Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880042794.01.T01 | RHN39523.1 | 82.16 | 213 | 2 | 1 | 1 | 177 | 1 | 213 | 1.81E-117 | 342 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880042794.01.T01 | Q72GN6 | 29.605 | 152 | 97 | 4 | 9 | 157 | 2 | 146 | 4.09E-16 | 77.8 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880042794.01.T01 | A0A396GFR7 | 82.160 | 213 | 2 | 1 | 1 | 177 | 1 | 213 | 8.67e-118 | 342 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180000151.01 | MsG0880042794.01 | 0.817886 | 2.612560e-52 | 1.926138e-49 |
MsG0180000160.01 | MsG0880042794.01 | 0.854680 | 1.047235e-61 | 2.357680e-58 |
MsG0180000546.01 | MsG0880042794.01 | 0.893002 | 9.422892e-75 | 8.818873e-71 |
MsG0180000669.01 | MsG0880042794.01 | 0.825845 | 3.753665e-54 | 3.461588e-51 |
MsG0180004025.01 | MsG0880042794.01 | 0.852297 | 5.062038e-61 | 1.053098e-57 |
MsG0180005052.01 | MsG0880042794.01 | 0.827152 | 1.831752e-54 | 1.753652e-51 |
MsG0180005270.01 | MsG0880042794.01 | 0.803173 | 3.956015e-49 | 1.974512e-46 |
MsG0180005686.01 | MsG0880042794.01 | 0.857561 | 1.501398e-62 | 3.721023e-59 |
MsG0180005881.01 | MsG0880042794.01 | -0.838644 | 2.544808e-57 | 3.430150e-54 |
MsG0180006220.01 | MsG0880042794.01 | 0.849335 | 3.453919e-60 | 6.526729e-57 |
MsG0780040626.01 | MsG0880042794.01 | 0.813413 | 2.592428e-51 | 1.691870e-48 |
MsG0780040794.01 | MsG0880042794.01 | 0.856523 | 3.037406e-62 | 7.271433e-59 |
MsG0780041015.01 | MsG0880042794.01 | -0.847572 | 1.062379e-59 | 1.896434e-56 |
MsG0780041507.01 | MsG0880042794.01 | 0.814418 | 1.556506e-51 | 1.043884e-48 |
MsG0780041747.01 | MsG0880042794.01 | 0.811609 | 6.427713e-51 | 3.996601e-48 |
MsG0880042794.01 | MsG0880042948.01 | 0.857808 | 1.268115e-62 | 3.168597e-59 |
MsG0880042794.01 | MsG0880043829.01 | 0.832335 | 1.002694e-55 | 1.117152e-52 |
MsG0880042794.01 | MsG0880046072.01 | 0.823276 | 1.511513e-53 | 1.295502e-50 |
MsG0880042794.01 | MsG0880046880.01 | 0.841511 | 4.544687e-58 | 6.693305e-55 |
MsG0880042794.01 | MsG0880046930.01 | 0.838306 | 3.109231e-57 | 4.147419e-54 |
MsG0280010908.01 | MsG0880042794.01 | -0.816531 | 5.270464e-52 | 3.744042e-49 |
MsG0280011376.01 | MsG0880042794.01 | 0.864351 | 1.294439e-64 | 4.051749e-61 |
MsG0380011895.01 | MsG0880042794.01 | 0.841597 | 4.314522e-58 | 6.371426e-55 |
MsG0380012005.01 | MsG0880042794.01 | 0.804293 | 2.315682e-49 | 1.189543e-46 |
MsG0380012050.01 | MsG0880042794.01 | 0.802446 | 5.589706e-49 | 2.738692e-46 |
MsG0380013467.01 | MsG0880042794.01 | 0.838897 | 2.188791e-57 | 2.972784e-54 |
MsG0380013853.01 | MsG0880042794.01 | 0.851336 | 9.484714e-61 | 1.913617e-57 |
MsG0380014727.01 | MsG0880042794.01 | 0.836032 | 1.187036e-56 | 1.477679e-53 |
MsG0380014756.01 | MsG0880042794.01 | 0.847604 | 1.040741e-59 | 1.859719e-56 |
MsG0680031334.01 | MsG0880042794.01 | 0.813562 | 2.404129e-51 | 1.575251e-48 |
MsG0680032460.01 | MsG0880042794.01 | -0.810672 | 1.025886e-50 | 6.222899e-48 |
MsG0680032516.01 | MsG0880042794.01 | 0.824358 | 8.428170e-54 | 7.448039e-51 |
MsG0480018606.01 | MsG0880042794.01 | 0.820907 | 5.352938e-53 | 4.291154e-50 |
MsG0480019126.01 | MsG0880042794.01 | 0.811632 | 6.352102e-51 | 3.951992e-48 |
MsG0480019384.01 | MsG0880042794.01 | 0.825885 | 3.672968e-54 | 3.390938e-51 |
MsG0480019546.01 | MsG0880042794.01 | 0.803259 | 3.797547e-49 | 1.899560e-46 |
MsG0480019547.01 | MsG0880042794.01 | 0.831715 | 1.426727e-55 | 1.561210e-52 |
MsG0480022243.01 | MsG0880042794.01 | 0.805901 | 1.067284e-49 | 5.714090e-47 |
MsG0480022245.01 | MsG0880042794.01 | 0.849931 | 2.354837e-60 | 4.537096e-57 |
MsG0480022535.01 | MsG0880042794.01 | 0.847320 | 1.245903e-59 | 2.205876e-56 |
MsG0480022739.01 | MsG0880042794.01 | -0.834566 | 2.784129e-56 | 3.316827e-53 |
MsG0480022933.01 | MsG0880042794.01 | 0.812978 | 3.229069e-51 | 2.082517e-48 |
MsG0580024491.01 | MsG0880042794.01 | -0.812949 | 3.277242e-51 | 2.111878e-48 |
MsG0580024494.01 | MsG0880042794.01 | 0.801822 | 7.511589e-49 | 3.622295e-46 |
MsG0580024495.01 | MsG0880042794.01 | 0.804074 | 2.572211e-49 | 1.313950e-46 |
MsG0580024597.01 | MsG0880042794.01 | 0.863218 | 2.911653e-64 | 8.760714e-61 |
MsG0580024598.01 | MsG0880042794.01 | 0.804980 | 1.665079e-49 | 8.706256e-47 |
MsG0580024601.01 | MsG0880042794.01 | 0.805053 | 1.607295e-49 | 8.419820e-47 |
MsG0580024805.01 | MsG0880042794.01 | 0.827083 | 1.902800e-54 | 1.818114e-51 |
MsG0580025826.01 | MsG0880042794.01 | 0.853550 | 2.219470e-61 | 4.813708e-58 |
MsG0580026032.01 | MsG0880042794.01 | 0.805267 | 1.449983e-49 | 7.637233e-47 |
MsG0380015533.01 | MsG0880042794.01 | 0.825005 | 5.933896e-54 | 5.342868e-51 |
MsG0380015810.01 | MsG0880042794.01 | 0.820068 | 8.339678e-53 | 6.531949e-50 |
MsG0380016182.01 | MsG0880042794.01 | 0.851327 | 9.541296e-61 | 1.924478e-57 |
MsG0380016191.01 | MsG0880042794.01 | -0.808133 | 3.597016e-50 | 2.040257e-47 |
MsG0380016516.01 | MsG0880042794.01 | 0.820295 | 7.398914e-53 | 5.831103e-50 |
MsG0380016740.01 | MsG0880042794.01 | 0.815878 | 7.378328e-52 | 5.148428e-49 |
MsG0380017022.01 | MsG0880042794.01 | 0.825377 | 4.846714e-54 | 4.409879e-51 |
MsG0380017023.01 | MsG0880042794.01 | 0.842029 | 3.318331e-58 | 4.966706e-55 |
MsG0380017085.01 | MsG0880042794.01 | 0.832256 | 1.048863e-55 | 1.165895e-52 |
MsG0380017126.01 | MsG0880042794.01 | 0.816478 | 5.416197e-52 | 3.841955e-49 |
MsG0380017322.01 | MsG0880042794.01 | 0.801842 | 7.439578e-49 | 3.589473e-46 |
MsG0380017791.01 | MsG0880042794.01 | 0.841582 | 4.354285e-58 | 6.426977e-55 |
MsG0380017941.01 | MsG0880042794.01 | 0.809178 | 2.150882e-50 | 1.254152e-47 |
MsG0580029355.01 | MsG0880042794.01 | 0.839094 | 1.945909e-57 | 2.659086e-54 |
MsG0580029429.01 | MsG0880042794.01 | 0.859344 | 4.414241e-63 | 1.162146e-59 |
MsG0680030636.01 | MsG0880042794.01 | 0.866829 | 2.141042e-65 | 7.317392e-62 |
MsG0280007429.01 | MsG0880042794.01 | 0.854874 | 9.200501e-62 | 2.084709e-58 |
MsG0780037082.01 | MsG0880042794.01 | 0.840380 | 9.002796e-58 | 1.280153e-54 |
MsG0780037105.01 | MsG0880042794.01 | 0.859197 | 4.886031e-63 | 1.279751e-59 |
MsG0780038833.01 | MsG0880042794.01 | 0.807602 | 4.666089e-50 | 2.609882e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880042794.01.T01 | MTR_8g022310 | 98.710 | 155 | 2 | 0 | 1 | 155 | 1 | 155 | 1.18e-110 | 313 |
MsG0880042794.01.T01 | MTR_8g022310 | 98.710 | 155 | 2 | 0 | 1 | 155 | 1 | 155 | 1.64e-110 | 313 |
MsG0880042794.01.T01 | MTR_8g022310 | 98.710 | 155 | 2 | 0 | 1 | 155 | 1 | 155 | 3.10e-110 | 314 |
MsG0880042794.01.T01 | MTR_8g022310 | 98.710 | 155 | 2 | 0 | 1 | 155 | 1 | 155 | 3.22e-110 | 313 |
MsG0880042794.01.T01 | MTR_8g022310 | 97.500 | 80 | 2 | 0 | 76 | 155 | 1 | 80 | 4.65e-50 | 158 |
MsG0880042794.01.T01 | MTR_8g022310 | 96.970 | 66 | 2 | 0 | 90 | 155 | 7 | 72 | 9.91e-39 | 130 |
MsG0880042794.01.T01 | MTR_7g112360 | 40.667 | 150 | 82 | 4 | 11 | 159 | 17 | 160 | 4.55e-31 | 110 |
MsG0880042794.01.T01 | MTR_4g085070 | 43.571 | 140 | 72 | 4 | 3 | 138 | 5 | 141 | 6.19e-28 | 102 |
MsG0880042794.01.T01 | MTR_7g112360 | 51.899 | 79 | 36 | 1 | 11 | 89 | 17 | 93 | 5.64e-24 | 91.3 |
MsG0880042794.01.T01 | MTR_7g101070 | 49.333 | 75 | 33 | 1 | 6 | 80 | 354 | 423 | 3.87e-16 | 75.5 |
MsG0880042794.01.T01 | MTR_2g014480 | 45.122 | 82 | 38 | 2 | 10 | 91 | 4 | 78 | 6.91e-16 | 74.3 |
MsG0880042794.01.T01 | MTR_2g090705 | 49.275 | 69 | 30 | 1 | 10 | 78 | 4 | 67 | 1.57e-15 | 73.2 |
MsG0880042794.01.T01 | MTR_4g109510 | 52.941 | 68 | 30 | 1 | 11 | 78 | 9 | 74 | 7.78e-15 | 72.0 |
MsG0880042794.01.T01 | MTR_4g015840 | 46.377 | 69 | 32 | 1 | 10 | 78 | 4 | 67 | 1.45e-14 | 70.5 |
MsG0880042794.01.T01 | MTR_2g014470 | 43.478 | 69 | 34 | 1 | 10 | 78 | 4 | 67 | 2.29e-14 | 70.1 |
MsG0880042794.01.T01 | MTR_4g078850 | 44.928 | 69 | 33 | 1 | 10 | 78 | 4 | 67 | 3.15e-14 | 69.7 |
MsG0880042794.01.T01 | MTR_7g092380 | 44.048 | 84 | 40 | 2 | 4 | 86 | 16 | 93 | 8.03e-14 | 68.2 |
MsG0880042794.01.T01 | MTR_2g436580 | 45.000 | 80 | 37 | 2 | 9 | 88 | 109 | 181 | 8.96e-14 | 67.4 |
MsG0880042794.01.T01 | MTR_3g108020 | 43.478 | 69 | 34 | 1 | 10 | 78 | 4 | 67 | 1.10e-13 | 68.2 |
MsG0880042794.01.T01 | MTR_5g065860 | 38.947 | 95 | 43 | 3 | 7 | 97 | 45 | 128 | 1.34e-13 | 65.1 |
MsG0880042794.01.T01 | MTR_7g109340 | 50.000 | 68 | 28 | 2 | 11 | 78 | 27 | 88 | 8.95e-13 | 65.5 |
MsG0880042794.01.T01 | MTR_1g110310 | 41.026 | 78 | 40 | 1 | 9 | 86 | 15 | 86 | 1.06e-12 | 65.5 |
MsG0880042794.01.T01 | MTR_1g052110 | 42.500 | 80 | 39 | 2 | 8 | 86 | 36 | 109 | 2.81e-12 | 63.9 |
MsG0880042794.01.T01 | MTR_6g027110 | 47.143 | 70 | 34 | 2 | 10 | 78 | 2 | 69 | 3.01e-12 | 61.6 |
MsG0880042794.01.T01 | MTR_5g012530 | 42.857 | 70 | 37 | 1 | 10 | 79 | 12 | 78 | 3.98e-12 | 63.9 |
MsG0880042794.01.T01 | MTR_8g081620 | 44.118 | 68 | 34 | 1 | 11 | 78 | 61 | 124 | 4.15e-12 | 62.0 |
MsG0880042794.01.T01 | MTR_6g027030 | 47.143 | 70 | 34 | 2 | 10 | 78 | 2 | 69 | 1.30e-11 | 61.2 |
MsG0880042794.01.T01 | MTR_3g087030 | 44.928 | 69 | 31 | 1 | 10 | 78 | 82 | 143 | 1.31e-11 | 62.4 |
MsG0880042794.01.T01 | MTR_2g436560 | 41.250 | 80 | 40 | 2 | 1 | 80 | 95 | 167 | 1.38e-11 | 62.4 |
MsG0880042794.01.T01 | MTR_6g026940 | 48.485 | 66 | 31 | 2 | 10 | 74 | 2 | 65 | 1.60e-11 | 60.5 |
MsG0880042794.01.T01 | MTR_3g027580 | 46.429 | 84 | 38 | 2 | 8 | 90 | 87 | 164 | 2.36e-11 | 61.6 |
MsG0880042794.01.T01 | MTR_7g069480 | 42.466 | 73 | 35 | 1 | 7 | 79 | 24 | 89 | 3.85e-11 | 61.2 |
MsG0880042794.01.T01 | MTR_5g037880 | 38.356 | 73 | 43 | 1 | 8 | 78 | 3 | 75 | 5.01e-11 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880042794.01.T01 | AT3G14200 | 72.358 | 123 | 28 | 3 | 10 | 129 | 12 | 131 | 6.53e-58 | 181 |
MsG0880042794.01.T01 | AT1G72416 | 65.049 | 103 | 23 | 2 | 10 | 107 | 5 | 99 | 1.84e-40 | 135 |
MsG0880042794.01.T01 | AT1G72416 | 63.810 | 105 | 25 | 2 | 10 | 109 | 5 | 101 | 2.00e-40 | 135 |
MsG0880042794.01.T01 | AT1G72416 | 65.049 | 103 | 23 | 2 | 10 | 107 | 5 | 99 | 3.46e-40 | 135 |
MsG0880042794.01.T01 | AT1G72416 | 65.049 | 103 | 23 | 2 | 10 | 107 | 5 | 99 | 5.31e-40 | 135 |
MsG0880042794.01.T01 | AT1G56300 | 49.624 | 133 | 58 | 4 | 1 | 129 | 1 | 128 | 1.48e-33 | 117 |
MsG0880042794.01.T01 | AT1G71000 | 44.048 | 168 | 72 | 7 | 4 | 163 | 2 | 155 | 2.13e-33 | 117 |
MsG0880042794.01.T01 | AT1G71000 | 51.351 | 111 | 43 | 3 | 4 | 110 | 2 | 105 | 6.69e-29 | 105 |
MsG0880042794.01.T01 | AT1G56300 | 51.818 | 110 | 47 | 3 | 1 | 106 | 1 | 108 | 1.13e-28 | 103 |
MsG0880042794.01.T01 | AT1G72416 | 73.469 | 49 | 13 | 0 | 61 | 109 | 10 | 58 | 5.29e-19 | 79.7 |
MsG0880042794.01.T01 | AT5G01390 | 49.275 | 69 | 30 | 1 | 10 | 78 | 4 | 67 | 9.94e-16 | 72.8 |
MsG0880042794.01.T01 | AT5G01390 | 49.275 | 69 | 30 | 1 | 10 | 78 | 4 | 67 | 1.65e-15 | 72.8 |
MsG0880042794.01.T01 | AT1G59725 | 46.377 | 69 | 33 | 1 | 10 | 78 | 4 | 68 | 2.23e-15 | 72.8 |
MsG0880042794.01.T01 | AT5G01390 | 49.275 | 69 | 30 | 1 | 10 | 78 | 4 | 67 | 2.74e-15 | 72.8 |
MsG0880042794.01.T01 | AT5G49060 | 46.914 | 81 | 35 | 3 | 7 | 86 | 96 | 169 | 3.49e-15 | 72.4 |
MsG0880042794.01.T01 | AT5G49060 | 46.914 | 81 | 35 | 3 | 7 | 86 | 96 | 169 | 3.49e-15 | 72.4 |
MsG0880042794.01.T01 | AT5G01390 | 49.275 | 69 | 30 | 1 | 10 | 78 | 4 | 67 | 4.11e-15 | 70.9 |
MsG0880042794.01.T01 | AT5G03160 | 46.667 | 75 | 35 | 1 | 6 | 80 | 366 | 435 | 5.33e-15 | 72.4 |
MsG0880042794.01.T01 | AT5G25530 | 44.928 | 69 | 33 | 1 | 10 | 78 | 4 | 67 | 1.69e-14 | 70.5 |
MsG0880042794.01.T01 | AT4G28480 | 46.377 | 69 | 32 | 1 | 10 | 78 | 4 | 67 | 1.91e-14 | 70.1 |
MsG0880042794.01.T01 | AT3G08910 | 46.377 | 69 | 32 | 1 | 10 | 78 | 4 | 67 | 2.34e-14 | 70.1 |
MsG0880042794.01.T01 | AT4G28480 | 46.377 | 69 | 32 | 1 | 10 | 78 | 4 | 67 | 3.15e-14 | 69.7 |
MsG0880042794.01.T01 | AT3G47940 | 42.857 | 70 | 36 | 1 | 10 | 79 | 4 | 69 | 8.21e-14 | 68.6 |
MsG0880042794.01.T01 | AT1G10350 | 42.029 | 69 | 35 | 1 | 10 | 78 | 4 | 67 | 9.38e-14 | 68.6 |
MsG0880042794.01.T01 | AT2G35720 | 42.308 | 78 | 42 | 1 | 2 | 79 | 7 | 81 | 9.90e-14 | 68.6 |
MsG0880042794.01.T01 | AT5G16650 | 39.024 | 82 | 43 | 2 | 3 | 83 | 4 | 79 | 1.86e-13 | 64.3 |
MsG0880042794.01.T01 | AT2G20560 | 44.928 | 69 | 33 | 1 | 10 | 78 | 4 | 67 | 2.42e-13 | 67.4 |
MsG0880042794.01.T01 | AT5G16650 | 39.024 | 82 | 43 | 2 | 3 | 83 | 4 | 79 | 4.92e-13 | 64.3 |
MsG0880042794.01.T01 | AT3G12170 | 38.793 | 116 | 61 | 4 | 1 | 113 | 1 | 109 | 6.58e-13 | 65.5 |
MsG0880042794.01.T01 | AT2G33735 | 50.704 | 71 | 25 | 2 | 10 | 78 | 22 | 84 | 1.09e-12 | 62.0 |
MsG0880042794.01.T01 | AT2G33735 | 50.704 | 71 | 25 | 2 | 10 | 78 | 22 | 84 | 1.09e-12 | 62.0 |
MsG0880042794.01.T01 | AT3G12170 | 38.793 | 116 | 61 | 4 | 1 | 113 | 37 | 145 | 1.23e-12 | 65.1 |
MsG0880042794.01.T01 | AT4G39960 | 39.785 | 93 | 43 | 3 | 9 | 97 | 84 | 167 | 2.03e-12 | 64.7 |
MsG0880042794.01.T01 | AT4G39960 | 39.785 | 93 | 43 | 3 | 9 | 97 | 84 | 167 | 2.03e-12 | 64.7 |
MsG0880042794.01.T01 | AT5G06910 | 35.556 | 135 | 54 | 5 | 1 | 130 | 19 | 125 | 2.29e-12 | 63.9 |
MsG0880042794.01.T01 | AT5G25530 | 40.260 | 77 | 33 | 2 | 10 | 78 | 4 | 75 | 7.05e-12 | 63.2 |
MsG0880042794.01.T01 | AT1G80030 | 42.254 | 71 | 34 | 1 | 8 | 78 | 73 | 136 | 7.31e-12 | 63.2 |
MsG0880042794.01.T01 | AT1G80030 | 42.254 | 71 | 34 | 1 | 8 | 78 | 73 | 136 | 8.76e-12 | 63.2 |
MsG0880042794.01.T01 | AT1G80030 | 42.254 | 71 | 34 | 1 | 8 | 78 | 73 | 136 | 8.76e-12 | 63.2 |
MsG0880042794.01.T01 | AT1G80030 | 42.254 | 71 | 34 | 1 | 8 | 78 | 73 | 136 | 8.76e-12 | 63.2 |
MsG0880042794.01.T01 | AT3G62600 | 48.529 | 68 | 29 | 2 | 11 | 78 | 27 | 88 | 1.37e-11 | 62.4 |
MsG0880042794.01.T01 | AT5G48030 | 31.788 | 151 | 88 | 4 | 8 | 151 | 92 | 234 | 2.25e-11 | 62.0 |
MsG0880042794.01.T01 | AT2G22360 | 42.029 | 69 | 33 | 1 | 10 | 78 | 86 | 147 | 5.62e-11 | 60.8 |
MsG0880042794.01.T01 | AT2G41000 | 38.158 | 76 | 45 | 2 | 10 | 85 | 3 | 76 | 6.41e-11 | 58.9 |
MsG0880042794.01.T01 | AT1G74250 | 42.647 | 68 | 38 | 1 | 11 | 78 | 12 | 78 | 7.28e-11 | 60.5 |
Find 45 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTAGTTGGTTGTGAAAATT+TGG | 0.205516 | 8:-14134479 | MsG0880042794.01.T01:five_prime_UTR |
TGTTATTGTTGGAAATAATA+TGG | 0.247286 | 8:-14134454 | MsG0880042794.01.T01:exon |
CAATGATTTCTATGCAGTTT+TGG | 0.279803 | 8:-14134412 | MsG0880042794.01.T01:CDS |
CCAGATCGTTGTTCAGCTTC+AGG | 0.283002 | 8:-14134071 | MsG0880042794.01.T01:CDS |
GGCTCACATTTGATTTAGTT+TGG | 0.297419 | 8:+14132747 | None:intergenic |
CAAGCGGATATCGGATTAAA+TGG | 0.298600 | 8:-14132016 | MsG0880042794.01.T01:CDS |
AGCACCTCTCTTAATGCTTC+GGG | 0.329574 | 8:-14131992 | MsG0880042794.01.T01:CDS |
CTTCAACTTGGATGACAACT+TGG | 0.330506 | 8:+14134721 | None:intergenic |
CTAATGTTTCTTTGTATTGT+CGG | 0.332006 | 8:+14134547 | None:intergenic |
TTATATGTGATACAGGAAAA+TGG | 0.333099 | 8:-14132085 | MsG0880042794.01.T01:intron |
GTTTGATATTGATTGGTTCT+TGG | 0.333237 | 8:-14134525 | MsG0880042794.01.T01:five_prime_UTR |
AACATTAGTTTGATATTGAT+TGG | 0.335782 | 8:-14134532 | MsG0880042794.01.T01:five_prime_UTR |
GTTCTTGGAGAATTCTAGTT+TGG | 0.336191 | 8:-14134510 | MsG0880042794.01.T01:five_prime_UTR |
TATATAAAGTCTAGAATTAG+AGG | 0.347820 | 8:-14134853 | MsG0880042794.01.T01:five_prime_UTR |
GCAATTCAAGAAGCCTATTC+TGG | 0.348966 | 8:-14134008 | MsG0880042794.01.T01:intron |
AGAAGCTAAGAAGAAATTTC+AGG | 0.357982 | 8:-14134030 | MsG0880042794.01.T01:CDS |
TCATCTACTTTCATGACTTT+CGG | 0.362653 | 8:-14131959 | MsG0880042794.01.T01:intron |
GTTTGGTTGGTTGATCTAGT+TGG | 0.390684 | 8:-14134493 | MsG0880042794.01.T01:five_prime_UTR |
AAGCACCTCTCTTAATGCTT+CGG | 0.391365 | 8:-14131993 | MsG0880042794.01.T01:CDS |
GATATGTTTCAAGCGGATAT+CGG | 0.410739 | 8:-14132025 | MsG0880042794.01.T01:CDS |
AAAATTTGGATTGTTATTGT+TGG | 0.435217 | 8:-14134465 | MsG0880042794.01.T01:five_prime_UTR |
TTGGAGAATTCTAGTTTGGT+TGG | 0.446669 | 8:-14134506 | MsG0880042794.01.T01:five_prime_UTR |
CAGATCGTTGTTCAGCTTCA+GGG | 0.447334 | 8:-14134070 | MsG0880042794.01.T01:CDS |
TGCATGTAAATTACCAGAAT+AGG | 0.452286 | 8:+14133995 | None:intergenic |
AAATGGAGAGGAGAGCTTTG+AGG | 0.455188 | 8:-14132068 | MsG0880042794.01.T01:CDS |
CCTGAAGCTGAACAACGATC+TGG | 0.468892 | 8:+14134071 | None:intergenic |
GGGAGACTTTCTGAACGAAA+TGG | 0.482099 | 8:-14132783 | MsG0880042794.01.T01:CDS |
TTGGATGACAACTTGGGTTG+CGG | 0.483218 | 8:+14134728 | None:intergenic |
GGAAATAATATGGCTAATGA+AGG | 0.487826 | 8:-14134444 | MsG0880042794.01.T01:exon |
AATGCTCTGATTCAGAACTA+AGG | 0.513112 | 8:-14134377 | MsG0880042794.01.T01:CDS |
TTCAGGGAATGTGAAGTTTG+TGG | 0.516942 | 8:-14134054 | MsG0880042794.01.T01:CDS |
AGTCATGAAAGTAGATGAAG+TGG | 0.538936 | 8:+14131964 | None:intergenic |
TGCTTATAAGAAACTTGCAC+TGG | 0.543386 | 8:-14134352 | MsG0880042794.01.T01:intron |
TTCAACTTGGATGACAACTT+GGG | 0.545053 | 8:+14134722 | None:intergenic |
ATTATCATTACCAATGAATG+AGG | 0.552598 | 8:-14131309 | MsG0880042794.01.T01:CDS |
ATTAATATACAACTTCAACT+TGG | 0.554791 | 8:+14134709 | None:intergenic |
ATTTGATGATATGTTTCAAG+CGG | 0.571158 | 8:-14132032 | MsG0880042794.01.T01:CDS |
TTTAGACTAGATGGAATGAA+GGG | 0.573998 | 8:+14134791 | None:intergenic |
ACAAAACAATGGAGTATGTG+TGG | 0.600244 | 8:-14131284 | MsG0880042794.01.T01:CDS |
ATGTGTGGAGTATATAGAAG+TGG | 0.620610 | 8:-14131269 | MsG0880042794.01.T01:CDS |
TGAATGAGGATACAAAACAA+TGG | 0.645967 | 8:-14131295 | MsG0880042794.01.T01:CDS |
TGTGATACAGGAAAATGGAG+AGG | 0.651222 | 8:-14132080 | MsG0880042794.01.T01:intron |
AAGAGATTAATGTACGACGT+TGG | 0.670458 | 8:-14133831 | MsG0880042794.01.T01:CDS |
GCAACCCGAAGCATTAAGAG+AGG | 0.689028 | 8:+14131988 | None:intergenic |
AGGTCTCTAGAGTATTCATG+AGG | 0.690314 | 8:-14134833 | MsG0880042794.01.T01:five_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTGCAAAAATATTAAAT+AGG | + | Chr8:14133419-14133438 | None:intergenic | 10.0% |
!! | TATTGCAAAAATATTAAATA+GGG | + | Chr8:14133418-14133437 | None:intergenic | 10.0% |
!! | TATTTAAAAAATAATTCAAG+TGG | - | Chr8:14133751-14133770 | MsG0880042794.01.T01:intron | 10.0% |
!! | TTGATTATATGAAAAAAAAT+CGG | + | Chr8:14132952-14132971 | None:intergenic | 10.0% |
!!! | CAAAATATATATTTTTTTCA+TGG | - | Chr8:14131918-14131937 | MsG0880042794.01.T01:intron | 10.0% |
!!! | TTTATATATTTTTTGTTTAG+TGG | - | Chr8:14133515-14133534 | MsG0880042794.01.T01:intron | 10.0% |
!! | AAAACAAATAATTTGAATCA+TGG | + | Chr8:14132229-14132248 | None:intergenic | 15.0% |
!! | AGGAAAATAATTTGATTAAA+TGG | - | Chr8:14132034-14132053 | MsG0880042794.01.T01:CDS | 15.0% |
!! | TGATTATATGAAAAAAAATC+GGG | + | Chr8:14132951-14132970 | None:intergenic | 15.0% |
!!! | AACAAGATATTATTTTATTG+TGG | - | Chr8:14133791-14133810 | MsG0880042794.01.T01:intron | 15.0% |
!!! | CTTTAAATTATACAAGATTT+TGG | - | Chr8:14134507-14134526 | MsG0880042794.01.T01:five_prime_UTR | 15.0% |
!!! | TCTCAATCTATTTTTTAAAA+CGG | + | Chr8:14132659-14132678 | None:intergenic | 15.0% |
!!! | TGAATAAACTTTAGAAAAAA+CGG | + | Chr8:14131886-14131905 | None:intergenic | 15.0% |
!! | AAAGTGAAAAGGTAAAATTA+AGG | + | Chr8:14132488-14132507 | None:intergenic | 20.0% |
!! | AACAAGACATAAACATTATT+AGG | + | Chr8:14133617-14133636 | None:intergenic | 20.0% |
!! | AACGAAAACAAGAAAAAAAA+TGG | - | Chr8:14132740-14132759 | MsG0880042794.01.T01:intron | 20.0% |
!! | AATGAATTGAAAGAGTTAAA+AGG | + | Chr8:14134008-14134027 | None:intergenic | 20.0% |
!! | ATGAATATTGAAACTGAATT+AGG | - | Chr8:14132540-14132559 | MsG0880042794.01.T01:intron | 20.0% |
!! | ATTAATATACAACTTCAACT+TGG | + | Chr8:14131435-14131454 | None:intergenic | 20.0% |
!! | ATTCAGTTTCAATATTCATT+AGG | + | Chr8:14132539-14132558 | None:intergenic | 20.0% |
!! | ATTTGAAAATAATTGTTGGA+AGG | - | Chr8:14133829-14133848 | MsG0880042794.01.T01:CDS | 20.0% |
!! | CAAGATTTGAAAATAATTGT+TGG | - | Chr8:14133825-14133844 | MsG0880042794.01.T01:CDS | 20.0% |
!! | GATTAATTTATATGTGATAC+AGG | - | Chr8:14134049-14134068 | MsG0880042794.01.T01:CDS | 20.0% |
!! | TATCTTTCTTTCACAAATTT+AGG | + | Chr8:14131964-14131983 | None:intergenic | 20.0% |
!! | TGAATATTGAAACTGAATTA+GGG | - | Chr8:14132541-14132560 | MsG0880042794.01.T01:intron | 20.0% |
!! | TGTTATTGTTGGAAATAATA+TGG | - | Chr8:14131687-14131706 | MsG0880042794.01.T01:intron | 20.0% |
!! | TTAACATGTAATTGAGTTAT+GGG | - | Chr8:14134479-14134498 | MsG0880042794.01.T01:five_prime_UTR | 20.0% |
!! | TTATAGCACATCAAAATTAT+TGG | + | Chr8:14133306-14133325 | None:intergenic | 20.0% |
!! | TTTAACATGTAATTGAGTTA+TGG | - | Chr8:14134478-14134497 | MsG0880042794.01.T01:five_prime_UTR | 20.0% |
!!! | AAAATGAATTTTGTTTTGCA+GGG | - | Chr8:14133332-14133351 | MsG0880042794.01.T01:intron | 20.0% |
!!! | AAAATTTGGATTGTTATTGT+TGG | - | Chr8:14131676-14131695 | MsG0880042794.01.T01:intron | 20.0% |
!!! | AACATTAGTTTGATATTGAT+TGG | - | Chr8:14131609-14131628 | MsG0880042794.01.T01:intron | 20.0% |
!!! | AATAATGTTTATGTCTTGTT+TGG | - | Chr8:14133617-14133636 | MsG0880042794.01.T01:intron | 20.0% |
!!! | AATGTAAATGGTGTTTTTTT+TGG | - | Chr8:14132265-14132284 | MsG0880042794.01.T01:intron | 20.0% |
!!! | AATTTGTGTTTTATTTGGTT+TGG | - | Chr8:14131558-14131577 | MsG0880042794.01.T01:intron | 20.0% |
!!! | AGTTAAAAGGATTGAAATTT+TGG | + | Chr8:14133995-14134014 | None:intergenic | 20.0% |
!!! | ATGATAGAAGATTTAGAATT+TGG | - | Chr8:14134540-14134559 | MsG0880042794.01.T01:five_prime_UTR | 20.0% |
!!! | ATGGAAATGAGTTAATTTTT+AGG | - | Chr8:14132759-14132778 | MsG0880042794.01.T01:CDS | 20.0% |
!!! | ATGTAAATGGTGTTTTTTTT+GGG | - | Chr8:14132266-14132285 | MsG0880042794.01.T01:intron | 20.0% |
!!! | GTTTAAAATAGTGACTTAAT+TGG | + | Chr8:14132829-14132848 | None:intergenic | 20.0% |
!!! | GTTTCTTACTTTTTATGTTA+AGG | - | Chr8:14131528-14131547 | MsG0880042794.01.T01:intron | 20.0% |
!!! | TAATCAATTTATGAAAGTAC+AGG | + | Chr8:14133934-14133953 | None:intergenic | 20.0% |
!!! | TATATAAAGTCTAGAATTAG+AGG | - | Chr8:14131288-14131307 | MsG0880042794.01.T01:CDS | 20.0% |
!!! | TTTCTAAAGTTTATTCACAT+GGG | - | Chr8:14131889-14131908 | MsG0880042794.01.T01:intron | 20.0% |
!!! | TTTGTGAAAGAAAGATATTT+TGG | - | Chr8:14131967-14131986 | MsG0880042794.01.T01:CDS | 20.0% |
!!! | TTTTCTAAAGTTTATTCACA+TGG | - | Chr8:14131888-14131907 | MsG0880042794.01.T01:intron | 20.0% |
! | AAAAAGAGATATGTTCTTCA+AGG | - | Chr8:14133080-14133099 | MsG0880042794.01.T01:intron | 25.0% |
! | AAAGTTGGAATTGTTTAGAA+AGG | - | Chr8:14132014-14132033 | MsG0880042794.01.T01:CDS | 25.0% |
! | AACAATGATATGGTCAATTT+CGG | - | Chr8:14132714-14132733 | MsG0880042794.01.T01:intron | 25.0% |
! | AAGAGGAGAAGAAAAATAAT+TGG | + | Chr8:14133052-14133071 | None:intergenic | 25.0% |
! | AATTCTACTCAGATGATTAT+GGG | - | Chr8:14134230-14134249 | MsG0880042794.01.T01:intron | 25.0% |
! | AGTAGTAACAACAAAAAGAT+AGG | - | Chr8:14134455-14134474 | MsG0880042794.01.T01:exon | 25.0% |
! | ATTATCATTACCAATGAATG+AGG | - | Chr8:14134832-14134851 | MsG0880042794.01.T01:five_prime_UTR | 25.0% |
! | ATTCATGGAATTGAATCAAA+TGG | - | Chr8:14133265-14133284 | MsG0880042794.01.T01:intron | 25.0% |
! | CTAATGTTTCTTTGTATTGT+CGG | + | Chr8:14131597-14131616 | None:intergenic | 25.0% |
! | GATTCAATTCCATGAATTAT+TGG | + | Chr8:14133262-14133281 | None:intergenic | 25.0% |
! | TAACATGTAATTGAGTTATG+GGG | - | Chr8:14134480-14134499 | MsG0880042794.01.T01:five_prime_UTR | 25.0% |
! | TAATCTATCTTCAGAGTAAT+TGG | + | Chr8:14134707-14134726 | None:intergenic | 25.0% |
! | TGTTTCTTCATTTACTTGAA+GGG | - | Chr8:14132446-14132465 | MsG0880042794.01.T01:intron | 25.0% |
! | TTAAGTGGTTAAGGAAAAAA+TGG | - | Chr8:14134724-14134743 | MsG0880042794.01.T01:five_prime_UTR | 25.0% |
! | TTATATGTGATACAGGAAAA+TGG | - | Chr8:14134056-14134075 | MsG0880042794.01.T01:CDS | 25.0% |
! | TTGAATGATTGTTTATTGTG+AGG | - | Chr8:14134403-14134422 | MsG0880042794.01.T01:CDS | 25.0% |
! | TTGTTAATGTGAAAGTGAAA+AGG | + | Chr8:14132499-14132518 | None:intergenic | 25.0% |
! | TTTGATTAAATGGACAGAAA+TGG | - | Chr8:14132044-14132063 | MsG0880042794.01.T01:CDS | 25.0% |
!! | AATGATTTCTATGCAGTTTT+GGG | - | Chr8:14131730-14131749 | MsG0880042794.01.T01:intron | 25.0% |
!! | ATAAACTTTAGAAAAAACGG+TGG | + | Chr8:14131883-14131902 | None:intergenic | 25.0% |
!! | ATTGTTGTTATGATGAAAGT+TGG | - | Chr8:14131999-14132018 | MsG0880042794.01.T01:CDS | 25.0% |
!! | ATTTGATGATATGTTTCAAG+CGG | - | Chr8:14134109-14134128 | MsG0880042794.01.T01:intron | 25.0% |
!! | TATAAGGATGATTTGATAGT+TGG | - | Chr8:14132565-14132584 | MsG0880042794.01.T01:intron | 25.0% |
!! | TATTGGGTCTAAAATGTAAA+TGG | - | Chr8:14132253-14132272 | MsG0880042794.01.T01:intron | 25.0% |
!! | TTGTTTCTTCATTTACTTGA+AGG | - | Chr8:14132445-14132464 | MsG0880042794.01.T01:intron | 25.0% |
!!! | AACATTTTTTTTTCCTCCTT+TGG | + | Chr8:14133142-14133161 | None:intergenic | 25.0% |
!!! | ACATTTTTTTTTCCTCCTTT+GGG | + | Chr8:14133141-14133160 | None:intergenic | 25.0% |
!!! | AGTCACTATTTTAAACCTAA+AGG | - | Chr8:14132833-14132852 | MsG0880042794.01.T01:intron | 25.0% |
!!! | GAAAATGAATTTTGTTTTGC+AGG | - | Chr8:14133331-14133350 | MsG0880042794.01.T01:intron | 25.0% |
!!! | GTACGAATTTGTGTTTTATT+TGG | - | Chr8:14131553-14131572 | MsG0880042794.01.T01:intron | 25.0% |
!!! | TTTTGTTGTTCATGTTATCA+AGG | - | Chr8:14134797-14134816 | MsG0880042794.01.T01:five_prime_UTR | 25.0% |
!!! | TTTTGTTTGCTTGTAATTAG+TGG | - | Chr8:14133446-14133465 | MsG0880042794.01.T01:intron | 25.0% |
AGAAGCTAAGAAGAAATTTC+AGG | - | Chr8:14132111-14132130 | MsG0880042794.01.T01:intron | 30.0% | |
ATAACAATTCATGCTTCAGA+TGG | + | Chr8:14134667-14134686 | None:intergenic | 30.0% | |
ATAATTTGAATCATGGCTCA+TGG | + | Chr8:14132222-14132241 | None:intergenic | 30.0% | |
ATATGTTCTTCAAGGTTAGT+AGG | - | Chr8:14133088-14133107 | MsG0880042794.01.T01:intron | 30.0% | |
ATGAATGTTGCATCAAATGA+AGG | + | Chr8:14134342-14134361 | None:intergenic | 30.0% | |
CAATAAGAGCCAATAATTCA+TGG | - | Chr8:14133250-14133269 | MsG0880042794.01.T01:intron | 30.0% | |
CAATTCTACTCAGATGATTA+TGG | - | Chr8:14134229-14134248 | MsG0880042794.01.T01:intron | 30.0% | |
CCACTAATTAAAAGACTCAT+TGG | + | Chr8:14134772-14134791 | None:intergenic | 30.0% | |
GAAACTGAATTAGGGATATA+AGG | - | Chr8:14132549-14132568 | MsG0880042794.01.T01:intron | 30.0% | |
GAAGATAGATTAAGTGGTTA+AGG | - | Chr8:14134715-14134734 | MsG0880042794.01.T01:five_prime_UTR | 30.0% | |
GGAAATAATATGGCTAATGA+AGG | - | Chr8:14131697-14131716 | MsG0880042794.01.T01:intron | 30.0% | |
GGAGAAGAAAAATAATTGGA+CGG | + | Chr8:14133048-14133067 | None:intergenic | 30.0% | |
GTTTCAATATTCATTAGGCA+TGG | + | Chr8:14132534-14132553 | None:intergenic | 30.0% | |
TAATTGTTGGAAGGATAAAG+TGG | - | Chr8:14133838-14133857 | MsG0880042794.01.T01:CDS | 30.0% | |
TAATTTGAATCATGGCTCAT+GGG | + | Chr8:14132221-14132240 | None:intergenic | 30.0% | |
TCATCTACTTTCATGACTTT+CGG | - | Chr8:14134182-14134201 | MsG0880042794.01.T01:intron | 30.0% | |
TCTAGTTGGTTGTGAAAATT+TGG | - | Chr8:14131662-14131681 | MsG0880042794.01.T01:intron | 30.0% | |
TGAATGAGGATACAAAACAA+TGG | - | Chr8:14134846-14134865 | MsG0880042794.01.T01:five_prime_UTR | 30.0% | |
TGCATGTAAATTACCAGAAT+AGG | + | Chr8:14132149-14132168 | None:intergenic | 30.0% | |
TTCATTTGATGCAACATTCA+TGG | - | Chr8:14134341-14134360 | MsG0880042794.01.T01:intron | 30.0% | |
TTGAGAATGAATTTCTCTCT+TGG | - | Chr8:14132673-14132692 | MsG0880042794.01.T01:intron | 30.0% | |
TTTAGACTAGATGGAATGAA+GGG | + | Chr8:14131353-14131372 | None:intergenic | 30.0% | |
! | AAACAGAAGTTCTGGTAATT+TGG | + | Chr8:14134282-14134301 | None:intergenic | 30.0% |
! | AATTACCAGAACTTCTGTTT+TGG | - | Chr8:14134282-14134301 | MsG0880042794.01.T01:intron | 30.0% |
! | ATTACCAGAACTTCTGTTTT+GGG | - | Chr8:14134283-14134302 | MsG0880042794.01.T01:intron | 30.0% |
! | CAATGATTTCTATGCAGTTT+TGG | - | Chr8:14131729-14131748 | MsG0880042794.01.T01:intron | 30.0% |
! | GTTTGATATTGATTGGTTCT+TGG | - | Chr8:14131616-14131635 | MsG0880042794.01.T01:intron | 30.0% |
! | TACTCTGAAGATAGATTAAG+TGG | - | Chr8:14134709-14134728 | MsG0880042794.01.T01:five_prime_UTR | 30.0% |
! | TGTTTTGTATCCTCATTCAT+TGG | + | Chr8:14134845-14134864 | None:intergenic | 30.0% |
! | TTTTAGACTAGATGGAATGA+AGG | + | Chr8:14131354-14131373 | None:intergenic | 30.0% |
!! | CCAATGAGTCTTTTAATTAG+TGG | - | Chr8:14134769-14134788 | MsG0880042794.01.T01:five_prime_UTR | 30.0% |
!!! | AATTTTGTTTTGCAGGGTAT+GGG | - | Chr8:14133338-14133357 | MsG0880042794.01.T01:intron | 30.0% |
!!! | GCATTTTGTTTTAGACTAGA+TGG | + | Chr8:14131362-14131381 | None:intergenic | 30.0% |
AAGAGATTAATGTACGACGT+TGG | - | Chr8:14132310-14132329 | MsG0880042794.01.T01:intron | 35.0% | |
AATGCTCTGATTCAGAACTA+AGG | - | Chr8:14131764-14131783 | MsG0880042794.01.T01:intron | 35.0% | |
AATTAGTGGAACGTTAGGTT+AGG | - | Chr8:14133460-14133479 | MsG0880042794.01.T01:intron | 35.0% | |
ACAAAACAATGGAGTATGTG+TGG | - | Chr8:14134857-14134876 | MsG0880042794.01.T01:five_prime_UTR | 35.0% | |
ACACCAACTTTCATAGCAAT+TGG | + | Chr8:14133644-14133663 | None:intergenic | 35.0% | |
AGGCACAACTACATAGTATT+AGG | + | Chr8:14133573-14133592 | None:intergenic | 35.0% | |
AGTCATGAAAGTAGATGAAG+TGG | + | Chr8:14134180-14134199 | None:intergenic | 35.0% | |
ATGTGTGGAGTATATAGAAG+TGG | - | Chr8:14134872-14134891 | MsG0880042794.01.T01:five_prime_UTR | 35.0% | |
ATTTCACACCATTCATGAGT+TGG | - | Chr8:14132372-14132391 | MsG0880042794.01.T01:intron | 35.0% | |
CATGGAATTGAATCAAATGG+AGG | - | Chr8:14133268-14133287 | MsG0880042794.01.T01:intron | 35.0% | |
CTTGTAATTAGTGGAACGTT+AGG | - | Chr8:14133455-14133474 | MsG0880042794.01.T01:intron | 35.0% | |
GATATGTTTCAAGCGGATAT+CGG | - | Chr8:14134116-14134135 | MsG0880042794.01.T01:intron | 35.0% | |
GGCAAACATATAGCATAGTA+AGG | - | Chr8:14134362-14134381 | MsG0880042794.01.T01:CDS | 35.0% | |
GGTTAGAGTAGAAACAAAGA+CGG | + | Chr8:14131855-14131874 | None:intergenic | 35.0% | |
TATCTTCAGAGTAATTGGCA+AGG | + | Chr8:14134702-14134721 | None:intergenic | 35.0% | |
TATGTGTCACATAACACATG+TGG | - | Chr8:14133202-14133221 | MsG0880042794.01.T01:intron | 35.0% | |
TCACTGTCTTCTTTACCTTT+AGG | + | Chr8:14132851-14132870 | None:intergenic | 35.0% | |
TGCTTATAAGAAACTTGCAC+TGG | - | Chr8:14131789-14131808 | MsG0880042794.01.T01:intron | 35.0% | |
TGTTACTACTTACTACCCAT+AGG | + | Chr8:14134445-14134464 | None:intergenic | 35.0% | |
TTAAAGATCAGAGTGATGAG+CGG | - | Chr8:14132595-14132614 | MsG0880042794.01.T01:intron | 35.0% | |
TTCAACTTGGATGACAACTT+GGG | + | Chr8:14131422-14131441 | None:intergenic | 35.0% | |
TTGACCATATCATTGTTTCG+TGG | + | Chr8:14132711-14132730 | None:intergenic | 35.0% | |
TTTCACACCATTCATGAGTT+GGG | - | Chr8:14132373-14132392 | MsG0880042794.01.T01:intron | 35.0% | |
! | AACTTTAGAAAAAACGGTGG+AGG | + | Chr8:14131880-14131899 | None:intergenic | 35.0% |
! | AAGGATGATTTGATAGTTGG+TGG | - | Chr8:14132568-14132587 | MsG0880042794.01.T01:intron | 35.0% |
! | ACTTTAGAAAAAACGGTGGA+GGG | + | Chr8:14131879-14131898 | None:intergenic | 35.0% |
! | AGGATGATTTGATAGTTGGT+GGG | - | Chr8:14132569-14132588 | MsG0880042794.01.T01:intron | 35.0% |
! | AGTTGTGCCTTTTTACCTTT+TGG | - | Chr8:14133583-14133602 | MsG0880042794.01.T01:intron | 35.0% |
! | CTTTGGGAAAGACATTTGTT+GGG | + | Chr8:14133125-14133144 | None:intergenic | 35.0% |
! | GGCTCACATTTGATTTAGTT+TGG | + | Chr8:14133397-14133416 | None:intergenic | 35.0% |
! | GTTCTTGGAGAATTCTAGTT+TGG | - | Chr8:14131631-14131650 | MsG0880042794.01.T01:intron | 35.0% |
! | GTTGTGCCTTTTTACCTTTT+GGG | - | Chr8:14133584-14133603 | MsG0880042794.01.T01:intron | 35.0% |
! | TTACCAGAACTTCTGTTTTG+GGG | - | Chr8:14134284-14134303 | MsG0880042794.01.T01:intron | 35.0% |
! | TTTGGGAAAGACATTTGTTG+GGG | + | Chr8:14133124-14133143 | None:intergenic | 35.0% |
!! | AATTGCTATGAAAGTTGGTG+TGG | - | Chr8:14133643-14133662 | MsG0880042794.01.T01:intron | 35.0% |
!! | TTGGAGAATTCTAGTTTGGT+TGG | - | Chr8:14131635-14131654 | MsG0880042794.01.T01:intron | 35.0% |
!!! | CCTTTTTACCTTTTGGGATT+GGG | - | Chr8:14133590-14133609 | MsG0880042794.01.T01:intron | 35.0% |
!!! | GAATTTTGTTTTGCAGGGTA+TGG | - | Chr8:14133337-14133356 | MsG0880042794.01.T01:intron | 35.0% |
!!! | TCTCTTTTTTCACGTGAAAG+AGG | + | Chr8:14133069-14133088 | None:intergenic | 35.0% |
!!! | TGCAGTTTTGGGATTGAATA+AGG | - | Chr8:14131741-14131760 | MsG0880042794.01.T01:intron | 35.0% |
AAGCACCTCTCTTAATGCTT+CGG | - | Chr8:14134148-14134167 | MsG0880042794.01.T01:intron | 40.0% | |
ACAAATGTCTTTCCCAAAGG+AGG | - | Chr8:14133126-14133145 | MsG0880042794.01.T01:intron | 40.0% | |
ATAAAGTGGTTTACTGGACC+GGG | - | Chr8:14133852-14133871 | MsG0880042794.01.T01:intron | 40.0% | |
CAAGCGGATATCGGATTAAA+TGG | - | Chr8:14134125-14134144 | MsG0880042794.01.T01:intron | 40.0% | |
CCAACAAATGTCTTTCCCAA+AGG | - | Chr8:14133123-14133142 | MsG0880042794.01.T01:intron | 40.0% | |
CCCAATCCCAAAAGGTAAAA+AGG | + | Chr8:14133593-14133612 | None:intergenic | 40.0% | |
CCTTTACTTGTTTGGCCTAT+GGG | - | Chr8:14134427-14134446 | MsG0880042794.01.T01:CDS | 40.0% | |
CTACTCAGATGATTATGGGA+AGG | - | Chr8:14134234-14134253 | MsG0880042794.01.T01:intron | 40.0% | |
CTTCAACTTGGATGACAACT+TGG | + | Chr8:14131423-14131442 | None:intergenic | 40.0% | |
GATAAAGTGGTTTACTGGAC+CGG | - | Chr8:14133851-14133870 | MsG0880042794.01.T01:CDS | 40.0% | |
GATAGCAAGTGAAAGAGAAG+AGG | + | Chr8:14132402-14132421 | None:intergenic | 40.0% | |
GATGCAACTATTGTAGTCGT+TGG | - | Chr8:14134584-14134603 | MsG0880042794.01.T01:five_prime_UTR | 40.0% | |
GCAATTCAAGAAGCCTATTC+TGG | - | Chr8:14132133-14132152 | MsG0880042794.01.T01:intron | 40.0% | |
GCTTCCACGAAACAATGATA+TGG | - | Chr8:14132704-14132723 | MsG0880042794.01.T01:intron | 40.0% | |
GGAAGGATAAAGTGGTTTAC+TGG | - | Chr8:14133846-14133865 | MsG0880042794.01.T01:CDS | 40.0% | |
GGTCCAATTGCTATGAAAGT+TGG | - | Chr8:14133638-14133657 | MsG0880042794.01.T01:intron | 40.0% | |
TAAAGATCAGAGTGATGAGC+GGG | - | Chr8:14132596-14132615 | MsG0880042794.01.T01:intron | 40.0% | |
TATTAGGACCCAATCCCAAA+AGG | + | Chr8:14133601-14133620 | None:intergenic | 40.0% | |
TCCTTTACTTGTTTGGCCTA+TGG | - | Chr8:14134426-14134445 | MsG0880042794.01.T01:CDS | 40.0% | |
TGCAACGAATGCACATTTGT+TGG | + | Chr8:14134621-14134640 | None:intergenic | 40.0% | |
TGTGAGGTCCTTTACTTGTT+TGG | - | Chr8:14134419-14134438 | MsG0880042794.01.T01:CDS | 40.0% | |
TGTGATACAGGAAAATGGAG+AGG | - | Chr8:14134061-14134080 | MsG0880042794.01.T01:CDS | 40.0% | |
TTCAGGGAATGTGAAGTTTG+TGG | - | Chr8:14132087-14132106 | MsG0880042794.01.T01:intron | 40.0% | |
TTCATGACTTTCGGTGAAAG+CGG | - | Chr8:14134191-14134210 | MsG0880042794.01.T01:intron | 40.0% | |
! | AATGCACATTTGTTGGATCC+TGG | + | Chr8:14134614-14134633 | None:intergenic | 40.0% |
! | CCTTTGGGAAAGACATTTGT+TGG | + | Chr8:14133126-14133145 | None:intergenic | 40.0% |
! | GTTTGGTTGGTTGATCTAGT+TGG | - | Chr8:14131648-14131667 | MsG0880042794.01.T01:intron | 40.0% |
!! | AGGTCTCTAGAGTATTCATG+AGG | - | Chr8:14131308-14131327 | MsG0880042794.01.T01:CDS | 40.0% |
!!! | GCCTTTTTACCTTTTGGGAT+TGG | - | Chr8:14133589-14133608 | MsG0880042794.01.T01:intron | 40.0% |
AAATGGAGAGGAGAGCTTTG+AGG | - | Chr8:14134073-14134092 | MsG0880042794.01.T01:CDS | 45.0% | |
AGATGATTATGGGAAGGCAG+AGG | - | Chr8:14134240-14134259 | MsG0880042794.01.T01:intron | 45.0% | |
AGCACCTCTCTTAATGCTTC+GGG | - | Chr8:14134149-14134168 | MsG0880042794.01.T01:intron | 45.0% | |
CAGATCGTTGTTCAGCTTCA+GGG | - | Chr8:14132071-14132090 | MsG0880042794.01.T01:CDS | 45.0% | |
CCCATAGGCCAAACAAGTAA+AGG | + | Chr8:14134430-14134449 | None:intergenic | 45.0% | |
GGGAGACTTTCTGAACGAAA+TGG | - | Chr8:14133358-14133377 | MsG0880042794.01.T01:intron | 45.0% | |
TATTGTACGAACACACAGCC+CGG | + | Chr8:14133873-14133892 | None:intergenic | 45.0% | |
TCACATAACACATGTGGCAG+TGG | - | Chr8:14133208-14133227 | MsG0880042794.01.T01:intron | 45.0% | |
TCATGACTTTCGGTGAAAGC+GGG | - | Chr8:14134192-14134211 | MsG0880042794.01.T01:intron | 45.0% | |
TGACCCCAAAACAGAAGTTC+TGG | + | Chr8:14134290-14134309 | None:intergenic | 45.0% | |
TTAGAAAAAACGGTGGAGGG+TGG | + | Chr8:14131876-14131895 | None:intergenic | 45.0% | |
! | TGTGGTGGGGGTATATTGTT+GGG | - | Chr8:14133661-14133680 | MsG0880042794.01.T01:intron | 45.0% |
! | TTGGATGACAACTTGGGTTG+CGG | + | Chr8:14131416-14131435 | None:intergenic | 45.0% |
!! | CTATGAAAGTTGGTGTGGTG+GGG | - | Chr8:14133648-14133667 | MsG0880042794.01.T01:intron | 45.0% |
!! | GCTATGAAAGTTGGTGTGGT+GGG | - | Chr8:14133647-14133666 | MsG0880042794.01.T01:intron | 45.0% |
!! | TATGAAAGTTGGTGTGGTGG+GGG | - | Chr8:14133649-14133668 | MsG0880042794.01.T01:intron | 45.0% |
!! | TGCTATGAAAGTTGGTGTGG+TGG | - | Chr8:14133646-14133665 | MsG0880042794.01.T01:intron | 45.0% |
!!! | GGCAGAGGATCTTCTAGTTT+TGG | - | Chr8:14134255-14134274 | MsG0880042794.01.T01:intron | 45.0% |
!!! | AATTATTTGTTTTTATATAT+TGG | - | Chr8:14132236-14132255 | MsG0880042794.01.T01:intron | 5.0% |
!!! | ATTATTTGTTTTTATATATT+GGG | - | Chr8:14132237-14132256 | MsG0880042794.01.T01:intron | 5.0% |
ATCCTCGACAACAGCAACAC+TGG | + | Chr8:14134644-14134663 | None:intergenic | 50.0% | |
ATTGTAGTCGTTGGATCGCC+AGG | - | Chr8:14134593-14134612 | MsG0880042794.01.T01:five_prime_UTR | 50.0% | |
CCAGATCGTTGTTCAGCTTC+AGG | - | Chr8:14132070-14132089 | MsG0880042794.01.T01:CDS | 50.0% | |
CCTGAAGCTGAACAACGATC+TGG | + | Chr8:14132073-14132092 | None:intergenic | 50.0% | |
GAGGAGTCCCAACTCATGAA+TGG | + | Chr8:14132383-14132402 | None:intergenic | 50.0% | |
! | GCAACCCGAAGCATTAAGAG+AGG | + | Chr8:14134156-14134175 | None:intergenic | 50.0% |
! | GTGGTGGGGGTATATTGTTG+GGG | - | Chr8:14133662-14133681 | MsG0880042794.01.T01:intron | 50.0% |
! | GTGTGGTGGGGGTATATTGT+TGG | - | Chr8:14133660-14133679 | MsG0880042794.01.T01:intron | 50.0% |
! | CACCAGTGTTGCTGTTGTCG+AGG | - | Chr8:14134639-14134658 | MsG0880042794.01.T01:five_prime_UTR | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 14131262 | 14134901 | 14131262 | ID=MsG0880042794.01;Name=MsG0880042794.01 |
Chr8 | mRNA | 14131262 | 14134901 | 14131262 | ID=MsG0880042794.01.T01;Parent=MsG0880042794.01;Name=MsG0880042794.01.T01;_AED=0.41;_eAED=0.41;_QI=444|0.8|0.66|1|0.8|0.66|6|0|179 |
Chr8 | exon | 14131262 | 14131344 | 14131262 | ID=MsG0880042794.01.T01:exon:3826;Parent=MsG0880042794.01.T01 |
Chr8 | exon | 14131960 | 14132092 | 14131960 | ID=MsG0880042794.01.T01:exon:3825;Parent=MsG0880042794.01.T01 |
Chr8 | exon | 14132754 | 14132810 | 14132754 | ID=MsG0880042794.01.T01:exon:3824;Parent=MsG0880042794.01.T01 |
Chr8 | exon | 14133803 | 14133870 | 14133803 | ID=MsG0880042794.01.T01:exon:3823;Parent=MsG0880042794.01.T01 |
Chr8 | exon | 14134009 | 14134102 | 14134009 | ID=MsG0880042794.01.T01:exon:3822;Parent=MsG0880042794.01.T01 |
Chr8 | exon | 14134353 | 14134901 | 14134353 | ID=MsG0880042794.01.T01:exon:3821;Parent=MsG0880042794.01.T01 |
Chr8 | five_prime_UTR | 14134458 | 14134901 | 14134458 | ID=MsG0880042794.01.T01:five_prime_utr;Parent=MsG0880042794.01.T01 |
Chr8 | CDS | 14134353 | 14134457 | 14134353 | ID=MsG0880042794.01.T01:cds;Parent=MsG0880042794.01.T01 |
Chr8 | CDS | 14134009 | 14134102 | 14134009 | ID=MsG0880042794.01.T01:cds;Parent=MsG0880042794.01.T01 |
Chr8 | CDS | 14133803 | 14133870 | 14133803 | ID=MsG0880042794.01.T01:cds;Parent=MsG0880042794.01.T01 |
Chr8 | CDS | 14132754 | 14132810 | 14132754 | ID=MsG0880042794.01.T01:cds;Parent=MsG0880042794.01.T01 |
Chr8 | CDS | 14131960 | 14132092 | 14131960 | ID=MsG0880042794.01.T01:cds;Parent=MsG0880042794.01.T01 |
Chr8 | CDS | 14131262 | 14131344 | 14131262 | ID=MsG0880042794.01.T01:cds;Parent=MsG0880042794.01.T01 |
Gene Sequence |
Protein sequence |