AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021739.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021739.01.T01 MTR_4g074370 80.208 192 33 1 59 245 178 369 5.69e-98 301
MsG0480021739.01.T01 MTR_4g074370 74.194 62 16 0 46 107 90 151 1.32e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021739.01.T01 AT3G19830 79.330 179 37 0 76 254 198 376 2.24e-93 289
MsG0480021739.01.T01 AT3G19830 79.330 179 37 0 76 254 198 376 2.24e-93 289
MsG0480021739.01.T01 AT3G19830 79.330 179 37 0 76 254 198 376 2.24e-93 289
MsG0480021739.01.T01 AT3G19830 79.330 179 37 0 76 254 198 376 2.24e-93 289
MsG0480021739.01.T01 AT1G50260 73.770 183 43 1 68 245 173 355 1.98e-77 247
MsG0480021739.01.T01 AT1G50260 77.193 171 34 1 68 233 173 343 1.64e-76 244

Find 71 sgRNAs with CRISPR-Local

Find 367 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTCGTTTGTTCAACTTAA+TGG 0.132446 4:-63728400 MsG0480021739.01.T01:CDS
TTAAGCCTTTCTCTGAAATT+TGG 0.173257 4:-63728576 MsG0480021739.01.T01:CDS
GCATCTATAAAGTTCCTTTC+TGG 0.204155 4:+63734265 None:intergenic
GGACTTGAGAATTGGATTAT+TGG 0.248656 4:-63729400 MsG0480021739.01.T01:CDS
CTTGGGTCGGAGCTGCTTCA+TGG 0.263197 4:-63728464 MsG0480021739.01.T01:CDS
GACAGTTCAAACTTGATCTT+TGG 0.263404 4:+63728426 None:intergenic
GACTTGAGAATTGGATTATT+GGG 0.298406 4:-63729399 MsG0480021739.01.T01:CDS
TTTCGTTTGTTCAACTTAAT+GGG 0.307586 4:-63728399 MsG0480021739.01.T01:CDS
GGGATGAACCTTTGTCTGTT+AGG 0.310807 4:-63729300 MsG0480021739.01.T01:CDS
CAGTATACCTAAGGCCTATC+TGG 0.314663 4:+63728616 None:intergenic
TCAACCCTTTCAACATAATC+AGG 0.328171 4:+63729343 None:intergenic
GGATGGATGGACACAGGTTT+AGG 0.339196 4:-63734310 MsG0480021739.01.T01:CDS
TATTACAGATCCATGTGTTC+CGG 0.339209 4:+63734211 None:intergenic
GAGATTAAGCAGTTCTCGTT+AGG 0.346911 4:-63729322 MsG0480021739.01.T01:CDS
CTTTCTGGCAAAGGATCGTT+TGG 0.351471 4:+63734280 None:intergenic
GAGGGATTCACAGGTTCAAT+TGG 0.357792 4:-63729748 MsG0480021739.01.T01:CDS
GGATAAGCTTAGAACTCAAT+TGG 0.361720 4:-63729688 MsG0480021739.01.T01:CDS
CAGATAGGCCTTAGGTATAC+TGG 0.362284 4:-63728615 MsG0480021739.01.T01:CDS
TTCTTCAAATCATCAATAAC+AGG 0.371788 4:+63729367 None:intergenic
ATAGAGGTGGACTTGAGAAT+TGG 0.388213 4:-63729408 MsG0480021739.01.T01:CDS
GTTCTAAGCTTATCCACAAT+TGG 0.393077 4:+63729696 None:intergenic
ATTACAGATCCATGTGTTCC+GGG 0.395693 4:+63734212 None:intergenic
ACACCAACAGGTACAACAAT+TGG 0.410509 4:+63728546 None:intergenic
ACAATGCATATCCCCATGTT+TGG 0.415530 4:-63734331 MsG0480021739.01.T01:CDS
CAAACGATCCTTTGCCAGAA+AGG 0.424662 4:-63734279 MsG0480021739.01.T01:CDS
TGACATTGATGGTGAACTTT+GGG 0.426042 4:-63728514 MsG0480021739.01.T01:CDS
AAGGAACTTTATAGATGCAT+TGG 0.433745 4:-63734260 MsG0480021739.01.T01:CDS
TAATACCAAATTTCAGAGAA+AGG 0.439413 4:+63728571 None:intergenic
ATTAATACCAACAGCTCCTT+GGG 0.443767 4:-63728481 MsG0480021739.01.T01:CDS
ATTAAGTTGAACAAACGAAA+TGG 0.449004 4:+63728402 None:intergenic
TCAAAATCTCGAACACCAAC+AGG 0.452033 4:+63728534 None:intergenic
TTGGGTCGGAGCTGCTTCAT+GGG 0.457177 4:-63728463 MsG0480021739.01.T01:CDS
TTGACATTGATGGTGAACTT+TGG 0.460520 4:-63728515 MsG0480021739.01.T01:CDS
AATGATGAACTTGAAGTTGA+AGG 0.462989 4:-63729786 MsG0480021739.01.T01:CDS
AGGAACTTTATAGATGCATT+GGG 0.465996 4:-63734259 MsG0480021739.01.T01:CDS
GATTAATACCAACAGCTCCT+TGG 0.474206 4:-63728482 MsG0480021739.01.T01:CDS
AGGGATTCACAGGTTCAATT+GGG 0.482120 4:-63729747 MsG0480021739.01.T01:CDS
AGATTAAGCAGTTCTCGTTA+GGG 0.484229 4:-63729321 MsG0480021739.01.T01:CDS
TATCCCCATGTTTGGATGGA+TGG 0.491928 4:-63734323 MsG0480021739.01.T01:CDS
TTGTGGAAGGTTTATAGAGG+TGG 0.495319 4:-63729421 MsG0480021739.01.T01:CDS
ATAAAGTTCCTTTCTGGCAA+AGG 0.498865 4:+63734271 None:intergenic
AAGTTGTGGAAGGTTTATAG+AGG 0.500887 4:-63729424 MsG0480021739.01.T01:CDS
GATAAGCTTAGAACTCAATT+GGG 0.503313 4:-63729687 MsG0480021739.01.T01:intron
ATTCCAATTGTTGTACCTGT+TGG 0.505566 4:-63728549 MsG0480021739.01.T01:CDS
CTAGATACCAGATAGGCCTT+AGG 0.509703 4:-63728623 MsG0480021739.01.T01:intron
GGTGTTAGGGAAGTTGTGGA+AGG 0.511394 4:-63729434 MsG0480021739.01.T01:intron
AGGCGGTGAACGTGAATTGA+GGG 0.516382 4:-63729766 MsG0480021739.01.T01:CDS
AGAAGCCTGATTATGTTGAA+AGG 0.533351 4:-63729348 MsG0480021739.01.T01:CDS
AAGGCGGTGAACGTGAATTG+AGG 0.533789 4:-63729767 MsG0480021739.01.T01:CDS
GATGGACACAGGTTTAGGCT+TGG 0.546649 4:-63734305 MsG0480021739.01.T01:CDS
CATGAAGCAGCTCCGACCCA+AGG 0.547246 4:+63728465 None:intergenic
TGTGTCCATCCATCCAAACA+TGG 0.551936 4:+63734318 None:intergenic
TGCATATCCCCATGTTTGGA+TGG 0.555061 4:-63734327 MsG0480021739.01.T01:CDS
ACGTGAATTGAGGGATTCAC+AGG 0.556743 4:-63729757 MsG0480021739.01.T01:CDS
ATATGGTGTTAGGGAAGTTG+TGG 0.559551 4:-63729438 MsG0480021739.01.T01:intron
GAAGCCTGATTATGTTGAAA+GGG 0.562405 4:-63729347 MsG0480021739.01.T01:CDS
GCTCCGACCCAAGGAGCTGT+TGG 0.582843 4:+63728474 None:intergenic
GAAGCACTCAGATCGTAAAG+AGG 0.585630 4:+63728350 None:intergenic
ATGTTTGGATGGATGGACAC+AGG 0.586560 4:-63734316 MsG0480021739.01.T01:CDS
GTGTCCATCCATCCAAACAT+GGG 0.586901 4:+63734319 None:intergenic
TAAACATGCACAGTTGAACC+CGG 0.602299 4:-63734230 MsG0480021739.01.T01:CDS
GATTAAGCAGTTCTCGTTAG+GGG 0.603380 4:-63729320 MsG0480021739.01.T01:CDS
TCAACATTCCTAACAGACAA+AGG 0.608428 4:+63729292 None:intergenic
CTGTTAGGAATGTTGAACGT+AGG 0.617986 4:-63729285 MsG0480021739.01.T01:CDS
ACAGTTGAACCCGGAACACA+TGG 0.619694 4:-63734221 MsG0480021739.01.T01:CDS
GAGCACCTCCAGTATACCTA+AGG 0.624172 4:+63728607 None:intergenic
ATACCAACAGCTCCTTGGGT+CGG 0.637925 4:-63728477 MsG0480021739.01.T01:CDS
CATACTGTAAATCATTGACA+CGG 0.674498 4:+63729254 None:intergenic
TGTCCATCCATCCAAACATG+GGG 0.683672 4:+63734320 None:intergenic
ATAGGCCTTAGGTATACTGG+AGG 0.717784 4:-63728612 MsG0480021739.01.T01:CDS
GATGAACTTGAAGTTGAAGG+CGG 0.752430 4:-63729783 MsG0480021739.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CGAAATTATAAAAATAAAAA+AGG + Chr4:63730828-63730847 None:intergenic 10.0%
!! TCTATAATATTTAAATTTAG+GGG + Chr4:63731744-63731763 None:intergenic 10.0%
!!! ATATTTCAACATATTTTTAA+AGG + Chr4:63729364-63729383 None:intergenic 10.0%
!!! ATATTTTTAAAGGTTTTTAT+TGG + Chr4:63729354-63729373 None:intergenic 10.0%
!!! TTGATAATAATCAAATAAAT+TGG + Chr4:63731839-63731858 None:intergenic 10.0%
!! AGAAATACAATTACTAAAAA+TGG + Chr4:63733904-63733923 None:intergenic 15.0%
!! ATAAATCCTTATATACATTT+AGG + Chr4:63728514-63728533 None:intergenic 15.0%
!! CTATAATATTTAAATTTAGG+GGG + Chr4:63731743-63731762 None:intergenic 15.0%
!!! ATTTTTAGTAATTGTATTTC+TGG - Chr4:63733903-63733922 MsG0480021739.01.T01:intron 15.0%
!!! TGAATTAATACTTTGAAATT+GGG + Chr4:63732467-63732486 None:intergenic 15.0%
!!! TGACAATGTTTTTTTAAATT+CGG + Chr4:63730471-63730490 None:intergenic 15.0%
!!! TTATTTTTATAATTTCGGAT+GGG - Chr4:63730831-63730850 MsG0480021739.01.T01:intron 15.0%
!!! TTGAATTAATACTTTGAAAT+TGG + Chr4:63732468-63732487 None:intergenic 15.0%
!!! TTTATTTTTATAATTTCGGA+TGG - Chr4:63730830-63730849 MsG0480021739.01.T01:intron 15.0%
!! AAAGTAAATGTAAATTAGTG+AGG + Chr4:63732055-63732074 None:intergenic 20.0%
!! ACACTCACTTAAAAATATTA+AGG - Chr4:63731343-63731362 MsG0480021739.01.T01:intron 20.0%
!! ACATAGTCATAAATCATAAT+AGG - Chr4:63728933-63728952 MsG0480021739.01.T01:intron 20.0%
!! ACTTTAAATGAATGATATGA+TGG - Chr4:63730401-63730420 MsG0480021739.01.T01:intron 20.0%
!! ATGTTATGAAGAAATTGAAT+TGG + Chr4:63732370-63732389 None:intergenic 20.0%
!! TAAAATATTTCTTACCATCT+CGG - Chr4:63729641-63729660 MsG0480021739.01.T01:intron 20.0%
!! TAAATTGTGTTTACTATCAT+TGG - Chr4:63728675-63728694 MsG0480021739.01.T01:intron 20.0%
!! TATAATATACACTGCTAAAT+TGG - Chr4:63728961-63728980 MsG0480021739.01.T01:intron 20.0%
!! TATATAATTCAAACTGCATA+AGG + Chr4:63729312-63729331 None:intergenic 20.0%
!! TATATTGCTTAAGAAATCAA+AGG + Chr4:63730008-63730027 None:intergenic 20.0%
!! TCATAAGATGAGAAAAATAA+TGG - Chr4:63729421-63729440 MsG0480021739.01.T01:CDS 20.0%
!! TTGAATTGAAGATGAATAAA+GGG + Chr4:63732740-63732759 None:intergenic 20.0%
!! TTGCATTTAAATTTATCTAG+AGG - Chr4:63734331-63734350 MsG0480021739.01.T01:CDS 20.0%
!! TTTCTTCATCTATATATTAG+TGG + Chr4:63731294-63731313 None:intergenic 20.0%
!! TTTGAATTGAAGATGAATAA+AGG + Chr4:63732741-63732760 None:intergenic 20.0%
!!! AAATAGTGTTTTGAAGAAAA+CGG - Chr4:63730581-63730600 MsG0480021739.01.T01:intron 20.0%
!!! AAATTTTACTACTTTTCAAG+AGG - Chr4:63732918-63732937 MsG0480021739.01.T01:intron 20.0%
!!! ACTTTTAAGGAAACAATATT+TGG - Chr4:63731541-63731560 MsG0480021739.01.T01:intron 20.0%
!!! ATCACAAAATTTTCCAATTT+TGG - Chr4:63732188-63732207 MsG0480021739.01.T01:intron 20.0%
!!! ATTTTTTGAGTTCATTTTGA+TGG - Chr4:63731027-63731046 MsG0480021739.01.T01:intron 20.0%
!!! CTTCTTTGTTTCTTTTTTTA+AGG + Chr4:63731480-63731499 None:intergenic 20.0%
!!! GTGTTGTTTTTGATAAATTA+TGG - Chr4:63733048-63733067 MsG0480021739.01.T01:intron 20.0%
!!! GTTTGTGTTTTTTTTTTTGT+TGG - Chr4:63733026-63733045 MsG0480021739.01.T01:intron 20.0%
!!! TCATTTTTATATATGCTCAT+TGG - Chr4:63733567-63733586 MsG0480021739.01.T01:intron 20.0%
!!! TGCATAAGATTTAATTTTAG+TGG - Chr4:63728737-63728756 MsG0480021739.01.T01:intron 20.0%
! AAAAACAGAGAAAAACTAGT+AGG + Chr4:63733140-63733159 None:intergenic 25.0%
! AAAATGTAAACTTGAAAGCT+TGG + Chr4:63732426-63732445 None:intergenic 25.0%
! AAAGTGAATGTAAATTAGTG+AGG - Chr4:63731571-63731590 MsG0480021739.01.T01:intron 25.0%
! AAATGTAAACTTGAAAGCTT+GGG + Chr4:63732425-63732444 None:intergenic 25.0%
! AAATTTATGGATATCTCACT+TGG - Chr4:63729789-63729808 MsG0480021739.01.T01:CDS 25.0%
! AAGAAAAAAGACTAGGTAAA+GGG + Chr4:63729907-63729926 None:intergenic 25.0%
! ACATACACCTAAAAACAATA+AGG + Chr4:63731671-63731690 None:intergenic 25.0%
! AGCAAGTTATTTATGTGAAA+AGG - Chr4:63731057-63731076 MsG0480021739.01.T01:intron 25.0%
! AGTCATAATATTAAGGCAAA+AGG - Chr4:63729121-63729140 MsG0480021739.01.T01:intron 25.0%
! ATGAATGATATGATGGTAAA+TGG - Chr4:63730408-63730427 MsG0480021739.01.T01:intron 25.0%
! ATGCAAAAATTGACATTGAA+AGG + Chr4:63730355-63730374 None:intergenic 25.0%
! ATTGTTCAAGAAAAAAGACT+AGG + Chr4:63729914-63729933 None:intergenic 25.0%
! ATTTCGTTTGTTCAACTTAA+TGG - Chr4:63734239-63734258 MsG0480021739.01.T01:CDS 25.0%
! CATAAATTTACCTTAGACAA+TGG + Chr4:63729778-63729797 None:intergenic 25.0%
! CCAAAAAAATTAAGTGTCTT+GGG - Chr4:63730290-63730309 MsG0480021739.01.T01:intron 25.0%
! CTACTAACTAAACAAAATGA+CGG - Chr4:63729256-63729275 MsG0480021739.01.T01:intron 25.0%
! GCAAGTTATTTATGTGAAAA+GGG - Chr4:63731058-63731077 MsG0480021739.01.T01:intron 25.0%
! GTAAATTCCGTAGAAAAAAA+TGG - Chr4:63732713-63732732 MsG0480021739.01.T01:intron 25.0%
! TAATACCAAATTTCAGAGAA+AGG + Chr4:63734071-63734090 None:intergenic 25.0%
! TAGACAAAAGAATGAACAAA+GGG + Chr4:63732533-63732552 None:intergenic 25.0%
! TGATTGCCTAAATGTATATA+AGG - Chr4:63728505-63728524 MsG0480021739.01.T01:CDS 25.0%
! TGTTTAGTTAGTAGGTATAT+GGG + Chr4:63729250-63729269 None:intergenic 25.0%
! TTAATGTTATCTGCTGAAAA+GGG - Chr4:63733506-63733525 MsG0480021739.01.T01:intron 25.0%
! TTATCATATCTTCTGTAGAA+AGG - Chr4:63733859-63733878 MsG0480021739.01.T01:intron 25.0%
! TTATTATGATATTGACCATG+TGG + Chr4:63730563-63730582 None:intergenic 25.0%
! TTCTTCAAATCATCAATAAC+AGG + Chr4:63733275-63733294 None:intergenic 25.0%
! TTGTTTAGTTAGTAGGTATA+TGG + Chr4:63729251-63729270 None:intergenic 25.0%
! TTTAATGTTATCTGCTGAAA+AGG - Chr4:63733505-63733524 MsG0480021739.01.T01:intron 25.0%
! TTTCGTTTGTTCAACTTAAT+GGG - Chr4:63734240-63734259 MsG0480021739.01.T01:CDS 25.0%
!! AATGTTTTATGTGATCTTAC+CGG + Chr4:63728590-63728609 None:intergenic 25.0%
!! ATTTACACCTTAGTGTTTTT+AGG - Chr4:63731700-63731719 MsG0480021739.01.T01:intron 25.0%
!! CAATCAATTCATACGTTTTA+GGG + Chr4:63728491-63728510 None:intergenic 25.0%
!! CACTTTTAAACTTTTACACA+CGG - Chr4:63728626-63728645 MsG0480021739.01.T01:intron 25.0%
!! CATTGTCTAAGGTAAATTTA+TGG - Chr4:63729776-63729795 MsG0480021739.01.T01:CDS 25.0%
!! CTCTAAAAACAATACTATGA+CGG + Chr4:63730763-63730782 None:intergenic 25.0%
!! GCTTAAGTTAAATGTTTTGT+TGG - Chr4:63733758-63733777 MsG0480021739.01.T01:intron 25.0%
!!! AATTATGGACTTTTAGAAGA+AGG - Chr4:63733063-63733082 MsG0480021739.01.T01:intron 25.0%
!!! AATTTTTTTGGGTAGCATTT+GGG + Chr4:63730281-63730300 None:intergenic 25.0%
!!! ACTTACACCTTATTGTTTTT+AGG - Chr4:63731661-63731680 MsG0480021739.01.T01:intron 25.0%
!!! AGTGAGCTTTATTAATCTAA+TGG - Chr4:63729040-63729059 MsG0480021739.01.T01:intron 25.0%
!!! AGTTGGTAGTCATAATATTA+AGG - Chr4:63729114-63729133 MsG0480021739.01.T01:intron 25.0%
!!! ATCTTTTGGGATAAATGATA+GGG + Chr4:63729973-63729992 None:intergenic 25.0%
!!! ATTAAGTTGAACAAACGAAA+TGG + Chr4:63734240-63734259 None:intergenic 25.0%
!!! CCAAGACACTTAATTTTTTT+GGG + Chr4:63730292-63730311 None:intergenic 25.0%
!!! CTCAATGTTTTAACTACATA+AGG - Chr4:63729937-63729956 MsG0480021739.01.T01:intron 25.0%
!!! TAATTTTTTTGGGTAGCATT+TGG + Chr4:63730282-63730301 None:intergenic 25.0%
!!! TACAATTTTTTTATCCCTCT+AGG - Chr4:63730793-63730812 MsG0480021739.01.T01:intron 25.0%
!!! TACTAGTTTTTCTCTGTTTT+TGG - Chr4:63733139-63733158 MsG0480021739.01.T01:intron 25.0%
!!! TATACGCAATTTATTTTCCT+TGG - Chr4:63733987-63734006 MsG0480021739.01.T01:intron 25.0%
AAAAGACTCGTGAAAAGAAT+AGG + Chr4:63730514-63730533 None:intergenic 30.0%
AAAGACTCGTGAAAAGAATA+GGG + Chr4:63730513-63730532 None:intergenic 30.0%
AAGGAACTTTATAGATGCAT+TGG - Chr4:63728379-63728398 MsG0480021739.01.T01:CDS 30.0%
AATGATGAACTTGAAGTTGA+AGG - Chr4:63732853-63732872 MsG0480021739.01.T01:intron 30.0%
AATGGTGAAAAATAAACACG+TGG + Chr4:63728994-63729013 None:intergenic 30.0%
AATTCGCTAATTCTGCTAAA+AGG - Chr4:63732788-63732807 MsG0480021739.01.T01:intron 30.0%
ACACTAAGTATCAAGAATTG+CGG - Chr4:63730910-63730929 MsG0480021739.01.T01:intron 30.0%
AGAAAATATCTCATATGACG+TGG - Chr4:63731954-63731973 MsG0480021739.01.T01:intron 30.0%
AGAAAGTCATTGTGATATTG+TGG + Chr4:63730177-63730196 None:intergenic 30.0%
AGAAGAATTTGAATGAGTTG+AGG + Chr4:63728845-63728864 None:intergenic 30.0%
AGGAACTTTATAGATGCATT+GGG - Chr4:63728380-63728399 MsG0480021739.01.T01:CDS 30.0%
ATATACATCACAATTCAGCT+TGG + Chr4:63728701-63728720 None:intergenic 30.0%
ATCATGAATGGATATGGATA+TGG + Chr4:63732560-63732579 None:intergenic 30.0%
ATTCGCTAATTCTGCTAAAA+GGG - Chr4:63732789-63732808 MsG0480021739.01.T01:intron 30.0%
CAAGAAAAAAGACTAGGTAA+AGG + Chr4:63729908-63729927 None:intergenic 30.0%
CACATCATCTTTGAGTAAAT+GGG + Chr4:63732223-63732242 None:intergenic 30.0%
CACTAACATCATCCAAAAAA+TGG - Chr4:63730126-63730145 MsG0480021739.01.T01:intron 30.0%
CATACTGTAAATCATTGACA+CGG + Chr4:63733388-63733407 None:intergenic 30.0%
CCCAAAAAAATTAAGTGTCT+TGG - Chr4:63730289-63730308 MsG0480021739.01.T01:intron 30.0%
GAAAATATCTCATATGACGT+GGG - Chr4:63731955-63731974 MsG0480021739.01.T01:intron 30.0%
GAATTGGAATGAAGAAAGAT+TGG + Chr4:63732354-63732373 None:intergenic 30.0%
GACTTGAGAATTGGATTATT+GGG - Chr4:63733240-63733259 MsG0480021739.01.T01:intron 30.0%
GATAAGCTTAGAACTCAATT+GGG - Chr4:63732952-63732971 MsG0480021739.01.T01:intron 30.0%
GGTTAAAATGACATTATGCA+TGG - Chr4:63729061-63729080 MsG0480021739.01.T01:intron 30.0%
GTAAATGTAAATTAGTGAGG+TGG + Chr4:63732052-63732071 None:intergenic 30.0%
GTAGACAAAAGAATGAACAA+AGG + Chr4:63732534-63732553 None:intergenic 30.0%
GTATATAATCAAGTGAGTGT+AGG - Chr4:63731632-63731651 MsG0480021739.01.T01:intron 30.0%
TACCTCTTGAAATTCAAAGA+AGG + Chr4:63732168-63732187 None:intergenic 30.0%
TATTATGACTACCAACTCTA+CGG + Chr4:63729111-63729130 None:intergenic 30.0%
TATTATGTCTACCACACATT+AGG + Chr4:63729830-63729849 None:intergenic 30.0%
TCAATGACACGAAAATGATT+TGG + Chr4:63731123-63731142 None:intergenic 30.0%
TGAAATAGTTGTTAACCCAA+TGG + Chr4:63729012-63729031 None:intergenic 30.0%
TGAAGAATCATGAATGGATA+TGG + Chr4:63732566-63732585 None:intergenic 30.0%
TGAATGTAAATTAGTGAGGT+GGG - Chr4:63731575-63731594 MsG0480021739.01.T01:intron 30.0%
TTCATCATTCCAAAAAACGA+TGG - Chr4:63732073-63732092 MsG0480021739.01.T01:intron 30.0%
TTTCTGGATTTATATTCCTG+AGG - Chr4:63733919-63733938 MsG0480021739.01.T01:intron 30.0%
! AGAATTAGCGAATTTTGGAT+GGG + Chr4:63732782-63732801 None:intergenic 30.0%
! CTAATTTTCGTACATGCTTT+TGG + Chr4:63730629-63730648 None:intergenic 30.0%
! CTTAGTGTGTGTGATTTTTA+CGG + Chr4:63730898-63730917 None:intergenic 30.0%
! GCAATCAATTCATACGTTTT+AGG + Chr4:63728492-63728511 None:intergenic 30.0%
! GCTAATGATTGAGATCTTTT+GGG + Chr4:63729986-63730005 None:intergenic 30.0%
! GGAATTTCAACCTAGATTTT+TGG + Chr4:63732317-63732336 None:intergenic 30.0%
! GGATTTTGAACCATTCTAAA+AGG - Chr4:63729495-63729514 MsG0480021739.01.T01:intron 30.0%
! GTAACAGAGACAAACTTTTA+AGG - Chr4:63731528-63731547 MsG0480021739.01.T01:intron 30.0%
! GTTTTATCTAGATACCAGAT+AGG - Chr4:63734009-63734028 MsG0480021739.01.T01:intron 30.0%
! TTAGCAGAATTAGCGAATTT+TGG + Chr4:63732787-63732806 None:intergenic 30.0%
! TTGTTACATGAGTGTGTTTT+TGG + Chr4:63728898-63728917 None:intergenic 30.0%
! TTTTGGATGATGTTAGTGTT+AGG + Chr4:63730124-63730143 None:intergenic 30.0%
! TTTTTATAATTTCGGATGGG+AGG - Chr4:63730834-63730853 MsG0480021739.01.T01:intron 30.0%
!! ACGTGTTTATTTTTCACCAT+TGG - Chr4:63728993-63729012 MsG0480021739.01.T01:intron 30.0%
!! ATGAAGTCATTTTCAAACTG+AGG - Chr4:63733540-63733559 MsG0480021739.01.T01:intron 30.0%
!! ATTTTAAGAGTGTGTTTGGA+TGG - Chr4:63729568-63729587 MsG0480021739.01.T01:intron 30.0%
!! CGTCATTTTGTTTAGTTAGT+AGG + Chr4:63729258-63729277 None:intergenic 30.0%
!! CGTGTTTATTTTTCACCATT+GGG - Chr4:63728994-63729013 MsG0480021739.01.T01:intron 30.0%
!! GCAGTTTTGTAACTATCTTA+AGG - Chr4:63731449-63731468 MsG0480021739.01.T01:intron 30.0%
!! GTGTATTTTAAGAGTGTGTT+TGG - Chr4:63729564-63729583 MsG0480021739.01.T01:intron 30.0%
!! TACTTTGAAATTGGGATTTG+TGG + Chr4:63732459-63732478 None:intergenic 30.0%
!! TTAAGCCTTTCTCTGAAATT+TGG - Chr4:63734063-63734082 MsG0480021739.01.T01:intron 30.0%
!!! AAAAGGTTTTTTCTTCCTAG+AGG + Chr4:63730811-63730830 None:intergenic 30.0%
!!! AAAGGATCAGTTTTGGATTT+TGG - Chr4:63733877-63733896 MsG0480021739.01.T01:intron 30.0%
!!! AAAGGGTCCATTTTTTTCTA+CGG + Chr4:63732723-63732742 None:intergenic 30.0%
!!! AAAGGTTTTTTCTTCCTAGA+GGG + Chr4:63730810-63730829 None:intergenic 30.0%
!!! CCCAAGACACTTAATTTTTT+TGG + Chr4:63730293-63730312 None:intergenic 30.0%
!!! CTTTTTCATGGTTTTGGAAA+GGG + Chr4:63732665-63732684 None:intergenic 30.0%
!!! GATCTTTTGGGATAAATGAT+AGG + Chr4:63729974-63729993 None:intergenic 30.0%
!!! TGAAAATAAGCGCTTTTTCA+TGG + Chr4:63732677-63732696 None:intergenic 30.0%
!!! TGAAAGGTATCCTTTTAGAA+TGG + Chr4:63729508-63729527 None:intergenic 30.0%
!!! TTTTTCTCTGTTTTTGGAGA+AGG - Chr4:63733145-63733164 MsG0480021739.01.T01:intron 30.0%
AACCTGAAAACCATTGTCTA+AGG - Chr4:63729765-63729784 MsG0480021739.01.T01:CDS 35.0%
AAGTTGTGGAAGGTTTATAG+AGG - Chr4:63733215-63733234 MsG0480021739.01.T01:intron 35.0%
ACAAAGAGAGAAGTGAAAAG+TGG + Chr4:63732600-63732619 None:intergenic 35.0%
ACACATTAGGCAAACATCAT+GGG + Chr4:63729817-63729836 None:intergenic 35.0%
ACTCATCAAATTCTCATCCA+GGG - Chr4:63733596-63733615 MsG0480021739.01.T01:intron 35.0%
AGAAGACAATGTCATGCTTA+AGG - Chr4:63731495-63731514 MsG0480021739.01.T01:intron 35.0%
AGAAGCCTGATTATGTTGAA+AGG - Chr4:63733291-63733310 MsG0480021739.01.T01:intron 35.0%
AGATTAAGCAGTTCTCGTTA+GGG - Chr4:63733318-63733337 MsG0480021739.01.T01:intron 35.0%
AGCTAATTCAAAACGCACAA+TGG + Chr4:63729172-63729191 None:intergenic 35.0%
AGTCATTGTGATATTGTGGT+TGG + Chr4:63730173-63730192 None:intergenic 35.0%
ATGATGAGAAGACAATGACA+TGG - Chr4:63733650-63733669 MsG0480021739.01.T01:intron 35.0%
ATTAATACCAACAGCTCCTT+GGG - Chr4:63734158-63734177 MsG0480021739.01.T01:intron 35.0%
ATTCCAAAAAACGATGGAGA+TGG - Chr4:63732079-63732098 MsG0480021739.01.T01:intron 35.0%
ATTCCAATTGTTGTACCTGT+TGG - Chr4:63734090-63734109 MsG0480021739.01.T01:intron 35.0%
ATTTATATTCCTGAGGTCTG+AGG - Chr4:63733926-63733945 MsG0480021739.01.T01:intron 35.0%
CAAAGAGAGAAGTGAAAAGT+GGG + Chr4:63732599-63732618 None:intergenic 35.0%
CACCTTCTTTGAATTTCAAG+AGG - Chr4:63732163-63732182 MsG0480021739.01.T01:intron 35.0%
CACTAAGGTGTAAATTAGCA+AGG + Chr4:63731695-63731714 None:intergenic 35.0%
CACTAAGTATCAAGAATTGC+GGG - Chr4:63730911-63730930 MsG0480021739.01.T01:intron 35.0%
CCAAAAAATGGATAGCACTT+GGG - Chr4:63730138-63730157 MsG0480021739.01.T01:intron 35.0%
CCACATCATCTTTGAGTAAA+TGG + Chr4:63732224-63732243 None:intergenic 35.0%
CCATTTACTCAAAGATGATG+TGG - Chr4:63732221-63732240 MsG0480021739.01.T01:intron 35.0%
CTGGTATCTAGATAAAACCA+AGG + Chr4:63734007-63734026 None:intergenic 35.0%
CTTTGAGTAAATGGGAAACA+CGG + Chr4:63732215-63732234 None:intergenic 35.0%
GAAGCCTGATTATGTTGAAA+GGG - Chr4:63733292-63733311 MsG0480021739.01.T01:intron 35.0%
GAATGAAGAAAGATTGGACA+CGG + Chr4:63732348-63732367 None:intergenic 35.0%
GACAGTTCAAACTTGATCTT+TGG + Chr4:63734216-63734235 None:intergenic 35.0%
GACTAGAATCATTTGACACA+TGG + Chr4:63728469-63728488 None:intergenic 35.0%
GCATCTATAAAGTTCCTTTC+TGG + Chr4:63728377-63728396 None:intergenic 35.0%
GCGCTAAAAACTCATAAAGT+GGG + Chr4:63729290-63729309 None:intergenic 35.0%
GGACTTGAGAATTGGATTAT+TGG - Chr4:63733239-63733258 MsG0480021739.01.T01:intron 35.0%
GGATAAGCTTAGAACTCAAT+TGG - Chr4:63732951-63732970 MsG0480021739.01.T01:intron 35.0%
GTGAATGTAAATTAGTGAGG+TGG - Chr4:63731574-63731593 MsG0480021739.01.T01:intron 35.0%
TACATTAACTAAAACAGCCC+TGG + Chr4:63733616-63733635 None:intergenic 35.0%
TACGGTGCATAAAAAAGACA+AGG + Chr4:63729093-63729112 None:intergenic 35.0%
TACGTACTTAAATCTCCACA+TGG - Chr4:63730545-63730564 MsG0480021739.01.T01:intron 35.0%
TACTCATCAAATTCTCATCC+AGG - Chr4:63733595-63733614 MsG0480021739.01.T01:intron 35.0%
TAGAATCATTTGACACATGG+AGG + Chr4:63728466-63728485 None:intergenic 35.0%
TATTACAGATCCATGTGTTC+CGG + Chr4:63728431-63728450 None:intergenic 35.0%
TCAACATTCCTAACAGACAA+AGG + Chr4:63733350-63733369 None:intergenic 35.0%
TCAACCCTTTCAACATAATC+AGG + Chr4:63733299-63733318 None:intergenic 35.0%
TCCAAAAAATGGATAGCACT+TGG - Chr4:63730137-63730156 MsG0480021739.01.T01:intron 35.0%
TGAAAGGATTTCAACCTGAT+AGG + Chr4:63730339-63730358 None:intergenic 35.0%
TGAACAAAGGGTCATTACAA+TGG + Chr4:63732521-63732540 None:intergenic 35.0%
TGAATGGATATGGATATGGA+TGG + Chr4:63732556-63732575 None:intergenic 35.0%
TTCGCTAATTCTGCTAAAAG+GGG - Chr4:63732790-63732809 MsG0480021739.01.T01:intron 35.0%
TTGACAATGTGACACTATCT+TGG - Chr4:63731083-63731102 MsG0480021739.01.T01:intron 35.0%
TTTGTACACTTGTGACATTG+TGG - Chr4:63730227-63730246 MsG0480021739.01.T01:intron 35.0%
! AAAAAAGTGGAGTACCAAGA+GGG + Chr4:63733681-63733700 None:intergenic 35.0%
! AAACTTTTACACACGGATAG+TGG - Chr4:63728633-63728652 MsG0480021739.01.T01:intron 35.0%
! AATGGGTGAATATGGTGTTA+GGG - Chr4:63733192-63733211 MsG0480021739.01.T01:intron 35.0%
! ATAAAGTTCCTTTCTGGCAA+AGG + Chr4:63728371-63728390 None:intergenic 35.0%
! CAGAATTAGCGAATTTTGGA+TGG + Chr4:63732783-63732802 None:intergenic 35.0%
! GAAGCATAATTGTTGTTGCA+GGG + Chr4:63732623-63732642 None:intergenic 35.0%
! GCTTGTTGAAGAATCATGAA+TGG + Chr4:63732572-63732591 None:intergenic 35.0%
! GGCTAATGATTGAGATCTTT+TGG + Chr4:63729987-63730006 None:intergenic 35.0%
! GTCATACAATGTGACTAGTT+TGG - Chr4:63731985-63732004 MsG0480021739.01.T01:intron 35.0%
! GTTCTAAGCTTATCCACAAT+TGG + Chr4:63732946-63732965 None:intergenic 35.0%
! TACCTTAGACAATGGTTTTC+AGG + Chr4:63729770-63729789 None:intergenic 35.0%
! TCTGTAGAAAGGATCAGTTT+TGG - Chr4:63733870-63733889 MsG0480021739.01.T01:intron 35.0%
! TGACTTGTCTGTGTAATGTT+GGG - Chr4:63728782-63728801 MsG0480021739.01.T01:intron 35.0%
! TTTGGGATAAATGATAGGGT+TGG + Chr4:63729969-63729988 None:intergenic 35.0%
!! GTCACTAACTAGGTTCTAAA+AGG - Chr4:63729474-63729493 MsG0480021739.01.T01:intron 35.0%
!! GTTCGAGATTTTGACATTGA+TGG - Chr4:63734114-63734133 MsG0480021739.01.T01:intron 35.0%
!! TATGGACTTTTAGAAGAAGG+AGG - Chr4:63733066-63733085 MsG0480021739.01.T01:intron 35.0%
!! TGACATTGATGGTGAACTTT+GGG - Chr4:63734125-63734144 MsG0480021739.01.T01:intron 35.0%
!! TTGACATTGATGGTGAACTT+TGG - Chr4:63734124-63734143 MsG0480021739.01.T01:intron 35.0%
!! TTGGATGGTGGATAATGAAA+TGG - Chr4:63729583-63729602 MsG0480021739.01.T01:intron 35.0%
!! TTTTCAAGAGGATCCAATTG+TGG - Chr4:63732930-63732949 MsG0480021739.01.T01:intron 35.0%
!!! AATGGTTTTCAGGTTGTACA+AGG + Chr4:63729760-63729779 None:intergenic 35.0%
!!! GCTTTTTCATGGTTTTGGAA+AGG + Chr4:63732666-63732685 None:intergenic 35.0%
!!! TAAGCGCTTTTTCATGGTTT+TGG + Chr4:63732671-63732690 None:intergenic 35.0%
!!! TTACCATCTCCATCGTTTTT+TGG + Chr4:63732085-63732104 None:intergenic 35.0%
!!! TTTTTTATGCACCGTAGAGT+TGG - Chr4:63729097-63729116 MsG0480021739.01.T01:intron 35.0%
AACAACGCAACCTCAATCTT+TGG - Chr4:63729690-63729709 MsG0480021739.01.T01:CDS 40.0%
ACACCAACAGGTACAACAAT+TGG + Chr4:63734096-63734115 None:intergenic 40.0%
ACACTCGCCTAAAAACACTA+AGG + Chr4:63731710-63731729 None:intergenic 40.0%
ACTTGAAAGCTTGGGAATGT+TGG + Chr4:63732417-63732436 None:intergenic 40.0%
AGGGATTCACAGGTTCAATT+GGG - Chr4:63732892-63732911 MsG0480021739.01.T01:intron 40.0%
ATGACATGGTATTTCCCTCT+TGG - Chr4:63733664-63733683 MsG0480021739.01.T01:intron 40.0%
ATTACAGATCCATGTGTTCC+GGG + Chr4:63728430-63728449 None:intergenic 40.0%
CAAAAGGCTAAGCATTTGTG+GGG - Chr4:63729137-63729156 MsG0480021739.01.T01:intron 40.0%
CAAACAAACCAGCAACGTTT+CGG + Chr4:63733011-63733030 None:intergenic 40.0%
CACACATTAGGCAAACATCA+TGG + Chr4:63729818-63729837 None:intergenic 40.0%
CATGATGTTTGCCTAATGTG+TGG - Chr4:63729816-63729835 MsG0480021739.01.T01:intron 40.0%
CATGTAGATCTCACAAGGAT+TGG - Chr4:63729526-63729545 MsG0480021739.01.T01:intron 40.0%
CATTATCAAGTGAACCGTGT+AGG - Chr4:63730659-63730678 MsG0480021739.01.T01:intron 40.0%
CCTTGTGAGATCTACATGAA+AGG + Chr4:63729524-63729543 None:intergenic 40.0%
CCTTTCATGTAGATCTCACA+AGG - Chr4:63729521-63729540 MsG0480021739.01.T01:intron 40.0%
CTGTTAGGAATGTTGAACGT+AGG - Chr4:63733354-63733373 MsG0480021739.01.T01:intron 40.0%
GAAAAACTAGTAGGCACTTG+CGG + Chr4:63733131-63733150 None:intergenic 40.0%
GAATGGGTGAATATGGTGTT+AGG - Chr4:63733191-63733210 MsG0480021739.01.T01:intron 40.0%
GAGATTAAGCAGTTCTCGTT+AGG - Chr4:63733317-63733336 MsG0480021739.01.T01:intron 40.0%
GAGGAACAAAGTTAGTAGTG+AGG - Chr4:63733085-63733104 MsG0480021739.01.T01:intron 40.0%
GATGAACTTGAAGTTGAAGG+CGG - Chr4:63732856-63732875 MsG0480021739.01.T01:intron 40.0%
GATTAAGCAGTTCTCGTTAG+GGG - Chr4:63733319-63733338 MsG0480021739.01.T01:intron 40.0%
GATTAATACCAACAGCTCCT+TGG - Chr4:63734157-63734176 MsG0480021739.01.T01:intron 40.0%
GCAAAAGGCTAAGCATTTGT+GGG - Chr4:63729136-63729155 MsG0480021739.01.T01:intron 40.0%
GGCGCTAAAAACTCATAAAG+TGG + Chr4:63729291-63729310 None:intergenic 40.0%
GGGAAAGGAAAGAAGAGAAT+TGG + Chr4:63732645-63732664 None:intergenic 40.0%
TAAACATGCACAGTTGAACC+CGG - Chr4:63728409-63728428 MsG0480021739.01.T01:CDS 40.0%
TACTCAAAGATGATGTGGAG+TGG - Chr4:63732226-63732245 MsG0480021739.01.T01:intron 40.0%
TCAAAATCTCGAACACCAAC+AGG + Chr4:63734108-63734127 None:intergenic 40.0%
TCTGAGTCAATACTGTATGC+CGG - Chr4:63728568-63728587 MsG0480021739.01.T01:CDS 40.0%
TTGTGGAAGGTTTATAGAGG+TGG - Chr4:63733218-63733237 MsG0480021739.01.T01:intron 40.0%
! ACAAGGATTGGTATGGAGAA+TGG - Chr4:63729538-63729557 MsG0480021739.01.T01:intron 40.0%
! AGATCTCACAAGGATTGGTA+TGG - Chr4:63729531-63729550 MsG0480021739.01.T01:intron 40.0%
! AGTAGTGAGGATAGTTTTCG+CGG - Chr4:63733098-63733117 MsG0480021739.01.T01:intron 40.0%
! ATAGAGGTGGACTTGAGAAT+TGG - Chr4:63733231-63733250 MsG0480021739.01.T01:intron 40.0%
! ATATGGTGTTAGGGAAGTTG+TGG - Chr4:63733201-63733220 MsG0480021739.01.T01:intron 40.0%
! CAAAAAAGTGGAGTACCAAG+AGG + Chr4:63733682-63733701 None:intergenic 40.0%
! CAATTTATAGTTGCACCGAC+AGG - Chr4:63729207-63729226 MsG0480021739.01.T01:intron 40.0%
! CTGAGGCTATTGTGTGTTTT+AGG - Chr4:63733943-63733962 MsG0480021739.01.T01:intron 40.0%
! GAAAACGGAAAAGCATGAAG+AGG - Chr4:63730596-63730615 MsG0480021739.01.T01:intron 40.0%
! GGAAGCATAATTGTTGTTGC+AGG + Chr4:63732624-63732643 None:intergenic 40.0%
! GTGACTTGTCTGTGTAATGT+TGG - Chr4:63728781-63728800 MsG0480021739.01.T01:intron 40.0%
! TTAAGAGTGTGTTTGGATGG+TGG - Chr4:63729571-63729590 MsG0480021739.01.T01:intron 40.0%
! TTTCAACCTGATAGGTTGAG+AGG + Chr4:63730331-63730350 None:intergenic 40.0%
! TTTTATGCCATGTAGCCTGT+CGG + Chr4:63729225-63729244 None:intergenic 40.0%
!! AAGATTGGACACGGTTTTAG+TGG + Chr4:63732339-63732358 None:intergenic 40.0%
!! AGATTGGACACGGTTTTAGT+GGG + Chr4:63732338-63732357 None:intergenic 40.0%
!! CACGGTTCACTTGATAATGA+TGG + Chr4:63730658-63730677 None:intergenic 40.0%
!! TTTTGGAGAAGGATTTGCAG+AGG - Chr4:63733156-63733175 MsG0480021739.01.T01:intron 40.0%
!!! CCCAAGTGCTATCCATTTTT+TGG + Chr4:63730141-63730160 None:intergenic 40.0%
!!! CTTGGTACTCCACTTTTTTG+TGG - Chr4:63733682-63733701 MsG0480021739.01.T01:intron 40.0%
!!! TCATGGTTTTGGAAAGGGAA+AGG + Chr4:63732660-63732679 None:intergenic 40.0%
!!! TGTTGTTATTTTGCGCACGT+GGG + Chr4:63730706-63730725 None:intergenic 40.0%
!!! TTGTTGTTATTTTGCGCACG+TGG + Chr4:63730707-63730726 None:intergenic 40.0%
AACACACACACACACAGTCT+TGG - Chr4:63730037-63730056 MsG0480021739.01.T01:intron 45.0%
AAGCTTGGGAATGTTGGAAG+TGG + Chr4:63732411-63732430 None:intergenic 45.0%
AAGTGGGAAGAGGAATGGAA+TGG + Chr4:63732394-63732413 None:intergenic 45.0%
ACAAAGAGACAAGACCGAGA+TGG + Chr4:63729658-63729677 None:intergenic 45.0%
ACCTAGTTAGTGACTCACAG+TGG + Chr4:63729468-63729487 None:intergenic 45.0%
ACGTGAATTGAGGGATTCAC+AGG - Chr4:63732882-63732901 MsG0480021739.01.T01:intron 45.0%
AGAGGAAAGAGTCGGTTGAA+TGG - Chr4:63733174-63733193 MsG0480021739.01.T01:intron 45.0%
AGCTTGGGAATGTTGGAAGT+GGG + Chr4:63732410-63732429 None:intergenic 45.0%
ATAGGCCTTAGGTATACTGG+AGG - Chr4:63734027-63734046 MsG0480021739.01.T01:intron 45.0%
ATGTTTGGATGGATGGACAC+AGG - Chr4:63728323-63728342 MsG0480021739.01.T01:CDS 45.0%
CAAACGATCCTTTGCCAGAA+AGG - Chr4:63728360-63728379 MsG0480021739.01.T01:CDS 45.0%
CAAGTGTAATCCGAAGAGAG+GGG + Chr4:63728817-63728836 None:intergenic 45.0%
CAGATAGGCCTTAGGTATAC+TGG - Chr4:63734024-63734043 MsG0480021739.01.T01:intron 45.0%
CAGTATACCTAAGGCCTATC+TGG + Chr4:63734026-63734045 None:intergenic 45.0%
CCAAGTGTAATCCGAAGAGA+GGG + Chr4:63728818-63728837 None:intergenic 45.0%
CCAGCAACGTTTCGGTTAAT+AGG + Chr4:63733003-63733022 None:intergenic 45.0%
CCTAGTTAGTGACTCACAGT+GGG + Chr4:63729467-63729486 None:intergenic 45.0%
CCTATTAACCGAAACGTTGC+TGG - Chr4:63733000-63733019 MsG0480021739.01.T01:intron 45.0%
CCTCTCTTCGGATTACACTT+GGG - Chr4:63728816-63728835 MsG0480021739.01.T01:intron 45.0%
CTAGATACCAGATAGGCCTT+AGG - Chr4:63734016-63734035 MsG0480021739.01.T01:intron 45.0%
GAGGAAAGAGTCGGTTGAAT+GGG - Chr4:63733175-63733194 MsG0480021739.01.T01:intron 45.0%
GAGGGATTCACAGGTTCAAT+TGG - Chr4:63732891-63732910 MsG0480021739.01.T01:intron 45.0%
GCAACGTTTCGGTTAATAGG+CGG + Chr4:63733000-63733019 None:intergenic 45.0%
GGATTTGCAGAGGAAAGAGT+CGG - Chr4:63733166-63733185 MsG0480021739.01.T01:intron 45.0%
GGCAAAAGGCTAAGCATTTG+TGG - Chr4:63729135-63729154 MsG0480021739.01.T01:intron 45.0%
GGGATGAACCTTTGTCTGTT+AGG - Chr4:63733339-63733358 MsG0480021739.01.T01:intron 45.0%
GTCAAAAGATCCCCTCTCTT+CGG - Chr4:63728804-63728823 MsG0480021739.01.T01:intron 45.0%
GTCGGTTGAATGGGTGAATA+TGG - Chr4:63733184-63733203 MsG0480021739.01.T01:intron 45.0%
GTGTCCATCCATCCAAACAT+GGG + Chr4:63728323-63728342 None:intergenic 45.0%
TATCCCCATGTTTGGATGGA+TGG - Chr4:63728316-63728335 MsG0480021739.01.T01:CDS 45.0%
TCAAAGATGATGTGGAGTGG+AGG - Chr4:63732229-63732248 MsG0480021739.01.T01:intron 45.0%
TGCATATCCCCATGTTTGGA+TGG - Chr4:63728312-63728331 MsG0480021739.01.T01:CDS 45.0%
TGCTGAAGCTCCAAAGATTG+AGG + Chr4:63729703-63729722 None:intergenic 45.0%
TGGGAAACACGGTCCAAAAT+TGG + Chr4:63732204-63732223 None:intergenic 45.0%
TGGGTCGGAAGTTAGAACAT+GGG + Chr4:63730687-63730706 None:intergenic 45.0%
TGTCCATCCATCCAAACATG+GGG + Chr4:63728322-63728341 None:intergenic 45.0%
TGTGTCCATCCATCCAAACA+TGG + Chr4:63728324-63728343 None:intergenic 45.0%
TTAATAGGCGGCGATGGAAT+CGG + Chr4:63732988-63733007 None:intergenic 45.0%
TTAGAACATGGGAGCCTACA+CGG + Chr4:63730676-63730695 None:intergenic 45.0%
! CTTTCTGGCAAAGGATCGTT+TGG + Chr4:63728362-63728381 None:intergenic 45.0%
! GAAGCACTCAGATCGTAAAG+AGG + Chr4:63734292-63734311 None:intergenic 45.0%
!! CATTTGGGTGTCATTGTGGT+TGG + Chr4:63730266-63730285 None:intergenic 45.0%
!! GTAGCATTTGGGTGTCATTG+TGG + Chr4:63730270-63730289 None:intergenic 45.0%
!! GTCATTGTGGTTGGTGACAT+TGG + Chr4:63730257-63730276 None:intergenic 45.0%
!!! TTTTTTGTGGCACGAGGCAA+GGG - Chr4:63733695-63733714 MsG0480021739.01.T01:intron 45.0%
!! ATAATTAAATTTAAATAGAA+TGG - Chr4:63731427-63731446 MsG0480021739.01.T01:intron 5.0%
!! ATTCTATAATATTTAAATTT+AGG + Chr4:63731746-63731765 None:intergenic 5.0%
!! TATAATTGTAAAAAAAAAAA+GGG + Chr4:63730066-63730085 None:intergenic 5.0%
!! TTATAATTGTAAAAAAAAAA+AGG + Chr4:63730067-63730086 None:intergenic 5.0%
!! TTCTATAATATTTAAATTTA+GGG + Chr4:63731745-63731764 None:intergenic 5.0%
!!! CTTTTTTATTTTTATAATTT+CGG - Chr4:63730826-63730845 MsG0480021739.01.T01:intron 5.0%
AAGGCGGTGAACGTGAATTG+AGG - Chr4:63732872-63732891 MsG0480021739.01.T01:intron 50.0%
ACACAATAGCCTCAGACCTC+AGG + Chr4:63733938-63733957 None:intergenic 50.0%
ACAGTTGAACCCGGAACACA+TGG - Chr4:63728418-63728437 MsG0480021739.01.T01:CDS 50.0%
AGGCGGTGAACGTGAATTGA+GGG - Chr4:63732873-63732892 MsG0480021739.01.T01:intron 50.0%
ATACCAACAGCTCCTTGGGT+CGG - Chr4:63734162-63734181 MsG0480021739.01.T01:intron 50.0%
CAAGGGAATAGACTCGCTGT+TGG - Chr4:63733712-63733731 MsG0480021739.01.T01:intron 50.0%
CCCAAGTGTAATCCGAAGAG+AGG + Chr4:63728819-63728838 None:intergenic 50.0%
CCCACTGTGAGTCACTAACT+AGG - Chr4:63729464-63729483 MsG0480021739.01.T01:intron 50.0%
CCCTCTCTTCGGATTACACT+TGG - Chr4:63728815-63728834 MsG0480021739.01.T01:intron 50.0%
GAGCACCTCCAGTATACCTA+AGG + Chr4:63734035-63734054 None:intergenic 50.0%
GATGGACACAGGTTTAGGCT+TGG - Chr4:63728334-63728353 MsG0480021739.01.T01:CDS 50.0%
GGAATGTTGGAAGTGGGAAG+AGG + Chr4:63732404-63732423 None:intergenic 50.0%
GGATGGATGGACACAGGTTT+AGG - Chr4:63728329-63728348 MsG0480021739.01.T01:CDS 50.0%
GGTGTTAGGGAAGTTGTGGA+AGG - Chr4:63733205-63733224 MsG0480021739.01.T01:intron 50.0%
GTGGGTCGGAAGTTAGAACA+TGG + Chr4:63730688-63730707 None:intergenic 50.0%
GTTGGAAGTGGGAAGAGGAA+TGG + Chr4:63732399-63732418 None:intergenic 50.0%
TAATAGGCGGCGATGGAATC+GGG + Chr4:63732987-63733006 None:intergenic 50.0%
TGCCTCGTGCCACAAAAAAG+TGG + Chr4:63733694-63733713 None:intergenic 50.0%
TGCGATCCTCTCAACCTATC+AGG - Chr4:63730322-63730341 MsG0480021739.01.T01:intron 50.0%
TTTCGGTTAATAGGCGGCGA+TGG + Chr4:63732994-63733013 None:intergenic 50.0%
! AGGATAGTTTTCGCGGTGTG+TGG - Chr4:63733105-63733124 MsG0480021739.01.T01:intron 50.0%
! GACTCGCTGTTGGTGTGTTT+TGG - Chr4:63733722-63733741 MsG0480021739.01.T01:intron 50.0%
!! GTTATTTTGCGCACGTGGGT+CGG + Chr4:63730702-63730721 None:intergenic 50.0%
!! TCGCTGTTGGTGTGTTTTGG+TGG - Chr4:63733725-63733744 MsG0480021739.01.T01:intron 50.0%
!!! CGCTGTTGGTGTGTTTTGGT+GGG - Chr4:63733726-63733745 MsG0480021739.01.T01:intron 50.0%
!!! CTCCACTTTTTTGTGGCACG+AGG - Chr4:63733689-63733708 MsG0480021739.01.T01:intron 50.0%
!!! CTTTTTTGTGGCACGAGGCA+AGG - Chr4:63733694-63733713 MsG0480021739.01.T01:intron 50.0%
TTGGGTCGGAGCTGCTTCAT+GGG - Chr4:63734176-63734195 MsG0480021739.01.T01:intron 55.0%
! AGTTGCACCGACAGGCTACA+TGG - Chr4:63729215-63729234 MsG0480021739.01.T01:intron 55.0%
CATGAAGCAGCTCCGACCCA+AGG + Chr4:63734177-63734196 None:intergenic 60.0%
CTTGGGTCGGAGCTGCTTCA+TGG - Chr4:63734175-63734194 MsG0480021739.01.T01:intron 60.0%
GCTCCGACCCAAGGAGCTGT+TGG + Chr4:63734168-63734187 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 63728311 63734350 63728311 ID=MsG0480021739.01;Name=MsG0480021739.01
Chr4 mRNA 63728311 63734350 63728311 ID=MsG0480021739.01.T01;Parent=MsG0480021739.01;Name=MsG0480021739.01.T01;_AED=0.50;_eAED=0.60;_QI=0|0.33|0|1|1|1|4|0|262
Chr4 exon 63734217 63734350 63734217 ID=MsG0480021739.01.T01:exon:3514;Parent=MsG0480021739.01.T01
Chr4 exon 63729688 63729821 63729688 ID=MsG0480021739.01.T01:exon:3515;Parent=MsG0480021739.01.T01
Chr4 exon 63729259 63729448 63729259 ID=MsG0480021739.01.T01:exon:3516;Parent=MsG0480021739.01.T01
Chr4 exon 63728311 63728641 63728311 ID=MsG0480021739.01.T01:exon:3517;Parent=MsG0480021739.01.T01
Chr4 CDS 63734217 63734350 63734217 ID=MsG0480021739.01.T01:cds;Parent=MsG0480021739.01.T01
Chr4 CDS 63729688 63729821 63729688 ID=MsG0480021739.01.T01:cds;Parent=MsG0480021739.01.T01
Chr4 CDS 63729259 63729448 63729259 ID=MsG0480021739.01.T01:cds;Parent=MsG0480021739.01.T01
Chr4 CDS 63728311 63728641 63728311 ID=MsG0480021739.01.T01:cds;Parent=MsG0480021739.01.T01
Gene Sequence

>MsG0480021739.01.T01

ATGCATATCCCCATGTTTGGATGGATGGACACAGGTTTAGGCTTGGTTCCAAACGATCCTTTGCCAGAAAGGAACTTTATAGATGCATTGGGTTCAACTAAACATGCACAGTTGAACCCGGAACACATGGATCTAATTTCAAATTCAAATGATGAACTTGAAGTTGAAGGCGGTGAACGTGAATTGAGGGATTCACAGGTTCAATTGGGTTCAAATTTTACTACTTTTCAAGAGGATCCAATTGTGGATAAGCTTAGAACTCAATTGGGGAAGTTGTGGAAGGTTTATAGAGGTGGACTTGAGAATTGGATTATTGGGTTGCTTCAACCTGTTATTGATGATTTGAAGAAGCCTGATTATGTTGAAAGGGTTGAGATTAAGCAGTTCTCGTTAGGGGATGAACCTTTGTCTGTTAGGAATGTTGAACGTAGGACTTCTCGCCGTGTCAATGATTTACAATACCAGATAGGCCTTAGGTATACTGGAGGTGCTCGCATGCTGTTAAGCCTTTCTCTGAAATTTGGTATTATTCCAATTGTTGTACCTGTTGGTGTTCGAGATTTTGACATTGATGGTGAACTTTGGGTAAAATTGAGATTAATACCAACAGCTCCTTGGGTCGGAGCTGCTTCATGGGCTTTTGTTTCACTTCCAAAGATCAAGTTTGAACTGTCTCCATTTCGTTTGTTCAACTTAATGGGTATGTCAAATGTTTTTAAATTTTATTCCTCTTTACGATCTGAGTGCTTCTGTAAGCAATTCAACTATGTTGCATTTAAATTTATCTAG
Protein sequence

>MsG0480021739.01.T01

MHIPMFGWMDTGLGLVPNDPLPERNFIDALGSTKHAQLNPEHMDLISNSNDELEVEGGERELRDSQVQLGSNFTTFQEDPIVDKLRTQLGKLWKVYRGGLENWIIGLLQPVIDDLKKPDYVERVEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLSLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTAPWVGAASWAFVSLPKIKFELSPFRLFNLMGMSNVFKFYSSLRSECFCKQFNYVAFKFI*