AlfalfaGEDB | MsG0380017022.01

M. sativa cultivar ZhongmuNo.1 / MsG0380017022.01

KEGG: K01214
GO: GO:0003824 GO:0005975
PFAM: PF00128

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017022.01.T01	XP_003602838.2	75.796	314	14	2	7	285	125	411	1.87E-156	465

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017022.01.T01	Q9M0S5	57.325	314	72	2	7	285	112	398	1.72E-113	347

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017022.01.T01	G7J3Z4	75.796	314	14	2	7	285	125	411	8.92e-157	465

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180000546.01	MsG0380017022.01	0.815920	7.219542e-52	5.043429e-49
MsG0180001149.01	MsG0380017022.01	0.808367	3.206656e-50	1.830181e-47
MsG0180002140.01	MsG0380017022.01	0.829150	6.046903e-55	6.136652e-52
MsG0180003379.01	MsG0380017022.01	0.821901	3.155391e-53	2.600967e-50
MsG0180004025.01	MsG0380017022.01	0.821103	4.824727e-53	3.888935e-50
MsG0180005106.01	MsG0380017022.01	0.832007	1.208402e-55	1.333657e-52
MsG0180005787.01	MsG0380017022.01	0.854019	1.626808e-61	3.583702e-58
MsG0180006096.01	MsG0380017022.01	0.815634	8.358905e-52	5.794564e-49
MsG0180006220.01	MsG0380017022.01	0.818270	2.139546e-52	1.594049e-49
MsG0280011287.01	MsG0380017022.01	0.863638	2.158448e-64	6.589423e-61
MsG0280011376.01	MsG0380017022.01	0.810854	9.371557e-51	5.712371e-48
MsG0380013467.01	MsG0380017022.01	0.855585	5.717294e-62	1.326399e-58
MsG0380013853.01	MsG0380017022.01	0.828882	7.020639e-55	7.068190e-52
MsG0380014727.01	MsG0380017022.01	0.820149	7.988545e-53	6.270952e-50
MsG0380015533.01	MsG0380017022.01	0.815664	8.234833e-52	5.712837e-49
MsG0380015703.01	MsG0380017022.01	0.805905	1.065276e-49	5.703919e-47
MsG0380016117.01	MsG0380017022.01	0.872539	2.943119e-67	1.236352e-63
MsG0380016182.01	MsG0380017022.01	0.850929	1.235302e-60	2.459214e-57
MsG0380016740.01	MsG0380017022.01	0.816113	6.536511e-52	4.590822e-49
MsG0380017021.01	MsG0380017022.01	0.837828	4.128373e-57	5.427899e-54
MsG0380017022.01	MsG0380017023.01	0.933659	1.339927e-95	9.644459e-91
MsG0380017022.01	MsG0380017085.01	0.847336	1.233591e-59	2.185210e-56
MsG0380017022.01	MsG0380017126.01	0.813695	2.247055e-51	1.477719e-48
MsG0380017022.01	MsG0380017791.01	0.809979	1.447601e-50	8.621915e-48
MsG0380017022.01	MsG0380018022.01	0.800048	1.729967e-48	7.975806e-46
MsG0380017022.01	MsG0480018847.01	0.815699	8.086960e-52	5.615684e-49
MsG0380017022.01	MsG0480019126.01	0.803565	3.280560e-49	1.654068e-46
MsG0380017022.01	MsG0480020024.01	0.817474	3.236253e-52	2.359277e-49
MsG0380017022.01	MsG0480020843.01	0.808694	2.730243e-50	1.571496e-47
MsG0380017022.01	MsG0480021776.01	-0.801649	8.150356e-49	3.912978e-46
MsG0380017022.01	MsG0480022243.01	0.840152	1.032531e-57	1.457920e-54
MsG0380017022.01	MsG0480022245.01	0.856127	3.968579e-62	9.374325e-59
MsG0380017022.01	MsG0480022246.01	0.853438	2.389583e-61	5.163550e-58
MsG0380017022.01	MsG0480022248.01	0.813669	2.276655e-51	1.496105e-48
MsG0380017022.01	MsG0480023370.01	0.821553	3.798224e-53	3.100080e-50
MsG0380017022.01	MsG0480023638.01	0.808810	2.579692e-50	1.489367e-47
MsG0380017022.01	MsG0480023652.01	0.853551	2.217622e-61	4.809838e-58
MsG0380017022.01	MsG0580024495.01	0.804213	2.406751e-49	1.233727e-46
MsG0380017022.01	MsG0580024597.01	0.837965	3.806841e-57	5.026220e-54
MsG0380017022.01	MsG0580024775.01	0.814990	1.162693e-51	7.918677e-49
MsG0380017022.01	MsG0580025280.01	0.813905	2.020562e-51	1.336305e-48
MsG0380017022.01	MsG0580029355.01	0.808089	3.676442e-50	2.082886e-47
MsG0380017022.01	MsG0580029914.01	0.803806	2.923359e-49	1.483010e-46
MsG0380017022.01	MsG0680030636.01	0.839785	1.287465e-57	1.797003e-54
MsG0380017022.01	MsG0680031334.01	0.846251	2.443105e-59	4.179454e-56
MsG0380017022.01	MsG0680033459.01	0.808970	2.383995e-50	1.382292e-47
MsG0380017022.01	MsG0680035588.01	0.835173	1.957885e-56	2.375170e-53
MsG0380017022.01	MsG0680035765.01	0.802560	5.294532e-49	2.601513e-46
MsG0380017022.01	MsG0780037082.01	0.828337	9.507271e-55	9.421864e-52
MsG0380017022.01	MsG0780037330.01	0.819216	1.304782e-52	9.978766e-50
MsG0380017022.01	MsG0780037848.01	0.837135	6.215420e-57	7.998626e-54
MsG0380017022.01	MsG0780038833.01	0.819174	1.334015e-52	1.019037e-49
MsG0380017022.01	MsG0780040375.01	-0.807307	5.387457e-50	2.990679e-47
MsG0380017022.01	MsG0780040794.01	0.830430	2.949765e-55	3.107075e-52
MsG0380017022.01	MsG0780041015.01	-0.813309	2.732106e-51	1.777921e-48
MsG0380017022.01	MsG0780041729.01	-0.825319	5.002586e-54	4.544501e-51
MsG0380017022.01	MsG0780041747.01	0.825056	5.771912e-54	5.204283e-51
MsG0380017022.01	MsG0880042794.01	0.825377	4.846714e-54	4.409879e-51
MsG0380017022.01	MsG0880043829.01	0.853006	3.178742e-61	6.768788e-58
MsG0380017022.01	MsG0880043867.01	0.826026	3.400393e-54	3.151743e-51
MsG0380017022.01	MsG0880046377.01	0.848980	4.337261e-60	8.101278e-57
MsG0380017022.01	MsG0880046536.01	0.813307	2.734717e-51	1.779539e-48
MsG0380017022.01	MsG0880046930.01	0.813224	2.852087e-51	1.851616e-48
MsG0280007429.01	MsG0380017022.01	0.832630	8.469612e-56	9.521068e-53
MsG0280008929.01	MsG0380017022.01	0.812171	4.848139e-51	3.060457e-48
MsG0280010288.01	MsG0380017022.01	0.812683	3.747325e-51	2.398086e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017022.01.T01	MTR_3g099500	75.796	314	14	2	7	285	125	411	2.26e-160	465
MsG0380017022.01.T01	MTR_3g099500	71.903	331	14	2	7	285	125	428	1.02e-157	459
MsG0380017022.01.T01	MTR_8g101490	36.735	294	113	8	31	283	122	383	3.82e-48	170
MsG0380017022.01.T01	MTR_8g101490	36.735	294	113	8	31	283	122	383	7.21e-48	170
MsG0380017022.01.T01	MTR_7g094560	28.920	287	138	8	10	275	229	470	2.87e-26	108

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017022.01.T01	AT4G09020	57.325	314	72	2	7	285	112	398	1.76e-114	347
MsG0380017022.01.T01	AT2G39930	37.248	298	108	9	30	283	116	378	6.10e-46	164
MsG0380017022.01.T01	AT2G39930	37.248	298	108	9	30	283	116	378	1.06e-45	163
MsG0380017022.01.T01	AT2G39930	37.248	298	108	9	30	283	116	378	2.05e-45	163
MsG0380017022.01.T01	AT1G03310	30.037	273	110	10	23	267	267	486	7.09e-27	110
MsG0380017022.01.T01	AT1G03310	30.037	273	110	10	23	267	267	486	7.09e-27	110

Find 63 sgRNAs with CRISPR-Local

Find 168 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTCTATACATAGGTTATTT+TGG	0.101279	3:+90799971	MsG0380017022.01.T01:intron
ATTGAAGGTCGAAGATATTT+TGG	0.134802	3:+90798543	MsG0380017022.01.T01:CDS
AGGAAATTGTCTAAGTTTCT+AGG	0.236363	3:+90798576	MsG0380017022.01.T01:CDS
AAGAATACCTCGGCAATATT+TGG	0.242789	3:-90798651	None:intergenic
ATTTCGTGGCATAGATAATA+AGG	0.302515	3:+90800049	MsG0380017022.01.T01:CDS
CAAACAAAACAGGGGATATC+TGG	0.318632	3:+90797815	MsG0380017022.01.T01:CDS
TTCTTCATCTTTCATTGTGC+AGG	0.332427	3:+90798407	MsG0380017022.01.T01:CDS
TAACCATTTGCTTCAACTCT+TGG	0.345521	3:-90799801	None:intergenic
GATCCTCATTCAAACAAAAC+AGG	0.359852	3:+90797805	MsG0380017022.01.T01:CDS
CCTTACACTACTTCATTTCG+TGG	0.377825	3:+90800035	MsG0380017022.01.T01:CDS
AATGAAGTAGTGTAAGGATT+AGG	0.400159	3:-90800029	None:intergenic
AACATTCGTGGAAGCTATCT+TGG	0.400532	3:+90798987	MsG0380017022.01.T01:CDS
CTCTATGCCAGCAGAATGTA+AGG	0.420920	3:-90799827	None:intergenic
AGATTGATGGACCTCAAGAC+TGG	0.429638	3:+90798463	MsG0380017022.01.T01:CDS
AGTCTTGAGGTCCATCAATC+TGG	0.432957	3:-90798461	None:intergenic
AACCATTTGCTTCAACTCTT+GGG	0.434675	3:-90799800	None:intergenic
ACCATGGAAAGGCTACTATC+AGG	0.439431	3:-90797877	None:intergenic
GGAAAATTGCTGAACTTCTC+CGG	0.440640	3:+90800475	MsG0380017022.01.T01:CDS
GCACTAGCATAGCGACTCAT+AGG	0.441731	3:-90799754	None:intergenic
AACTCTTGGGAAGCATTAGC+TGG	0.453115	3:-90799787	None:intergenic
TCATTGTGCAGGATCTTCCT+AGG	0.466830	3:+90798418	MsG0380017022.01.T01:CDS
CCTTATGCAAAACTAATTGA+AGG	0.472436	3:+90798528	MsG0380017022.01.T01:CDS
CGCTATGCTAGTGCTGGTGG+AGG	0.480924	3:+90799763	MsG0380017022.01.T01:CDS
GTTAAAGCCTTACATTCTGC+TGG	0.489939	3:+90799820	MsG0380017022.01.T01:CDS
CCACGAAATGAAGTAGTGTA+AGG	0.493976	3:-90800035	None:intergenic
TTCCCAAGAGTTGAAGCAAA+TGG	0.494723	3:+90799798	MsG0380017022.01.T01:CDS
GGACCTCAAGACTGGGGTAA+GGG	0.501748	3:+90798471	MsG0380017022.01.T01:CDS
TCTATAGGTTTATTACATGC+TGG	0.503472	3:+90800444	MsG0380017022.01.T01:intron
GCCTGATAGTAGCCTTTCCA+TGG	0.510466	3:+90797876	MsG0380017022.01.T01:CDS
AAAGATAAAATTACCACAGC+CGG	0.511082	3:-90800494	None:intergenic
CTGTACGGATACCAGATTGA+TGG	0.514119	3:+90798450	MsG0380017022.01.T01:CDS
GGATGGTGGTATGATAGAAC+TGG	0.516922	3:+90797777	MsG0380017022.01.T01:CDS
TTGCTGAACTTCTCCGGCTG+TGG	0.521450	3:+90800481	MsG0380017022.01.T01:CDS
TGGTATGATAGAACTGGCTT+TGG	0.523068	3:+90797783	MsG0380017022.01.T01:CDS
TGGACCTCAAGACTGGGGTA+AGG	0.527122	3:+90798470	MsG0380017022.01.T01:CDS
AATGGATGAATCTAGTGAGT+TGG	0.529017	3:+90798959	MsG0380017022.01.T01:CDS
CTTACATTCTGCTGGCATAG+AGG	0.546875	3:+90799828	MsG0380017022.01.T01:CDS
ATGAGTCGCTATGCTAGTGC+TGG	0.548674	3:+90799757	MsG0380017022.01.T01:CDS
GACCTCAAGACTGGGGTAAG+GGG	0.549559	3:+90798472	MsG0380017022.01.T01:CDS
CCGTACAGAACATTGCTCCT+AGG	0.551992	3:-90798435	None:intergenic
AAAACTGTGTGAAACAAAAG+TGG	0.559895	3:-90797711	None:intergenic
GCTTTCCAAGATTAATACGT+GGG	0.562344	3:+90799705	MsG0380017022.01.T01:intron
TTTCTCCCCAGTCAAAAGGC+AGG	0.564803	3:-90798617	None:intergenic
GAGTTGGATAACAACATTCG+TGG	0.564919	3:+90798975	MsG0380017022.01.T01:CDS
TAGGGGAAGCATTGACACGC+TGG	0.565015	3:+90797756	MsG0380017022.01.T01:CDS
CCTAGGAGCAATGTTCTGTA+CGG	0.567471	3:+90798435	MsG0380017022.01.T01:CDS
GATTGATGGACCTCAAGACT+GGG	0.569307	3:+90798464	MsG0380017022.01.T01:CDS
AGTCGCTATGCTAGTGCTGG+TGG	0.571734	3:+90799760	MsG0380017022.01.T01:CDS
CTATCTTGGTGTAATTGAGA+AGG	0.591718	3:+90799001	MsG0380017022.01.T01:CDS
TGCCCCTTACCCCAGTCTTG+AGG	0.593507	3:-90798474	None:intergenic
GGAAGCATTGACACGCTGGA+TGG	0.602937	3:+90797760	MsG0380017022.01.T01:CDS
ATTCATCCATTGTAAATGCA+CGG	0.607129	3:-90798947	None:intergenic
ATCCTCATTCAAACAAAACA+GGG	0.607175	3:+90797806	MsG0380017022.01.T01:CDS
TATTACATGCTGGACGACAA+AGG	0.615475	3:+90800454	MsG0380017022.01.T01:CDS
AGCATTGACACGCTGGATGG+TGG	0.615714	3:+90797763	MsG0380017022.01.T01:CDS
TGTCTACAATCATACGAATG+AGG	0.619074	3:+90799998	MsG0380017022.01.T01:CDS
CAATCTTCCAAATATTGCCG+AGG	0.622915	3:+90798644	MsG0380017022.01.T01:CDS
TGCTTTCCAAGATTAATACG+TGG	0.636373	3:+90799704	MsG0380017022.01.T01:intron
CTTTCCAAGATTAATACGTG+GGG	0.654915	3:+90799706	MsG0380017022.01.T01:intron
TATCTGGCACATATGCATTG+AGG	0.655122	3:+90797831	MsG0380017022.01.T01:CDS
GAATGTCCGTGCATTTACAA+TGG	0.662609	3:+90798941	MsG0380017022.01.T01:CDS
TCCTCATTCAAACAAAACAG+GGG	0.687927	3:+90797807	MsG0380017022.01.T01:CDS
ATTGATGGACCTCAAGACTG+GGG	0.734499	3:+90798465	MsG0380017022.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAATACATTATAAAAACAA+AGG	-	Chr3:90797737-90797756	None:intergenic	10.0%
!!!	TGTTTTTATAATGTATTTTA+GGG	+	Chr3:90797738-90797757	MsG0380017022.01.T01:CDS	10.0%
!!!	TTGTTTTTATAATGTATTTT+AGG	+	Chr3:90797737-90797756	MsG0380017022.01.T01:CDS	10.0%
!!	AAAATATTGACAATAATAGA+TGG	+	Chr3:90798132-90798151	MsG0380017022.01.T01:intron	15.0%
!!	ATAGCATTAAACATTAAAAA+AGG	-	Chr3:90800232-90800251	None:intergenic	15.0%
!!	ATATATTTCTTTATTAGGAA+GGG	-	Chr3:90799518-90799537	None:intergenic	15.0%
!!	TAGCATTAAACATTAAAAAA+GGG	-	Chr3:90800231-90800250	None:intergenic	15.0%
!!	TATATATTTCTTTATTAGGA+AGG	-	Chr3:90799519-90799538	None:intergenic	15.0%
!!!	AAAAACAATTTTATTCTTTC+TGG	+	Chr3:90799538-90799557	MsG0380017022.01.T01:intron	15.0%
!!!	GTTTTTATAATGTATTTTAG+GGG	+	Chr3:90797739-90797758	MsG0380017022.01.T01:CDS	15.0%
!!!	TAATTTTTTTTCCCATTTTA+AGG	+	Chr3:90798266-90798285	MsG0380017022.01.T01:intron	15.0%
!!!	TTAAAATCTTTGAAAGTAAT+TGG	+	Chr3:90798197-90798216	MsG0380017022.01.T01:intron	15.0%
!!	AACCATATAGAACAAAAAAA+AGG	-	Chr3:90800139-90800158	None:intergenic	20.0%
!!	AGCATAATGAATACATAAAA+TGG	-	Chr3:90798880-90798899	None:intergenic	20.0%
!!	ATATAAAATAAGACAGAATC+AGG	-	Chr3:90799916-90799935	None:intergenic	20.0%
!!	CTGGTAATAAAATTCATATT+CGG	-	Chr3:90798096-90798115	None:intergenic	20.0%
!!	TAAACTTTCTTCATTTCTAT+AGG	+	Chr3:90800429-90800448	MsG0380017022.01.T01:intron	20.0%
!!	TGGTAATAAAATTCATATTC+GGG	-	Chr3:90798095-90798114	None:intergenic	20.0%
!!	TTAGCTTAAAACTATTTGTA+GGG	+	Chr3:90798750-90798769	MsG0380017022.01.T01:intron	20.0%
!!	TTTATGAAGAAACATATCAT+AGG	-	Chr3:90798851-90798870	None:intergenic	20.0%
!!!	AAAAGCATTATATATGACTT+TGG	+	Chr3:90800327-90800346	MsG0380017022.01.T01:intron	20.0%
!!!	AGATTAGTTCCTTTATTTAT+TGG	-	Chr3:90799373-90799392	None:intergenic	20.0%
!!!	ATTAGCTTAAAACTATTTGT+AGG	+	Chr3:90798749-90798768	MsG0380017022.01.T01:intron	20.0%
!!!	ATTAGTTCCTTTATTTATTG+GGG	-	Chr3:90799371-90799390	None:intergenic	20.0%
!!!	ATTCGCATCTTTATTTTATT+TGG	-	Chr3:90800300-90800319	None:intergenic	20.0%
!!!	CTTTCTATTATCATAGTTTT+GGG	-	Chr3:90799479-90799498	None:intergenic	20.0%
!!!	GATTAGTTCCTTTATTTATT+GGG	-	Chr3:90799372-90799391	None:intergenic	20.0%
!!!	TTGTCAAAAATGTCTTATTA+TGG	+	Chr3:90798066-90798085	MsG0380017022.01.T01:intron	20.0%
!!!	TTTCTATTATCATAGTTTTG+GGG	-	Chr3:90799478-90799497	None:intergenic	20.0%
!!!	TTTTGACAAGATTAATACAA+TGG	-	Chr3:90798055-90798074	None:intergenic	20.0%
!	AAAATAAAGATGCGAATGTT+AGG	+	Chr3:90800303-90800322	MsG0380017022.01.T01:intron	25.0%
!	AACAGCTATATTCCTAAAAT+TGG	-	Chr3:90799098-90799117	None:intergenic	25.0%
!	AATAGAAAGGAAAAATACAG+AGG	+	Chr3:90799490-90799509	MsG0380017022.01.T01:intron	25.0%
!	AGTAGAGTAATTGTAATACA+TGG	-	Chr3:90800180-90800199	None:intergenic	25.0%
!	CCAAAACTATGATAATAGAA+AGG	+	Chr3:90799477-90799496	MsG0380017022.01.T01:intron	25.0%
!	GATAAATCTTCTCTATACAT+AGG	+	Chr3:90799962-90799981	MsG0380017022.01.T01:intron	25.0%
!	TGAATATCCCCAATAAATAA+AGG	+	Chr3:90799361-90799380	MsG0380017022.01.T01:intron	25.0%
!	TTCATCTATGCAATTATGAA+AGG	-	Chr3:90797975-90797994	None:intergenic	25.0%
!!	AAAATCTTTTCCCTAAATCA+AGG	+	Chr3:90798710-90798729	MsG0380017022.01.T01:intron	25.0%
!!	CCTTTCTATTATCATAGTTT+TGG	-	Chr3:90799480-90799499	None:intergenic	25.0%
!!	TCTCTATACATAGGTTATTT+TGG	+	Chr3:90799971-90799990	MsG0380017022.01.T01:intron	25.0%
!!!	ATGTTTTTTTTTTCCTTCGA+TGG	+	Chr3:90799613-90799632	MsG0380017022.01.T01:intron	25.0%
!!!	TGCCTTTTTTTTGTTCTATA+TGG	+	Chr3:90800134-90800153	MsG0380017022.01.T01:intron	25.0%
	AAAACTGTGTGAAACAAAAG+TGG	-	Chr3:90797714-90797733	None:intergenic	30.0%
	AAAGATAAAATTACCACAGC+CGG	-	Chr3:90800497-90800516	None:intergenic	30.0%
	AATCAGGAGATCAAACTATT+AGG	-	Chr3:90799900-90799919	None:intergenic	30.0%
	AATGAAGTAGTGTAAGGATT+AGG	-	Chr3:90800032-90800051	None:intergenic	30.0%
	AGCTATATTCCTAAAATTGG+AGG	-	Chr3:90799095-90799114	None:intergenic	30.0%
	AGGAAATTGTCTAAGTTTCT+AGG	+	Chr3:90798576-90798595	MsG0380017022.01.T01:CDS	30.0%
	ATAATTTACCATGTGATCTC+TGG	-	Chr3:90799295-90799314	None:intergenic	30.0%
	ATCCTCATTCAAACAAAACA+GGG	+	Chr3:90797806-90797825	MsG0380017022.01.T01:CDS	30.0%
	ATCTCATCAAACTCAAAGAT+AGG	-	Chr3:90799249-90799268	None:intergenic	30.0%
	ATTCATCCATTGTAAATGCA+CGG	-	Chr3:90798950-90798969	None:intergenic	30.0%
	ATTTCGTGGCATAGATAATA+AGG	+	Chr3:90800049-90800068	MsG0380017022.01.T01:CDS	30.0%
	CAGCTAAATGTGTGTTATAA+TGG	-	Chr3:90798376-90798395	None:intergenic	30.0%
	CCTTATGCAAAACTAATTGA+AGG	+	Chr3:90798528-90798547	MsG0380017022.01.T01:CDS	30.0%
	GTATTTCAATGTCACAACTT+TGG	+	Chr3:90799862-90799881	MsG0380017022.01.T01:intron	30.0%
	TAATTTACCATGTGATCTCT+GGG	-	Chr3:90799294-90799313	None:intergenic	30.0%
	TATATTCCTAAAATTGGAGG+TGG	-	Chr3:90799092-90799111	None:intergenic	30.0%
	TCAATCTCATGCAGTATTAT+AGG	-	Chr3:90800259-90800278	None:intergenic	30.0%
	TCTATAGGTTTATTACATGC+TGG	+	Chr3:90800444-90800463	MsG0380017022.01.T01:intron	30.0%
	TTGTATGAAGCCTTGATTTA+GGG	-	Chr3:90798723-90798742	None:intergenic	30.0%
	TTTGTATGAAGCCTTGATTT+AGG	-	Chr3:90798724-90798743	None:intergenic	30.0%
!	AGTATCATATAATGCCACTT+AGG	-	Chr3:90799670-90799689	None:intergenic	30.0%
!	ATTGAAGGTCGAAGATATTT+TGG	+	Chr3:90798543-90798562	MsG0380017022.01.T01:CDS	30.0%
!	TATCTTTGAGTTTGATGAGA+TGG	+	Chr3:90799248-90799267	MsG0380017022.01.T01:intron	30.0%
!	TTGAAGGTCGAAGATATTTT+GGG	+	Chr3:90798544-90798563	MsG0380017022.01.T01:CDS	30.0%
!!!	CCTTCAATTAGTTTTGCATA+AGG	-	Chr3:90798531-90798550	None:intergenic	30.0%
	AACCATTTGCTTCAACTCTT+GGG	-	Chr3:90799803-90799822	None:intergenic	35.0%
	AAGAATACCTCGGCAATATT+TGG	-	Chr3:90798654-90798673	None:intergenic	35.0%
	AATGGATGAATCTAGTGAGT+TGG	+	Chr3:90798959-90798978	MsG0380017022.01.T01:CDS	35.0%
	ACAAAGCAAAGGTAGAATAC+AGG	-	Chr3:90798776-90798795	None:intergenic	35.0%
	ACAAGTGATGAGCCTTAAAA+TGG	-	Chr3:90798281-90798300	None:intergenic	35.0%
	ACTGCATGAGATTGAATGTT+GGG	+	Chr3:90800264-90800283	MsG0380017022.01.T01:intron	35.0%
	ATAACCCCACGTATTAATCT+TGG	-	Chr3:90799713-90799732	None:intergenic	35.0%
	CAAGTGATGAGCCTTAAAAT+GGG	-	Chr3:90798280-90798299	None:intergenic	35.0%
	CTTTCCAAGATTAATACGTG+GGG	+	Chr3:90799706-90799725	MsG0380017022.01.T01:intron	35.0%
	GATCCTCATTCAAACAAAAC+AGG	+	Chr3:90797805-90797824	MsG0380017022.01.T01:CDS	35.0%
	GCTTTCCAAGATTAATACGT+GGG	+	Chr3:90799705-90799724	MsG0380017022.01.T01:intron	35.0%
	TAACCATTTGCTTCAACTCT+TGG	-	Chr3:90799804-90799823	None:intergenic	35.0%
	TACTGCATGAGATTGAATGT+TGG	+	Chr3:90800263-90800282	MsG0380017022.01.T01:intron	35.0%
	TCCTCATTCAAACAAAACAG+GGG	+	Chr3:90797807-90797826	MsG0380017022.01.T01:CDS	35.0%
	TCTCCATTTCTCCATTACTA+CGG	+	Chr3:90799393-90799412	MsG0380017022.01.T01:intron	35.0%
	TGCTTTCCAAGATTAATACG+TGG	+	Chr3:90799704-90799723	MsG0380017022.01.T01:intron	35.0%
	TGTCTACAATCATACGAATG+AGG	+	Chr3:90799998-90800017	MsG0380017022.01.T01:CDS	35.0%
	TTCTTCATCTTTCATTGTGC+AGG	+	Chr3:90798407-90798426	MsG0380017022.01.T01:CDS	35.0%
!	AAACCGTAGTAATGGAGAAA+TGG	-	Chr3:90799399-90799418	None:intergenic	35.0%
!	CTATCTTGGTGTAATTGAGA+AGG	+	Chr3:90799001-90799020	MsG0380017022.01.T01:CDS	35.0%
!	TAATTTTCTCCCCAGTCAAA+AGG	-	Chr3:90798624-90798643	None:intergenic	35.0%
!	TGAAAGCTTTTCCACAAACA+AGG	-	Chr3:90800206-90800225	None:intergenic	35.0%
!	TGAAGGTCGAAGATATTTTG+GGG	+	Chr3:90798545-90798564	MsG0380017022.01.T01:CDS	35.0%
!	TGTAACTTTGACTTCCTAAG+TGG	+	Chr3:90799653-90799672	MsG0380017022.01.T01:intron	35.0%
!	TTCTCCATTACTACGGTTTT+GGG	+	Chr3:90799400-90799419	MsG0380017022.01.T01:intron	35.0%
!	TTTACGACATATAAGAGTGC+TGG	-	Chr3:90798115-90798134	None:intergenic	35.0%
!	TTTCTCCATTACTACGGTTT+TGG	+	Chr3:90799399-90799418	MsG0380017022.01.T01:intron	35.0%
!!	GATATTTTGGGGATATTAGC+AGG	+	Chr3:90798556-90798575	MsG0380017022.01.T01:CDS	35.0%
	AACATTCGTGGAAGCTATCT+TGG	+	Chr3:90798987-90799006	MsG0380017022.01.T01:CDS	40.0%
	ACAGTTTCAGCCAAAAACCA+TGG	-	Chr3:90797896-90797915	None:intergenic	40.0%
	AGTGCAGTAAGGTGTATCAA+TGG	+	Chr3:90799052-90799071	MsG0380017022.01.T01:intron	40.0%
	CAAACAAAACAGGGGATATC+TGG	+	Chr3:90797815-90797834	MsG0380017022.01.T01:CDS	40.0%
	CAATCTTCCAAATATTGCCG+AGG	+	Chr3:90798644-90798663	MsG0380017022.01.T01:CDS	40.0%
	CCACGAAATGAAGTAGTGTA+AGG	-	Chr3:90800038-90800057	None:intergenic	40.0%
	CCTTACACTACTTCATTTCG+TGG	+	Chr3:90800035-90800054	MsG0380017022.01.T01:CDS	40.0%
	CTGATATCTTTGACCATCGA+AGG	-	Chr3:90799629-90799648	None:intergenic	40.0%
	GAATGTCCGTGCATTTACAA+TGG	+	Chr3:90798941-90798960	MsG0380017022.01.T01:CDS	40.0%
	GAGTTGGATAACAACATTCG+TGG	+	Chr3:90798975-90798994	MsG0380017022.01.T01:CDS	40.0%
	GGAAAATTGCTGAACTTCTC+CGG	+	Chr3:90800475-90800494	MsG0380017022.01.T01:CDS	40.0%
	GGATATTCAGTACAGTGAAG+AGG	-	Chr3:90799350-90799369	None:intergenic	40.0%
	GTAACATCCGTGCTATCATT+GGG	+	Chr3:90799023-90799042	MsG0380017022.01.T01:intron	40.0%
	GTTAAAGCCTTACATTCTGC+TGG	+	Chr3:90799820-90799839	MsG0380017022.01.T01:CDS	40.0%
	GTTATGCAGGAAGAATACCT+CGG	-	Chr3:90798664-90798683	None:intergenic	40.0%
	TAAGGTGTATCAATGGTCAG+TGG	+	Chr3:90799059-90799078	MsG0380017022.01.T01:intron	40.0%
	TATCTGGCACATATGCATTG+AGG	+	Chr3:90797831-90797850	MsG0380017022.01.T01:CDS	40.0%
	TATTACATGCTGGACGACAA+AGG	+	Chr3:90800454-90800473	MsG0380017022.01.T01:CDS	40.0%
	TGTGATACCCAATGATAGCA+CGG	-	Chr3:90799033-90799052	None:intergenic	40.0%
	TTCAGCCAAAAACCATGGAA+AGG	-	Chr3:90797891-90797910	None:intergenic	40.0%
	TTCCCAAGAGTTGAAGCAAA+TGG	+	Chr3:90799798-90799817	MsG0380017022.01.T01:CDS	40.0%
	TTCGAGTAACATCGTTATGC+AGG	-	Chr3:90798677-90798696	None:intergenic	40.0%
!	AGTAGCCTTTCCATGGTTTT+TGG	+	Chr3:90797883-90797902	MsG0380017022.01.T01:intron	40.0%
!	TCAATGTCACAACTTTGGAG+TGG	+	Chr3:90799867-90799886	MsG0380017022.01.T01:intron	40.0%
!	TGGTATGATAGAACTGGCTT+TGG	+	Chr3:90797783-90797802	MsG0380017022.01.T01:CDS	40.0%
!!	CATTGATACCAAGCTCTAGA+AGG	-	Chr3:90799212-90799231	None:intergenic	40.0%
!!!	CATAGTTTTGGGGTGTATAG+AGG	-	Chr3:90799468-90799487	None:intergenic	40.0%
!!!	TCCCCTGTTTTGTTTGAATG+AGG	-	Chr3:90797811-90797830	None:intergenic	40.0%
	ACCATGGAAAGGCTACTATC+AGG	-	Chr3:90797880-90797899	None:intergenic	45.0%
	AGAGCTTGGTATCAATGCAG+TGG	+	Chr3:90799215-90799234	MsG0380017022.01.T01:intron	45.0%
	AGTCTTGAGGTCCATCAATC+TGG	-	Chr3:90798464-90798483	None:intergenic	45.0%
	CCTAGGAGCAATGTTCTGTA+CGG	+	Chr3:90798435-90798454	MsG0380017022.01.T01:CDS	45.0%
	CGCAAAAGCAGACAAAGCAA+AGG	-	Chr3:90798787-90798806	None:intergenic	45.0%
	CTCTATGCCAGCAGAATGTA+AGG	-	Chr3:90799830-90799849	None:intergenic	45.0%
	CTGTACGGATACCAGATTGA+TGG	+	Chr3:90798450-90798469	MsG0380017022.01.T01:CDS	45.0%
	CTTACATTCTGCTGGCATAG+AGG	+	Chr3:90799828-90799847	MsG0380017022.01.T01:CDS	45.0%
	GGTAACATCCGTGCTATCAT+TGG	+	Chr3:90799022-90799041	MsG0380017022.01.T01:intron	45.0%
	TCATTGTGCAGGATCTTCCT+AGG	+	Chr3:90798418-90798437	MsG0380017022.01.T01:CDS	45.0%
	TCCAAATCCCAGAGATCACA+TGG	+	Chr3:90799284-90799303	MsG0380017022.01.T01:intron	45.0%
	TGCTCCCAAAACCGTAGTAA+TGG	-	Chr3:90799407-90799426	None:intergenic	45.0%
	TTGGGTATCACAGTGCAGTA+AGG	+	Chr3:90799041-90799060	MsG0380017022.01.T01:intron	45.0%
!	ACTCTACTGCACCTTGTTTG+TGG	+	Chr3:90800192-90800211	MsG0380017022.01.T01:intron	45.0%
!	AGATTGATGGACCTCAAGAC+TGG	+	Chr3:90798463-90798482	MsG0380017022.01.T01:CDS	45.0%
!	ATTGATGGACCTCAAGACTG+GGG	+	Chr3:90798465-90798484	MsG0380017022.01.T01:CDS	45.0%
!	GATTGATGGACCTCAAGACT+GGG	+	Chr3:90798464-90798483	MsG0380017022.01.T01:CDS	45.0%
!	GGATGGTGGTATGATAGAAC+TGG	+	Chr3:90797777-90797796	MsG0380017022.01.T01:CDS	45.0%
!	TAGAAGGTGTGGGATCTTAG+AGG	-	Chr3:90799196-90799215	None:intergenic	45.0%
!	TGCATGCCACCTCCAATTTT+AGG	+	Chr3:90799083-90799102	MsG0380017022.01.T01:intron	45.0%
!!	AACTCTTGGGAAGCATTAGC+TGG	-	Chr3:90799790-90799809	None:intergenic	45.0%
!!	ACCATGTGATCTCTGGGATT+TGG	-	Chr3:90799288-90799307	None:intergenic	45.0%
!!	ATACCAAGCTCTAGAAGGTG+TGG	-	Chr3:90799207-90799226	None:intergenic	45.0%
!!	TACCAAGCTCTAGAAGGTGT+GGG	-	Chr3:90799206-90799225	None:intergenic	45.0%
!!!	TTTTTATATATTTCTTTATT+AGG	-	Chr3:90799523-90799542	None:intergenic	5.0%
	ATGAGTCGCTATGCTAGTGC+TGG	+	Chr3:90799757-90799776	MsG0380017022.01.T01:CDS	50.0%
	CCGTACAGAACATTGCTCCT+AGG	-	Chr3:90798438-90798457	None:intergenic	50.0%
	GCACTAGCATAGCGACTCAT+AGG	-	Chr3:90799757-90799776	None:intergenic	50.0%
	GCCTGATAGTAGCCTTTCCA+TGG	+	Chr3:90797876-90797895	MsG0380017022.01.T01:CDS	50.0%
	TTTCTCCCCAGTCAAAAGGC+AGG	-	Chr3:90798620-90798639	None:intergenic	50.0%
!	TTGACAGCCTGCCTTTTGAC+TGG	+	Chr3:90798610-90798629	MsG0380017022.01.T01:CDS	50.0%
!!	ATCCCACACCTTCTAGAGCT+TGG	+	Chr3:90799201-90799220	MsG0380017022.01.T01:intron	50.0%
!!	TGACAGCCTGCCTTTTGACT+GGG	+	Chr3:90798611-90798630	MsG0380017022.01.T01:CDS	50.0%
	GACCTCAAGACTGGGGTAAG+GGG	+	Chr3:90798472-90798491	MsG0380017022.01.T01:CDS	55.0%
	GGACCTCAAGACTGGGGTAA+GGG	+	Chr3:90798471-90798490	MsG0380017022.01.T01:CDS	55.0%
	TGGACCTCAAGACTGGGGTA+AGG	+	Chr3:90798470-90798489	MsG0380017022.01.T01:CDS	55.0%
	TTGCTGAACTTCTCCGGCTG+TGG	+	Chr3:90800481-90800500	MsG0380017022.01.T01:CDS	55.0%
!	AGTCGCTATGCTAGTGCTGG+TGG	+	Chr3:90799760-90799779	MsG0380017022.01.T01:CDS	55.0%
!!	AGCATTGACACGCTGGATGG+TGG	+	Chr3:90797763-90797782	MsG0380017022.01.T01:CDS	55.0%
!!	GACAGCCTGCCTTTTGACTG+GGG	+	Chr3:90798612-90798631	MsG0380017022.01.T01:CDS	55.0%
!!	GGAAGCATTGACACGCTGGA+TGG	+	Chr3:90797760-90797779	MsG0380017022.01.T01:CDS	55.0%
!!	TAGGGGAAGCATTGACACGC+TGG	+	Chr3:90797756-90797775	MsG0380017022.01.T01:CDS	55.0%
	TGCCCCTTACCCCAGTCTTG+AGG	-	Chr3:90798477-90798496	None:intergenic	60.0%
!!	CGCTATGCTAGTGCTGGTGG+AGG	+	Chr3:90799763-90799782	MsG0380017022.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	90797706	90800522	90797706	ID=MsG0380017022.01;Name=MsG0380017022.01
Chr3	mRNA	90797706	90800522	90797706	ID=MsG0380017022.01.T01;Parent=MsG0380017022.01;Name=MsG0380017022.01.T01;_AED=0.49;_eAED=0.55;_QI=0\|0.6\|0.5\|1\|0.4\|0.16\|6\|0\|287
Chr3	exon	90797706	90797897	90797706	ID=MsG0380017022.01.T01:exon:15650;Parent=MsG0380017022.01.T01
Chr3	exon	90798393	90798665	90798393	ID=MsG0380017022.01.T01:exon:15651;Parent=MsG0380017022.01.T01
Chr3	exon	90798918	90799022	90798918	ID=MsG0380017022.01.T01:exon:15652;Parent=MsG0380017022.01.T01
Chr3	exon	90799715	90799849	90799715	ID=MsG0380017022.01.T01:exon:15653;Parent=MsG0380017022.01.T01
Chr3	exon	90799984	90800070	90799984	ID=MsG0380017022.01.T01:exon:15654;Parent=MsG0380017022.01.T01
Chr3	exon	90800451	90800522	90800451	ID=MsG0380017022.01.T01:exon:15655;Parent=MsG0380017022.01.T01
Chr3	CDS	90797706	90797897	90797706	ID=MsG0380017022.01.T01:cds;Parent=MsG0380017022.01.T01
Chr3	CDS	90798393	90798665	90798393	ID=MsG0380017022.01.T01:cds;Parent=MsG0380017022.01.T01
Chr3	CDS	90798918	90799022	90798918	ID=MsG0380017022.01.T01:cds;Parent=MsG0380017022.01.T01
Chr3	CDS	90799715	90799849	90799715	ID=MsG0380017022.01.T01:cds;Parent=MsG0380017022.01.T01
Chr3	CDS	90799984	90800070	90799984	ID=MsG0380017022.01.T01:cds;Parent=MsG0380017022.01.T01
Chr3	CDS	90800451	90800522	90800451	ID=MsG0380017022.01.T01:cds;Parent=MsG0380017022.01.T01

Gene Sequence

>MsG0380017022.01.T01

TTGGTCCACTTTTGTTTCACACAGTTTTCCTTTGTTTTTATAATGTATTTTAGGGGAAGCATTGACACGCTGGATGGTGGTATGATAGAACTGGCTTTGGATCCTCATTCAAACAAAACAGGGGATATCTGGCACATATGCATTGAGGTGCTTTCTGTGATATTGCATATGCCTGATAGTAGCCTTTCCATGCTGATAATTTTTTTTTCTTCATCTTTCATTGTGCAGGATCTTCCTAGGAGCAATGTTCTGTACGGATACCAGATTGATGGACCTCAAGACTGGGGTAAGGGGCATCGATTTGACAGAAGCATTGTGCTTGTTGATCCTTATGCAAAACTAATTGAAGGTCGAAGATATTTTGGGGATATTAGCAGGAAATTGTCTAAGTTTCTAGGCACATATGATTTTGACAGCCTGCCTTTTGACTGGGGAGAAAATTACAATCTTCCAAATATTGCCGAGAAAGATCTTGTTATATATGAGATGAATGTCCGTGCATTTACAATGGATGAATCTAGTGAGTTGGATAACAACATTCGTGGAAGCTATCTTGGTGTAATTGAGAAGATTAATACGTGGGGTTATTCAACAATAAATTTCTTTGCTCCTATGAGTCGCTATGCTAGTGCTGGTGGAGGACCAGCTAATGCTTCCCAAGAGTTGAAGCAAATGGTTAAAGCCTTACATTCTGCTGGCATAGAGGTTATTTTGGATGTTGTCTACAATCATACGAATGAGGCTGATGATCCTAATCCTTACACTACTTCATTTCGTGGCATAGATAATAAGGTTTATTACATGCTGGACGACAAAGGAAAATTGCTGAACTTCTCCGGCTGTGGTAATTTTATCTTTTTCTAA

Protein sequence

>MsG0380017022.01.T01

LVHFCFTQFSFVFIMYFRGSIDTLDGGMIELALDPHSNKTGDIWHICIEVLSVILHMPDSSLSMLIIFFSSSFIVQDLPRSNVLYGYQIDGPQDWGKGHRFDRSIVLVDPYAKLIEGRRYFGDISRKLSKFLGTYDFDSLPFDWGENYNLPNIAEKDLVIYEMNVRAFTMDESSELDNNIRGSYLGVIEKINTWGYSTINFFAPMSRYASAGGGPANASQELKQMVKALHSAGIEVILDVVYNHTNEADDPNPYTTSFRGIDNKVYYMLDDKGKLLNFSGCGNFIFF*