AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007429.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007429.01.T01 MTR_2g025140 88.942 208 21 2 1 207 1 207 3.15e-132 375
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007429.01.T01 AT4G22260 73.099 171 36 2 41 207 55 219 1.41e-89 267

Find 97 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCAGTAAATAGTTGAAATT+TGG 0.175229 2:-15286920 MsG0280007429.01.T01:three_prime_UTR
TCAAGGAACAAGGAGGTATT+TGG 0.185411 2:-15288307 MsG0280007429.01.T01:three_prime_UTR
GGAGGTGACTTGTATTTATT+TGG 0.198866 2:-15287763 MsG0280007429.01.T01:intron
ATTGCAAGAGTCCCTTATTT+TGG 0.214997 2:-15290871 MsG0280007429.01.T01:intron
AATGCATCATTTGCTCATTA+TGG 0.218823 2:-15289153 MsG0280007429.01.T01:CDS
TTCCCCTATTATTGCACTTT+AGG 0.234240 2:+15286659 None:intergenic
TCGACTAGTGCTTGGGAAAA+AGG 0.235716 2:-15291091 MsG0280007429.01.T01:CDS
TCCCCTATTATTGCACTTTA+GGG 0.235953 2:+15286660 None:intergenic
TCTCCCTAAAGTGCAATAAT+AGG 0.243690 2:-15286663 MsG0280007429.01.T01:three_prime_UTR
AAATAGAAGTTACCAAAATA+AGG 0.254084 2:+15290859 None:intergenic
TTTGTTGTAGTTTGGCATTT+AGG 0.271545 2:+15291476 None:intergenic
ATGAGGGCTTGCCAAACTTA+TGG 0.280986 2:-15287180 MsG0280007429.01.T01:three_prime_UTR
TAATACTTACATGCCATTCT+TGG 0.285610 2:+15288677 None:intergenic
CTCCACATGTATGAGAGTTT+TGG 0.303801 2:-15289230 MsG0280007429.01.T01:CDS
CTCCCTAAAGTGCAATAATA+GGG 0.304635 2:-15286662 MsG0280007429.01.T01:three_prime_UTR
ATGTCTTACTTCACCTTAGC+TGG 0.330534 2:+15287039 None:intergenic
CTTGTTTAATTAATTCTAGC+TGG 0.368362 2:+15286705 None:intergenic
GGTCTATGGTTGCAGGAACT+TGG 0.368546 2:-15288788 MsG0280007429.01.T01:intron
TATTTATTTGTTTAAGTGAC+TGG 0.373134 2:+15291400 None:intergenic
ACCGGAGGTTCCCATAAGTT+TGG 0.376142 2:+15287169 None:intergenic
AGATCTGGATTGCCTATCTA+TGG 0.379023 2:+15286736 None:intergenic
ATGAAACTTCTACCATAGAT+AGG 0.396951 2:-15286748 MsG0280007429.01.T01:three_prime_UTR
CAAGGAACAAGGAGGTATTT+GGG 0.398739 2:-15288306 MsG0280007429.01.T01:three_prime_UTR
TGAGGGCTTGCCAAACTTAT+GGG 0.400759 2:-15287179 MsG0280007429.01.T01:three_prime_UTR
GCCGTCGCCGCCATGATGTT+TGG 0.401650 2:+15291340 None:intergenic
TTTGGCATTTAGGACCATTC+CGG 0.402483 2:+15291486 None:intergenic
AATACTTACATGCCATTCTT+GGG 0.424208 2:+15288678 None:intergenic
CAAAAGAAACGTTAGTTGTA+TGG 0.430108 2:+15291429 None:intergenic
TAGCTGGGCTGAACAAGATC+TGG 0.430204 2:+15286721 None:intergenic
TTGTTTAATTAATTCTAGCT+GGG 0.434787 2:+15286706 None:intergenic
TTTGTTTAAGTGACTGGAAA+GGG 0.441274 2:+15291406 None:intergenic
TATGGTATTTGTCGTTTGGC+GGG 0.441298 2:+15291452 None:intergenic
ATGGTATGGTATTTGTCGTT+TGG 0.443914 2:+15291448 None:intergenic
AATAGAAGTTACCAAAATAA+GGG 0.455664 2:+15290860 None:intergenic
GTATGGTATTTGTCGTTTGG+CGG 0.459905 2:+15291451 None:intergenic
GTTGCTGTGAATTATTATAC+AGG 0.462624 2:-15287784 MsG0280007429.01.T01:three_prime_UTR
TACCGTGAGAAAGATATTAA+CGG 0.462964 2:+15291048 None:intergenic
GGAATGCTTGGTGGTTTGAC+CGG 0.468487 2:-15288763 MsG0280007429.01.T01:CDS
AACTTATGACAAATTTATCA+AGG 0.473190 2:-15288324 MsG0280007429.01.T01:three_prime_UTR
CACTTCATCGACTAGTGCTT+GGG 0.475294 2:-15291098 MsG0280007429.01.T01:CDS
ATGATGTTTGGTGGTGGAAA+TGG 0.485932 2:+15291352 None:intergenic
ACACTTCATCGACTAGTGCT+TGG 0.487835 2:-15291099 MsG0280007429.01.T01:CDS
GAAACGTTAGTTGTATGGTA+TGG 0.488501 2:+15291434 None:intergenic
GAAGACGATAACGGATTTGA+GGG 0.491989 2:+15291248 None:intergenic
GGAAGACGATAACGGATTTG+AGG 0.492911 2:+15291247 None:intergenic
CAATATGTTGAGCAAGAAAC+CGG 0.493032 2:+15288744 None:intergenic
TTCCGGCGACTATTAGTACT+TGG 0.493627 2:+15291503 None:intergenic
CTATGGTTGCAGGAACTTGG+AGG 0.498887 2:-15288785 MsG0280007429.01.T01:intron
AGGAACTTGGAGGGAATGCT+TGG 0.505846 2:-15288775 MsG0280007429.01.T01:CDS
AACTTGGAGGGAATGCTTGG+TGG 0.513318 2:-15288772 MsG0280007429.01.T01:CDS
ATGCATTTCATTCCAGCTCT+CGG 0.525237 2:+15289169 None:intergenic
GCCAAACTTATGGGAACCTC+CGG 0.533794 2:-15287170 MsG0280007429.01.T01:three_prime_UTR
GATTTGTTGAGGTGTGAGGT+TGG 0.533926 2:+15291295 None:intergenic
TAATAATTCACAGCAACCTC+AGG 0.534240 2:+15287790 None:intergenic
ATTCTGTGTGAATGATGGTC+CGG 0.538380 2:+15291539 None:intergenic
GTATTTAATAAGCCCAAGAA+TGG 0.539687 2:-15288690 MsG0280007429.01.T01:CDS
GACGTAGAGGAAGACGATAA+CGG 0.540292 2:+15291239 None:intergenic
TATTGCACTTTAGGGAGAAG+AGG 0.549529 2:+15286668 None:intergenic
ACAATTGAAGCAGGCTGTGA+AGG 0.550083 2:-15287099 MsG0280007429.01.T01:three_prime_UTR
TTCACAGCAACCTCAGGAGC+CGG 0.550908 2:+15287796 None:intergenic
TCAGTCTGTACAATTGAAGC+AGG 0.558599 2:-15287108 MsG0280007429.01.T01:three_prime_UTR
CATGTGGAGAATTGACATAA+AGG 0.561610 2:+15289244 None:intergenic
ATCCGTTAATATCTTTCTCA+CGG 0.562693 2:-15291050 MsG0280007429.01.T01:intron
ATGTTTGGTGGTGGAAATGG+TGG 0.563886 2:+15291355 None:intergenic
ATTTCCACCACCAAACATCA+TGG 0.564505 2:-15291350 MsG0280007429.01.T01:exon
AGCATATTCTGTGTGAATGA+TGG 0.566237 2:+15291534 None:intergenic
ATTTGTTTAAGTGACTGGAA+AGG 0.568786 2:+15291405 None:intergenic
GCCGCCATGATGTTTGGTGG+TGG 0.573811 2:+15291346 None:intergenic
CTGCATATGAATGAGGCGAC+CGG 0.574364 2:+15287151 None:intergenic
CTGAACATTGTAAGACAATG+AGG 0.580218 2:-15287197 MsG0280007429.01.T01:three_prime_UTR
ACCAAACATCATGGCGGCGA+CGG 0.582086 2:-15291341 MsG0280007429.01.T01:exon
TGTTACTTCTAATCCAGCTA+AGG 0.582853 2:-15287052 MsG0280007429.01.T01:three_prime_UTR
TCCCTAAAGTGCAATAATAG+GGG 0.589775 2:-15286661 MsG0280007429.01.T01:three_prime_UTR
TGATGATTTGTTGAGGTGTG+AGG 0.589989 2:+15291291 None:intergenic
GACAAATTTATCAAGGAACA+AGG 0.592572 2:-15288317 MsG0280007429.01.T01:three_prime_UTR
TCTGCATCTGCATATGAATG+AGG 0.596959 2:+15287144 None:intergenic
ATCGTGATAGAAATTATGCA+AGG 0.599946 2:-15290912 MsG0280007429.01.T01:CDS
AGTAACGGAATCTAAAGGAG+AGG 0.604736 2:+15291144 None:intergenic
CTCATACACCCTCATTGTAG+AGG 0.605748 2:+15286889 None:intergenic
AGTACTAATAGTCGCCGGAA+TGG 0.608979 2:-15291500 MsG0280007429.01.T01:five_prime_UTR
TATGGTTGCAGGAACTTGGA+GGG 0.615759 2:-15288784 MsG0280007429.01.T01:intron
GCTGTGAATTATTATACAGG+AGG 0.620648 2:-15287781 MsG0280007429.01.T01:three_prime_UTR
ATTTCTATATCATACTGTAG+AGG 0.622575 2:+15286953 None:intergenic
GTCGCCGCCATGATGTTTGG+TGG 0.627726 2:+15291343 None:intergenic
AACCAAAACTCTCATACATG+TGG 0.629436 2:+15289228 None:intergenic
GATGAGATTCCTCTACAATG+AGG 0.633764 2:-15286898 MsG0280007429.01.T01:three_prime_UTR
CATATGAATGAGGCGACCGG+AGG 0.633813 2:+15287154 None:intergenic
ATGAGATTCCTCTACAATGA+GGG 0.634949 2:-15286897 MsG0280007429.01.T01:three_prime_UTR
TACCAAGTACTAATAGTCGC+CGG 0.643897 2:-15291505 MsG0280007429.01.T01:five_prime_UTR
ATGATGATGATGATTTGTTG+AGG 0.646145 2:+15291284 None:intergenic
AGCTAAGGTGAAGTAAGACA+TGG 0.655418 2:-15287037 MsG0280007429.01.T01:three_prime_UTR
TGAACATTGTAAGACAATGA+GGG 0.657949 2:-15287196 MsG0280007429.01.T01:three_prime_UTR
GCACGAATTGAAAGACGTAG+AGG 0.662575 2:+15291226 None:intergenic
TCATTCATATGCAGATGCAG+AGG 0.664876 2:-15287142 MsG0280007429.01.T01:three_prime_UTR
AAGAAAAGAAATAGAATACG+AGG 0.667273 2:-15286982 MsG0280007429.01.T01:three_prime_UTR
TCCACCACCAAACATCATGG+CGG 0.747722 2:-15291347 MsG0280007429.01.T01:exon
AAATTTATCAAGGAACAAGG+AGG 0.753148 2:-15288314 MsG0280007429.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTATTTTTTTGAAAACT+CGG + Chr2:15287706-15287725 None:intergenic 10.0%
!! AAAAAAGATAAACAATGTTT+AGG + Chr2:15290735-15290754 None:intergenic 15.0%
!! AAAAAGATAAACAATGTTTA+GGG + Chr2:15290734-15290753 None:intergenic 15.0%
!! ACTTAATAAAATAAACTACA+TGG + Chr2:15288504-15288523 None:intergenic 15.0%
!! CTTAATAAAATAAACTACAT+GGG + Chr2:15288503-15288522 None:intergenic 15.0%
!! TAACTATTGTTATATATTTG+TGG - Chr2:15288903-15288922 MsG0280007429.01.T01:intron 15.0%
!! TCTGATATAAAAAGAAAAAA+GGG + Chr2:15288693-15288712 None:intergenic 15.0%
!! TTAACAGATTAATATTTGAA+AGG + Chr2:15287357-15287376 None:intergenic 15.0%
!! TTAATAATCATAATCAATGA+AGG - Chr2:15290237-15290256 MsG0280007429.01.T01:intron 15.0%
!! TTCTGATATAAAAAGAAAAA+AGG + Chr2:15288694-15288713 None:intergenic 15.0%
!!! TTGTTTATCTTTTTTGAATA+TGG - Chr2:15290740-15290759 MsG0280007429.01.T01:intron 15.0%
!!! TTTGAGTTTTATTCTTAAAT+TGG + Chr2:15290680-15290699 None:intergenic 15.0%
!!! TTTTTATATCAGAAAAGAAA+GGG - Chr2:15288700-15288719 MsG0280007429.01.T01:CDS 15.0%
!! AAAAGATAAACAATGTTTAG+GGG + Chr2:15290733-15290752 None:intergenic 20.0%
!! AAATAGAAGTTACCAAAATA+AGG + Chr2:15287317-15287336 None:intergenic 20.0%
!! AAATCTAGGTAGAAATATAA+TGG + Chr2:15290444-15290463 None:intergenic 20.0%
!! AACTCAAATGTTTAATTAAG+TGG - Chr2:15290692-15290711 MsG0280007429.01.T01:intron 20.0%
!! AACTTATGACAAATTTATCA+AGG - Chr2:15289849-15289868 MsG0280007429.01.T01:intron 20.0%
!! AATAAATGAAAGCAAATAGA+TGG - Chr2:15290180-15290199 MsG0280007429.01.T01:intron 20.0%
!! AATAGAAGTTACCAAAATAA+GGG + Chr2:15287316-15287335 None:intergenic 20.0%
!! ATGTTAAATTGCTTACAAAA+TGG - Chr2:15287397-15287416 MsG0280007429.01.T01:intron 20.0%
!! TATTTATTTGTTTAAGTGAC+TGG + Chr2:15286776-15286795 None:intergenic 20.0%
!!! AACAGCAAATAATTCATTTT+AGG + Chr2:15287522-15287541 None:intergenic 20.0%
!!! ATGTTTTCATAATTAAGTGT+TGG - Chr2:15289962-15289981 MsG0280007429.01.T01:intron 20.0%
!!! ATTAGTTGAATTTTCAGTAA+CGG + Chr2:15287047-15287066 None:intergenic 20.0%
!!! ATTATGATTCAATGGTTTTA+TGG + Chr2:15289988-15290007 None:intergenic 20.0%
!!! CTTTTTATATCAGAAAAGAA+AGG - Chr2:15288699-15288718 MsG0280007429.01.T01:CDS 20.0%
!!! TACTGCTTTAAAAAAATCAT+AGG + Chr2:15290876-15290895 None:intergenic 20.0%
!!! TTATAATTTTGATACCTTCA+AGG + Chr2:15287765-15287784 None:intergenic 20.0%
!!! TTGTTTAATTAATTCTAGCT+GGG + Chr2:15291470-15291489 None:intergenic 20.0%
!!! TTTCTTATTTGATATTCGAT+TGG - Chr2:15287154-15287173 MsG0280007429.01.T01:three_prime_UTR 20.0%
! AAAAATTGAAAGATGTAGCA+GGG + Chr2:15289549-15289568 None:intergenic 25.0%
! AAAGAGACCAAATGAAAAAT+TGG - Chr2:15289625-15289644 MsG0280007429.01.T01:intron 25.0%
! AAAGATAAACAATGTTTAGG+GGG + Chr2:15290732-15290751 None:intergenic 25.0%
! AAGAAAAGAAATAGAATACG+AGG - Chr2:15291191-15291210 MsG0280007429.01.T01:CDS 25.0%
! ACTTAAAAGATATGCATTCA+TGG + Chr2:15287794-15287813 None:intergenic 25.0%
! ATACTGTGAATATTAACACA+TGG - Chr2:15289176-15289195 MsG0280007429.01.T01:CDS 25.0%
! ATATAAATGAATGTTGAACC+AGG + Chr2:15290582-15290601 None:intergenic 25.0%
! ATCGTACAGATTATCTAAAA+GGG + Chr2:15290928-15290947 None:intergenic 25.0%
! ATGAAAAATTGGCACTTATT+TGG - Chr2:15289636-15289655 MsG0280007429.01.T01:intron 25.0%
! ATGTGTAATTCAGTAAAACA+TGG + Chr2:15289723-15289742 None:intergenic 25.0%
! ATGTTAACTGTTTATAGGTT+TGG - Chr2:15289935-15289954 MsG0280007429.01.T01:intron 25.0%
! ATTTACTAAATGATCAATGC+AGG + Chr2:15290207-15290226 None:intergenic 25.0%
! ATTTCTATATCATACTGTAG+AGG + Chr2:15291223-15291242 None:intergenic 25.0%
! CTCTTCAAAAACAAATCTTA+TGG + Chr2:15289143-15289162 None:intergenic 25.0%
! CTTGTTTAATTAATTCTAGC+TGG + Chr2:15291471-15291490 None:intergenic 25.0%
! GCAAGATAATTATGATTCAA+TGG + Chr2:15289996-15290015 None:intergenic 25.0%
! GGACAAAAACATTAACTTAA+CGG - Chr2:15288007-15288026 MsG0280007429.01.T01:intron 25.0%
! GTCAGTAAATAGTTGAAATT+TGG - Chr2:15291253-15291272 MsG0280007429.01.T01:CDS 25.0%
! TACCAAATAAATCATGATTC+AGG + Chr2:15290020-15290039 None:intergenic 25.0%
! TACTGTGAATATTAACACAT+GGG - Chr2:15289177-15289196 MsG0280007429.01.T01:CDS 25.0%
! TCATCTGAAGAAAATGATAT+TGG + Chr2:15290502-15290521 None:intergenic 25.0%
! TCCAATTACTTGTAAATGTA+GGG - Chr2:15288839-15288858 MsG0280007429.01.T01:intron 25.0%
! TGAAAAGAGACAAATATTGA+GGG - Chr2:15289227-15289246 MsG0280007429.01.T01:CDS 25.0%
! TGTACATGTTAACTGTTTAT+AGG - Chr2:15289930-15289949 MsG0280007429.01.T01:intron 25.0%
! TTATTGCATGCAATAAGTTT+GGG - Chr2:15289364-15289383 MsG0280007429.01.T01:intron 25.0%
! TTATTTAGCAAAAGCAAACT+AGG + Chr2:15289691-15289710 None:intergenic 25.0%
! TTTATTGCATGCAATAAGTT+TGG - Chr2:15289363-15289382 MsG0280007429.01.T01:intron 25.0%
!! AACACAGTAAATCTTGATTT+TGG + Chr2:15287950-15287969 None:intergenic 25.0%
!! ATAAGTGCCAATTTTTCATT+TGG + Chr2:15289635-15289654 None:intergenic 25.0%
!! GAAGGAAATCTAAACAATTT+TGG + Chr2:15290265-15290284 None:intergenic 25.0%
!! TTTGAAACTTATCATATGCT+TGG + Chr2:15289608-15289627 None:intergenic 25.0%
!!! AAGATTTGTTTTTGAAGAGT+CGG - Chr2:15289144-15289163 MsG0280007429.01.T01:intron 25.0%
!!! ATTTTTTTCCTTTAATGTGC+TGG - Chr2:15289060-15289079 MsG0280007429.01.T01:intron 25.0%
AAAACCTAAAATGCAACAGA+AGG - Chr2:15287975-15287994 MsG0280007429.01.T01:intron 30.0%
AAATTTATCAAGGAACAAGG+AGG - Chr2:15289859-15289878 MsG0280007429.01.T01:intron 30.0%
AAGTTCACAAATCACAGTAT+AGG + Chr2:15288390-15288409 None:intergenic 30.0%
AATACTTACATGCCATTCTT+GGG + Chr2:15289498-15289517 None:intergenic 30.0%
AATCGATAGACAAATTGACA+AGG + Chr2:15288328-15288347 None:intergenic 30.0%
AATGCATCATTTGCTCATTA+TGG - Chr2:15289020-15289039 MsG0280007429.01.T01:intron 30.0%
ACAATAAACGATGAATGTGA+AGG + Chr2:15290283-15290302 None:intergenic 30.0%
ACTAAAGTATACAAGCAAAG+GGG + Chr2:15290800-15290819 None:intergenic 30.0%
ATCCGTTAATATCTTTCTCA+CGG - Chr2:15287123-15287142 MsG0280007429.01.T01:three_prime_UTR 30.0%
ATCGTGATAGAAATTATGCA+AGG - Chr2:15287261-15287280 MsG0280007429.01.T01:intron 30.0%
ATGAAACTTCTACCATAGAT+AGG - Chr2:15291425-15291444 MsG0280007429.01.T01:five_prime_UTR 30.0%
ATGTAATATCCCATTTCCAA+AGG - Chr2:15288055-15288074 MsG0280007429.01.T01:intron 30.0%
ATGTGATTAAGTAACTAACC+TGG - Chr2:15290319-15290338 MsG0280007429.01.T01:intron 30.0%
ATGTTTGCAATGAATTTGAC+AGG - Chr2:15288186-15288205 MsG0280007429.01.T01:intron 30.0%
ATTAAGTAACTAACCTGGTT+TGG - Chr2:15290324-15290343 MsG0280007429.01.T01:intron 30.0%
ATTGACTAATCCAGTTTATG+AGG - Chr2:15288602-15288621 MsG0280007429.01.T01:intron 30.0%
ATTTACAACAGAGTGAAGAA+TGG + Chr2:15288300-15288319 None:intergenic 30.0%
ATTTGGTATGAAATCAGTTG+TGG - Chr2:15290032-15290051 MsG0280007429.01.T01:intron 30.0%
ATTTGTTTAAGTGACTGGAA+AGG + Chr2:15286771-15286790 None:intergenic 30.0%
CAAAAATTGAAAGATGTAGC+AGG + Chr2:15289550-15289569 None:intergenic 30.0%
CAAAAGAAACGTTAGTTGTA+TGG + Chr2:15286747-15286766 None:intergenic 30.0%
CAAACCAAAATACACAAACA+TGG + Chr2:15288437-15288456 None:intergenic 30.0%
CATCGTACAGATTATCTAAA+AGG + Chr2:15290929-15290948 None:intergenic 30.0%
CATTATGGAAGTAAGATCTT+TGG - Chr2:15289035-15289054 MsG0280007429.01.T01:intron 30.0%
CTACAAAAAATTACCAAACC+AGG + Chr2:15290340-15290359 None:intergenic 30.0%
CTCCTGAATCATGATTTATT+TGG - Chr2:15290015-15290034 MsG0280007429.01.T01:intron 30.0%
CTGAAAAGAGACAAATATTG+AGG - Chr2:15289226-15289245 MsG0280007429.01.T01:CDS 30.0%
GAAAAGAGACAAATATTGAG+GGG - Chr2:15289228-15289247 MsG0280007429.01.T01:CDS 30.0%
GACAAATTTATCAAGGAACA+AGG - Chr2:15289856-15289875 MsG0280007429.01.T01:intron 30.0%
GACTAAAGTATACAAGCAAA+GGG + Chr2:15290801-15290820 None:intergenic 30.0%
GATACAACCTTACACATTTA+GGG - Chr2:15287923-15287942 MsG0280007429.01.T01:intron 30.0%
GTATTTAATAAGCCCAAGAA+TGG - Chr2:15289483-15289502 MsG0280007429.01.T01:intron 30.0%
GTCCAATTACTTGTAAATGT+AGG - Chr2:15288838-15288857 MsG0280007429.01.T01:intron 30.0%
GTTGCTGTGAATTATTATAC+AGG - Chr2:15290389-15290408 MsG0280007429.01.T01:intron 30.0%
TAATACTTACATGCCATTCT+TGG + Chr2:15289499-15289518 None:intergenic 30.0%
TACCGTGAGAAAGATATTAA+CGG + Chr2:15287128-15287147 None:intergenic 30.0%
TACGCCAATTAACACATAAA+AGG + Chr2:15288367-15288386 None:intergenic 30.0%
TACGTTCAGATTTGTAGTTT+AGG - Chr2:15289265-15289284 MsG0280007429.01.T01:intron 30.0%
TAGTCTCTGAATGTATTGAA+CGG + Chr2:15287899-15287918 None:intergenic 30.0%
TATACTTTAGTCAGAATACC+AGG - Chr2:15290809-15290828 MsG0280007429.01.T01:intron 30.0%
TCCCTACATTTACAAGTAAT+TGG + Chr2:15288843-15288862 None:intergenic 30.0%
TGAACATTGTAAGACAATGA+GGG - Chr2:15290977-15290996 MsG0280007429.01.T01:intron 30.0%
TGACTAAAGTATACAAGCAA+AGG + Chr2:15290802-15290821 None:intergenic 30.0%
TGATACAACCTTACACATTT+AGG - Chr2:15287922-15287941 MsG0280007429.01.T01:intron 30.0%
TGGGATATTACATACATCTA+TGG + Chr2:15288048-15288067 None:intergenic 30.0%
TTAGGAAAATAATCACAGAG+TGG - Chr2:15289283-15289302 MsG0280007429.01.T01:intron 30.0%
TTTAGAAGAAAACTAACAGC+TGG + Chr2:15288735-15288754 None:intergenic 30.0%
TTTGGTATGAAATCAGTTGT+GGG - Chr2:15290033-15290052 MsG0280007429.01.T01:intron 30.0%
TTTGTTTAAGTGACTGGAAA+GGG + Chr2:15286770-15286789 None:intergenic 30.0%
! AAGCAAAGGGGTTTTTATTA+GGG + Chr2:15290788-15290807 None:intergenic 30.0%
! AGGTTAGTTACTTAATCACA+TGG + Chr2:15290320-15290339 None:intergenic 30.0%
! CAGCTTCAATTGATATTTTC+AGG - Chr2:15287208-15287227 MsG0280007429.01.T01:three_prime_UTR 30.0%
! CTGCTACATCTTTCAATTTT+TGG - Chr2:15289548-15289567 MsG0280007429.01.T01:intron 30.0%
! GCATCACAATCTAAAATTGA+TGG + Chr2:15288415-15288434 None:intergenic 30.0%
! TGCTCCTTTTATGTGTTAAT+TGG - Chr2:15288360-15288379 MsG0280007429.01.T01:intron 30.0%
! TTTGTTGTAGTTTGGCATTT+AGG + Chr2:15286700-15286719 None:intergenic 30.0%
!! AACTGGATTAGTCAATTCAT+AGG + Chr2:15288598-15288617 None:intergenic 30.0%
!! ATGATGATGATGATTTGTTG+AGG + Chr2:15286892-15286911 None:intergenic 30.0%
!! GCATATCTTTTAAGTGAGTT+TGG - Chr2:15287799-15287818 MsG0280007429.01.T01:three_prime_UTR 30.0%
!! TTTTCAGTAACGGAATCTAA+AGG + Chr2:15287037-15287056 None:intergenic 30.0%
!!! CATGTTTGTGTATTTTGGTT+TGG - Chr2:15288435-15288454 MsG0280007429.01.T01:intron 30.0%
!!! GGTTTGGTAATTTTTTGTAG+AGG - Chr2:15290340-15290359 MsG0280007429.01.T01:intron 30.0%
!!! TATTTTGGTTTGGTCTAACA+TGG - Chr2:15288445-15288464 MsG0280007429.01.T01:intron 30.0%
!!! TGTTCATATTTTCTAGCTCA+GGG + Chr2:15288153-15288172 None:intergenic 30.0%
!!! TTGTTCATATTTTCTAGCTC+AGG + Chr2:15288154-15288173 None:intergenic 30.0%
!!! TTTTTTGAAAACTCGGTATC+TGG + Chr2:15287699-15287718 None:intergenic 30.0%
AACCAAAACTCTCATACATG+TGG + Chr2:15288948-15288967 None:intergenic 35.0%
ACAAGATACCAGCACATTAA+AGG + Chr2:15289071-15289090 None:intergenic 35.0%
AGAGGAGTTGAAAAAAATGC+CGG - Chr2:15290358-15290377 MsG0280007429.01.T01:intron 35.0%
AGATGAATTTCAAACCTCCA+GGG - Chr2:15290516-15290535 MsG0280007429.01.T01:intron 35.0%
AGCAGTAAAATTTCTCACGT+TGG - Chr2:15290889-15290908 MsG0280007429.01.T01:CDS 35.0%
AGCATATTCTGTGTGAATGA+TGG + Chr2:15286642-15286661 None:intergenic 35.0%
AGGATTAGGTTAATTGTCTG+GGG - Chr2:15290829-15290848 MsG0280007429.01.T01:intron 35.0%
ATGAGATTCCTCTACAATGA+GGG - Chr2:15291276-15291295 MsG0280007429.01.T01:CDS 35.0%
ATGCAATAAGTTTGGGTCTA+TGG - Chr2:15289371-15289390 MsG0280007429.01.T01:intron 35.0%
ATGGTATGGTATTTGTCGTT+TGG + Chr2:15286728-15286747 None:intergenic 35.0%
CAATATGTTGAGCAAGAAAC+CGG + Chr2:15289432-15289451 None:intergenic 35.0%
CAGGATTAGGTTAATTGTCT+GGG - Chr2:15290828-15290847 MsG0280007429.01.T01:intron 35.0%
CATGTGGAGAATTGACATAA+AGG + Chr2:15288932-15288951 None:intergenic 35.0%
CTAAATCCATCTTCAATGAG+GGG - Chr2:15288262-15288281 MsG0280007429.01.T01:intron 35.0%
CTCCCTAAAGTGCAATAATA+GGG - Chr2:15291511-15291530 MsG0280007429.01.T01:five_prime_UTR 35.0%
CTGAACATTGTAAGACAATG+AGG - Chr2:15290976-15290995 MsG0280007429.01.T01:intron 35.0%
GAAACGTTAGTTGTATGGTA+TGG + Chr2:15286742-15286761 None:intergenic 35.0%
GCTAAATCCATCTTCAATGA+GGG - Chr2:15288261-15288280 MsG0280007429.01.T01:intron 35.0%
GCTGTGAATTATTATACAGG+AGG - Chr2:15290392-15290411 MsG0280007429.01.T01:intron 35.0%
GGATTTAAATTGAAACTGGG+GGG + Chr2:15287622-15287641 None:intergenic 35.0%
GGGATTTAAATTGAAACTGG+GGG + Chr2:15287623-15287642 None:intergenic 35.0%
GGGGATTTAAATTGAAACTG+GGG + Chr2:15287624-15287643 None:intergenic 35.0%
GGGGGATTTAAATTGAAACT+GGG + Chr2:15287625-15287644 None:intergenic 35.0%
TAATAATTCACAGCAACCTC+AGG + Chr2:15290386-15290405 None:intergenic 35.0%
TCCCCTATTATTGCACTTTA+GGG + Chr2:15291516-15291535 None:intergenic 35.0%
TCCCTAAAGTGCAATAATAG+GGG - Chr2:15291512-15291531 MsG0280007429.01.T01:five_prime_UTR 35.0%
TCTCCCTAAAGTGCAATAAT+AGG - Chr2:15291510-15291529 MsG0280007429.01.T01:five_prime_UTR 35.0%
TGCTAAATCCATCTTCAATG+AGG - Chr2:15288260-15288279 MsG0280007429.01.T01:intron 35.0%
TTAGTCAGAATACCAGGATT+AGG - Chr2:15290815-15290834 MsG0280007429.01.T01:intron 35.0%
TTCCCCTATTATTGCACTTT+AGG + Chr2:15291517-15291536 None:intergenic 35.0%
TTGGTATGAAATCAGTTGTG+GGG - Chr2:15290034-15290053 MsG0280007429.01.T01:intron 35.0%
TTTCAAGACATACCTATCGT+AGG + Chr2:15290559-15290578 None:intergenic 35.0%
! AGGCAATGAAGCATTTGATA+TGG + Chr2:15290856-15290875 None:intergenic 35.0%
! CAAGCAAAGGGGTTTTTATT+AGG + Chr2:15290789-15290808 None:intergenic 35.0%
! GATGCCATGTTTGTGTATTT+TGG - Chr2:15288430-15288449 MsG0280007429.01.T01:intron 35.0%
! GGAGGTGACTTGTATTTATT+TGG - Chr2:15290410-15290429 MsG0280007429.01.T01:intron 35.0%
! TGTTACTTCTAATCCAGCTA+AGG - Chr2:15291121-15291140 MsG0280007429.01.T01:CDS 35.0%
! TTTTGGTCCCTAAATGTGTA+AGG + Chr2:15287933-15287952 None:intergenic 35.0%
!! ACATGTATGAGAGTTTTGGT+TGG - Chr2:15288947-15288966 MsG0280007429.01.T01:intron 35.0%
!! ATTGCAAGAGTCCCTTATTT+TGG - Chr2:15287302-15287321 MsG0280007429.01.T01:intron 35.0%
!!! CTAAAGGAGAGGTTTTAGAA+GGG + Chr2:15287021-15287040 None:intergenic 35.0%
!!! TCTAAAGGAGAGGTTTTAGA+AGG + Chr2:15287022-15287041 None:intergenic 35.0%
AATACTAGAAGGCCTACGAT+AGG - Chr2:15290544-15290563 MsG0280007429.01.T01:intron 40.0%
AGATCTGGATTGCCTATCTA+TGG + Chr2:15291440-15291459 None:intergenic 40.0%
AGCTAAGGTGAAGTAAGACA+TGG - Chr2:15291136-15291155 MsG0280007429.01.T01:CDS 40.0%
ATCGTAGGCCTTCTAGTATT+TGG + Chr2:15290544-15290563 None:intergenic 40.0%
ATGAATTTGACAGGCCAACA+AGG - Chr2:15288195-15288214 MsG0280007429.01.T01:intron 40.0%
ATGCATTTCATTCCAGCTCT+CGG + Chr2:15289007-15289026 None:intergenic 40.0%
ATGTCTTACTTCACCTTAGC+TGG + Chr2:15291137-15291156 None:intergenic 40.0%
ATTCTGTGTGAATGATGGTC+CGG + Chr2:15286637-15286656 None:intergenic 40.0%
ATTTCCACCACCAAACATCA+TGG - Chr2:15286823-15286842 MsG0280007429.01.T01:three_prime_UTR 40.0%
CAAAAAGCTGAGTCTCTACA+CGG + Chr2:15290112-15290131 None:intergenic 40.0%
CAAACTAGGTCAGTTTGTAC+AGG + Chr2:15289677-15289696 None:intergenic 40.0%
CAGATGAATTTCAAACCTCC+AGG - Chr2:15290515-15290534 MsG0280007429.01.T01:intron 40.0%
CCAGACAATTAACCTAATCC+TGG + Chr2:15290830-15290849 None:intergenic 40.0%
CCAGGATTAGGTTAATTGTC+TGG - Chr2:15290827-15290846 MsG0280007429.01.T01:intron 40.0%
CTACACGGCTAGAATAATCT+TGG + Chr2:15290097-15290116 None:intergenic 40.0%
CTCTTCGAATCCTCATAAAC+TGG + Chr2:15288615-15288634 None:intergenic 40.0%
GATAGGTATGTCTTGAAACC+TGG - Chr2:15290561-15290580 MsG0280007429.01.T01:intron 40.0%
GATGAGATTCCTCTACAATG+AGG - Chr2:15291275-15291294 MsG0280007429.01.T01:CDS 40.0%
GGGGGGATTTAAATTGAAAC+TGG + Chr2:15287626-15287645 None:intergenic 40.0%
TAAGTTCCCCTCATTGAAGA+TGG + Chr2:15288271-15288290 None:intergenic 40.0%
TACAACAGAGTGAAGAATGG+CGG + Chr2:15288297-15288316 None:intergenic 40.0%
TACCAAGTACTAATAGTCGC+CGG - Chr2:15286668-15286687 MsG0280007429.01.T01:three_prime_UTR 40.0%
TCAGTCTGTACAATTGAAGC+AGG - Chr2:15291065-15291084 MsG0280007429.01.T01:CDS 40.0%
TCATTCATATGCAGATGCAG+AGG - Chr2:15291031-15291050 MsG0280007429.01.T01:intron 40.0%
TCTGCATCTGCATATGAATG+AGG + Chr2:15291032-15291051 None:intergenic 40.0%
TTCACTCGAGGCAAAAAAAC+TGG - Chr2:15290464-15290483 MsG0280007429.01.T01:intron 40.0%
TTGCCTCGAGTGAAAAATCT+AGG + Chr2:15290458-15290477 None:intergenic 40.0%
! AGTAACGGAATCTAAAGGAG+AGG + Chr2:15287032-15287051 None:intergenic 40.0%
! CTACCTAGATTTTTCACTCG+AGG - Chr2:15290452-15290471 MsG0280007429.01.T01:intron 40.0%
! CTCCACATGTATGAGAGTTT+TGG - Chr2:15288943-15288962 MsG0280007429.01.T01:intron 40.0%
! GAAGCCTTCTGTTGCATTTT+AGG + Chr2:15287982-15288001 None:intergenic 40.0%
! GACTGCTACTAAGATTTTGC+AGG + Chr2:15289117-15289136 None:intergenic 40.0%
! GTATGGTATTTGTCGTTTGG+CGG + Chr2:15286725-15286744 None:intergenic 40.0%
! TATGGTATTTGTCGTTTGGC+GGG + Chr2:15286724-15286743 None:intergenic 40.0%
! TATTGCACTTTAGGGAGAAG+AGG + Chr2:15291508-15291527 None:intergenic 40.0%
! TTTGGCATTTAGGACCATTC+CGG + Chr2:15286690-15286709 None:intergenic 40.0%
!! ATGATGTTTGGTGGTGGAAA+TGG + Chr2:15286824-15286843 None:intergenic 40.0%
!! ATTTGACCCTTTGGGTTAGT+TGG - Chr2:15287665-15287684 MsG0280007429.01.T01:intron 40.0%
!! CAAGGAACAAGGAGGTATTT+GGG - Chr2:15289867-15289886 MsG0280007429.01.T01:intron 40.0%
!! GAAGACGATAACGGATTTGA+GGG + Chr2:15286928-15286947 None:intergenic 40.0%
!! TCAAGGAACAAGGAGGTATT+TGG - Chr2:15289866-15289885 MsG0280007429.01.T01:intron 40.0%
!! TGATGATTTGTTGAGGTGTG+AGG + Chr2:15286885-15286904 None:intergenic 40.0%
!!! GGTGGTGAGTTTTTTAGTGT+TGG + Chr2:15286803-15286822 None:intergenic 40.0%
!!! TGTATGAGAGTTTTGGTTGG+TGG - Chr2:15288950-15288969 MsG0280007429.01.T01:intron 40.0%
AAAACACCGCACATCTCCTT+TGG + Chr2:15288074-15288093 None:intergenic 45.0%
AAAACTCGGTATCTGGTCCA+AGG + Chr2:15287692-15287711 None:intergenic 45.0%
AAATTGAAGAGCCAAGCAGC+AGG + Chr2:15289759-15289778 None:intergenic 45.0%
AAGTTTGGGTCTATGGTTGC+AGG - Chr2:15289378-15289397 MsG0280007429.01.T01:intron 45.0%
AATCAAACCTAAGCCTCGAG+AGG + Chr2:15287599-15287618 None:intergenic 45.0%
AATTTGACAGGCCAACAAGG+TGG - Chr2:15288198-15288217 MsG0280007429.01.T01:intron 45.0%
ACAATTGAAGCAGGCTGTGA+AGG - Chr2:15291074-15291093 MsG0280007429.01.T01:CDS 45.0%
AGCTAGATTGCAGGTCATGA+AGG + Chr2:15288234-15288253 None:intergenic 45.0%
AGTACTAATAGTCGCCGGAA+TGG - Chr2:15286673-15286692 MsG0280007429.01.T01:three_prime_UTR 45.0%
ATGAGGGCTTGCCAAACTTA+TGG - Chr2:15290993-15291012 MsG0280007429.01.T01:intron 45.0%
CAAGGACCAACTAACCCAAA+GGG + Chr2:15287674-15287693 None:intergenic 45.0%
CATGTGTAGCAGTGAGAAGT+AGG + Chr2:15288664-15288683 None:intergenic 45.0%
CCAGGGTTCCAAATACTAGA+AGG - Chr2:15290533-15290552 MsG0280007429.01.T01:intron 45.0%
CCATTTCCAAAGGAGATGTG+CGG - Chr2:15288065-15288084 MsG0280007429.01.T01:intron 45.0%
CGACTAGTGCTTGGGAAAAA+GGG - Chr2:15287083-15287102 MsG0280007429.01.T01:three_prime_UTR 45.0%
CTCATACACCCTCATTGTAG+AGG + Chr2:15291287-15291306 None:intergenic 45.0%
CTTGTCACTACAGTCCTTGA+AGG - Chr2:15287748-15287767 MsG0280007429.01.T01:intron 45.0%
GACGTAGAGGAAGACGATAA+CGG + Chr2:15286937-15286956 None:intergenic 45.0%
GACTAGTGCTTGGGAAAAAG+GGG - Chr2:15287084-15287103 MsG0280007429.01.T01:three_prime_UTR 45.0%
GCACGAATTGAAAGACGTAG+AGG + Chr2:15286950-15286969 None:intergenic 45.0%
GGGAACTATGAGAATGAGAC+TGG + Chr2:15288117-15288136 None:intergenic 45.0%
TATGGTTGCAGGAACTTGGA+GGG - Chr2:15289389-15289408 MsG0280007429.01.T01:intron 45.0%
TCGACTAGTGCTTGGGAAAA+AGG - Chr2:15287082-15287101 MsG0280007429.01.T01:three_prime_UTR 45.0%
TCTGCCATACTTCAGCCTAA+CGG + Chr2:15290062-15290081 None:intergenic 45.0%
TGAGGGCTTGCCAAACTTAT+GGG - Chr2:15290994-15291013 MsG0280007429.01.T01:intron 45.0%
TGTCAAGCGTTAAACCGACT+TGG - Chr2:15287547-15287566 MsG0280007429.01.T01:intron 45.0%
TTCCGGCGACTATTAGTACT+TGG + Chr2:15286673-15286692 None:intergenic 45.0%
TTTGGTCTAACATGGTCTGG+CGG - Chr2:15288453-15288472 MsG0280007429.01.T01:intron 45.0%
! ACACTTCATCGACTAGTGCT+TGG - Chr2:15287074-15287093 MsG0280007429.01.T01:three_prime_UTR 45.0%
! CACTTCATCGACTAGTGCTT+GGG - Chr2:15287075-15287094 MsG0280007429.01.T01:three_prime_UTR 45.0%
! CCTTCTAGTATTTGGAACCC+TGG + Chr2:15290536-15290555 None:intergenic 45.0%
! CGCACATCTCCTTTGGAAAT+GGG + Chr2:15288067-15288086 None:intergenic 45.0%
! GTCAAGCGTTAAACCGACTT+GGG - Chr2:15287548-15287567 MsG0280007429.01.T01:intron 45.0%
! TCTAGTATTTGGAACCCTGG+AGG + Chr2:15290533-15290552 None:intergenic 45.0%
!! ATGTTTGGTGGTGGAAATGG+TGG + Chr2:15286821-15286840 None:intergenic 45.0%
!! ATTTTCATTGCAAGGGGTGC+AGG - Chr2:15290635-15290654 MsG0280007429.01.T01:intron 45.0%
!! GATTTGTTGAGGTGTGAGGT+TGG + Chr2:15286881-15286900 None:intergenic 45.0%
!! GGAAGACGATAACGGATTTG+AGG + Chr2:15286929-15286948 None:intergenic 45.0%
!! GTTGAGTTGATCCACCTTGT+TGG + Chr2:15288212-15288231 None:intergenic 45.0%
!! TGGTTTGGTCTAACATGGTC+TGG - Chr2:15288450-15288469 MsG0280007429.01.T01:intron 45.0%
!! TTTTCATTGCAAGGGGTGCA+GGG - Chr2:15290636-15290655 MsG0280007429.01.T01:intron 45.0%
!!! TGGCGGGTTTTGTTGTAGTT+TGG + Chr2:15286708-15286727 None:intergenic 45.0%
!!! TTTTATTTTTTCATTTTTTT+TGG - Chr2:15288561-15288580 MsG0280007429.01.T01:intron 5.0%
AACTTGGAGGGAATGCTTGG+TGG - Chr2:15289401-15289420 MsG0280007429.01.T01:intron 50.0%
ACCGGAGGTTCCCATAAGTT+TGG + Chr2:15291007-15291026 None:intergenic 50.0%
ACGGTGGGATTTGACCCTTT+GGG - Chr2:15287657-15287676 MsG0280007429.01.T01:intron 50.0%
AGGAACTTGGAGGGAATGCT+TGG - Chr2:15289398-15289417 MsG0280007429.01.T01:intron 50.0%
CCAAGGACCAACTAACCCAA+AGG + Chr2:15287675-15287694 None:intergenic 50.0%
CTATGGTTGCAGGAACTTGG+AGG - Chr2:15289388-15289407 MsG0280007429.01.T01:intron 50.0%
CTGCATATGAATGAGGCGAC+CGG + Chr2:15291025-15291044 None:intergenic 50.0%
GCACAGTAGAGCTAGATTGC+AGG + Chr2:15288243-15288262 None:intergenic 50.0%
GCCAAACTTATGGGAACCTC+CGG - Chr2:15291003-15291022 MsG0280007429.01.T01:intron 50.0%
GGTCTATGGTTGCAGGAACT+TGG - Chr2:15289385-15289404 MsG0280007429.01.T01:intron 50.0%
TAGCATTCCAACCTGCTGCT+TGG - Chr2:15289745-15289764 MsG0280007429.01.T01:intron 50.0%
TAGCTGGGCTGAACAAGATC+TGG + Chr2:15291455-15291474 None:intergenic 50.0%
TCAAATCCCACCGTCCACTT+GGG + Chr2:15287651-15287670 None:intergenic 50.0%
TCCACCACCAAACATCATGG+CGG - Chr2:15286826-15286845 MsG0280007429.01.T01:three_prime_UTR 50.0%
TGCAACAGAAGGCTTCACTG+TGG - Chr2:15287986-15288005 MsG0280007429.01.T01:intron 50.0%
! AAGCAGCAGGTTGGAATGCT+AGG + Chr2:15289746-15289765 None:intergenic 50.0%
! AAGTGCATTTTGCCGAGAGC+TGG - Chr2:15288992-15289011 MsG0280007429.01.T01:intron 50.0%
! CCGCACATCTCCTTTGGAAA+TGG + Chr2:15288068-15288087 None:intergenic 50.0%
! GGAATGCTTGGTGGTTTGAC+CGG - Chr2:15289410-15289429 MsG0280007429.01.T01:intron 50.0%
!! AAACCGACTTGGGTTGGCTT+GGG - Chr2:15287558-15287577 MsG0280007429.01.T01:intron 50.0%
!! AGCGTTAAACCGACTTGGGT+TGG - Chr2:15287552-15287571 MsG0280007429.01.T01:intron 50.0%
!! CCTTTGGGTTAGTTGGTCCT+TGG - Chr2:15287672-15287691 MsG0280007429.01.T01:intron 50.0%
!! GAAAAAAATGCCGGCTCCTG+AGG - Chr2:15290367-15290386 MsG0280007429.01.T01:intron 50.0%
!! TAAACCGACTTGGGTTGGCT+TGG - Chr2:15287557-15287576 MsG0280007429.01.T01:intron 50.0%
!!! TTTTGGTTGGTGGAGACGAG+CGG - Chr2:15288960-15288979 MsG0280007429.01.T01:intron 50.0%
AAATCCCACCGTCCACTTGG+GGG + Chr2:15287649-15287668 None:intergenic 55.0%
ACCAAACATCATGGCGGCGA+CGG - Chr2:15286832-15286851 MsG0280007429.01.T01:three_prime_UTR 55.0%
ATCAGTTGTGGGGAGCCGTT+AGG - Chr2:15290044-15290063 MsG0280007429.01.T01:intron 55.0%
CAAATCCCACCGTCCACTTG+GGG + Chr2:15287650-15287669 None:intergenic 55.0%
CATATGAATGAGGCGACCGG+AGG + Chr2:15291022-15291041 None:intergenic 55.0%
CTCAGGGCAGCGTTTGTGTT+GGG + Chr2:15288137-15288156 None:intergenic 55.0%
CTTGGAGTATGCTCCTCTCG+AGG - Chr2:15287583-15287602 MsG0280007429.01.T01:intron 55.0%
GACGGTGGGATTTGACCCTT+TGG - Chr2:15287656-15287675 MsG0280007429.01.T01:intron 55.0%
GGAGCCGTTAGGCTGAAGTA+TGG - Chr2:15290055-15290074 MsG0280007429.01.T01:intron 55.0%
GTATGCTCCTCTCGAGGCTT+AGG - Chr2:15287589-15287608 MsG0280007429.01.T01:intron 55.0%
GTCAAATCCCACCGTCCACT+TGG + Chr2:15287652-15287671 None:intergenic 55.0%
TAACATGGTCTGGCGGCATC+TGG - Chr2:15288460-15288479 MsG0280007429.01.T01:intron 55.0%
TGAAGAGCCAAGCAGCAGGT+TGG + Chr2:15289755-15289774 None:intergenic 55.0%
TTCACAGCAACCTCAGGAGC+CGG + Chr2:15290380-15290399 None:intergenic 55.0%
! CTCGAGAGGAGCATACTCCA+AGG + Chr2:15287585-15287604 None:intergenic 55.0%
AATCCCACCGTCCACTTGGG+GGG + Chr2:15287648-15287667 None:intergenic 60.0%
GCTCAGGGCAGCGTTTGTGT+TGG + Chr2:15288138-15288157 None:intergenic 60.0%
GGTCCCAAGCCAACCCAAGT+CGG + Chr2:15287564-15287583 None:intergenic 60.0%
GTCGCCGCCATGATGTTTGG+TGG + Chr2:15286833-15286852 None:intergenic 60.0%
TCTGGCGGCATCTGGTCTGA+TGG - Chr2:15288468-15288487 MsG0280007429.01.T01:intron 60.0%
TTAAATCCCCCCCCCCCAAG+TGG - Chr2:15287634-15287653 MsG0280007429.01.T01:intron 60.0%
! GCCGCCATGATGTTTGGTGG+TGG + Chr2:15286830-15286849 None:intergenic 60.0%
!! CTTGGGTTGGCTTGGGACCT+TGG - Chr2:15287565-15287584 MsG0280007429.01.T01:intron 60.0%
ATCCCACCGTCCACTTGGGG+GGG + Chr2:15287647-15287666 None:intergenic 65.0%
GCCGTCGCCGCCATGATGTT+TGG + Chr2:15286836-15286855 None:intergenic 65.0%
ATCCCCCCCCCCCAAGTGGA+CGG - Chr2:15287638-15287657 MsG0280007429.01.T01:intron 70.0%
TCCCACCGTCCACTTGGGGG+GGG + Chr2:15287646-15287665 None:intergenic 70.0%
CACCGTCCACTTGGGGGGGG+GGG + Chr2:15287643-15287662 None:intergenic 75.0%
CCACCGTCCACTTGGGGGGG+GGG + Chr2:15287644-15287663 None:intergenic 75.0%
CCCACCGTCCACTTGGGGGG+GGG + Chr2:15287645-15287664 None:intergenic 75.0%
CCCCCCCCCAAGTGGACGGT+GGG - Chr2:15287642-15287661 MsG0280007429.01.T01:intron 75.0%
! CCCCCCCCCCAAGTGGACGG+TGG - Chr2:15287641-15287660 MsG0280007429.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr2 gene 15286633 15291562 15286633 ID=MsG0280007429.01;Name=MsG0280007429.01
Chr2 mRNA 15286633 15291562 15286633 ID=MsG0280007429.01.T01;Parent=MsG0280007429.01;Name=MsG0280007429.01.T01;_AED=0.38;_eAED=0.41;_QI=209|0.57|0.87|1|0.85|0.75|8|767|207
Chr2 exon 15286633 15286768 15286633 ID=MsG0280007429.01.T01:exon:3302;Parent=MsG0280007429.01.T01
Chr2 exon 15286794 15287261 15286794 ID=MsG0280007429.01.T01:exon:3301;Parent=MsG0280007429.01.T01
Chr2 exon 15287764 15287835 15287764 ID=MsG0280007429.01.T01:exon:3300;Parent=MsG0280007429.01.T01
Chr2 exon 15288279 15288371 15288279 ID=MsG0280007429.01.T01:exon:3299;Parent=MsG0280007429.01.T01
Chr2 exon 15288687 15288795 15288687 ID=MsG0280007429.01.T01:exon:3298;Parent=MsG0280007429.01.T01
Chr2 exon 15289151 15289266 15289151 ID=MsG0280007429.01.T01:exon:3297;Parent=MsG0280007429.01.T01
Chr2 exon 15290872 15290965 15290872 ID=MsG0280007429.01.T01:exon:3296;Parent=MsG0280007429.01.T01
Chr2 exon 15291051 15291562 15291051 ID=MsG0280007429.01.T01:exon:3295;Parent=MsG0280007429.01.T01
Chr2 five_prime_UTR 15291354 15291562 15291354 ID=MsG0280007429.01.T01:five_prime_utr;Parent=MsG0280007429.01.T01
Chr2 CDS 15291051 15291353 15291051 ID=MsG0280007429.01.T01:cds;Parent=MsG0280007429.01.T01
Chr2 CDS 15290872 15290965 15290872 ID=MsG0280007429.01.T01:cds;Parent=MsG0280007429.01.T01
Chr2 CDS 15289151 15289266 15289151 ID=MsG0280007429.01.T01:cds;Parent=MsG0280007429.01.T01
Chr2 CDS 15288687 15288795 15288687 ID=MsG0280007429.01.T01:cds;Parent=MsG0280007429.01.T01
Chr2 CDS 15288370 15288371 15288370 ID=MsG0280007429.01.T01:cds;Parent=MsG0280007429.01.T01
Chr2 three_prime_UTR 15288279 15288369 15288279 ID=MsG0280007429.01.T01:three_prime_utr;Parent=MsG0280007429.01.T01
Chr2 three_prime_UTR 15287764 15287835 15287764 ID=MsG0280007429.01.T01:three_prime_utr;Parent=MsG0280007429.01.T01
Chr2 three_prime_UTR 15286794 15287261 15286794 ID=MsG0280007429.01.T01:three_prime_utr;Parent=MsG0280007429.01.T01
Chr2 three_prime_UTR 15286633 15286768 15286633 ID=MsG0280007429.01.T01:three_prime_utr;Parent=MsG0280007429.01.T01
Gene Sequence

>MsG0280007429.01.T01

ATGGCGGCGACGGCGATGTTTTCTTCTTCGCTCTTTCCAACCTCACACCTCAACAAATCATCATCATCATCTTCTTCAAAATTCCCTCAAATCCGTTATCGTCTTCCTCTACGTCTTTCAATTCGTGCATCTCTGTTACAAGATAAAGAAGATAAAGTTGTTTTACAAGACTCTTTCCCTTCTAAAACCTCTCCTTTAGATTCCGTTACTGAAAATTCAACTAATGACGATGACACTTCATCGACTAGTGCTTGGGAAAAAGGGGTTATTAAAGTTGAACAATCCGTTAATATCTTTCTCACGGATTCTGTGATTAAGATACTTGATGCTCTTTATCGTGATAGAAATTATGCAAGGTTTTTTGTGCTTGAAACTATTGCAAGAGTCCCTTATTTTGCCTTTATGTCAATTCTCCACATGTATGAGAGTTTTGGTTGGTGGAGACGAGCGGATTATCTGAAAGTGCATTTTGCCGAGAGCTGGAATGAAATGCATCATTTGCTCATTATGGAAGAACTTGGAGGGAATGCTTGGTGGTTTGACCGGTTTCTTGCTCAACATATTGCAATATTTTATTACTTCATGACAGCTTTAATGTATTTAATAAGCCCAAGAATGGCATAA
Protein sequence

>MsG0280007429.01.T01

MAATAMFSSSLFPTSHLNKSSSSSSSKFPQIRYRLPLRLSIRASLLQDKEDKVVLQDSFPSKTSPLDSVTENSTNDDDTSSTSAWEKGVIKVEQSVNIFLTDSVIKILDALYRDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAWWFDRFLAQHIAIFYYFMTALMYLISPRMA*