 MsG0480021488.01.T01:CDS 35.0%
ATTGTTAGCGAAGAATTCCA+AGG + Chr4:58541526-58541545 MsG0480021488.01.T01:CDS 35.0%
ATTTATATTCCTGAGGTCTG+AGG + Chr4:58537571-58537590 MsG0480021488.01.T01:intron 35.0%
CAAAGAGAGAAGTGAAAAGT+AGG - Chr4:58536028-58536047 None:intergenic 35.0%
CAAATAAGAAACATACACCC+AGG - Chr4:58541199-58541218 None:intergenic 35.0%
CAGCTTTCAATGTGTAATGA+AGG + Chr4:58540585-58540604 MsG0480021488.01.T01:CDS 35.0%
CATAACGATGAAGAGAAACA+AGG - Chr4:58538605-58538624 None:intergenic 35.0%
CTGGTATCTAGATAAAACCA+AGG - Chr4:58537652-58537671 None:intergenic 35.0%
GAAGCCTGATTATGTTGAAA+GGG + Chr4:58536723-58536742 MsG0480021488.01.T01:CDS 35.0%
GACAGTTCAAACTTGATCTT+TGG - Chr4:58537861-58537880 None:intergenic 35.0%
GCCAGAAAATATTCTACCTT+TGG - Chr4:58540541-58540560 None:intergenic 35.0%
GCTAGAACATGTGAATACAA+GGG - Chr4:58539763-58539782 None:intergenic 35.0%
GCTTTCAATGTGTAATGAAG+GGG + Chr4:58540587-58540606 MsG0480021488.01.T01:CDS 35.0%
GGAAAAAGTTGGATGTTCAT+GGG + Chr4:58540619-58540638 MsG0480021488.01.T01:CDS 35.0%
GGACTTGAGAATTGGATTAT+TGG + Chr4:58536670-58536689 MsG0480021488.01.T01:CDS 35.0%
GGATAAGCTTAGAACTCAAT+TGG + Chr4:58536381-58536400 MsG0480021488.01.T01:CDS 35.0%
GGATTTGCAGATTTGACTAT+TGG + Chr4:58539856-58539875 MsG0480021488.01.T01:CDS 35.0%
GTCAAAAACCTACAAGAGAA+AGG - Chr4:58538694-58538713 None:intergenic 35.0%
GTTATGTGGACAATGTTATG+TGG + Chr4:58539055-58539074 MsG0480021488.01.T01:intron 35.0%
TAAAAATCCCAGCACGTTAA+AGG - Chr4:58540886-58540905 None:intergenic 35.0%
TACATTAACTAAAACAGCCC+TGG - Chr4:58537260-58537279 None:intergenic 35.0%
TACTCATCAAATTCTCATCC+AGG + Chr4:58537239-58537258 MsG0480021488.01.T01:intron 35.0%
TCAACATTCCTAACAGACAA+AGG - Chr4:58536781-58536800 None:intergenic 35.0%
TCAACCCTTTCAACATAATC+AGG - Chr4:58536730-58536749 None:intergenic 35.0%
TGAACAAAGGGTCATTACAA+TGG - Chr4:58535956-58535975 None:intergenic 35.0%
TGCTAGAACATGTGAATACA+AGG - Chr4:58539764-58539783 None:intergenic 35.0%
TGTCAACTACTCTCTTTGAT+GGG - Chr4:58540848-58540867 None:intergenic 35.0%
TTCGCTAATTCTGCTAAAAG+GGG + Chr4:58536220-58536239 MsG0480021488.01.T01:CDS 35.0%
TTGTCAACTACTCTCTTTGA+TGG - Chr4:58540849-58540868 None:intergenic 35.0%
TTGTTAGCGAAGAATTCCAA+GGG + Chr4:58541527-58541546 MsG0480021488.01.T01:CDS 35.0%
! AAAAAAGTGGAGTACCAAGA+GGG - Chr4:58537325-58537344 None:intergenic 35.0%
! AATGGGTGAATATGGTGTTA+GGG + Chr4:58536623-58536642 MsG0480021488.01.T01:CDS 35.0%
! ACGGCCAAACAAAATTGTTT+TGG + Chr4:58538750-58538769 MsG0480021488.01.T01:CDS 35.0%
! CACCAAAACCCAAATACTTT+TGG - Chr4:58539913-58539932 None:intergenic 35.0%
! CAGAATTAGCGAATTTTGGA+TGG - Chr4:58536213-58536232 None:intergenic 35.0%
! CCCAAAGGTAGAATATTTTC+TGG + Chr4:58540537-58540556 MsG0480021488.01.T01:CDS 35.0%
! CTTGTTTCTCTTCATCGTTA+TGG + Chr4:58538603-58538622 MsG0480021488.01.T01:intron 35.0%
! GAAGCATAATTGTTGTTGCA+GGG - Chr4:58536052-58536071 None:intergenic 35.0%
! GATAATTCTGAAGGTTCTTC+TGG + Chr4:58541661-58541680 MsG0480021488.01.T01:CDS 35.0%
! GCTTGTTGAAGAATCATGAA+TGG - Chr4:58536001-58536020 None:intergenic 35.0%
! GTTCTAAGCTTATCCACAAT+TGG - Chr4:58536376-58536395 None:intergenic 35.0%
! TCATCTAAGATCACCAATTC+TGG - Chr4:58540307-58540326 None:intergenic 35.0%
! TCTGTAGAAAGGATCAGTTT+TGG + Chr4:58537515-58537534 MsG0480021488.01.T01:intron 35.0%
! TGGATAATGGCTCAAATACA+GGG + Chr4:58541584-58541603 MsG0480021488.01.T01:CDS 35.0%
! TTGGATAATGGCTCAAATAC+AGG + Chr4:58541583-58541602 MsG0480021488.01.T01:CDS 35.0%
!! AGAATTGTTGCTTTACAAGG+GGG + Chr4:58541271-58541290 MsG0480021488.01.T01:CDS 35.0%
!! CAGAATTGTTGCTTTACAAG+GGG + Chr4:58541270-58541289 MsG0480021488.01.T01:CDS 35.0%
!! GACAGAATTGTTGCTTTACA+AGG + Chr4:58541268-58541287 MsG0480021488.01.T01:CDS 35.0%
!! GTTCGAGATTTTGACATTGA+TGG + Chr4:58537759-58537778 MsG0480021488.01.T01:CDS 35.0%
!! TATGGACTTTTAGAAGAAGG+AGG + Chr4:58536497-58536516 MsG0480021488.01.T01:CDS 35.0%
!! TGACATTGATGGTGAACTTT+GGG + Chr4:58537770-58537789 MsG0480021488.01.T01:CDS 35.0%
!! TTGACATTGATGGTGAACTT+TGG + Chr4:58537769-58537788 MsG0480021488.01.T01:CDS 35.0%
!! TTTTCAAGAGGATCCAATTG+TGG + Chr4:58536360-58536379 MsG0480021488.01.T01:CDS 35.0%
!!! AGAATGGAGCTATTTTTTCC+TGG + Chr4:58541178-58541197 MsG0480021488.01.T01:intron 35.0%
!!! GAATGGAGCTATTTTTTCCT+GGG + Chr4:58541179-58541198 MsG0480021488.01.T01:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - Chr4:58537114-58537133 None:intergenic 35.0%
AAAATCTCCTGTTGCCAATG+CGG + Chr4:58541618-58541637 MsG0480021488.01.T01:CDS 40.0%
AAAGTTGGATGTTCATGGGA+AGG + Chr4:58540623-58540642 MsG0480021488.01.T01:CDS 40.0%
AACAGGGTTTACCAAAGGTT+TGG + Chr4:58541564-58541583 MsG0480021488.01.T01:CDS 40.0%
AAGCACTCAGATCGTAAAAG+AGG - Chr4:58537937-58537956 None:intergenic 40.0%
AAGTTGGATGTTCATGGGAA+GGG + Chr4:58540624-58540643 MsG0480021488.01.T01:CDS 40.0%
ACACCAACAGGTACAACAAT+TGG - Chr4:58537741-58537760 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG + Chr4:58537107-58537126 MsG0480021488.01.T01:intron 40.0%
ACTACTTTGATGCAAGGGAT+TGG - Chr4:58541080-58541099 None:intergenic 40.0%
ACTGCGTACAATACACCAAA+TGG + Chr4:58537135-58537154 MsG0480021488.01.T01:intron 40.0%
ACTTGAATGCTTGGGAATGT+TGG - Chr4:58535852-58535871 None:intergenic 40.0%
AGAGGCAGAAGAAAGGAAAA+AGG + Chr4:58539345-58539364 MsG0480021488.01.T01:intron 40.0%
AGCAAATGTCACTGATACGA+TGG + Chr4:58541441-58541460 MsG0480021488.01.T01:CDS 40.0%
AGCTCAACTCCTTATAACAG+AGG - Chr4:58540787-58540806 None:intergenic 40.0%
AGGCAGAAGAAAGGAAAAAG+GGG + Chr4:58539347-58539366 MsG0480021488.01.T01:intron 40.0%
AGGGATTCACAGGTTCAATT+GGG + Chr4:58536322-58536341 MsG0480021488.01.T01:CDS 40.0%
ATGACATGGTATTTCCCTCT+TGG + Chr4:58537308-58537327 MsG0480021488.01.T01:intron 40.0%
ATTCCAAATTGGCATTCCAG+GGG - Chr4:58539684-58539703 None:intergenic 40.0%
CAAACAAACCAGCAACGTTT+CGG - Chr4:58536441-58536460 None:intergenic 40.0%
CAGCCTCTTGTGTAAAAACA+GGG + Chr4:58537108-58537127 MsG0480021488.01.T01:intron 40.0%
CCAAGGCTAAGAATGACATA+TGG - Chr4:58539611-58539630 None:intergenic 40.0%
CCATATGTCATTCTTAGCCT+TGG + Chr4:58539608-58539627 MsG0480021488.01.T01:CDS 40.0%
CCTTCAGAATTATCAGCACT+AGG - Chr4:58541655-58541674 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG + Chr4:58537139-58537158 MsG0480021488.01.T01:intron 40.0%
CTACTTTGATGCAAGGGATT+GGG - Chr4:58541079-58541098 None:intergenic 40.0%
CTATAGAAGAGGCAGAAGAA+AGG + Chr4:58539338-58539357 MsG0480021488.01.T01:intron 40.0%
CTGTTAGGAATGTTGAACGT+AGG + Chr4:58536785-58536804 MsG0480021488.01.T01:CDS 40.0%
CTTAGTGTCTTGTCTGTCTA+TGG + Chr4:58540041-58540060 MsG0480021488.01.T01:intron 40.0%
GAAAAACTAGTAGGCACTTG+CGG - Chr4:58536562-58536581 None:intergenic 40.0%
GAAACTTACATCGAGAGAAC+TGG - Chr4:58538330-58538349 None:intergenic 40.0%
GAAGAGAAGAGGATGAACAA+AGG - Chr4:58535969-58535988 None:intergenic 40.0%
GAAGGAAACATGGATTCTGT+TGG + Chr4:58538850-58538869 MsG0480021488.01.T01:CDS 40.0%
GAATGGGTGAATATGGTGTT+AGG + Chr4:58536622-58536641 MsG0480021488.01.T01:CDS 40.0%
GAGATTAAGCAGTTCTCGTT+AGG + Chr4:58536748-58536767 MsG0480021488.01.T01:CDS 40.0%
GAGGAACAAAGTTAGTAGTG+AGG + Chr4:58536516-58536535 MsG0480021488.01.T01:CDS 40.0%
GAGGCAGAAGAAAGGAAAAA+GGG + Chr4:58539346-58539365 MsG0480021488.01.T01:intron 40.0%
GATGAACTTGAAGTTGAAGG+CGG + Chr4:58536286-58536305 MsG0480021488.01.T01:CDS 40.0%
GATTAACATGGTAGACTCCA+AGG + Chr4:58539149-58539168 MsG0480021488.01.T01:intron 40.0%
GATTAAGCAGTTCTCGTTAG+GGG + Chr4:58536750-58536769 MsG0480021488.01.T01:CDS 40.0%
GATTAATACCAACAGCTCCT+TGG + Chr4:58537802-58537821 MsG0480021488.01.T01:CDS 40.0%
GATTCCAAATTGGCATTCCA+GGG - Chr4:58539685-58539704 None:intergenic 40.0%
GATTTAACACCATCAACGAC+AGG - Chr4:58538817-58538836 None:intergenic 40.0%
GCAAATGTCACTGATACGAT+GGG + Chr4:58541442-58541461 MsG0480021488.01.T01:CDS 40.0%
GCAATTAGCATGCAGCATTA+TGG - Chr4:58540068-58540087 None:intergenic 40.0%
GCACATCTTTGCTTAAGACA+AGG - Chr4:58540200-58540219 None:intergenic 40.0%
GCAGATTTGACTATTGGTAC+TGG + Chr4:58539862-58539881 MsG0480021488.01.T01:intron 40.0%
GGATATGGATAGAAGAGAAG+AGG - Chr4:58535980-58535999 None:intergenic 40.0%
GGGAAAAAGTTGGATGTTCA+TGG + Chr4:58540618-58540637 MsG0480021488.01.T01:CDS 40.0%
GGGAAAGGAAAGAAGAGAAT+TGG - Chr4:58536074-58536093 None:intergenic 40.0%
GTTGTTGTCATGTGACTGTA+AGG + Chr4:58537063-58537082 MsG0480021488.01.T01:intron 40.0%
TAAAGCATATGTGGAGGATG+AGG + Chr4:58541348-58541367 MsG0480021488.01.T01:CDS 40.0%
TAAGATCACCAATTCTGGTG+AGG - Chr4:58540302-58540321 None:intergenic 40.0%
TCAAAATCTCGAACACCAAC+AGG - Chr4:58537753-58537772 None:intergenic 40.0%
TCAGAATTATCAGCACTAGG+AGG - Chr4:58541652-58541671 None:intergenic 40.0%
TGAGCCATTATCCAAACCTT+TGG - Chr4:58541578-58541597 None:intergenic 40.0%
TGATTCCAAATTGGCATTCC+AGG - Chr4:58539686-58539705 None:intergenic 40.0%
TGCTCATTGGAATAGTACTG+AGG + Chr4:58537016-58537035 MsG0480021488.01.T01:intron 40.0%
TGGTAACACTCTTGATCACT+TGG + Chr4:58538034-58538053 MsG0480021488.01.T01:CDS 40.0%
TTAATAGGAGGCGATGGAAT+CGG - Chr4:58536418-58536437 None:intergenic 40.0%
TTCACATGTTCTAGCACTAC+AGG + Chr4:58539768-58539787 MsG0480021488.01.T01:intron 40.0%
TTCTTTCAGCGACTAAGCAA+AGG - Chr4:58540494-58540513 None:intergenic 40.0%
TTGTGGAAGGTTTATAGAGG+TGG + Chr4:58536649-58536668 MsG0480021488.01.T01:CDS 40.0%
TTTCAGATGCTACTATCCCT+TGG - Chr4:58541546-58541565 None:intergenic 40.0%
TTTGGCCGTACAAATAGTCT+AGG - Chr4:58538739-58538758 None:intergenic 40.0%
! AATACCACACTTTTCGACCA+CGG + Chr4:58540957-58540976 MsG0480021488.01.T01:intron 40.0%
! AATTCTGAAGGTTCTTCTGG+AGG + Chr4:58541664-58541683 MsG0480021488.01.T01:CDS 40.0%
! ACTGTTCTTTTTGCTGCGTA+TGG - Chr4:58539642-58539661 None:intergenic 40.0%
! AGTAGTGAGGATAGTTTTCG+CGG + Chr4:58536529-58536548 MsG0480021488.01.T01:CDS 40.0%
! ATAGAGGTGGACTTGAGAAT+TGG + Chr4:58536662-58536681 MsG0480021488.01.T01:CDS 40.0%
! ATATGGTGTTAGGGAAGTTG+TGG + Chr4:58536632-58536651 MsG0480021488.01.T01:CDS 40.0%
! CAAAAAAGTGGAGTACCAAG+AGG - Chr4:58537326-58537345 None:intergenic 40.0%
! CTCATTGGAATAGTACTGAG+GGG + Chr4:58537018-58537037 MsG0480021488.01.T01:intron 40.0%
! CTGAGGCTATTGTGTGTTTT+AGG + Chr4:58537588-58537607 MsG0480021488.01.T01:intron 40.0%
! GATTATCTCTAGATTGGCTG+TGG + Chr4:58538625-58538644 MsG0480021488.01.T01:intron 40.0%
! GCTCATTGGAATAGTACTGA+GGG + Chr4:58537017-58537036 MsG0480021488.01.T01:intron 40.0%
! GGAAGCATAATTGTTGTTGC+AGG - Chr4:58536053-58536072 None:intergenic 40.0%
! GGATAGTAGCATCTGAAACA+GGG + Chr4:58541548-58541567 MsG0480021488.01.T01:CDS 40.0%
! TATTCTGGCCTTTCTCTTGT+AGG + Chr4:58538683-58538702 MsG0480021488.01.T01:intron 40.0%
! TCTAGATTGGCTGTGGAAAT+TGG + Chr4:58538632-58538651 MsG0480021488.01.T01:intron 40.0%
! TCTGAAACAGGGTTTACCAA+AGG + Chr4:58541559-58541578 MsG0480021488.01.T01:CDS 40.0%
! TGGAATGCCAATTTGGAATC+AGG + Chr4:58539685-58539704 MsG0480021488.01.T01:CDS 40.0%
! TTTGACTATTGGTACTGGAG+AGG + Chr4:58539867-58539886 MsG0480021488.01.T01:intron 40.0%
!! AATATTTTCTGGCGTGTGCT+GGG + Chr4:58540548-58540567 MsG0480021488.01.T01:CDS 40.0%
!! AGAGAGTTTTGTGGTGATGT+TGG + Chr4:58540678-58540697 MsG0480021488.01.T01:intron 40.0%
!! AGTTTTGTGGTGATGTTGGT+GGG + Chr4:58540682-58540701 MsG0480021488.01.T01:intron 40.0%
!! CATCCAACTTTTTCCCTACT+AGG - Chr4:58540614-58540633 None:intergenic 40.0%
!! CCTAGTGCTGATAATTCTGA+AGG + Chr4:58541652-58541671 MsG0480021488.01.T01:CDS 40.0%
!! CTGAATGCTTTGGAGTGTAT+CGG + Chr4:58540418-58540437 MsG0480021488.01.T01:intron 40.0%
!! GTATCGATTAACATGGTCCA+AGG + Chr4:58539206-58539225 MsG0480021488.01.T01:intron 40.0%
!! GTCGTTGATGGTGTTAAATC+TGG + Chr4:58538817-58538836 MsG0480021488.01.T01:CDS 40.0%
!! TGAATGCTTTGGAGTGTATC+GGG + Chr4:58540419-58540438 MsG0480021488.01.T01:intron 40.0%
!! TTTTGGAGAAGGATTTGCAG+AGG + Chr4:58536587-58536606 MsG0480021488.01.T01:CDS 40.0%
!!! CTTGGTACTCCACTTTTTTG+TGG + Chr4:58537326-58537345 MsG0480021488.01.T01:intron 40.0%
!!! GGTTGGGGTTTTTTACGAAA+GGG + Chr4:58541292-58541311 MsG0480021488.01.T01:CDS 40.0%
!!! TAACTTCTGCTTTTTCGGGT+TGG - Chr4:58539812-58539831 None:intergenic 40.0%
!!! TTATTTTAGTGGAGTGGTGG+TGG + Chr4:58538008-58538027 MsG0480021488.01.T01:intron 40.0%
AAATCCCAGCACGTTAAAGG+AGG - Chr4:58540883-58540902 None:intergenic 45.0%
AAGTGGGAAGAGGAATGGAA+TGG - Chr4:58535829-58535848 None:intergenic 45.0%
ACATATGGATCTGTCTTGCC+TGG - Chr4:58539596-58539615 None:intergenic 45.0%
ACGTGAATTGAGGGATTCAC+AGG + Chr4:58536312-58536331 MsG0480021488.01.T01:CDS 45.0%
AGAGGAAAGAGTCGGTTGAA+TGG + Chr4:58536605-58536624 MsG0480021488.01.T01:CDS 45.0%
AGTAAGAGATTCTGCGTACC+CGG + Chr4:58541465-58541484 MsG0480021488.01.T01:CDS 45.0%
ATAGGCCTTAGGTATACTGG+AGG + Chr4:58537672-58537691 MsG0480021488.01.T01:CDS 45.0%
ATCCAAGTTAAGGACGCTCT+GGG + Chr4:58539835-58539854 MsG0480021488.01.T01:CDS 45.0%
ATGCTTGGGAATGTTGGAAG+TGG - Chr4:58535846-58535865 None:intergenic 45.0%
CAATTCTGGTGAGGCTCATT+CGG - Chr4:58540293-58540312 None:intergenic 45.0%
CAGATAGGCCTTAGGTATAC+TGG + Chr4:58537669-58537688 MsG0480021488.01.T01:CDS 45.0%
CAGTATACCTAAGGCCTATC+TGG - Chr4:58537671-58537690 None:intergenic 45.0%
CATCTGAAGACTGACTACCT+TGG - Chr4:58539169-58539188 None:intergenic 45.0%
CCAGCAACGTTTCGGTTAAT+AGG - Chr4:58536433-58536452 None:intergenic 45.0%
CCTATTAACCGAAACGTTGC+TGG + Chr4:58536430-58536449 MsG0480021488.01.T01:CDS 45.0%
CTAGATACCAGATAGGCCTT+AGG + Chr4:58537661-58537680 MsG0480021488.01.T01:intron 45.0%
CTTAGTCGCTGAAAGAACTG+TGG + Chr4:58540497-58540516 MsG0480021488.01.T01:intron 45.0%
GAGGAAAGAGTCGGTTGAAT+GGG + Chr4:58536606-58536625 MsG0480021488.01.T01:CDS 45.0%
GAGGGATTCACAGGTTCAAT+TGG + Chr4:58536321-58536340 MsG0480021488.01.T01:CDS 45.0%
GCAACGTTTCGGTTAATAGG+AGG - Chr4:58536430-58536449 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG + Chr4:58537138-58537157 MsG0480021488.01.T01:intron 45.0%
GGAAGAGGAATGGAATGGAA+TGG - Chr4:58535824-58535843 None:intergenic 45.0%
GGATTTGCAGAGGAAAGAGT+CGG + Chr4:58536597-58536616 MsG0480021488.01.T01:CDS 45.0%
GGGATGAACCTTTGTCTGTT+AGG + Chr4:58536770-58536789 MsG0480021488.01.T01:CDS 45.0%
GGTCCTAGTAGGGAAAAAGT+TGG + Chr4:58540608-58540627 MsG0480021488.01.T01:CDS 45.0%
GTAATGAAGGGGTCCTAGTA+GGG + Chr4:58540598-58540617 MsG0480021488.01.T01:CDS 45.0%
GTCATGTGACTGTAAGGTCA+CGG + Chr4:58537069-58537088 MsG0480021488.01.T01:intron 45.0%
GTCGGTTGAATGGGTGAATA+TGG + Chr4:58536615-58536634 MsG0480021488.01.T01:CDS 45.0%
TAATAGGAGGCGATGGAATC+GGG - Chr4:58536417-58536436 None:intergenic 45.0%
TATCCAAGTTAAGGACGCTC+TGG + Chr4:58539834-58539853 MsG0480021488.01.T01:CDS 45.0%
TCATGTGACTGTAAGGTCAC+GGG + Chr4:58537070-58537089 MsG0480021488.01.T01:intron 45.0%
TGAGGAAGATGACAAGACTG+AGG + Chr4:58541366-58541385 MsG0480021488.01.T01:CDS 45.0%
TGCCACTACACTGAATGCTT+TGG + Chr4:58540408-58540427 MsG0480021488.01.T01:intron 45.0%
TGCGTATGGTTTGATCTCCA+AGG - Chr4:58539628-58539647 None:intergenic 45.0%
TGCTTGGGAATGTTGGAAGT+GGG - Chr4:58535845-58535864 None:intergenic 45.0%
TGTAATGAAGGGGTCCTAGT+AGG + Chr4:58540597-58540616 MsG0480021488.01.T01:CDS 45.0%
TTCGAGAAGGGAAAAGCTGT+TGG + Chr4:58538775-58538794 MsG0480021488.01.T01:CDS 45.0%
TTGTCCTCCTTTAACGTGCT+GGG + Chr4:58540876-58540895 MsG0480021488.01.T01:intron 45.0%
TTTCGGTTAATAGGAGGCGA+TGG - Chr4:58536424-58536443 None:intergenic 45.0%
! AGGAGGAATTGATTCCGCAT+TGG - Chr4:58541635-58541654 None:intergenic 45.0%
! ATAGTACTGAGGGGTAACCT+TGG + Chr4:58537027-58537046 MsG0480021488.01.T01:intron 45.0%
! ATTGATTCCGCATTGGCAAC+AGG - Chr4:58541628-58541647 None:intergenic 45.0%
! CTCCAAAGCATTCAGTGTAG+TGG - Chr4:58540413-58540432 None:intergenic 45.0%
! CTTTTGTGCATCATTGGGCA+TGG + Chr4:58538295-58538314 MsG0480021488.01.T01:intron 45.0%
! GGGATAGTAGCATCTGAAAC+AGG + Chr4:58541547-58541566 MsG0480021488.01.T01:CDS 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - Chr4:58537103-58537122 None:intergenic 45.0%
! TTTTACGAAAGGGCTCGTCT+GGG + Chr4:58541302-58541321 MsG0480021488.01.T01:CDS 45.0%
! TTTTTACGAAAGGGCTCGTC+TGG + Chr4:58541301-58541320 MsG0480021488.01.T01:CDS 45.0%
!! GAATATTTTCTGGCGTGTGC+TGG + Chr4:58540547-58540566 MsG0480021488.01.T01:CDS 45.0%
!! GAGTTTTGTGGTGATGTTGG+TGG + Chr4:58540681-58540700 MsG0480021488.01.T01:intron 45.0%
!! TCGGGTTGGAAACAAGCATA+TGG - Chr4:58539798-58539817 None:intergenic 45.0%
!! TGTTGCTTTACAAGGGGGTT+GGG + Chr4:58541276-58541295 MsG0480021488.01.T01:CDS 45.0%
!! TTGTTGCTTTACAAGGGGGT+TGG + Chr4:58541275-58541294 MsG0480021488.01.T01:CDS 45.0%
!!! CATGGTTTTGGAAAGGGGAA+AGG - Chr4:58536089-58536108 None:intergenic 45.0%
!!! GGGTTGGGGTTTTTTACGAA+AGG + Chr4:58541291-58541310 MsG0480021488.01.T01:CDS 45.0%
!!! TTTTTTGTGGCACGAGGCAA+GGG + Chr4:58537339-58537358 MsG0480021488.01.T01:intron 45.0%
!!! TTTTTTATTTTTTATTTTAG+TGG + Chr4:58537997-58538016 MsG0480021488.01.T01:intron 5.0%
AACGACAGGACCAACAGTGA+CGG - Chr4:58538803-58538822 None:intergenic 50.0%
AAGGCGGTGAACGTGAATTG+AGG + Chr4:58536302-58536321 MsG0480021488.01.T01:CDS 50.0%
ACACAATAGCCTCAGACCTC+AGG - Chr4:58537583-58537602 None:intergenic 50.0%
ACACAGCTAGTCAGCAACAG+AGG - Chr4:58540243-58540262 None:intergenic 50.0%
ACTGTTGGTCCTGTCGTTGA+TGG + Chr4:58538805-58538824 MsG0480021488.01.T01:CDS 50.0%
AGGCGGTGAACGTGAATTGA+GGG + Chr4:58536303-58536322 MsG0480021488.01.T01:CDS 50.0%
AGTCAGCAACAGAGGAGGAA+GGG - Chr4:58540235-58540254 None:intergenic 50.0%
ATACCAACAGCTCCTTGGGT+CGG + Chr4:58537807-58537826 MsG0480021488.01.T01:CDS 50.0%
CAACTTTACCAGTTGCGCCA+AGG - Chr4:58537047-58537066 None:intergenic 50.0%
CAAGGGAATAGACTCGCTGT+TGG + Chr4:58537356-58537375 MsG0480021488.01.T01:intron 50.0%
CGAATGAGCCTCACCAGAAT+TGG + Chr4:58540291-58540310 MsG0480021488.01.T01:intron 50.0%
CGTCTGGGGAGATATTGCTT+AGG + Chr4:58541317-58541336 MsG0480021488.01.T01:CDS 50.0%
GAGCACCTCCAGTATACCTA+AGG - Chr4:58537680-58537699 None:intergenic 50.0%
GGAAGATGACAAGACTGAGG+AGG + Chr4:58541369-58541388 MsG0480021488.01.T01:CDS 50.0%
GGAATGTTGGAAGTGGGAAG+AGG - Chr4:58535839-58535858 None:intergenic 50.0%
GGTGTTAGGGAAGTTGTGGA+AGG + Chr4:58536636-58536655 MsG0480021488.01.T01:CDS 50.0%
GGTTTCGGTAAGGGAAGAGA+GGG + Chr4:58540653-58540672 MsG0480021488.01.T01:intron 50.0%
GTTGGAAGTGGGAAGAGGAA+TGG - Chr4:58535834-58535853 None:intergenic 50.0%
GTTGTCCTCCTTTAACGTGC+TGG + Chr4:58540875-58540894 MsG0480021488.01.T01:intron 50.0%
GTTTCGGTAAGGGAAGAGAG+GGG + Chr4:58540654-58540673 MsG0480021488.01.T01:intron 50.0%
TAGTCAGCAACAGAGGAGGA+AGG - Chr4:58540236-58540255 None:intergenic 50.0%
TCGAGCATCCACAAGAGTGA+CGG - Chr4:58538884-58538903 None:intergenic 50.0%
TGAACTCTCCGTCACTCTTG+TGG + Chr4:58538873-58538892 MsG0480021488.01.T01:CDS 50.0%
TGCCTCGTGCCACAAAAAAG+TGG - Chr4:58537338-58537357 None:intergenic 50.0%
TTTACGAAAGGGCTCGTCTG+GGG + Chr4:58541303-58541322 MsG0480021488.01.T01:CDS 50.0%
! AGGATAGTTTTCGCGGTGTG+TGG + Chr4:58536536-58536555 MsG0480021488.01.T01:CDS 50.0%
! ATCCCAGAGCGTCCTTAACT+TGG - Chr4:58539840-58539859 None:intergenic 50.0%
! ATGTTCATGGGAAGGGTGCA+GGG + Chr4:58540631-58540650 MsG0480021488.01.T01:CDS 50.0%
! GACTCGCTGTTGGTGTGTTT+TGG + Chr4:58537366-58537385 MsG0480021488.01.T01:intron 50.0%
! GAGAGGGGAAGAGAGTTTTG+TGG + Chr4:58540669-58540688 MsG0480021488.01.T01:intron 50.0%
! GAGTGTATCGGGCATGGTTT+TGG + Chr4:58540430-58540449 MsG0480021488.01.T01:intron 50.0%
! GTTGCTTTACAAGGGGGTTG+GGG + Chr4:58541277-58541296 MsG0480021488.01.T01:CDS 50.0%
!! TAGTGGAGTGGTGGTGGAAA+TGG + Chr4:58538014-58538033 MsG0480021488.01.T01:intron 50.0%
!! TCGCTGTTGGTGTGTTTTGG+TGG + Chr4:58537369-58537388 MsG0480021488.01.T01:intron 50.0%
!!! CGCTGTTGGTGTGTTTTGGT+GGG + Chr4:58537370-58537389 MsG0480021488.01.T01:intron 50.0%
!!! CTCCACTTTTTTGTGGCACG+AGG + Chr4:58537333-58537352 MsG0480021488.01.T01:intron 50.0%
!!! CTTTTTTGTGGCACGAGGCA+AGG + Chr4:58537338-58537357 MsG0480021488.01.T01:intron 50.0%
AAGGTCACGGGTTCAAGTCC+TGG + Chr4:58537082-58537101 MsG0480021488.01.T01:intron 55.0%
ACGACAGGACCAACAGTGAC+GGG - Chr4:58538802-58538821 None:intergenic 55.0%
CAGCTAGTCAGCAACAGAGG+AGG - Chr4:58540240-58540259 None:intergenic 55.0%
GCAATCTCCACCCAAGCCAA+TGG - Chr4:58540708-58540727 None:intergenic 55.0%
GGGTTTCGGTAAGGGAAGAG+AGG + Chr4:58540652-58540671 MsG0480021488.01.T01:intron 55.0%
TTGGGTCGGAGCTGCTTCAT+GGG + Chr4:58537821-58537840 MsG0480021488.01.T01:CDS 55.0%
! ACCACACTTTTCGACCACGG+TGG + Chr4:58540960-58540979 MsG0480021488.01.T01:intron 55.0%
! ATGTTGGTGGGCCATTGGCT+TGG + Chr4:58540694-58540713 MsG0480021488.01.T01:intron 55.0%
! GATGTTCATGGGAAGGGTGC+AGG + Chr4:58540630-58540649 MsG0480021488.01.T01:CDS 55.0%
! TGGTGATGTTGGTGGGCCAT+TGG + Chr4:58540689-58540708 MsG0480021488.01.T01:intron 55.0%
! TGTTCATGGGAAGGGTGCAG+GGG + Chr4:58540632-58540651 MsG0480021488.01.T01:CDS 55.0%
!! GCTTTGGAGTGTATCGGGCA+TGG + Chr4:58540424-58540443 MsG0480021488.01.T01:intron 55.0%
!! TGTTGGTGGGCCATTGGCTT+GGG + Chr4:58540695-58540714 MsG0480021488.01.T01:intron 55.0%
ACTACTGTCATTGGCGCCCC+TGG + Chr4:58539665-58539684 MsG0480021488.01.T01:CDS 60.0%
ACTGAAGCTCCCGCATACGC+AGG - Chr4:58537179-58537198 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + Chr4:58537036-58537055 MsG0480021488.01.T01:intron 60.0%
AGGGTGCAGGGGTTTCGGTA+AGG + Chr4:58540643-58540662 MsG0480021488.01.T01:intron 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG + Chr4:58537183-58537202 MsG0480021488.01.T01:intron 60.0%
CATGAAGCAGCTCCGACCCA+AGG - Chr4:58537822-58537841 None:intergenic 60.0%
CTGAAGCTCCCGCATACGCA+GGG - Chr4:58537178-58537197 None:intergenic 60.0%
CTGGCGTGTGCTGGGAACAA+TGG + Chr4:58540556-58540575 MsG0480021488.01.T01:CDS 60.0%
CTTGGGTCGGAGCTGCTTCA+TGG + Chr4:58537820-58537839 MsG0480021488.01.T01:CDS 60.0%
GCCACCGTGGTCGAAAAGTG+TGG - Chr4:58540964-58540983 None:intergenic 60.0%
GCGCCCCTGGAATGCCAATT+TGG + Chr4:58539678-58539697 MsG0480021488.01.T01:CDS 60.0%
GCTGTTGGTCCCGTCACTGT+TGG + Chr4:58538790-58538809 MsG0480021488.01.T01:CDS 60.0%
GGGTGCAGGGGTTTCGGTAA+GGG + Chr4:58540644-58540663 MsG0480021488.01.T01:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + Chr4:58537151-58537170 MsG0480021488.01.T01:intron 60.0%
! GTTTTGCAATGGGGCCACCG+TGG - Chr4:58540977-58540996 None:intergenic 60.0%
! TGGGAAGGGTGCAGGGGTTT+CGG + Chr4:58540638-58540657 MsG0480021488.01.T01:CDS 60.0%
CATACGCAGGGTCCGGGAAG+GGG - Chr4:58537166-58537185 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG - Chr4:58537153-58537172 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG + Chr4:58537166-58537185 MsG0480021488.01.T01:intron 65.0%
GCATACGCAGGGTCCGGGAA+GGG - Chr4:58537167-58537186 None:intergenic 65.0%
GCTCCGACCCAAGGAGCTGT+TGG - Chr4:58537813-58537832 None:intergenic 65.0%
TGCGGGAGCTTCAGTGCACC+GGG + Chr4:58537184-58537203 MsG0480021488.01.T01:intron 65.0%
TTCCCGGACCCTGCGTATGC+GGG + Chr4:58537167-58537186 MsG0480021488.01.T01:intron 65.0%
!! TGGTGGGCCATTGGCTTGGG+TGG + Chr4:58540698-58540717 MsG0480021488.01.T01:intron 65.0%
CGCATACGCAGGGTCCGGGA+AGG - Chr4:58537168-58537187 None:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG - Chr4:58537172-58537191 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG - Chr4:58537173-58537192 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 58535794 58541714 58535794 ID=MsG0480021488.01;Name=MsG0480021488.01
Chr4 mRNA 58535794 58541714 58535794 ID=MsG0480021488.01.T01;Parent=MsG0480021488.01;Name=MsG0480021488.01.T01;_AED=0.33;_eAED=0.41;_QI=210|0.42|0.37|1|1|1|8|0|748
Chr4 exon 58535794 58536833 58535794 ID=MsG0480021488.01.T01:exon:17296;Parent=MsG0480021488.01.T01
Chr4 exon 58537665 58537917 58537665 ID=MsG0480021488.01.T01:exon:17297;Parent=MsG0480021488.01.T01
Chr4 exon 58538017 58538123 58538017 ID=MsG0480021488.01.T01:exon:17298;Parent=MsG0480021488.01.T01
Chr4 exon 58538705 58538922 58538705 ID=MsG0480021488.01.T01:exon:17299;Parent=MsG0480021488.01.T01
Chr4 exon 58539597 58539706 58539597 ID=MsG0480021488.01.T01:exon:17300;Parent=MsG0480021488.01.T01
Chr4 exon 58539790 58539877 58539790 ID=MsG0480021488.01.T01:exon:17301;Parent=MsG0480021488.01.T01
Chr4 exon 58540502 58540659 58540502 ID=MsG0480021488.01.T01:exon:17302;Parent=MsG0480021488.01.T01
Chr4 exon 58541232 58541714 58541232 ID=MsG0480021488.01.T01:exon:17303;Parent=MsG0480021488.01.T01
Chr4 five_prime_UTR 58535794 58536003 58535794 ID=MsG0480021488.01.T01:five_prime_utr;Parent=MsG0480021488.01.T01
Chr4 CDS 58536004 58536833 58536004 ID=MsG0480021488.01.T01:cds;Parent=MsG0480021488.01.T01
Chr4 CDS 58537665 58537917 58537665 ID=MsG0480021488.01.T01:cds;Parent=MsG0480021488.01.T01
Chr4 CDS 58538017 58538123 58538017 ID=MsG0480021488.01.T01:cds;Parent=MsG0480021488.01.T01
Chr4 CDS 58538705 58538922 58538705 ID=MsG0480021488.01.T01:cds;Parent=MsG0480021488.01.T01
Chr4 CDS 58539597 58539706 58539597 ID=MsG0480021488.01.T01:cds;Parent=MsG0480021488.01.T01
Chr4 CDS 58539790 58539877 58539790 ID=MsG0480021488.01.T01:cds;Parent=MsG0480021488.01.T01
Chr4 CDS 58540502 58540659 58540502 ID=MsG0480021488.01.T01:cds;Parent=MsG0480021488.01.T01
Chr4 CDS 58541232 58541714 58541232 ID=MsG0480021488.01.T01:cds;Parent=MsG0480021488.01.T01
Gene Sequence

>MsG0480021488.01.T01

ATGATTCTTCAACAAGCTTCTCCTACTTTTCACTTCTCTCTTTGTCCCTGCAACAACAATTATGCTTCCAATTCTCTTCTTTCCTTTCCCCTTTCCAAAACCATGAAAAAACGCTTATTTTCAAATCACTACTCATATCGCAAATTTCGTAGAAAAAAATGGACCCTTTATTCATCTTCAATTCAAAAACAATCTACAACTACTTCCCATCCAAAATTCGCTAATTCTGCTAAAAGGGGTGCAAAAAGTTTTGTTTTTGATGACAGAATTTCAAATTCAAATGATGAACTTGAAGTTGAAGGCGGTGAACGTGAATTGAGGGATTCACAGGTTCAATTGGGTTCAAATTTTACTACTTTTCAAGAGGATCCAATTGTGGATAAGCTTAGAACTCAATTGGGTGTGATTCACCCGATTCCATCGCCTCCTATTAACCGAAACGTTGCTGGTTTGTTTGTGTTTTTTTTCTTTGTTGGTGTTGTTTTTGATAAATTATGGACTTTTAGAAGAAGGAGGAACAAAGTTAGTAGTGAGGATAGTTTTCGCGGTGTGTGGCCGCAAGTGCCTACTAGTTTTTCTCTGTTTTTGGAGAAGGATTTGCAGAGGAAAGAGTCGGTTGAATGGGTGAATATGGTGTTAGGGAAGTTGTGGAAGGTTTATAGAGGTGGACTTGAGAATTGGATTATTGGGTTGCTTCAACCTGTTATTGATGATTTGAAGAAGCCTGATTATGTTGAAAGGGTTGAGATTAAGCAGTTCTCGTTAGGGGATGAACCTTTGTCTGTTAGGAATGTTGAACGTAGGACTTCTCGCCGTGTCAATGATTTACAATACCAGATAGGCCTTAGGTATACTGGAGGTGCTCGCATGCTGTTAAGCCTTTCTCTGAAATTTGGTATTATTCCAATTGTTGTACCTGTTGGTGTTCGAGATTTTGACATTGATGGTGAACTTTGGGTAAAATTGAGATTAATACCAACAGCTCCTTGGGTCGGAGCTGCTTCATGGGCTTTTGTTTCACTTCCAAAGATCAAGTTTGAACTGTCTCCATTTCGTTTGTTCAACTTAATGGGTATGTCAAATTGGAGTGGTGGTGGAAATGGTAACACTCTTGATCACTTGGTTGTAGAAGCTCTAATACAATGTGATGAAACAACTCTCCCAAACTATTGGGTTAAAACTTGGGGATTGTTTTTGACCAAACTTCTTACAGTAGATTTACCTAGACTATTTGTACGGCCAAACAAAATTGTTTTGGATTTCGAGAAGGGAAAAGCTGTTGGTCCCGTCACTGTTGGTCCTGTCGTTGATGGTGTTAAATCTGGAGAAATGCAAGAAGGAAACATGGATTCTGTTGGTGAACTCTCCGTCACTCTTGTGGATGCTCGAAAGCTTCCTTATTTTTTTGGCAAGACAGATCCATATGTCATTCTTAGCCTTGGAGATCAAACCATACGCAGCAAAAAGAACAGTCAAACTACTGTCATTGGCGCCCCTGGAATGCCAATTTGGAATCAGGATTTCCATATGCTTGTTTCCAACCCGAAAAAGCAGAAGTTAAGTATCCAAGTTAAGGACGCTCTGGGATTTGCAGATTTGACTATTGTCGCTGAAAGAACTGTGGCCTTTAAAAATAAGAAGCCCAAAGGTAGAATATTTTCTGGCGTGTGCTGGGAACAATGGTGTAGACAGCTTTCAATGTGTAATGAAGGGGTCCTAGTAGGGAAAAAGTTGGATGTTCATGGGAAGGGTGCAGGGGTTTCGGTTGATTTGGGATCTCTTCAAGACACTGTACCAACAGACAGAATTGTTGCTTTACAAGGGGGTTGGGGTTTTTTACGAAAGGGCTCGTCTGGGGAGATATTGCTTAGGCTAACATATAAAGCATATGTGGAGGATGAGGAAGATGACAAGACTGAGGAGGATTCCATTGATATAGATGTTTCAGACGATGAGTTGTCTGATATAGAAGAAGCAAATGTCACTGATACGATGGGAGTAAGAGATTCTGCGTACCCGGCAGATAAAGAATCATTTATGGATGTTTTGGCTGCAATAATTGTTAGCGAAGAATTCCAAGGGATAGTAGCATCTGAAACAGGGTTTACCAAAGGTTTGGATAATGGCTCAAATACAGGGTCTAAAGTATCAAAATCTCCTGTTGCCAATGCGGAATCAATTCCTCCTAGTGCTGATAATTCTGAAGGTTCTTCTGGAGGTACCATACTCTTAGAATCTCTAATTTAA
Protein sequence

>MsG0480021488.01.T01

MILQQASPTFHFSLCPCNNNYASNSLLSFPLSKTMKKRLFSNHYSYRKFRRKKWTLYSSSIQKQSTTTSHPKFANSAKRGAKSFVFDDRISNSNDELEVEGGERELRDSQVQLGSNFTTFQEDPIVDKLRTQLGVIHPIPSPPINRNVAGLFVFFFFVGVVFDKLWTFRRRRNKVSSEDSFRGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGLENWIIGLLQPVIDDLKKPDYVERVEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLSLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTAPWVGAASWAFVSLPKIKFELSPFRLFNLMGMSNWSGGGNGNTLDHLVVEALIQCDETTLPNYWVKTWGLFLTKLLTVDLPRLFVRPNKIVLDFEKGKAVGPVTVGPVVDGVKSGEMQEGNMDSVGELSVTLVDARKLPYFFGKTDPYVILSLGDQTIRSKKNSQTTVIGAPGMPIWNQDFHMLVSNPKKQKLSIQVKDALGFADLTIVAERTVAFKNKKPKGRIFSGVCWEQWCRQLSMCNEGVLVGKKLDVHGKGAGVSVDLGSLQDTVPTDRIVALQGGWGFLRKGSSGEILLRLTYKAYVEDEEDDKTEEDSIDIDVSDDELSDIEEANVTDTMGVRDSAYPADKESFMDVLAAIIVSEEFQGIVASETGFTKGLDNGSNTGSKVSKSPVANAESIPPSADNSEGSSGGTILLESLI*