Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029507.01.T01 | XP_003617076.1 | 96.701 | 576 | 18 | 1 | 1 | 576 | 1 | 575 | 0 | 1144 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029507.01.T01 | Q94AD8 | 65.708 | 487 | 149 | 4 | 94 | 576 | 67 | 539 | 0 | 639 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029507.01.T01 | G7K2X0 | 96.701 | 576 | 18 | 1 | 1 | 576 | 1 | 575 | 0.0 | 1144 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000483.01 | MsG0580029507.01 | 0.823089 | 1.670910e-53 | 1.424693e-50 |
| MsG0180000854.01 | MsG0580029507.01 | 0.834594 | 2.738192e-56 | 3.264681e-53 |
| MsG0180002796.01 | MsG0580029507.01 | 0.813131 | 2.990026e-51 | 1.936220e-48 |
| MsG0180006103.01 | MsG0580029507.01 | 0.821411 | 4.095575e-53 | 3.329452e-50 |
| MsG0180006104.01 | MsG0580029507.01 | 0.853343 | 2.545156e-61 | 5.481809e-58 |
| MsG0380013471.01 | MsG0580029507.01 | 0.826177 | 3.129542e-54 | 2.913261e-51 |
| MsG0380014214.01 | MsG0580029507.01 | 0.829870 | 4.041872e-55 | 4.189768e-52 |
| MsG0480021737.01 | MsG0580029507.01 | 0.813251 | 2.813665e-51 | 1.828006e-48 |
| MsG0480021739.01 | MsG0580029507.01 | 0.824951 | 6.111181e-54 | 5.493741e-51 |
| MsG0580024650.01 | MsG0580029507.01 | -0.833946 | 3.982366e-56 | 4.657086e-53 |
| MsG0380015745.01 | MsG0580029507.01 | 0.846863 | 1.662850e-59 | 2.901471e-56 |
| MsG0380016963.01 | MsG0580029507.01 | 0.812301 | 4.542779e-51 | 2.877760e-48 |
| MsG0380017215.01 | MsG0580029507.01 | 0.841457 | 4.697197e-58 | 6.906413e-55 |
| MsG0380017229.01 | MsG0580029507.01 | 0.813987 | 1.937934e-51 | 1.284461e-48 |
| MsG0580029065.01 | MsG0580029507.01 | 0.836905 | 7.112850e-57 | 9.090554e-54 |
| MsG0580029507.01 | MsG0580029919.01 | 0.814007 | 1.917975e-51 | 1.271987e-48 |
| MsG0580029507.01 | MsG0680034235.01 | 0.804581 | 2.016432e-49 | 1.043523e-46 |
| MsG0580029507.01 | MsG0780041044.01 | 0.805230 | 1.475770e-49 | 7.765850e-47 |
| MsG0580029507.01 | MsG0780041482.01 | 0.808699 | 2.724669e-50 | 1.568451e-47 |
| MsG0580029507.01 | MsG0880047285.01 | -0.807244 | 5.556945e-50 | 3.079623e-47 |
| MsG0280007756.01 | MsG0580029507.01 | 0.801151 | 1.030682e-48 | 4.886874e-46 |
| MsG0280009117.01 | MsG0580029507.01 | 0.806984 | 6.306146e-50 | 3.471222e-47 |
| MsG0280009157.01 | MsG0580029507.01 | 0.844769 | 6.155921e-59 | 1.004275e-55 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029507.01.T01 | MTR_5g087680 | 96.701 | 576 | 18 | 1 | 1 | 576 | 1 | 575 | 0.0 | 1144 |
| MsG0580029507.01.T01 | MTR_8g028700 | 29.126 | 206 | 126 | 8 | 204 | 400 | 278 | 472 | 1.32e-13 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029507.01.T01 | AT5G21040 | 65.708 | 487 | 149 | 4 | 94 | 576 | 67 | 539 | 0.0 | 639 |
| MsG0580029507.01.T01 | AT5G21040 | 65.708 | 487 | 149 | 4 | 94 | 576 | 67 | 539 | 0.0 | 639 |
| MsG0580029507.01.T01 | AT5G21040 | 65.708 | 487 | 149 | 4 | 94 | 576 | 67 | 539 | 0.0 | 639 |
| MsG0580029507.01.T01 | AT4G25440 | 26.562 | 192 | 124 | 6 | 215 | 400 | 201 | 381 | 7.08e-11 | 65.1 |
| MsG0580029507.01.T01 | AT4G25440 | 26.562 | 192 | 124 | 6 | 215 | 400 | 201 | 381 | 7.08e-11 | 65.1 |
| MsG0580029507.01.T01 | AT4G25440 | 26.562 | 192 | 124 | 6 | 215 | 400 | 201 | 381 | 7.08e-11 | 65.1 |
Find 167 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGCCCCGGATTCGGATTC+TGG | 0.073012 | 5:+97867908 | MsG0580029507.01.T01:CDS |
| GGATACAAATAGTGGTAATT+TGG | 0.214324 | 5:+97868522 | MsG0580029507.01.T01:CDS |
| AGAATTCAGTGACTTGTATT+TGG | 0.227143 | 5:+97869127 | MsG0580029507.01.T01:CDS |
| TATTAAGGTTTCTCAAAATT+TGG | 0.231567 | 5:+97867481 | MsG0580029507.01.T01:CDS |
| GAGGCATAGTGACTGGGTTT+GGG | 0.240433 | 5:+97868441 | MsG0580029507.01.T01:CDS |
| TGCATCAAGTGACGGTAAAT+TGG | 0.255164 | 5:+97868759 | MsG0580029507.01.T01:CDS |
| GAATATCGAGCTTCGACTTT+GGG | 0.260179 | 5:+97868303 | MsG0580029507.01.T01:CDS |
| TTGGTACTTGTAACAAAATC+AGG | 0.267441 | 5:-97867581 | None:intergenic |
| ATTGCTTTGGAATTAGCTTT+TGG | 0.270487 | 5:-97867545 | None:intergenic |
| AAGAAGGTGTTGTCAGGATT+TGG | 0.289321 | 5:+97868959 | MsG0580029507.01.T01:CDS |
| ACAAGTCACTGAATTCTTCT+TGG | 0.290695 | 5:-97869121 | None:intergenic |
| CGGATTCGGATTCTGGGGTT+GGG | 0.292544 | 5:+97867915 | MsG0580029507.01.T01:CDS |
| GTTCCTGGTGATGTTGTTAT+TGG | 0.296435 | 5:+97867704 | MsG0580029507.01.T01:CDS |
| GGGACACGACTGTTCGTGTT+TGG | 0.301737 | 5:+97868386 | MsG0580029507.01.T01:CDS |
| GGATTCTGGGGTTGGGGACT+CGG | 0.310703 | 5:+97867922 | MsG0580029507.01.T01:CDS |
| CAGGTTCAAATGTCTATGTT+TGG | 0.315156 | 5:+97868500 | MsG0580029507.01.T01:CDS |
| CCCTTGCATTTGAGTTTCCT+TGG | 0.322502 | 5:+97868728 | MsG0580029507.01.T01:CDS |
| CCGGATTCGGATTCTGGGGT+TGG | 0.326385 | 5:+97867914 | MsG0580029507.01.T01:CDS |
| TTGGAATTTCACTGAAGCTT+TGG | 0.329752 | 5:+97868978 | MsG0580029507.01.T01:CDS |
| GGACACGACTGTTCGTGTTT+GGG | 0.333812 | 5:+97868387 | MsG0580029507.01.T01:CDS |
| GCTCTGGCAAGAAGCCATAC+TGG | 0.333876 | 5:+97868583 | MsG0580029507.01.T01:CDS |
| TCCTGAGGCTGCCCCGGATT+CGG | 0.334382 | 5:+97867901 | MsG0580029507.01.T01:CDS |
| TGAGGCATAGTGACTGGGTT+TGG | 0.336839 | 5:+97868440 | MsG0580029507.01.T01:CDS |
| CTGCCCCGGATTCGGATTCT+GGG | 0.341023 | 5:+97867909 | MsG0580029507.01.T01:CDS |
| TGATTGTCCACAGAGTATTA+AGG | 0.341124 | 5:+97867466 | MsG0580029507.01.T01:CDS |
| GAATGAAATTGAAATTGCTT+TGG | 0.351107 | 5:-97867558 | None:intergenic |
| TGTTGTGAGGATGTGGAATA+TGG | 0.364572 | 5:+97868111 | MsG0580029507.01.T01:CDS |
| ACCTTTACCAGATTCAGATT+TGG | 0.373484 | 5:-97867600 | None:intergenic |
| ACTACAGTTGTCAGCGCATC+AGG | 0.376108 | 5:+97868481 | MsG0580029507.01.T01:CDS |
| CGCAGGAGCAAGCGTGCCAT+TGG | 0.376152 | 5:+97868808 | MsG0580029507.01.T01:CDS |
| TGGGGTTGGGGACTCGGTTA+AGG | 0.378490 | 5:+97867928 | MsG0580029507.01.T01:CDS |
| AGGTTCAAATGTCTATGTTT+GGG | 0.381358 | 5:+97868501 | MsG0580029507.01.T01:CDS |
| CCAACCCCAGAATCCGAATC+CGG | 0.386432 | 5:-97867914 | None:intergenic |
| CTTTACTGTTGAGCTCTGTT+TGG | 0.387781 | 5:-97869068 | None:intergenic |
| CCGTCCGAACCGCCTCAGTA+TGG | 0.395631 | 5:-97868039 | None:intergenic |
| GTGCGGTTGCAGCTGATTCA+AGG | 0.396142 | 5:+97868182 | MsG0580029507.01.T01:CDS |
| CAAGGATTTATAGCGGCTCT+TGG | 0.398374 | 5:+97868365 | MsG0580029507.01.T01:CDS |
| CTAGTTGCTGGTGGTACTGA+TGG | 0.399926 | 5:+97868208 | MsG0580029507.01.T01:CDS |
| CATTGTTGGAGGGCTGTTGA+AGG | 0.402189 | 5:+97868238 | MsG0580029507.01.T01:CDS |
| AGCTACGAAGGCAAAGCATT+CGG | 0.402371 | 5:+97868837 | MsG0580029507.01.T01:CDS |
| GCAAGGCTTATATTTACCTC+TGG | 0.403081 | 5:+97868079 | MsG0580029507.01.T01:CDS |
| ATGGGTTCATTCATTGTTGG+AGG | 0.408370 | 5:+97868227 | MsG0580029507.01.T01:CDS |
| TGTCTTGATCCCAAGGAACT+TGG | 0.412604 | 5:+97867782 | MsG0580029507.01.T01:CDS |
| TGAAACAATTCCAAGTTCCT+TGG | 0.415363 | 5:-97867792 | None:intergenic |
| TTGAATCAATCATCAGTTCC+TGG | 0.416725 | 5:+97867689 | MsG0580029507.01.T01:CDS |
| CTCTGGCAAGAAGCCATACT+GGG | 0.419605 | 5:+97868584 | MsG0580029507.01.T01:CDS |
| AGAATATCGAGCTTCGACTT+TGG | 0.422071 | 5:+97868302 | MsG0580029507.01.T01:CDS |
| GCTACGAAGGCAAAGCATTC+GGG | 0.423365 | 5:+97868838 | MsG0580029507.01.T01:CDS |
| ACAAGTACCAAATCTGAATC+TGG | 0.429740 | 5:+97867593 | MsG0580029507.01.T01:CDS |
| GGAATCAAAGCAGCCTCTGC+TGG | 0.429965 | 5:+97867662 | MsG0580029507.01.T01:CDS |
| CCACCCATCCCACGTTTACT+CGG | 0.433322 | 5:-97869150 | None:intergenic |
| GTCAATTACCGACCTGCCTC+CGG | 0.440094 | 5:+97867736 | MsG0580029507.01.T01:CDS |
| GGATTCGGATTCTGGGGTTG+GGG | 0.446567 | 5:+97867916 | MsG0580029507.01.T01:CDS |
| GATTCAAGGCTGCTAGTTGC+TGG | 0.449158 | 5:+97868196 | MsG0580029507.01.T01:CDS |
| CAACCCCAGAATCCGAATCC+GGG | 0.453007 | 5:-97867913 | None:intergenic |
| GAAACAATTCCAAGTTCCTT+GGG | 0.456413 | 5:-97867791 | None:intergenic |
| CTGATGGGTTCATTCATTGT+TGG | 0.458594 | 5:+97868224 | MsG0580029507.01.T01:CDS |
| TCCGAATCCGGGGCAGCCTC+AGG | 0.463004 | 5:-97867902 | None:intergenic |
| ACGTGAGGAAGCTGCTGCGC+AGG | 0.470977 | 5:+97868791 | MsG0580029507.01.T01:CDS |
| GGGGCAGCCTCAGGAACTAC+TGG | 0.471053 | 5:-97867893 | None:intergenic |
| CTTCGACTTTGGGGTCATGA+TGG | 0.472776 | 5:+97868313 | MsG0580029507.01.T01:CDS |
| CAAAATTTGGTAGAAAATCC+AGG | 0.476329 | 5:+97867494 | MsG0580029507.01.T01:CDS |
| AAGCTCTGCATGTTGCTACA+TGG | 0.480913 | 5:+97868680 | MsG0580029507.01.T01:CDS |
| GAGGTGAAGAAGGTGTTGTC+AGG | 0.482885 | 5:+97868953 | MsG0580029507.01.T01:CDS |
| CGCACGAATGGTGCAGCCAA+GGG | 0.484982 | 5:-97868164 | None:intergenic |
| TCTAAAGCAAGTGAAGTAAC+CGG | 0.486649 | 5:-97868337 | None:intergenic |
| TGGTGTTGAGGCATAGTGAC+TGG | 0.489275 | 5:+97868434 | MsG0580029507.01.T01:CDS |
| AAGGATTTATAGCGGCTCTT+GGG | 0.490823 | 5:+97868366 | MsG0580029507.01.T01:CDS |
| CCGCACGAATGGTGCAGCCA+AGG | 0.491460 | 5:-97868165 | None:intergenic |
| ACTTTGGGGTCATGATGGTC+CGG | 0.492214 | 5:+97868318 | MsG0580029507.01.T01:CDS |
| CGACTGTTCGTGTTTGGGAC+CGG | 0.495442 | 5:+97868392 | MsG0580029507.01.T01:CDS |
| TTGCTTCTGAGCATCATGCT+TGG | 0.497663 | 5:+97867840 | MsG0580029507.01.T01:CDS |
| AGGCATAGTGACTGGGTTTG+GGG | 0.499135 | 5:+97868442 | MsG0580029507.01.T01:CDS |
| CAAGGCTTATATTTACCTCT+GGG | 0.505424 | 5:+97868080 | MsG0580029507.01.T01:CDS |
| CTTCGTAGCTCTCTTTCCAA+TGG | 0.506421 | 5:-97868824 | None:intergenic |
| ATTGTTTGCGGAGGTGAAGA+AGG | 0.507560 | 5:+97868943 | MsG0580029507.01.T01:CDS |
| ATGACACTGTTGTGAGGATG+TGG | 0.509810 | 5:+97868104 | MsG0580029507.01.T01:CDS |
| TATAGTATGGATGTGTTGTA+TGG | 0.512904 | 5:+97868016 | MsG0580029507.01.T01:CDS |
| GCTACATGGGATCCCCACTC+TGG | 0.513036 | 5:+97868694 | MsG0580029507.01.T01:CDS |
| AGCTTCTAAGCTCAAACAGA+TGG | 0.518663 | 5:-97868267 | None:intergenic |
| TCCTTTCTTAGAATTCAGCT+TGG | 0.519214 | 5:-97867642 | None:intergenic |
| CAGATATCAACACCGGAGGC+AGG | 0.519928 | 5:-97867748 | None:intergenic |
| TTCTGAGCATCATGCTTGGA+AGG | 0.520426 | 5:+97867844 | MsG0580029507.01.T01:CDS |
| AGTAGTTCCTGAGGCTGCCC+CGG | 0.521058 | 5:+97867895 | MsG0580029507.01.T01:CDS |
| ATGTTGTTATTGGTAATTGT+CGG | 0.526932 | 5:+97867714 | MsG0580029507.01.T01:CDS |
| TCCAAGCTGAATTCTAAGAA+AGG | 0.528874 | 5:+97867641 | MsG0580029507.01.T01:CDS |
| GGAGCTGATCGAATTGTTTG+CGG | 0.530268 | 5:+97868931 | MsG0580029507.01.T01:CDS |
| TGTAGCAACATGCAGAGCTT+CGG | 0.530838 | 5:-97868677 | None:intergenic |
| TGTTGGTAATACTTATGCTC+TGG | 0.532688 | 5:+97868567 | MsG0580029507.01.T01:CDS |
| ATGGCCATACTGAGGCGGTT+CGG | 0.534662 | 5:+97868035 | MsG0580029507.01.T01:CDS |
| GGAAGGAATTCTATTGTGAA+AGG | 0.534799 | 5:+97867861 | MsG0580029507.01.T01:CDS |
| AGCTCTGCATGTTGCTACAT+GGG | 0.538463 | 5:+97868681 | MsG0580029507.01.T01:CDS |
| AATTCTATTGTGAAAGGTGG+GGG | 0.539393 | 5:+97867867 | MsG0580029507.01.T01:CDS |
| CACTTGCTTTAGATTTGACA+AGG | 0.543356 | 5:+97868347 | MsG0580029507.01.T01:CDS |
| TCTGAATTGTCTTGATCCCA+AGG | 0.544208 | 5:+97867775 | MsG0580029507.01.T01:CDS |
| GCCAAGGAAACTCAAATGCA+AGG | 0.544757 | 5:-97868729 | None:intergenic |
| CAAACAGAGCTCAACAGTAA+AGG | 0.545423 | 5:+97869069 | MsG0580029507.01.T01:CDS |
| GGAATTCTATTGTGAAAGGT+GGG | 0.546745 | 5:+97867865 | MsG0580029507.01.T01:CDS |
| TAGTTGCTGGTGGTACTGAT+GGG | 0.547645 | 5:+97868209 | MsG0580029507.01.T01:CDS |
| GGAATACACAGGACCAGAGT+GGG | 0.547884 | 5:-97868707 | None:intergenic |
| AGGAATTCTATTGTGAAAGG+TGG | 0.550977 | 5:+97867864 | MsG0580029507.01.T01:CDS |
| ACCAAATCTGAATCTGGTAA+AGG | 0.551211 | 5:+97867599 | MsG0580029507.01.T01:CDS |
| ATCAGCTGCAACCGCACGAA+TGG | 0.551500 | 5:-97868176 | None:intergenic |
| GAATATGGAAAGTGGGTTGT+CGG | 0.551869 | 5:+97868126 | MsG0580029507.01.T01:CDS |
| GCTTCTAAGCTCAAACAGAT+GGG | 0.552704 | 5:-97868266 | None:intergenic |
| CTTGTTTCTGCATCAAGTGA+CGG | 0.559096 | 5:+97868751 | MsG0580029507.01.T01:CDS |
| TGGGTTCATTCATTGTTGGA+GGG | 0.566261 | 5:+97868228 | MsG0580029507.01.T01:CDS |
| CAGTGCATTTCATTGAGTGC+CGG | 0.567444 | 5:-97868411 | None:intergenic |
| GTTGCATCGTCTAAACCCCT+TGG | 0.569523 | 5:+97868148 | MsG0580029507.01.T01:CDS |
| TGTATTTGGCCGAGTAAACG+TGG | 0.570665 | 5:+97869141 | MsG0580029507.01.T01:CDS |
| CCGAGTAAACGTGGGATGGG+TGG | 0.570855 | 5:+97869150 | MsG0580029507.01.T01:CDS |
| TTGGCCGAGTAAACGTGGGA+TGG | 0.570891 | 5:+97869146 | MsG0580029507.01.T01:CDS |
| TGGCCGAGTAAACGTGGGAT+GGG | 0.571770 | 5:+97869147 | MsG0580029507.01.T01:CDS |
| CCATACTGAGGCGGTTCGGA+CGG | 0.572653 | 5:+97868039 | MsG0580029507.01.T01:CDS |
| ACTATGTCTATGCTTATACC+TGG | 0.575225 | 5:-97867512 | None:intergenic |
| AGCAGAGTCCGTGCGTTGAG+AGG | 0.577850 | 5:+97869009 | MsG0580029507.01.T01:CDS |
| GGGAATACACAGGACCAGAG+TGG | 0.578483 | 5:-97868708 | None:intergenic |
| GGTGTTGAGGCATAGTGACT+GGG | 0.580557 | 5:+97868435 | MsG0580029507.01.T01:CDS |
| AATATCGAGCTTCGACTTTG+GGG | 0.580619 | 5:+97868304 | MsG0580029507.01.T01:CDS |
| CGGTTAAGGATGAAAAGTCA+TGG | 0.582830 | 5:+97867942 | MsG0580029507.01.T01:CDS |
| AGGATGTGGAATATGGAAAG+TGG | 0.585239 | 5:+97868118 | MsG0580029507.01.T01:CDS |
| TGGTACTTGTAACAAAATCA+GGG | 0.585500 | 5:-97867580 | None:intergenic |
| TATGTTTGGGATACAAATAG+TGG | 0.587240 | 5:+97868514 | MsG0580029507.01.T01:CDS |
| GTTGTTCTAAATGCTCATGT+TGG | 0.587779 | 5:+97868550 | MsG0580029507.01.T01:CDS |
| TGCCCCGGATTCGGATTCTG+GGG | 0.588984 | 5:+97867910 | MsG0580029507.01.T01:CDS |
| GAATTCTATTGTGAAAGGTG+GGG | 0.592760 | 5:+97867866 | MsG0580029507.01.T01:CDS |
| CCTTGGCTGCACCATTCGTG+CGG | 0.596147 | 5:+97868165 | MsG0580029507.01.T01:CDS |
| AAGCATGATGCTCAGAAGCA+AGG | 0.599509 | 5:-97867838 | None:intergenic |
| GGGGCTTCCAGTAGTTCCTG+AGG | 0.600697 | 5:+97867886 | MsG0580029507.01.T01:CDS |
| TAAGGATGAAAAGTCATGGA+AGG | 0.603872 | 5:+97867946 | MsG0580029507.01.T01:CDS |
| AACCCCAGAATCCGAATCCG+GGG | 0.606591 | 5:-97867912 | None:intergenic |
| CCAAGGAAACTCAAATGCAA+GGG | 0.607952 | 5:-97868728 | None:intergenic |
| ATCGCATTCCTCTCAACGCA+CGG | 0.609976 | 5:-97869017 | None:intergenic |
| GGATGTGGAATATGGAAAGT+GGG | 0.616420 | 5:+97868119 | MsG0580029507.01.T01:CDS |
| GCACGAATGGTGCAGCCAAG+GGG | 0.620270 | 5:-97868163 | None:intergenic |
| TGAGAAACCTTAATACTCTG+TGG | 0.625318 | 5:-97867473 | None:intergenic |
| CCTCCACAGAGGATGTTGCA+TGG | 0.629985 | 5:+97868877 | MsG0580029507.01.T01:CDS |
| TGAAATGCACTGTGGTGTTG+AGG | 0.634082 | 5:+97868422 | MsG0580029507.01.T01:CDS |
| TCAAGGCTGCTAGTTGCTGG+TGG | 0.634425 | 5:+97868199 | MsG0580029507.01.T01:CDS |
| GCTGATCGAATTGTTTGCGG+AGG | 0.634908 | 5:+97868934 | MsG0580029507.01.T01:CDS |
| CATTGGAAAGAGAGCTACGA+AGG | 0.636262 | 5:+97868825 | MsG0580029507.01.T01:CDS |
| CCATGCAACATCCTCTGTGG+AGG | 0.637533 | 5:-97868877 | None:intergenic |
| TTACCAATAACAACATCACC+AGG | 0.641015 | 5:-97867707 | None:intergenic |
| TTGATTCAAAGCACCAGCAG+AGG | 0.642131 | 5:-97867675 | None:intergenic |
| GATTTGACAAGGATTTATAG+CGG | 0.646594 | 5:+97868358 | MsG0580029507.01.T01:CDS |
| CTGACAACTGTAGTATCATG+AGG | 0.646853 | 5:-97868472 | None:intergenic |
| GAGTGATCAATGTTCAGCTG+TGG | 0.650212 | 5:+97869098 | MsG0580029507.01.T01:CDS |
| TATCAACACCGGAGGCAGGT+CGG | 0.660522 | 5:-97867744 | None:intergenic |
| AGAATCTCAGATATCAACAC+CGG | 0.662398 | 5:-97867755 | None:intergenic |
| ATCTCAGATATCAACACCGG+AGG | 0.667344 | 5:-97867752 | None:intergenic |
| CTTCTAAGCTCAAACAGATG+GGG | 0.668505 | 5:-97868265 | None:intergenic |
| TGGGATGGGTGGAAAGACAA+AGG | 0.668881 | 5:+97869161 | MsG0580029507.01.T01:CDS |
| CTTGATGCAGAAACAAGCCA+AGG | 0.672008 | 5:-97868745 | None:intergenic |
| AATTGGCACTAATTGACGTG+AGG | 0.673669 | 5:+97868776 | MsG0580029507.01.T01:CDS |
| ACAGAGCTCAACAGTAAAGG+CGG | 0.674924 | 5:+97869072 | MsG0580029507.01.T01:CDS |
| CTGGGTATGACACTGTTGTG+AGG | 0.676745 | 5:+97868098 | MsG0580029507.01.T01:CDS |
| AATCCATGCAACATCCTCTG+TGG | 0.681299 | 5:-97868880 | None:intergenic |
| TGACAACTGTAGTATCATGA+GGG | 0.683573 | 5:-97868471 | None:intergenic |
| GAATACACAGGACCAGAGTG+GGG | 0.704942 | 5:-97868706 | None:intergenic |
| TCAAATGCAAGGGAATACAC+AGG | 0.706149 | 5:-97868718 | None:intergenic |
| GTATTTGGCCGAGTAAACGT+GGG | 0.710601 | 5:+97869142 | MsG0580029507.01.T01:CDS |
| TCTGGCAAGAAGCCATACTG+GGG | 0.724126 | 5:+97868585 | MsG0580029507.01.T01:CDS |
| TGTGTTGTATGGCCATACTG+AGG | 0.726995 | 5:+97868027 | MsG0580029507.01.T01:CDS |
| GTTGTATGGCCATACTGAGG+CGG | 0.731111 | 5:+97868030 | MsG0580029507.01.T01:CDS |
| CACAACAGTGTCATACCCAG+AGG | 0.751522 | 5:-97868095 | None:intergenic |
| TTAACGTAGAACCTCCACAG+AGG | 0.808973 | 5:+97868866 | MsG0580029507.01.T01:CDS |
| GCACTCAATGAAATGCACTG+TGG | 0.839984 | 5:+97868414 | MsG0580029507.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTAAGGTTTCTCAAAATT+TGG | + | Chr5:97867481-97867500 | MsG0580029507.01.T01:CDS | 20.0% |
| ! | GAATGAAATTGAAATTGCTT+TGG | - | Chr5:97867561-97867580 | None:intergenic | 25.0% |
| !! | AAGAATAATCTTTTCTCTGT+AGG | + | Chr5:97868904-97868923 | MsG0580029507.01.T01:CDS | 25.0% |
| !! | ATGTTGTTATTGGTAATTGT+CGG | + | Chr5:97867714-97867733 | MsG0580029507.01.T01:CDS | 25.0% |
| !! | TATAGGAGTAAGACTTTTAT+GGG | + | Chr5:97867989-97868008 | MsG0580029507.01.T01:CDS | 25.0% |
| !! | TTATAGGAGTAAGACTTTTA+TGG | + | Chr5:97867988-97868007 | MsG0580029507.01.T01:CDS | 25.0% |
| AGGTTCAAATGTCTATGTTT+GGG | + | Chr5:97868501-97868520 | MsG0580029507.01.T01:CDS | 30.0% | |
| CAAAATTTGGTAGAAAATCC+AGG | + | Chr5:97867494-97867513 | MsG0580029507.01.T01:CDS | 30.0% | |
| GATTTGACAAGGATTTATAG+CGG | + | Chr5:97868358-97868377 | MsG0580029507.01.T01:CDS | 30.0% | |
| GGATACAAATAGTGGTAATT+TGG | + | Chr5:97868522-97868541 | MsG0580029507.01.T01:CDS | 30.0% | |
| TAAAAATGAAATCCCCAGTA+TGG | - | Chr5:97868600-97868619 | None:intergenic | 30.0% | |
| TATAGTATGGATGTGTTGTA+TGG | + | Chr5:97868016-97868035 | MsG0580029507.01.T01:CDS | 30.0% | |
| TGGTACTTGTAACAAAATCA+GGG | - | Chr5:97867583-97867602 | None:intergenic | 30.0% | |
| TTGGTACTTGTAACAAAATC+AGG | - | Chr5:97867584-97867603 | None:intergenic | 30.0% | |
| ! | AATCTTTTCTCTGTAGGTAT+AGG | + | Chr5:97868910-97868929 | MsG0580029507.01.T01:CDS | 30.0% |
| ! | AGAATTCAGTGACTTGTATT+TGG | + | Chr5:97869127-97869146 | MsG0580029507.01.T01:CDS | 30.0% |
| ! | GGTAAAGGTGAGATTTTTAA+GGG | + | Chr5:97867614-97867633 | MsG0580029507.01.T01:CDS | 30.0% |
| ! | TATGTTTGGGATACAAATAG+TGG | + | Chr5:97868514-97868533 | MsG0580029507.01.T01:CDS | 30.0% |
| ! | TGGTAAAGGTGAGATTTTTA+AGG | + | Chr5:97867613-97867632 | MsG0580029507.01.T01:CDS | 30.0% |
| ! | TTTTATGGGTAGGTATAGTA+TGG | + | Chr5:97868003-97868022 | MsG0580029507.01.T01:CDS | 30.0% |
| ! | TTTTTGTGGAAAGGGATTAT+AGG | + | Chr5:97867972-97867991 | MsG0580029507.01.T01:CDS | 30.0% |
| !! | GAAGGATATTTTTGTGGAAA+GGG | + | Chr5:97867964-97867983 | MsG0580029507.01.T01:CDS | 30.0% |
| !! | GTAAAGGTGAGATTTTTAAG+GGG | + | Chr5:97867615-97867634 | MsG0580029507.01.T01:CDS | 30.0% |
| !!! | ATTGCTTTGGAATTAGCTTT+TGG | - | Chr5:97867548-97867567 | None:intergenic | 30.0% |
| AATTCTATTGTGAAAGGTGG+GGG | + | Chr5:97867867-97867886 | MsG0580029507.01.T01:CDS | 35.0% | |
| ACAAGTACCAAATCTGAATC+TGG | + | Chr5:97867593-97867612 | MsG0580029507.01.T01:CDS | 35.0% | |
| ACAAGTCACTGAATTCTTCT+TGG | - | Chr5:97869124-97869143 | None:intergenic | 35.0% | |
| ACCAAATCTGAATCTGGTAA+AGG | + | Chr5:97867599-97867618 | MsG0580029507.01.T01:CDS | 35.0% | |
| ACCTTTACCAGATTCAGATT+TGG | - | Chr5:97867603-97867622 | None:intergenic | 35.0% | |
| ACTATGTCTATGCTTATACC+TGG | - | Chr5:97867515-97867534 | None:intergenic | 35.0% | |
| AGAATCTCAGATATCAACAC+CGG | - | Chr5:97867758-97867777 | None:intergenic | 35.0% | |
| AGGAATTCTATTGTGAAAGG+TGG | + | Chr5:97867864-97867883 | MsG0580029507.01.T01:CDS | 35.0% | |
| CAAGGCTTATATTTACCTCT+GGG | + | Chr5:97868080-97868099 | MsG0580029507.01.T01:CDS | 35.0% | |
| CAGGTTCAAATGTCTATGTT+TGG | + | Chr5:97868500-97868519 | MsG0580029507.01.T01:CDS | 35.0% | |
| GAAACAATTCCAAGTTCCTT+GGG | - | Chr5:97867794-97867813 | None:intergenic | 35.0% | |
| GAATTCTATTGTGAAAGGTG+GGG | + | Chr5:97867866-97867885 | MsG0580029507.01.T01:CDS | 35.0% | |
| GGAAGGAATTCTATTGTGAA+AGG | + | Chr5:97867861-97867880 | MsG0580029507.01.T01:CDS | 35.0% | |
| GGAATTCTATTGTGAAAGGT+GGG | + | Chr5:97867865-97867884 | MsG0580029507.01.T01:CDS | 35.0% | |
| TAAGGATGAAAAGTCATGGA+AGG | + | Chr5:97867946-97867965 | MsG0580029507.01.T01:CDS | 35.0% | |
| TCCTTTCTTAGAATTCAGCT+TGG | - | Chr5:97867645-97867664 | None:intergenic | 35.0% | |
| TGAAACAATTCCAAGTTCCT+TGG | - | Chr5:97867795-97867814 | None:intergenic | 35.0% | |
| TGACAACTGTAGTATCATGA+GGG | - | Chr5:97868474-97868493 | None:intergenic | 35.0% | |
| TGAGAAACCTTAATACTCTG+TGG | - | Chr5:97867476-97867495 | None:intergenic | 35.0% | |
| TTACCAATAACAACATCACC+AGG | - | Chr5:97867710-97867729 | None:intergenic | 35.0% | |
| TTGAATCAATCATCAGTTCC+TGG | + | Chr5:97867689-97867708 | MsG0580029507.01.T01:CDS | 35.0% | |
| TTGGAATTTCACTGAAGCTT+TGG | + | Chr5:97868978-97868997 | MsG0580029507.01.T01:CDS | 35.0% | |
| ! | CACTTGCTTTAGATTTGACA+AGG | + | Chr5:97868347-97868366 | MsG0580029507.01.T01:CDS | 35.0% |
| ! | GTTGTTCTAAATGCTCATGT+TGG | + | Chr5:97868550-97868569 | MsG0580029507.01.T01:CDS | 35.0% |
| ! | TCCAAGCTGAATTCTAAGAA+AGG | + | Chr5:97867641-97867660 | MsG0580029507.01.T01:CDS | 35.0% |
| ! | TCTAAAGCAAGTGAAGTAAC+CGG | - | Chr5:97868340-97868359 | None:intergenic | 35.0% |
| ! | TGATTGTCCACAGAGTATTA+AGG | + | Chr5:97867466-97867485 | MsG0580029507.01.T01:CDS | 35.0% |
| !! | ACTGGGGATTTCATTTTTAC+TGG | + | Chr5:97868601-97868620 | MsG0580029507.01.T01:CDS | 35.0% |
| !! | CTGGGGATTTCATTTTTACT+GGG | + | Chr5:97868602-97868621 | MsG0580029507.01.T01:CDS | 35.0% |
| !! | GGAAGGATATTTTTGTGGAA+AGG | + | Chr5:97867963-97867982 | MsG0580029507.01.T01:CDS | 35.0% |
| !! | GTCATGGAAGGATATTTTTG+TGG | + | Chr5:97867958-97867977 | MsG0580029507.01.T01:CDS | 35.0% |
| !! | TGGGGATTTCATTTTTACTG+GGG | + | Chr5:97868603-97868622 | MsG0580029507.01.T01:CDS | 35.0% |
| !! | TGTTGGTAATACTTATGCTC+TGG | + | Chr5:97868567-97868586 | MsG0580029507.01.T01:CDS | 35.0% |
| AAGGATTTATAGCGGCTCTT+GGG | + | Chr5:97868366-97868385 | MsG0580029507.01.T01:CDS | 40.0% | |
| AATATCGAGCTTCGACTTTG+GGG | + | Chr5:97868304-97868323 | MsG0580029507.01.T01:CDS | 40.0% | |
| AATTGGCACTAATTGACGTG+AGG | + | Chr5:97868776-97868795 | MsG0580029507.01.T01:CDS | 40.0% | |
| AGAATATCGAGCTTCGACTT+TGG | + | Chr5:97868302-97868321 | MsG0580029507.01.T01:CDS | 40.0% | |
| AGCTTCTAAGCTCAAACAGA+TGG | - | Chr5:97868270-97868289 | None:intergenic | 40.0% | |
| AGGATGTGGAATATGGAAAG+TGG | + | Chr5:97868118-97868137 | MsG0580029507.01.T01:CDS | 40.0% | |
| ATGGGTTCATTCATTGTTGG+AGG | + | Chr5:97868227-97868246 | MsG0580029507.01.T01:CDS | 40.0% | |
| CAAACAGAGCTCAACAGTAA+AGG | + | Chr5:97869069-97869088 | MsG0580029507.01.T01:CDS | 40.0% | |
| CCAAGGAAACTCAAATGCAA+GGG | - | Chr5:97868731-97868750 | None:intergenic | 40.0% | |
| CGGTTAAGGATGAAAAGTCA+TGG | + | Chr5:97867942-97867961 | MsG0580029507.01.T01:CDS | 40.0% | |
| CTGACAACTGTAGTATCATG+AGG | - | Chr5:97868475-97868494 | None:intergenic | 40.0% | |
| CTTCTAAGCTCAAACAGATG+GGG | - | Chr5:97868268-97868287 | None:intergenic | 40.0% | |
| CTTTACTGTTGAGCTCTGTT+TGG | - | Chr5:97869071-97869090 | None:intergenic | 40.0% | |
| GAATATCGAGCTTCGACTTT+GGG | + | Chr5:97868303-97868322 | MsG0580029507.01.T01:CDS | 40.0% | |
| GCAAGGCTTATATTTACCTC+TGG | + | Chr5:97868079-97868098 | MsG0580029507.01.T01:CDS | 40.0% | |
| GCTTCTAAGCTCAAACAGAT+GGG | - | Chr5:97868269-97868288 | None:intergenic | 40.0% | |
| GGATGTGGAATATGGAAAGT+GGG | + | Chr5:97868119-97868138 | MsG0580029507.01.T01:CDS | 40.0% | |
| TCAAATGCAAGGGAATACAC+AGG | - | Chr5:97868721-97868740 | None:intergenic | 40.0% | |
| TCTGAATTGTCTTGATCCCA+AGG | + | Chr5:97867775-97867794 | MsG0580029507.01.T01:CDS | 40.0% | |
| TGCATCAAGTGACGGTAAAT+TGG | + | Chr5:97868759-97868778 | MsG0580029507.01.T01:CDS | 40.0% | |
| TGGGTTCATTCATTGTTGGA+GGG | + | Chr5:97868228-97868247 | MsG0580029507.01.T01:CDS | 40.0% | |
| TGTTGTGAGGATGTGGAATA+TGG | + | Chr5:97868111-97868130 | MsG0580029507.01.T01:CDS | 40.0% | |
| ! | ATTTTTACTGGGGGTGAAGA+TGG | + | Chr5:97868613-97868632 | MsG0580029507.01.T01:CDS | 40.0% |
| ! | GGAGTAAGACTTTTATGGGT+AGG | + | Chr5:97867993-97868012 | MsG0580029507.01.T01:CDS | 40.0% |
| ! | GTTCCTGGTGATGTTGTTAT+TGG | + | Chr5:97867704-97867723 | MsG0580029507.01.T01:CDS | 40.0% |
| !! | AAGAAGGTGTTGTCAGGATT+TGG | + | Chr5:97868959-97868978 | MsG0580029507.01.T01:CDS | 40.0% |
| !! | CTGATGGGTTCATTCATTGT+TGG | + | Chr5:97868224-97868243 | MsG0580029507.01.T01:CDS | 40.0% |
| !! | CTTGTTTCTGCATCAAGTGA+CGG | + | Chr5:97868751-97868770 | MsG0580029507.01.T01:CDS | 40.0% |
| !! | GAATATGGAAAGTGGGTTGT+CGG | + | Chr5:97868126-97868145 | MsG0580029507.01.T01:CDS | 40.0% |
| !! | GGGGATTTCATTTTTACTGG+GGG | + | Chr5:97868604-97868623 | MsG0580029507.01.T01:CDS | 40.0% |
| !!! | TTTTCTTGTTGGCTTCTGCA+AGG | + | Chr5:97868062-97868081 | MsG0580029507.01.T01:CDS | 40.0% |
| AAGCATGATGCTCAGAAGCA+AGG | - | Chr5:97867841-97867860 | None:intergenic | 45.0% | |
| AAGCTCTGCATGTTGCTACA+TGG | + | Chr5:97868680-97868699 | MsG0580029507.01.T01:CDS | 45.0% | |
| AATCCATGCAACATCCTCTG+TGG | - | Chr5:97868883-97868902 | None:intergenic | 45.0% | |
| ACAGAGCTCAACAGTAAAGG+CGG | + | Chr5:97869072-97869091 | MsG0580029507.01.T01:CDS | 45.0% | |
| AGCTCTGCATGTTGCTACAT+GGG | + | Chr5:97868681-97868700 | MsG0580029507.01.T01:CDS | 45.0% | |
| ATCTCAGATATCAACACCGG+AGG | - | Chr5:97867755-97867774 | None:intergenic | 45.0% | |
| ATGACACTGTTGTGAGGATG+TGG | + | Chr5:97868104-97868123 | MsG0580029507.01.T01:CDS | 45.0% | |
| ATTGTTTGCGGAGGTGAAGA+AGG | + | Chr5:97868943-97868962 | MsG0580029507.01.T01:CDS | 45.0% | |
| CAAGGATTTATAGCGGCTCT+TGG | + | Chr5:97868365-97868384 | MsG0580029507.01.T01:CDS | 45.0% | |
| CAGTGCATTTCATTGAGTGC+CGG | - | Chr5:97868414-97868433 | None:intergenic | 45.0% | |
| CATTGGAAAGAGAGCTACGA+AGG | + | Chr5:97868825-97868844 | MsG0580029507.01.T01:CDS | 45.0% | |
| CTTCGTAGCTCTCTTTCCAA+TGG | - | Chr5:97868827-97868846 | None:intergenic | 45.0% | |
| CTTGATGCAGAAACAAGCCA+AGG | - | Chr5:97868748-97868767 | None:intergenic | 45.0% | |
| GAGTGATCAATGTTCAGCTG+TGG | + | Chr5:97869098-97869117 | MsG0580029507.01.T01:CDS | 45.0% | |
| GCACTCAATGAAATGCACTG+TGG | + | Chr5:97868414-97868433 | MsG0580029507.01.T01:CDS | 45.0% | |
| GCCAAGGAAACTCAAATGCA+AGG | - | Chr5:97868732-97868751 | None:intergenic | 45.0% | |
| GGAGCTGATCGAATTGTTTG+CGG | + | Chr5:97868931-97868950 | MsG0580029507.01.T01:CDS | 45.0% | |
| GTATTTGGCCGAGTAAACGT+GGG | + | Chr5:97869142-97869161 | MsG0580029507.01.T01:CDS | 45.0% | |
| TGTAGCAACATGCAGAGCTT+CGG | - | Chr5:97868680-97868699 | None:intergenic | 45.0% | |
| TGTATTTGGCCGAGTAAACG+TGG | + | Chr5:97869141-97869160 | MsG0580029507.01.T01:CDS | 45.0% | |
| TGTCTTGATCCCAAGGAACT+TGG | + | Chr5:97867782-97867801 | MsG0580029507.01.T01:CDS | 45.0% | |
| TGTGTTGTATGGCCATACTG+AGG | + | Chr5:97868027-97868046 | MsG0580029507.01.T01:CDS | 45.0% | |
| TTAACGTAGAACCTCCACAG+AGG | + | Chr5:97868866-97868885 | MsG0580029507.01.T01:CDS | 45.0% | |
| TTCTGAGCATCATGCTTGGA+AGG | + | Chr5:97867844-97867863 | MsG0580029507.01.T01:CDS | 45.0% | |
| TTGCTTCTGAGCATCATGCT+TGG | + | Chr5:97867840-97867859 | MsG0580029507.01.T01:CDS | 45.0% | |
| ! | AGCTACGAAGGCAAAGCATT+CGG | + | Chr5:97868837-97868856 | MsG0580029507.01.T01:CDS | 45.0% |
| ! | CCCTTGCATTTGAGTTTCCT+TGG | + | Chr5:97868728-97868747 | MsG0580029507.01.T01:CDS | 45.0% |
| ! | TGAAATGCACTGTGGTGTTG+AGG | + | Chr5:97868422-97868441 | MsG0580029507.01.T01:CDS | 45.0% |
| ! | TTGATTCAAAGCACCAGCAG+AGG | - | Chr5:97867678-97867697 | None:intergenic | 45.0% |
| !! | TAGTTGCTGGTGGTACTGAT+GGG | + | Chr5:97868209-97868228 | MsG0580029507.01.T01:CDS | 45.0% |
| ACTACAGTTGTCAGCGCATC+AGG | + | Chr5:97868481-97868500 | MsG0580029507.01.T01:CDS | 50.0% | |
| AGGCATAGTGACTGGGTTTG+GGG | + | Chr5:97868442-97868461 | MsG0580029507.01.T01:CDS | 50.0% | |
| ATCGCATTCCTCTCAACGCA+CGG | - | Chr5:97869020-97869039 | None:intergenic | 50.0% | |
| CACAACAGTGTCATACCCAG+AGG | - | Chr5:97868098-97868117 | None:intergenic | 50.0% | |
| CATTGTTGGAGGGCTGTTGA+AGG | + | Chr5:97868238-97868257 | MsG0580029507.01.T01:CDS | 50.0% | |
| CTCTGGCAAGAAGCCATACT+GGG | + | Chr5:97868584-97868603 | MsG0580029507.01.T01:CDS | 50.0% | |
| CTGGGTATGACACTGTTGTG+AGG | + | Chr5:97868098-97868117 | MsG0580029507.01.T01:CDS | 50.0% | |
| GAATACACAGGACCAGAGTG+GGG | - | Chr5:97868709-97868728 | None:intergenic | 50.0% | |
| GAGGCATAGTGACTGGGTTT+GGG | + | Chr5:97868441-97868460 | MsG0580029507.01.T01:CDS | 50.0% | |
| GATTCAAGGCTGCTAGTTGC+TGG | + | Chr5:97868196-97868215 | MsG0580029507.01.T01:CDS | 50.0% | |
| GCTGATCGAATTGTTTGCGG+AGG | + | Chr5:97868934-97868953 | MsG0580029507.01.T01:CDS | 50.0% | |
| GGAATACACAGGACCAGAGT+GGG | - | Chr5:97868710-97868729 | None:intergenic | 50.0% | |
| GGACACGACTGTTCGTGTTT+GGG | + | Chr5:97868387-97868406 | MsG0580029507.01.T01:CDS | 50.0% | |
| GTTGCATCGTCTAAACCCCT+TGG | + | Chr5:97868148-97868167 | MsG0580029507.01.T01:CDS | 50.0% | |
| GTTGTATGGCCATACTGAGG+CGG | + | Chr5:97868030-97868049 | MsG0580029507.01.T01:CDS | 50.0% | |
| TCTGGCAAGAAGCCATACTG+GGG | + | Chr5:97868585-97868604 | MsG0580029507.01.T01:CDS | 50.0% | |
| TGAGGCATAGTGACTGGGTT+TGG | + | Chr5:97868440-97868459 | MsG0580029507.01.T01:CDS | 50.0% | |
| TGGGATGGGTGGAAAGACAA+AGG | + | Chr5:97869161-97869180 | MsG0580029507.01.T01:CDS | 50.0% | |
| ! | CTAGTTGCTGGTGGTACTGA+TGG | + | Chr5:97868208-97868227 | MsG0580029507.01.T01:CDS | 50.0% |
| ! | GCTACGAAGGCAAAGCATTC+GGG | + | Chr5:97868838-97868857 | MsG0580029507.01.T01:CDS | 50.0% |
| ! | GGTGTTGAGGCATAGTGACT+GGG | + | Chr5:97868435-97868454 | MsG0580029507.01.T01:CDS | 50.0% |
| ! | GGTTCGGACGGTTTTCTTGT+TGG | + | Chr5:97868051-97868070 | MsG0580029507.01.T01:CDS | 50.0% |
| ! | TGGTGTTGAGGCATAGTGAC+TGG | + | Chr5:97868434-97868453 | MsG0580029507.01.T01:CDS | 50.0% |
| !! | ACTTTGGGGTCATGATGGTC+CGG | + | Chr5:97868318-97868337 | MsG0580029507.01.T01:CDS | 50.0% |
| !! | CTTCGACTTTGGGGTCATGA+TGG | + | Chr5:97868313-97868332 | MsG0580029507.01.T01:CDS | 50.0% |
| !! | GAGGTGAAGAAGGTGTTGTC+AGG | + | Chr5:97868953-97868972 | MsG0580029507.01.T01:CDS | 50.0% |
| AACCCCAGAATCCGAATCCG+GGG | - | Chr5:97867915-97867934 | None:intergenic | 55.0% | |
| ATCAGCTGCAACCGCACGAA+TGG | - | Chr5:97868179-97868198 | None:intergenic | 55.0% | |
| ATGGCCATACTGAGGCGGTT+CGG | + | Chr5:97868035-97868054 | MsG0580029507.01.T01:CDS | 55.0% | |
| CAACCCCAGAATCCGAATCC+GGG | - | Chr5:97867916-97867935 | None:intergenic | 55.0% | |
| CAGATATCAACACCGGAGGC+AGG | - | Chr5:97867751-97867770 | None:intergenic | 55.0% | |
| CCAACCCCAGAATCCGAATC+CGG | - | Chr5:97867917-97867936 | None:intergenic | 55.0% | |
| CCACCCATCCCACGTTTACT+CGG | - | Chr5:97869153-97869172 | None:intergenic | 55.0% | |
| CCATGCAACATCCTCTGTGG+AGG | - | Chr5:97868880-97868899 | None:intergenic | 55.0% | |
| CCTCCACAGAGGATGTTGCA+TGG | + | Chr5:97868877-97868896 | MsG0580029507.01.T01:CDS | 55.0% | |
| GCTCTGGCAAGAAGCCATAC+TGG | + | Chr5:97868583-97868602 | MsG0580029507.01.T01:CDS | 55.0% | |
| GGAATCAAAGCAGCCTCTGC+TGG | + | Chr5:97867662-97867681 | MsG0580029507.01.T01:CDS | 55.0% | |
| GGGAATACACAGGACCAGAG+TGG | - | Chr5:97868711-97868730 | None:intergenic | 55.0% | |
| GGGACACGACTGTTCGTGTT+TGG | + | Chr5:97868386-97868405 | MsG0580029507.01.T01:CDS | 55.0% | |
| GTCAATTACCGACCTGCCTC+CGG | + | Chr5:97867736-97867755 | MsG0580029507.01.T01:CDS | 55.0% | |
| TATCAACACCGGAGGCAGGT+CGG | - | Chr5:97867747-97867766 | None:intergenic | 55.0% | |
| TCAAGGCTGCTAGTTGCTGG+TGG | + | Chr5:97868199-97868218 | MsG0580029507.01.T01:CDS | 55.0% | |
| TGGCCGAGTAAACGTGGGAT+GGG | + | Chr5:97869147-97869166 | MsG0580029507.01.T01:CDS | 55.0% | |
| TTGGCCGAGTAAACGTGGGA+TGG | + | Chr5:97869146-97869165 | MsG0580029507.01.T01:CDS | 55.0% | |
| ! | CGACTGTTCGTGTTTGGGAC+CGG | + | Chr5:97868392-97868411 | MsG0580029507.01.T01:CDS | 55.0% |
| ! | GTGCGGTTGCAGCTGATTCA+AGG | + | Chr5:97868182-97868201 | MsG0580029507.01.T01:CDS | 55.0% |
| !! | CGGATTCGGATTCTGGGGTT+GGG | + | Chr5:97867915-97867934 | MsG0580029507.01.T01:CDS | 55.0% |
| !! | GGATTCGGATTCTGGGGTTG+GGG | + | Chr5:97867916-97867935 | MsG0580029507.01.T01:CDS | 55.0% |
| AGCAGAGTCCGTGCGTTGAG+AGG | + | Chr5:97869009-97869028 | MsG0580029507.01.T01:CDS | 60.0% | |
| AGTAGTTCCTGAGGCTGCCC+CGG | + | Chr5:97867895-97867914 | MsG0580029507.01.T01:CDS | 60.0% | |
| CCGAGTAAACGTGGGATGGG+TGG | + | Chr5:97869150-97869169 | MsG0580029507.01.T01:CDS | 60.0% | |
| CCTTGGCTGCACCATTCGTG+CGG | + | Chr5:97868165-97868184 | MsG0580029507.01.T01:CDS | 60.0% | |
| CGCACGAATGGTGCAGCCAA+GGG | - | Chr5:97868167-97868186 | None:intergenic | 60.0% | |
| CTGCCCCGGATTCGGATTCT+GGG | + | Chr5:97867909-97867928 | MsG0580029507.01.T01:CDS | 60.0% | |
| GCACGAATGGTGCAGCCAAG+GGG | - | Chr5:97868166-97868185 | None:intergenic | 60.0% | |
| GCTACATGGGATCCCCACTC+TGG | + | Chr5:97868694-97868713 | MsG0580029507.01.T01:CDS | 60.0% | |
| GGGGCTTCCAGTAGTTCCTG+AGG | + | Chr5:97867886-97867905 | MsG0580029507.01.T01:CDS | 60.0% | |
| TGCCCCGGATTCGGATTCTG+GGG | + | Chr5:97867910-97867929 | MsG0580029507.01.T01:CDS | 60.0% | |
| ! | CCATACTGAGGCGGTTCGGA+CGG | + | Chr5:97868039-97868058 | MsG0580029507.01.T01:CDS | 60.0% |
| ! | TGGGGTTGGGGACTCGGTTA+AGG | + | Chr5:97867928-97867947 | MsG0580029507.01.T01:CDS | 60.0% |
| !! | CCGGATTCGGATTCTGGGGT+TGG | + | Chr5:97867914-97867933 | MsG0580029507.01.T01:CDS | 60.0% |
| !! | GGATTCTGGGGTTGGGGACT+CGG | + | Chr5:97867922-97867941 | MsG0580029507.01.T01:CDS | 60.0% |
| ACGTGAGGAAGCTGCTGCGC+AGG | + | Chr5:97868791-97868810 | MsG0580029507.01.T01:CDS | 65.0% | |
| CCGCACGAATGGTGCAGCCA+AGG | - | Chr5:97868168-97868187 | None:intergenic | 65.0% | |
| CCGTCCGAACCGCCTCAGTA+TGG | - | Chr5:97868042-97868061 | None:intergenic | 65.0% | |
| CGCAGGAGCAAGCGTGCCAT+TGG | + | Chr5:97868808-97868827 | MsG0580029507.01.T01:CDS | 65.0% | |
| GCTGCCCCGGATTCGGATTC+TGG | + | Chr5:97867908-97867927 | MsG0580029507.01.T01:CDS | 65.0% | |
| GGGGCAGCCTCAGGAACTAC+TGG | - | Chr5:97867896-97867915 | None:intergenic | 65.0% | |
| TCCTGAGGCTGCCCCGGATT+CGG | + | Chr5:97867901-97867920 | MsG0580029507.01.T01:CDS | 65.0% | |
| TCCGAATCCGGGGCAGCCTC+AGG | - | Chr5:97867905-97867924 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 97867458 | 97869188 | 97867458 | ID=MsG0580029507.01;Name=MsG0580029507.01 |
| Chr5 | mRNA | 97867458 | 97869188 | 97867458 | ID=MsG0580029507.01.T01;Parent=MsG0580029507.01;Name=MsG0580029507.01.T01;_AED=0.40;_eAED=0.40;_QI=0|-1|0|1|-1|1|1|0|576 |
| Chr5 | exon | 97867458 | 97869188 | 97867458 | ID=MsG0580029507.01.T01:exon:25315;Parent=MsG0580029507.01.T01 |
| Chr5 | CDS | 97867458 | 97869188 | 97867458 | ID=MsG0580029507.01.T01:cds;Parent=MsG0580029507.01.T01 |
| Gene Sequence |
| Protein sequence |
