Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040794.01.T02 | AES81593.2 | 90.659 | 364 | 22 | 4 | 1 | 363 | 24 | 376 | 0 | 607 |
| MsG0780040794.01.T01 | AES81593.2 | 90.659 | 364 | 22 | 4 | 1 | 363 | 24 | 376 | 0 | 607 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040794.01.T01 | G7KXF9 | 90.659 | 364 | 22 | 4 | 1 | 363 | 24 | 376 | 0.0 | 607 |
| MsG0780040794.01.T02 | G7KXF9 | 90.659 | 364 | 22 | 4 | 1 | 363 | 24 | 376 | 0.0 | 607 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048016.01 | MsG0780040794.01 | 0.803108 | 4.080215e-49 | 2.032999e-46 |
| MsG0080048748.01 | MsG0780040794.01 | 0.827225 | 1.759402e-54 | 1.688009e-51 |
| MsG0080048849.01 | MsG0780040794.01 | 0.840799 | 6.995309e-58 | 1.007695e-54 |
| MsG0080048938.01 | MsG0780040794.01 | 0.815218 | 1.034832e-51 | 7.091157e-49 |
| MsG0080049069.01 | MsG0780040794.01 | 0.851622 | 7.871443e-61 | 1.602647e-57 |
| MsG0080049147.01 | MsG0780040794.01 | 0.834957 | 2.219052e-56 | 2.674822e-53 |
| MsG0180000114.01 | MsG0780040794.01 | 0.801834 | 7.467129e-49 | 3.601969e-46 |
| MsG0180000599.01 | MsG0780040794.01 | 0.838350 | 3.030142e-57 | 4.047434e-54 |
| MsG0180001100.01 | MsG0780040794.01 | 0.824162 | 9.370995e-54 | 8.235562e-51 |
| MsG0180002700.01 | MsG0780040794.01 | 0.834902 | 2.291659e-56 | 2.757448e-53 |
| MsG0180003357.01 | MsG0780040794.01 | 0.805462 | 1.319654e-49 | 6.986131e-47 |
| MsG0180003821.01 | MsG0780040794.01 | 0.826997 | 1.994897e-54 | 1.901239e-51 |
| MsG0180004025.01 | MsG0780040794.01 | 0.871519 | 6.423636e-67 | 2.598935e-63 |
| MsG0180004246.01 | MsG0780040794.01 | 0.827029 | 1.960570e-54 | 1.870196e-51 |
| MsG0180004390.01 | MsG0780040794.01 | 0.829302 | 5.554227e-55 | 5.663124e-52 |
| MsG0180004493.01 | MsG0780040794.01 | 0.811768 | 5.935291e-51 | 3.706064e-48 |
| MsG0180005220.01 | MsG0780040794.01 | 0.807584 | 4.707567e-50 | 2.631798e-47 |
| MsG0180005240.01 | MsG0780040794.01 | 0.823360 | 1.444553e-53 | 1.240939e-50 |
| MsG0180005339.01 | MsG0780040794.01 | 0.812137 | 4.932871e-51 | 3.111007e-48 |
| MsG0180005787.01 | MsG0780040794.01 | 0.802979 | 4.337562e-49 | 2.154153e-46 |
| MsG0180005803.01 | MsG0780040794.01 | 0.817500 | 3.192570e-52 | 2.329035e-49 |
| MsG0180005807.01 | MsG0780040794.01 | 0.815126 | 1.084477e-51 | 7.412970e-49 |
| MsG0180006025.01 | MsG0780040794.01 | 0.822357 | 2.473736e-53 | 2.065830e-50 |
| MsG0180006054.01 | MsG0780040794.01 | 0.811610 | 6.422230e-51 | 3.993342e-48 |
| MsG0180006096.01 | MsG0780040794.01 | 0.813226 | 2.848952e-51 | 1.849661e-48 |
| MsG0180006104.01 | MsG0780040794.01 | 0.841456 | 4.700786e-58 | 6.911451e-55 |
| MsG0780040278.01 | MsG0780040794.01 | 0.809721 | 1.644864e-50 | 9.730731e-48 |
| MsG0780040794.01 | MsG0780041015.01 | -0.825186 | 5.376875e-54 | 4.866270e-51 |
| MsG0780040794.01 | MsG0780041482.01 | 0.811223 | 7.796961e-51 | 4.798985e-48 |
| MsG0780040794.01 | MsG0780041729.01 | -0.833199 | 6.117710e-56 | 6.995185e-53 |
| MsG0780040794.01 | MsG0780041747.01 | 0.868900 | 4.630185e-66 | 1.703426e-62 |
| MsG0780040794.01 | MsG0880041852.01 | 0.815012 | 1.149726e-51 | 7.835126e-49 |
| MsG0780040794.01 | MsG0880042022.01 | 0.806312 | 8.743514e-50 | 4.730522e-47 |
| MsG0780040794.01 | MsG0880042035.01 | 0.808015 | 3.812053e-50 | 2.155450e-47 |
| MsG0780040794.01 | MsG0880042086.01 | 0.848530 | 5.780898e-60 | 1.064081e-56 |
| MsG0780040794.01 | MsG0880042305.01 | 0.810309 | 1.228910e-50 | 7.382326e-48 |
| MsG0780040794.01 | MsG0880042415.01 | 0.800479 | 1.413577e-48 | 6.588699e-46 |
| MsG0780040794.01 | MsG0880042622.01 | 0.813071 | 3.081936e-51 | 1.992532e-48 |
| MsG0780040794.01 | MsG0880042695.01 | 0.801408 | 9.134128e-49 | 4.358713e-46 |
| MsG0780040794.01 | MsG0880042794.01 | 0.856523 | 3.037406e-62 | 7.271433e-59 |
| MsG0780040794.01 | MsG0880042948.01 | 0.828424 | 9.058474e-55 | 9.000518e-52 |
| MsG0780040794.01 | MsG0880043107.01 | 0.830600 | 2.681215e-55 | 2.838277e-52 |
| MsG0780040794.01 | MsG0880043829.01 | 0.841028 | 6.089012e-58 | 8.832902e-55 |
| MsG0780040794.01 | MsG0880044876.01 | 0.813183 | 2.912193e-51 | 1.888486e-48 |
| MsG0780040794.01 | MsG0880045190.01 | 0.876210 | 1.672834e-68 | 8.041512e-65 |
| MsG0780040794.01 | MsG0880045544.01 | 0.841100 | 5.831948e-58 | 8.478614e-55 |
| MsG0780040794.01 | MsG0880046880.01 | 0.830878 | 2.291967e-55 | 2.446221e-52 |
| MsG0780040794.01 | MsG0880047152.01 | 0.836847 | 7.359202e-57 | 9.388812e-54 |
| MsG0780040794.01 | MsG0880047267.01 | 0.805651 | 1.204553e-49 | 6.407672e-47 |
| MsG0780040794.01 | MsG0880047481.01 | -0.823905 | 1.076674e-53 | 9.394013e-51 |
| MsG0780040794.01 | MsG0880047696.01 | 0.828166 | 1.045438e-54 | 1.030961e-51 |
| MsG0280010564.01 | MsG0780040794.01 | 0.833411 | 5.417622e-56 | 6.234139e-53 |
| MsG0280010916.01 | MsG0780040794.01 | 0.863193 | 2.965053e-64 | 8.912430e-61 |
| MsG0280011073.01 | MsG0780040794.01 | 0.901704 | 2.045802e-78 | 2.797588e-74 |
| MsG0280011110.01 | MsG0780040794.01 | -0.807954 | 3.926659e-50 | 2.216712e-47 |
| MsG0280011255.01 | MsG0780040794.01 | 0.806702 | 7.236902e-50 | 3.954500e-47 |
| MsG0280011272.01 | MsG0780040794.01 | -0.817723 | 2.844784e-52 | 2.087991e-49 |
| MsG0280011287.01 | MsG0780040794.01 | 0.805164 | 1.523668e-49 | 8.004395e-47 |
| MsG0280011376.01 | MsG0780040794.01 | 0.835587 | 1.538598e-56 | 1.889813e-53 |
| MsG0280011401.01 | MsG0780040794.01 | 0.805924 | 1.055499e-49 | 5.654311e-47 |
| MsG0380012005.01 | MsG0780040794.01 | 0.828412 | 9.122977e-55 | 9.061259e-52 |
| MsG0380012011.01 | MsG0780040794.01 | 0.826312 | 2.906093e-54 | 2.715685e-51 |
| MsG0380012331.01 | MsG0780040794.01 | 0.803145 | 4.007911e-49 | 1.998928e-46 |
| MsG0380012567.01 | MsG0780040794.01 | 0.820026 | 8.523907e-53 | 6.668500e-50 |
| MsG0380012868.01 | MsG0780040794.01 | 0.810244 | 1.269371e-50 | 7.612579e-48 |
| MsG0380013467.01 | MsG0780040794.01 | 0.867487 | 1.319496e-65 | 4.615133e-62 |
| MsG0380013471.01 | MsG0780040794.01 | 0.848607 | 5.503148e-60 | 1.015356e-56 |
| MsG0380013853.01 | MsG0780040794.01 | 0.838445 | 2.863743e-57 | 3.836667e-54 |
| MsG0380013908.01 | MsG0780040794.01 | 0.836584 | 8.587662e-57 | 1.086930e-53 |
| MsG0380014706.01 | MsG0780040794.01 | 0.817134 | 3.859741e-52 | 2.787580e-49 |
| MsG0380014727.01 | MsG0780040794.01 | 0.878057 | 3.820552e-69 | 1.965683e-65 |
| MsG0380014750.01 | MsG0780040794.01 | 0.817097 | 3.935492e-52 | 2.839279e-49 |
| MsG0680032413.01 | MsG0780040794.01 | 0.806718 | 7.180053e-50 | 3.925130e-47 |
| MsG0680032516.01 | MsG0780040794.01 | 0.873228 | 1.730524e-67 | 7.453673e-64 |
| MsG0680033136.01 | MsG0780040794.01 | 0.811779 | 5.900840e-51 | 3.685714e-48 |
| MsG0680033465.01 | MsG0780040794.01 | 0.813676 | 2.269327e-51 | 1.491574e-48 |
| MsG0680034235.01 | MsG0780040794.01 | 0.808526 | 2.965966e-50 | 1.699794e-47 |
| MsG0680035618.01 | MsG0780040794.01 | 0.855413 | 6.416119e-62 | 1.480190e-58 |
| MsG0480018606.01 | MsG0780040794.01 | 0.810152 | 1.328611e-50 | 7.948717e-48 |
| MsG0480018847.01 | MsG0780040794.01 | 0.812339 | 4.456861e-51 | 2.826317e-48 |
| MsG0480018850.01 | MsG0780040794.01 | 0.809759 | 1.614334e-50 | 9.559913e-48 |
| MsG0480018911.01 | MsG0780040794.01 | 0.842043 | 3.290192e-58 | 4.926650e-55 |
| MsG0480019313.01 | MsG0780040794.01 | 0.801000 | 1.106829e-48 | 5.228126e-46 |
| MsG0480019384.01 | MsG0780040794.01 | 0.844779 | 6.119399e-59 | 9.986475e-56 |
| MsG0480020024.01 | MsG0780040794.01 | 0.867696 | 1.131550e-65 | 3.986581e-62 |
| MsG0480020025.01 | MsG0780040794.01 | 0.802452 | 5.572569e-49 | 2.730734e-46 |
| MsG0480021160.01 | MsG0780040794.01 | 0.805867 | 1.084739e-49 | 5.802720e-47 |
| MsG0480022155.01 | MsG0780040794.01 | 0.816910 | 4.334304e-52 | 3.111189e-49 |
| MsG0480022162.01 | MsG0780040794.01 | 0.811070 | 8.413151e-51 | 5.157578e-48 |
| MsG0480022166.01 | MsG0780040794.01 | 0.805564 | 1.255894e-49 | 6.665754e-47 |
| MsG0480022239.01 | MsG0780040794.01 | 0.847856 | 8.875520e-60 | 1.598673e-56 |
| MsG0480022243.01 | MsG0780040794.01 | 0.819162 | 1.341974e-52 | 1.024767e-49 |
| MsG0480022245.01 | MsG0780040794.01 | 0.882950 | 6.773684e-71 | 4.210035e-67 |
| MsG0480022248.01 | MsG0780040794.01 | 0.802953 | 4.392503e-49 | 2.180017e-46 |
| MsG0480022535.01 | MsG0780040794.01 | 0.861276 | 1.149622e-63 | 3.235325e-60 |
| MsG0480023073.01 | MsG0780040794.01 | 0.829786 | 4.234961e-55 | 4.379326e-52 |
| MsG0480023251.01 | MsG0780040794.01 | 0.821767 | 3.389661e-53 | 2.783316e-50 |
| MsG0480023652.01 | MsG0780040794.01 | 0.822826 | 1.924293e-53 | 1.628598e-50 |
| MsG0580024491.01 | MsG0780040794.01 | -0.821667 | 3.574806e-53 | 2.927072e-50 |
| MsG0580024597.01 | MsG0780040794.01 | 0.850249 | 1.918862e-60 | 3.735615e-57 |
| MsG0580024598.01 | MsG0780040794.01 | 0.828983 | 6.636779e-55 | 6.701489e-52 |
| MsG0580024601.01 | MsG0780040794.01 | 0.819967 | 8.791808e-53 | 6.866645e-50 |
| MsG0580024829.01 | MsG0780040794.01 | 0.807058 | 6.083623e-50 | 3.355154e-47 |
| MsG0580024930.01 | MsG0780040794.01 | -0.805419 | 1.347218e-49 | 7.123947e-47 |
| MsG0580025644.01 | MsG0780040794.01 | 0.809864 | 1.532879e-50 | 9.101989e-48 |
| MsG0580025971.01 | MsG0780040794.01 | 0.822162 | 2.744673e-53 | 2.279196e-50 |
| MsG0580026032.01 | MsG0780040794.01 | 0.825224 | 5.267411e-54 | 4.772138e-51 |
| MsG0380015215.01 | MsG0780040794.01 | -0.806416 | 8.312434e-50 | 4.509158e-47 |
| MsG0380015533.01 | MsG0780040794.01 | 0.837345 | 5.491182e-57 | 7.111966e-54 |
| MsG0380015745.01 | MsG0780040794.01 | 0.836471 | 9.179214e-57 | 1.157945e-53 |
| MsG0380015810.01 | MsG0780040794.01 | 0.805906 | 1.064559e-49 | 5.700259e-47 |
| MsG0380015847.01 | MsG0780040794.01 | -0.805662 | 1.197972e-49 | 6.374547e-47 |
| MsG0380015896.01 | MsG0780040794.01 | 0.819890 | 9.155882e-53 | 7.135511e-50 |
| MsG0380016182.01 | MsG0780040794.01 | 0.829234 | 5.769431e-55 | 5.870028e-52 |
| MsG0380016740.01 | MsG0780040794.01 | 0.916399 | 1.867772e-85 | 5.126420e-81 |
| MsG0380017022.01 | MsG0780040794.01 | 0.830430 | 2.949765e-55 | 3.107075e-52 |
| MsG0380017023.01 | MsG0780040794.01 | 0.820912 | 5.336608e-53 | 4.278719e-50 |
| MsG0380017037.01 | MsG0780040794.01 | 0.832714 | 8.075036e-56 | 9.100426e-53 |
| MsG0380017085.01 | MsG0780040794.01 | 0.887644 | 1.190698e-72 | 8.927054e-69 |
| MsG0380017126.01 | MsG0780040794.01 | 0.800630 | 1.316720e-48 | 6.161044e-46 |
| MsG0380017293.01 | MsG0780040794.01 | 0.817059 | 4.013191e-52 | 2.892499e-49 |
| MsG0380017322.01 | MsG0780040794.01 | 0.838180 | 3.351619e-57 | 4.453379e-54 |
| MsG0380017338.01 | MsG0780040794.01 | 0.816644 | 4.973438e-52 | 3.543935e-49 |
| MsG0380017931.01 | MsG0780040794.01 | 0.841840 | 3.723384e-58 | 5.540035e-55 |
| MsG0480018345.01 | MsG0780040794.01 | 0.812845 | 3.453754e-51 | 2.219467e-48 |
| MsG0480018402.01 | MsG0780040794.01 | 0.850098 | 2.114656e-60 | 4.096512e-57 |
| MsG0580026498.01 | MsG0780040794.01 | 0.820437 | 6.863727e-53 | 5.430795e-50 |
| MsG0580027103.01 | MsG0780040794.01 | 0.806545 | 7.811073e-50 | 4.251261e-47 |
| MsG0580028419.01 | MsG0780040794.01 | 0.821765 | 3.392706e-53 | 2.785698e-50 |
| MsG0580028429.01 | MsG0780040794.01 | 0.811843 | 5.714784e-51 | 3.575550e-48 |
| MsG0580029550.01 | MsG0780040794.01 | 0.807087 | 5.999600e-50 | 3.311187e-47 |
| MsG0580029734.01 | MsG0780040794.01 | 0.807432 | 5.069047e-50 | 2.822928e-47 |
| MsG0580029879.01 | MsG0780040794.01 | 0.817127 | 3.874405e-52 | 2.797532e-49 |
| MsG0580029912.01 | MsG0780040794.01 | 0.832027 | 1.194598e-55 | 1.319172e-52 |
| MsG0580029914.01 | MsG0780040794.01 | 0.858768 | 6.567238e-63 | 1.694894e-59 |
| MsG0580029919.01 | MsG0780040794.01 | 0.841233 | 5.380669e-58 | 7.854853e-55 |
| MsG0680030515.01 | MsG0780040794.01 | 0.801418 | 9.089940e-49 | 4.338815e-46 |
| MsG0680030555.01 | MsG0780040794.01 | 0.807049 | 6.111099e-50 | 3.369487e-47 |
| MsG0680030636.01 | MsG0780040794.01 | 0.824750 | 6.813951e-54 | 6.090722e-51 |
| MsG0680030680.01 | MsG0780040794.01 | 0.814920 | 1.204975e-51 | 8.190663e-49 |
| MsG0280006634.01 | MsG0780040794.01 | 0.807882 | 4.067181e-50 | 2.291620e-47 |
| MsG0280006669.01 | MsG0780040794.01 | 0.830223 | 3.314955e-55 | 3.471100e-52 |
| MsG0280007165.01 | MsG0780040794.01 | -0.830042 | 3.668778e-55 | 3.821271e-52 |
| MsG0280007429.01 | MsG0780040794.01 | 0.816031 | 6.818476e-52 | 4.778080e-49 |
| MsG0280007637.01 | MsG0780040794.01 | 0.824458 | 7.982963e-54 | 7.074635e-51 |
| MsG0280007903.01 | MsG0780040794.01 | 0.814842 | 1.253726e-51 | 8.504445e-49 |
| MsG0280008098.01 | MsG0780040794.01 | 0.804380 | 2.221072e-49 | 1.143505e-46 |
| MsG0280008419.01 | MsG0780040794.01 | 0.803265 | 3.785780e-49 | 1.893972e-46 |
| MsG0280008928.01 | MsG0780040794.01 | 0.843792 | 1.126754e-58 | 1.782524e-55 |
| MsG0280008929.01 | MsG0780040794.01 | 0.866642 | 2.455167e-65 | 8.335322e-62 |
| MsG0280008932.01 | MsG0780040794.01 | 0.825958 | 3.528390e-54 | 3.264195e-51 |
| MsG0280009256.01 | MsG0780040794.01 | 0.836750 | 7.791611e-57 | 9.912072e-54 |
| MsG0280009756.01 | MsG0780040794.01 | 0.806282 | 8.871916e-50 | 4.796366e-47 |
| MsG0280009757.01 | MsG0780040794.01 | 0.843566 | 1.294782e-58 | 2.034043e-55 |
| MsG0280010288.01 | MsG0780040794.01 | 0.832225 | 1.067207e-55 | 1.185272e-52 |
| MsG0780035937.01 | MsG0780040794.01 | 0.815768 | 7.805765e-52 | 5.430987e-49 |
| MsG0780035960.01 | MsG0780040794.01 | 0.859500 | 3.962150e-63 | 1.048616e-59 |
| MsG0780036803.01 | MsG0780040794.01 | 0.821769 | 3.385694e-53 | 2.780303e-50 |
| MsG0780036978.01 | MsG0780040794.01 | 0.804272 | 2.339030e-49 | 1.200854e-46 |
| MsG0780037105.01 | MsG0780040794.01 | 0.805977 | 1.028699e-49 | 5.518359e-47 |
| MsG0780037330.01 | MsG0780040794.01 | 0.829958 | 3.845733e-55 | 3.996079e-52 |
| MsG0780037399.01 | MsG0780040794.01 | 0.829893 | 3.988353e-55 | 4.136858e-52 |
| MsG0780037701.01 | MsG0780040794.01 | 0.828451 | 8.927178e-55 | 8.876952e-52 |
| MsG0780039438.01 | MsG0780040794.01 | 0.842951 | 1.889272e-58 | 2.910524e-55 |
| MsG0780039806.01 | MsG0780040794.01 | 0.806465 | 8.118005e-50 | 4.409381e-47 |
| MsG0780039964.01 | MsG0780040794.01 | 0.811668 | 6.241166e-51 | 3.886508e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040794.01.T02 | MTR_7g098450 | 90.659 | 364 | 22 | 4 | 1 | 363 | 24 | 376 | 0.0 | 607 |
| MsG0780040794.01.T02 | MTR_7g098450 | 90.659 | 364 | 22 | 4 | 1 | 363 | 1 | 353 | 0.0 | 606 |
| MsG0780040794.01.T02 | MTR_7g099260 | 76.330 | 376 | 63 | 11 | 1 | 363 | 1 | 363 | 1.02e-163 | 462 |
| MsG0780040794.01.T02 | MTR_1g073230 | 40.517 | 232 | 97 | 7 | 120 | 344 | 38 | 235 | 6.23e-40 | 145 |
| MsG0780040794.01.T02 | MTR_1g073230 | 51.908 | 131 | 58 | 2 | 209 | 339 | 250 | 375 | 9.44e-40 | 145 |
| MsG0780040794.01.T02 | MTR_4g114690 | 57.547 | 106 | 42 | 1 | 231 | 333 | 153 | 258 | 1.54e-36 | 134 |
| MsG0780040794.01.T02 | MTR_5g029910 | 52.083 | 96 | 46 | 0 | 240 | 335 | 125 | 220 | 3.59e-32 | 121 |
| MsG0780040794.01.T02 | MTR_2g103795 | 50.000 | 104 | 52 | 0 | 237 | 340 | 139 | 242 | 4.92e-31 | 119 |
| MsG0780040794.01.T02 | MTR_4g010250 | 42.857 | 119 | 65 | 1 | 237 | 355 | 124 | 239 | 3.89e-27 | 108 |
| MsG0780040794.01.T02 | MTR_2g103795 | 47.561 | 82 | 43 | 0 | 240 | 321 | 142 | 223 | 5.93e-21 | 90.5 |
| MsG0780040794.01.T02 | MTR_3g463450 | 38.776 | 98 | 60 | 0 | 238 | 335 | 400 | 497 | 3.12e-17 | 83.2 |
| MsG0780040794.01.T02 | MTR_5g082130 | 34.259 | 108 | 71 | 0 | 228 | 335 | 289 | 396 | 2.80e-16 | 80.1 |
| MsG0780040794.01.T01 | MTR_7g098450 | 90.659 | 364 | 22 | 4 | 1 | 363 | 24 | 376 | 0.0 | 607 |
| MsG0780040794.01.T01 | MTR_7g098450 | 90.659 | 364 | 22 | 4 | 1 | 363 | 1 | 353 | 0.0 | 606 |
| MsG0780040794.01.T01 | MTR_7g099260 | 76.330 | 376 | 63 | 11 | 1 | 363 | 1 | 363 | 1.02e-163 | 462 |
| MsG0780040794.01.T01 | MTR_1g073230 | 40.517 | 232 | 97 | 7 | 120 | 344 | 38 | 235 | 6.23e-40 | 145 |
| MsG0780040794.01.T01 | MTR_1g073230 | 51.908 | 131 | 58 | 2 | 209 | 339 | 250 | 375 | 9.44e-40 | 145 |
| MsG0780040794.01.T01 | MTR_4g114690 | 57.547 | 106 | 42 | 1 | 231 | 333 | 153 | 258 | 1.54e-36 | 134 |
| MsG0780040794.01.T01 | MTR_5g029910 | 52.083 | 96 | 46 | 0 | 240 | 335 | 125 | 220 | 3.59e-32 | 121 |
| MsG0780040794.01.T01 | MTR_2g103795 | 50.000 | 104 | 52 | 0 | 237 | 340 | 139 | 242 | 4.92e-31 | 119 |
| MsG0780040794.01.T01 | MTR_4g010250 | 42.857 | 119 | 65 | 1 | 237 | 355 | 124 | 239 | 3.89e-27 | 108 |
| MsG0780040794.01.T01 | MTR_2g103795 | 47.561 | 82 | 43 | 0 | 240 | 321 | 142 | 223 | 5.93e-21 | 90.5 |
| MsG0780040794.01.T01 | MTR_3g463450 | 38.776 | 98 | 60 | 0 | 238 | 335 | 400 | 497 | 3.12e-17 | 83.2 |
| MsG0780040794.01.T01 | MTR_5g082130 | 34.259 | 108 | 71 | 0 | 228 | 335 | 289 | 396 | 2.80e-16 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040794.01.T02 | AT4G17940 | 53.535 | 99 | 46 | 0 | 237 | 335 | 150 | 248 | 2.61e-34 | 128 |
| MsG0780040794.01.T02 | AT5G20190 | 55.789 | 95 | 42 | 0 | 240 | 334 | 159 | 253 | 2.26e-33 | 125 |
| MsG0780040794.01.T02 | AT1G04530 | 57.692 | 104 | 41 | 2 | 232 | 335 | 118 | 218 | 4.23e-31 | 120 |
| MsG0780040794.01.T02 | AT1G04530 | 33.898 | 118 | 58 | 2 | 240 | 337 | 193 | 310 | 2.67e-14 | 73.2 |
| MsG0780040794.01.T02 | AT4G32340 | 53.535 | 99 | 45 | 1 | 237 | 334 | 110 | 208 | 2.66e-28 | 110 |
| MsG0780040794.01.T02 | AT1G80130 | 50.495 | 101 | 50 | 0 | 233 | 333 | 161 | 261 | 1.30e-27 | 110 |
| MsG0780040794.01.T02 | AT2G29670 | 42.857 | 98 | 56 | 0 | 238 | 335 | 421 | 518 | 6.39e-20 | 91.7 |
| MsG0780040794.01.T02 | AT2G29670 | 42.857 | 98 | 56 | 0 | 238 | 335 | 421 | 518 | 6.39e-20 | 91.7 |
| MsG0780040794.01.T02 | AT1G07280 | 40.351 | 114 | 61 | 1 | 237 | 350 | 435 | 541 | 5.05e-19 | 89.0 |
| MsG0780040794.01.T02 | AT1G07280 | 40.351 | 114 | 61 | 1 | 237 | 350 | 435 | 541 | 5.05e-19 | 89.0 |
| MsG0780040794.01.T02 | AT1G07280 | 40.351 | 114 | 61 | 1 | 237 | 350 | 435 | 541 | 5.05e-19 | 89.0 |
| MsG0780040794.01.T02 | AT3G47080 | 41.414 | 99 | 58 | 0 | 237 | 335 | 400 | 498 | 3.30e-16 | 80.1 |
| MsG0780040794.01.T01 | AT4G17940 | 53.535 | 99 | 46 | 0 | 237 | 335 | 150 | 248 | 2.61e-34 | 128 |
| MsG0780040794.01.T01 | AT5G20190 | 55.789 | 95 | 42 | 0 | 240 | 334 | 159 | 253 | 2.26e-33 | 125 |
| MsG0780040794.01.T01 | AT1G04530 | 57.692 | 104 | 41 | 2 | 232 | 335 | 118 | 218 | 4.23e-31 | 120 |
| MsG0780040794.01.T01 | AT1G04530 | 33.898 | 118 | 58 | 2 | 240 | 337 | 193 | 310 | 2.67e-14 | 73.2 |
| MsG0780040794.01.T01 | AT4G32340 | 53.535 | 99 | 45 | 1 | 237 | 334 | 110 | 208 | 2.66e-28 | 110 |
| MsG0780040794.01.T01 | AT1G80130 | 50.495 | 101 | 50 | 0 | 233 | 333 | 161 | 261 | 1.30e-27 | 110 |
| MsG0780040794.01.T01 | AT2G29670 | 42.857 | 98 | 56 | 0 | 238 | 335 | 421 | 518 | 6.39e-20 | 91.7 |
| MsG0780040794.01.T01 | AT2G29670 | 42.857 | 98 | 56 | 0 | 238 | 335 | 421 | 518 | 6.39e-20 | 91.7 |
| MsG0780040794.01.T01 | AT1G07280 | 40.351 | 114 | 61 | 1 | 237 | 350 | 435 | 541 | 5.05e-19 | 89.0 |
| MsG0780040794.01.T01 | AT1G07280 | 40.351 | 114 | 61 | 1 | 237 | 350 | 435 | 541 | 5.05e-19 | 89.0 |
| MsG0780040794.01.T01 | AT1G07280 | 40.351 | 114 | 61 | 1 | 237 | 350 | 435 | 541 | 5.05e-19 | 89.0 |
| MsG0780040794.01.T01 | AT3G47080 | 41.414 | 99 | 58 | 0 | 237 | 335 | 400 | 498 | 3.30e-16 | 80.1 |
Find 92 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCTTTGATACTTTACTTT+TGG | 0.211606 | 7:+82504678 | None:intergenic |
| GTGGCAAGTGGTTGATTATT+TGG | 0.253972 | 7:+82504968 | None:intergenic |
| AGCTCTTCAACACCAGTTCT+TGG | 0.272535 | 7:-82504593 | MsG0780040794.01.T01:CDS |
| TTATGCTCAGTTTCTGTATA+AGG | 0.290532 | 7:-82503835 | MsG0780040794.01.T01:intron |
| AGGATTCAGGATGAAGACTA+TGG | 0.297329 | 7:+82504516 | None:intergenic |
| GATTATAGTTCCATGGGTTC+TGG | 0.300216 | 7:-82503948 | MsG0780040794.01.T01:CDS |
| CAATTCTCTTCCTTATATAA+AGG | 0.301517 | 7:-82504943 | MsG0780040794.01.T01:five_prime_UTR |
| TGAAGAGAGATTCAATTATA+TGG | 0.329630 | 7:-82504294 | MsG0780040794.01.T01:CDS |
| TAAACCAGATCCTTTATATA+AGG | 0.343497 | 7:+82504933 | None:intergenic |
| GGAAGAATATTACAAGAAAA+TGG | 0.355814 | 7:-82503895 | MsG0780040794.01.T01:CDS |
| GGTTCTCTCCTATCTTCTTC+CGG | 0.364585 | 7:-82504572 | MsG0780040794.01.T01:CDS |
| CAAGATCAGGTGATGAGAAT+TGG | 0.375406 | 7:+82504845 | None:intergenic |
| TATTCATATATCATGCATTA+AGG | 0.379109 | 7:-82504992 | MsG0780040794.01.T01:five_prime_UTR |
| TTCTCTCTTTCAAAGCAAAC+AGG | 0.386547 | 7:-82504209 | MsG0780040794.01.T01:CDS |
| TTAAGTGCATGAAAGGATTC+AGG | 0.398047 | 7:+82504503 | None:intergenic |
| CATCACCTGATCTTGCTTCA+AGG | 0.401878 | 7:-82504837 | MsG0780040794.01.T01:five_prime_UTR |
| AATGATGGAGATAGTAATCA+TGG | 0.406178 | 7:-82503921 | MsG0780040794.01.T01:CDS |
| CTATGGGAATGATGATGAAT+AGG | 0.407108 | 7:+82504533 | None:intergenic |
| CTCAGAAACAATGGGTTCCC+AGG | 0.407926 | 7:+82503861 | None:intergenic |
| TCTTCCTTATATAAAGGATC+TGG | 0.415688 | 7:-82504937 | MsG0780040794.01.T01:five_prime_UTR |
| TCAGCAATGGAAGGAGAGAT+TGG | 0.418500 | 7:+82504407 | None:intergenic |
| AGTTCAATCTGAAGGGAACT+TGG | 0.434632 | 7:-82504351 | MsG0780040794.01.T01:CDS |
| TTCAGTGAGACAAAGATGTT+TGG | 0.449053 | 7:-82504252 | MsG0780040794.01.T01:CDS |
| TGAAGGAACCGGAAGAAGAT+AGG | 0.454703 | 7:+82504564 | None:intergenic |
| GGACTCATCAGAATCTGAAA+AGG | 0.461980 | 7:-82504815 | MsG0780040794.01.T01:five_prime_UTR |
| AAAGAAATGTATCTTGCAAA+GGG | 0.466113 | 7:-82504032 | MsG0780040794.01.T01:CDS |
| GGTGTTGATGTGAGTGGTGA+TGG | 0.469703 | 7:-82504005 | MsG0780040794.01.T01:CDS |
| AGGACTATCTGTGAAGGAAC+CGG | 0.472882 | 7:+82504553 | None:intergenic |
| ATATGGACTCTTCTTCTAAG+AGG | 0.475130 | 7:-82504277 | MsG0780040794.01.T01:CDS |
| ATGTATCTTGCAAAGGGACT+TGG | 0.477879 | 7:-82504026 | MsG0780040794.01.T01:CDS |
| TGCTTTGAAAGAGAGAAAGA+TGG | 0.480264 | 7:+82504215 | None:intergenic |
| ATGGGTTCTGGAGGGAATGA+TGG | 0.489888 | 7:-82503936 | MsG0780040794.01.T01:CDS |
| AGGTGGTGATTATAGTTCCA+TGG | 0.497150 | 7:-82503955 | MsG0780040794.01.T01:CDS |
| TTTGATGAGGAGGGACAGGT+TGG | 0.498943 | 7:-82504059 | MsG0780040794.01.T01:CDS |
| GGTGGCTGCAGAGGAGGGAA+TGG | 0.499605 | 7:-82503978 | MsG0780040794.01.T01:CDS |
| GATAGGAGAGAACCAAGAAC+TGG | 0.506501 | 7:+82504581 | None:intergenic |
| TCAGGTGATGAGAATTGGAC+AGG | 0.515437 | 7:+82504850 | None:intergenic |
| GATTGTGATGATGATGATGT+TGG | 0.516587 | 7:+82504453 | None:intergenic |
| AGTAGTGTGCTGAATAGTAC+TGG | 0.517028 | 7:-82504134 | MsG0780040794.01.T01:CDS |
| GGTGGTGATTATAGTTCCAT+GGG | 0.517897 | 7:-82503954 | MsG0780040794.01.T01:CDS |
| ATTAGAAGAGTTCAATCTGA+AGG | 0.520058 | 7:-82504359 | MsG0780040794.01.T01:CDS |
| CATAATTCCTCAGAAACAAT+GGG | 0.520475 | 7:+82503853 | None:intergenic |
| GAGTCCCTTGAAGCAAGATC+AGG | 0.521924 | 7:+82504832 | None:intergenic |
| ATCACCTGATCTTGCTTCAA+GGG | 0.524561 | 7:-82504836 | MsG0780040794.01.T01:five_prime_UTR |
| CTCCAAAAGTAAAGTATCAA+AGG | 0.525663 | 7:-82504680 | MsG0780040794.01.T01:five_prime_UTR |
| GACTCATCAGAATCTGAAAA+GGG | 0.526066 | 7:-82504814 | MsG0780040794.01.T01:intron |
| TAAAGAAATGTATCTTGCAA+AGG | 0.532277 | 7:-82504033 | MsG0780040794.01.T01:CDS |
| TGCAGAGGAGGGAATGGAGG+TGG | 0.534796 | 7:-82503972 | MsG0780040794.01.T01:CDS |
| ATCATTCCCTCCAGAACCCA+TGG | 0.538649 | 7:+82503938 | None:intergenic |
| GTTGTTACAACTAGTAGCAT+AGG | 0.539151 | 7:+82504319 | None:intergenic |
| TGATTGGTTGATGATGATTG+AGG | 0.540528 | 7:+82504634 | None:intergenic |
| GGCTGCAGAGGAGGGAATGG+AGG | 0.542066 | 7:-82503975 | MsG0780040794.01.T01:CDS |
| GGTATAGGTGGCTGCAGAGG+AGG | 0.542557 | 7:-82503984 | MsG0780040794.01.T01:CDS |
| ATGATGGAGATAGTAATCAT+GGG | 0.542937 | 7:-82503920 | MsG0780040794.01.T01:CDS |
| ATCTTGAAAGACAAAACAAA+GGG | 0.547476 | 7:-82504385 | MsG0780040794.01.T01:CDS |
| TCAGAAACAATGGGTTCCCA+GGG | 0.550997 | 7:+82503862 | None:intergenic |
| CTGGGAACCCATTGTTTCTG+AGG | 0.551696 | 7:-82503860 | MsG0780040794.01.T01:CDS |
| TTATTTAGGTATTGAATGAG+TGG | 0.558343 | 7:+82505057 | None:intergenic |
| TGGTTGATGATGATTGAGGA+TGG | 0.561065 | 7:+82504638 | None:intergenic |
| GCATAATTCCTCAGAAACAA+TGG | 0.561255 | 7:+82503852 | None:intergenic |
| AGAAAGATGGAATGGTCTCA+AGG | 0.561384 | 7:+82504228 | None:intergenic |
| TGAAAGAGAGAAAGATGGAA+TGG | 0.562440 | 7:+82504220 | None:intergenic |
| TATAGTTCCATGGGTTCTGG+AGG | 0.562677 | 7:-82503945 | MsG0780040794.01.T01:CDS |
| GATGTGAGTGGTGATGGTAT+AGG | 0.566548 | 7:-82503999 | MsG0780040794.01.T01:CDS |
| GGAGTACAAATATTACTGCA+AGG | 0.567594 | 7:+82504699 | None:intergenic |
| TGGAGCGAAGTGGTTGGTGG+TGG | 0.569007 | 7:+82504473 | None:intergenic |
| TTGTCTTTCAAGATCAGCAA+TGG | 0.569009 | 7:+82504394 | None:intergenic |
| TATAAGGAAGAGAATTGTAG+TGG | 0.575151 | 7:+82504949 | None:intergenic |
| TAGATGCTTAAGTGCATGAA+AGG | 0.576922 | 7:+82504496 | None:intergenic |
| CTTTCAAGATCAGCAATGGA+AGG | 0.579663 | 7:+82504398 | None:intergenic |
| GTGAGTGGTGATGGTATAGG+TGG | 0.580814 | 7:-82503996 | MsG0780040794.01.T01:CDS |
| AAAATGGTTCAGCAAAACCC+TGG | 0.581315 | 7:-82503879 | MsG0780040794.01.T01:CDS |
| TGTTGGAGCGAAGTGGTTGG+TGG | 0.586507 | 7:+82504470 | None:intergenic |
| TGGAGATAGTAATCATGGGG+TGG | 0.587358 | 7:-82503916 | MsG0780040794.01.T01:CDS |
| AAGAGAATTGTAGTGGCAAG+TGG | 0.588566 | 7:+82504956 | None:intergenic |
| GGATTCAGGATGAAGACTAT+GGG | 0.588650 | 7:+82504517 | None:intergenic |
| TTAGAAGAGTTCAATCTGAA+GGG | 0.596938 | 7:-82504358 | MsG0780040794.01.T01:CDS |
| GTATAGGTGGCTGCAGAGGA+GGG | 0.597903 | 7:-82503983 | MsG0780040794.01.T01:CDS |
| GAAAGATGGAATGGTCTCAA+GGG | 0.610385 | 7:+82504229 | None:intergenic |
| GATCTTGAAAGACAAAACAA+AGG | 0.612241 | 7:-82504386 | MsG0780040794.01.T01:CDS |
| GAATAGTACTGGCAGTGGTG+TGG | 0.617162 | 7:-82504123 | MsG0780040794.01.T01:CDS |
| AAATGGTTCAGCAAAACCCT+GGG | 0.619938 | 7:-82503878 | MsG0780040794.01.T01:CDS |
| ATGAATAGGACTATCTGTGA+AGG | 0.622956 | 7:+82504547 | None:intergenic |
| GGTGGTAAATGATGAAGTGA+AGG | 0.634203 | 7:-82504102 | MsG0780040794.01.T01:CDS |
| TGATGGAGATAGTAATCATG+GGG | 0.637625 | 7:-82503919 | MsG0780040794.01.T01:CDS |
| GATGGTATAGGTGGCTGCAG+AGG | 0.639534 | 7:-82503987 | MsG0780040794.01.T01:CDS |
| ATAGTTCCATGGGTTCTGGA+GGG | 0.645436 | 7:-82503944 | MsG0780040794.01.T01:CDS |
| TGATGTTGGAGCGAAGTGGT+TGG | 0.647415 | 7:+82504467 | None:intergenic |
| TAGTACTGGCAGTGGTGTGG+TGG | 0.662574 | 7:-82504120 | MsG0780040794.01.T01:CDS |
| GGACTTGGTGTTGATGTGAG+TGG | 0.667908 | 7:-82504011 | MsG0780040794.01.T01:CDS |
| GTGCTGAATAGTACTGGCAG+TGG | 0.681444 | 7:-82504128 | MsG0780040794.01.T01:CDS |
| ATGATGATGTTGGAGCGAAG+TGG | 0.693701 | 7:+82504463 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAAACCTTTTATTTTTT+TGG | - | Chr7:82502891-82502910 | MsG0780040794.01.T01:three_prime_UTR | 10.0% |
| !!! | AATAAACCTTTTATTTTTTT+GGG | - | Chr7:82502892-82502911 | MsG0780040794.01.T01:three_prime_UTR | 10.0% |
| !!! | ATAAAAGGTTTATTTTATTT+AGG | + | Chr7:82502886-82502905 | None:intergenic | 10.0% |
| !! | TATTCATATATCATGCATTA+AGG | - | Chr7:82502934-82502953 | MsG0780040794.01.T01:three_prime_UTR | 20.0% |
| !!! | TAAAAGAATTTTCAACAAGT+TGG | + | Chr7:82504184-82504203 | None:intergenic | 20.0% |
| !!! | TTTTCACCCAAAAAAATAAA+AGG | + | Chr7:82502901-82502920 | None:intergenic | 20.0% |
| ! | AAAGAAATGTATCTTGCAAA+GGG | - | Chr7:82503894-82503913 | MsG0780040794.01.T01:CDS | 25.0% |
| ! | ATCTTGAAAGACAAAACAAA+GGG | - | Chr7:82503541-82503560 | MsG0780040794.01.T01:CDS | 25.0% |
| ! | ATTAGTGCATACAAAACTAT+TGG | - | Chr7:82504281-82504300 | MsG0780040794.01.T01:CDS | 25.0% |
| ! | CAATTCTCTTCCTTATATAA+AGG | - | Chr7:82502983-82503002 | MsG0780040794.01.T01:three_prime_UTR | 25.0% |
| ! | GGAAGAATATTACAAGAAAA+TGG | - | Chr7:82504031-82504050 | MsG0780040794.01.T01:CDS | 25.0% |
| ! | TAAACCAGATCCTTTATATA+AGG | + | Chr7:82502996-82503015 | None:intergenic | 25.0% |
| ! | TAAAGAAATGTATCTTGCAA+AGG | - | Chr7:82503893-82503912 | MsG0780040794.01.T01:CDS | 25.0% |
| ! | TGAAGAGAGATTCAATTATA+TGG | - | Chr7:82503632-82503651 | MsG0780040794.01.T01:intron | 25.0% |
| !!! | TTATTTAGGTATTGAATGAG+TGG | + | Chr7:82502872-82502891 | None:intergenic | 25.0% |
| AAGGAAAAACGAGATTACAA+GGG | - | Chr7:82505027-82505046 | MsG0780040794.01.T01:five_prime_UTR | 30.0% | |
| ATTAGAAGAGTTCAATCTGA+AGG | - | Chr7:82503567-82503586 | MsG0780040794.01.T01:CDS | 30.0% | |
| CATAATTCCTCAGAAACAAT+GGG | + | Chr7:82504076-82504095 | None:intergenic | 30.0% | |
| CTACTTAAATGGTTACAAAC+TGG | + | Chr7:82504929-82504948 | None:intergenic | 30.0% | |
| GATCTTGAAAGACAAAACAA+AGG | - | Chr7:82503540-82503559 | MsG0780040794.01.T01:CDS | 30.0% | |
| TACTGCAAGGAAAAAAAACT+TGG | + | Chr7:82503217-82503236 | None:intergenic | 30.0% | |
| TATAAGGAAGAGAATTGTAG+TGG | + | Chr7:82502980-82502999 | None:intergenic | 30.0% | |
| TCTTCCTTATATAAAGGATC+TGG | - | Chr7:82502989-82503008 | MsG0780040794.01.T01:three_prime_UTR | 30.0% | |
| TGTGAGAAAAACATTAGTGA+TGG | + | Chr7:82503168-82503187 | None:intergenic | 30.0% | |
| TTAGAAGAGTTCAATCTGAA+GGG | - | Chr7:82503568-82503587 | MsG0780040794.01.T01:CDS | 30.0% | |
| TTATGCTCAGTTTCTGTATA+AGG | - | Chr7:82504091-82504110 | MsG0780040794.01.T01:CDS | 30.0% | |
| ! | AATGATGGAGATAGTAATCA+TGG | - | Chr7:82504005-82504024 | MsG0780040794.01.T01:CDS | 30.0% |
| ! | ATGATGGAGATAGTAATCAT+GGG | - | Chr7:82504006-82504025 | MsG0780040794.01.T01:CDS | 30.0% |
| ! | CTCCAAAAGTAAAGTATCAA+AGG | - | Chr7:82503246-82503265 | MsG0780040794.01.T01:CDS | 30.0% |
| ! | GCACTAATAAAACCAAGTTT+TGG | + | Chr7:82504269-82504288 | None:intergenic | 30.0% |
| ! | GTCCTTTGATACTTTACTTT+TGG | + | Chr7:82503251-82503270 | None:intergenic | 30.0% |
| ! | TCATTTTCAACTCCAAAACT+TGG | - | Chr7:82504254-82504273 | MsG0780040794.01.T01:CDS | 30.0% |
| ! | TGCTTTTATTGCCAAATGAA+CGG | + | Chr7:82504997-82505016 | None:intergenic | 30.0% |
| ! | TTAGCAACATGTTTTCTGAT+TGG | + | Chr7:82503311-82503330 | None:intergenic | 30.0% |
| ! | TTGCCTCAACATTTTCATTT+TGG | - | Chr7:82504712-82504731 | MsG0780040794.01.T01:intron | 30.0% |
| !! | ATAAAAGCACCAACTTATGA+AGG | - | Chr7:82505008-82505027 | MsG0780040794.01.T01:five_prime_UTR | 30.0% |
| !! | GAAACTGATTTTGAAGATGA+AGG | - | Chr7:82503753-82503772 | MsG0780040794.01.T01:intron | 30.0% |
| !!! | ACATTTTCATTTTGGAGCTA+TGG | - | Chr7:82504720-82504739 | MsG0780040794.01.T01:intron | 30.0% |
| AAATGTTGAGGCAAACATTG+TGG | + | Chr7:82504706-82504725 | None:intergenic | 35.0% | |
| AATGTTGAGGCAAACATTGT+GGG | + | Chr7:82504705-82504724 | None:intergenic | 35.0% | |
| AGCATATTCTGATGCACATA+AGG | - | Chr7:82504798-82504817 | MsG0780040794.01.T01:intron | 35.0% | |
| ATACTAGCAGATCCAAATGA+CGG | - | Chr7:82504387-82504406 | MsG0780040794.01.T01:CDS | 35.0% | |
| ATATGGACTCTTCTTCTAAG+AGG | - | Chr7:82503649-82503668 | MsG0780040794.01.T01:intron | 35.0% | |
| ATGAATAGGACTATCTGTGA+AGG | + | Chr7:82503382-82503401 | None:intergenic | 35.0% | |
| CTTGTTCTTATCCGTTCATT+TGG | - | Chr7:82504983-82505002 | MsG0780040794.01.T01:five_prime_UTR | 35.0% | |
| GAAGGAAAAACGAGATTACA+AGG | - | Chr7:82505026-82505045 | MsG0780040794.01.T01:five_prime_UTR | 35.0% | |
| GACTCATCAGAATCTGAAAA+GGG | - | Chr7:82503112-82503131 | MsG0780040794.01.T01:three_prime_UTR | 35.0% | |
| GAGAAGTTCTGTCACAATAT+GGG | - | Chr7:82504409-82504428 | MsG0780040794.01.T01:CDS | 35.0% | |
| GAGCTATACATTGAAACAGA+AGG | + | Chr7:82504129-82504148 | None:intergenic | 35.0% | |
| GCATAATTCCTCAGAAACAA+TGG | + | Chr7:82504077-82504096 | None:intergenic | 35.0% | |
| GCTCCAAAATGAAAATGTTG+AGG | + | Chr7:82504718-82504737 | None:intergenic | 35.0% | |
| GGAGTACAAATATTACTGCA+AGG | + | Chr7:82503230-82503249 | None:intergenic | 35.0% | |
| GTTGTTACAACTAGTAGCAT+AGG | + | Chr7:82503610-82503629 | None:intergenic | 35.0% | |
| TAGATGCTTAAGTGCATGAA+AGG | + | Chr7:82503433-82503452 | None:intergenic | 35.0% | |
| TGAAAGAGAGAAAGATGGAA+TGG | + | Chr7:82503709-82503728 | None:intergenic | 35.0% | |
| TGATGGAGATAGTAATCATG+GGG | - | Chr7:82504007-82504026 | MsG0780040794.01.T01:CDS | 35.0% | |
| TTAAGTGCATGAAAGGATTC+AGG | + | Chr7:82503426-82503445 | None:intergenic | 35.0% | |
| TTCAGTGAGACAAAGATGTT+TGG | - | Chr7:82503674-82503693 | MsG0780040794.01.T01:intron | 35.0% | |
| TTCTCTCTTTCAAAGCAAAC+AGG | - | Chr7:82503717-82503736 | MsG0780040794.01.T01:intron | 35.0% | |
| TTGTATTTGTACCTGTCATC+AGG | + | Chr7:82504507-82504526 | None:intergenic | 35.0% | |
| TTGTCTTTCAAGATCAGCAA+TGG | + | Chr7:82503535-82503554 | None:intergenic | 35.0% | |
| ! | AAAACATTAGTGATGGAGAG+AGG | + | Chr7:82503161-82503180 | None:intergenic | 35.0% |
| ! | AAGTGAAGGATAGAGTTTTC+AGG | - | Chr7:82503838-82503857 | MsG0780040794.01.T01:CDS | 35.0% |
| ! | AGTGAAGGATAGAGTTTTCA+GGG | - | Chr7:82503839-82503858 | MsG0780040794.01.T01:CDS | 35.0% |
| ! | CAGTTCGTTGACTACTTAAA+TGG | + | Chr7:82504940-82504959 | None:intergenic | 35.0% |
| ! | CTATGGGAATGATGATGAAT+AGG | + | Chr7:82503396-82503415 | None:intergenic | 35.0% |
| ! | GATTGTGATGATGATGATGT+TGG | + | Chr7:82503476-82503495 | None:intergenic | 35.0% |
| ! | TTTAGATCGAGTTGCATACT+TGG | - | Chr7:82504572-82504591 | MsG0780040794.01.T01:CDS | 35.0% |
| !! | CTCGTTTTTCCTTCATAAGT+TGG | + | Chr7:82505020-82505039 | None:intergenic | 35.0% |
| !! | GAGGATGGATCAGTTTTATA+TGG | + | Chr7:82503276-82503295 | None:intergenic | 35.0% |
| !! | TGATTGGTTGATGATGATTG+AGG | + | Chr7:82503295-82503314 | None:intergenic | 35.0% |
| !! | TGCTTTGAAAGAGAGAAAGA+TGG | + | Chr7:82503714-82503733 | None:intergenic | 35.0% |
| !!! | GCTATCAGCATTTTTTTCTC+AGG | + | Chr7:82504781-82504800 | None:intergenic | 35.0% |
| AAAATGGTTCAGCAAAACCC+TGG | - | Chr7:82504047-82504066 | MsG0780040794.01.T01:CDS | 40.0% | |
| AAATGGTTCAGCAAAACCCT+GGG | - | Chr7:82504048-82504067 | MsG0780040794.01.T01:CDS | 40.0% | |
| AAGAGAATTGTAGTGGCAAG+TGG | + | Chr7:82502973-82502992 | None:intergenic | 40.0% | |
| AATATTCCTCTGCTCCTTCA+CGG | + | Chr7:82504356-82504375 | None:intergenic | 40.0% | |
| AGAAAGATGGAATGGTCTCA+AGG | + | Chr7:82503701-82503720 | None:intergenic | 40.0% | |
| AGGATTCAGGATGAAGACTA+TGG | + | Chr7:82503413-82503432 | None:intergenic | 40.0% | |
| AGGTGGTGATTATAGTTCCA+TGG | - | Chr7:82503971-82503990 | MsG0780040794.01.T01:CDS | 40.0% | |
| AGTAGTGTGCTGAATAGTAC+TGG | - | Chr7:82503792-82503811 | MsG0780040794.01.T01:intron | 40.0% | |
| AGTTCAATCTGAAGGGAACT+TGG | - | Chr7:82503575-82503594 | MsG0780040794.01.T01:CDS | 40.0% | |
| ATCACCTGATCTTGCTTCAA+GGG | - | Chr7:82503090-82503109 | MsG0780040794.01.T01:three_prime_UTR | 40.0% | |
| ATGTATCTTGCAAAGGGACT+TGG | - | Chr7:82503900-82503919 | MsG0780040794.01.T01:CDS | 40.0% | |
| CAAGATCAGGTGATGAGAAT+TGG | + | Chr7:82503084-82503103 | None:intergenic | 40.0% | |
| CTTTCAAGATCAGCAATGGA+AGG | + | Chr7:82503531-82503550 | None:intergenic | 40.0% | |
| GAAAGATGGAATGGTCTCAA+GGG | + | Chr7:82503700-82503719 | None:intergenic | 40.0% | |
| GATTATAGTTCCATGGGTTC+TGG | - | Chr7:82503978-82503997 | MsG0780040794.01.T01:CDS | 40.0% | |
| GGACTCATCAGAATCTGAAA+AGG | - | Chr7:82503111-82503130 | MsG0780040794.01.T01:three_prime_UTR | 40.0% | |
| GGAGAAGTTCTGTCACAATA+TGG | - | Chr7:82504408-82504427 | MsG0780040794.01.T01:CDS | 40.0% | |
| GGATTCAGGATGAAGACTAT+GGG | + | Chr7:82503412-82503431 | None:intergenic | 40.0% | |
| GGTGGTAAATGATGAAGTGA+AGG | - | Chr7:82503824-82503843 | MsG0780040794.01.T01:intron | 40.0% | |
| GGTGGTGATTATAGTTCCAT+GGG | - | Chr7:82503972-82503991 | MsG0780040794.01.T01:CDS | 40.0% | |
| GTCATTTGGATCTGCTAGTA+TGG | + | Chr7:82504388-82504407 | None:intergenic | 40.0% | |
| GTGGCAAGTGGTTGATTATT+TGG | + | Chr7:82502961-82502980 | None:intergenic | 40.0% | |
| TACTGCTCGTTCAAAATAGC+TGG | + | Chr7:82504475-82504494 | None:intergenic | 40.0% | |
| ! | ACAATATGGGAAGCTGGTTT+GGG | - | Chr7:82504422-82504441 | MsG0780040794.01.T01:CDS | 40.0% |
| ! | TTAGTGATGGAGAGAGGTAA+AGG | + | Chr7:82503155-82503174 | None:intergenic | 40.0% |
| !! | TGGTTGATGATGATTGAGGA+TGG | + | Chr7:82503291-82503310 | None:intergenic | 40.0% |
| !! | TTTCAGGGTGAGTTTTGATG+AGG | - | Chr7:82503854-82503873 | MsG0780040794.01.T01:CDS | 40.0% |
| AGAACCAGAAATCACAAGCC+GGG | - | Chr7:82504852-82504871 | MsG0780040794.01.T01:five_prime_UTR | 45.0% | |
| AGCTCTTCAACACCAGTTCT+TGG | - | Chr7:82503333-82503352 | MsG0780040794.01.T01:intron | 45.0% | |
| AGGACTATCTGTGAAGGAAC+CGG | + | Chr7:82503376-82503395 | None:intergenic | 45.0% | |
| CACAATATGGGAAGCTGGTT+TGG | - | Chr7:82504421-82504440 | MsG0780040794.01.T01:CDS | 45.0% | |
| CATCACCTGATCTTGCTTCA+AGG | - | Chr7:82503089-82503108 | MsG0780040794.01.T01:three_prime_UTR | 45.0% | |
| CCAAAGGAAACTTGCATACG+CGG | + | Chr7:82504647-82504666 | None:intergenic | 45.0% | |
| CGCGTATGCAAGTTTCCTTT+GGG | - | Chr7:82504645-82504664 | MsG0780040794.01.T01:five_prime_UTR | 45.0% | |
| GACAGAACTTCTCCGTCATT+TGG | + | Chr7:82504402-82504421 | None:intergenic | 45.0% | |
| GAGAACCAGAAATCACAAGC+CGG | - | Chr7:82504851-82504870 | MsG0780040794.01.T01:five_prime_UTR | 45.0% | |
| GATAGGAGAGAACCAAGAAC+TGG | + | Chr7:82503348-82503367 | None:intergenic | 45.0% | |
| GGTTCTCTCCTATCTTCTTC+CGG | - | Chr7:82503354-82503373 | MsG0780040794.01.T01:intron | 45.0% | |
| TACAAGCTTCTCCTGATGAC+AGG | - | Chr7:82504493-82504512 | MsG0780040794.01.T01:CDS | 45.0% | |
| TCAGCAATGGAAGGAGAGAT+TGG | + | Chr7:82503522-82503541 | None:intergenic | 45.0% | |
| TCAGGTGATGAGAATTGGAC+AGG | + | Chr7:82503079-82503098 | None:intergenic | 45.0% | |
| TCTGTCACAATATGGGAAGC+TGG | - | Chr7:82504416-82504435 | MsG0780040794.01.T01:CDS | 45.0% | |
| TGAAGGAACCGGAAGAAGAT+AGG | + | Chr7:82503365-82503384 | None:intergenic | 45.0% | |
| TGGAGATAGTAATCATGGGG+TGG | - | Chr7:82504010-82504029 | MsG0780040794.01.T01:CDS | 45.0% | |
| ! | ATGATGATGTTGGAGCGAAG+TGG | + | Chr7:82503466-82503485 | None:intergenic | 45.0% |
| ! | TATAGTTCCATGGGTTCTGG+AGG | - | Chr7:82503981-82504000 | MsG0780040794.01.T01:CDS | 45.0% |
| ! | TCAGAAACAATGGGTTCCCA+GGG | + | Chr7:82504067-82504086 | None:intergenic | 45.0% |
| ! | TTTGGAGCTATGGCAACTAC+AGG | - | Chr7:82504730-82504749 | MsG0780040794.01.T01:intron | 45.0% |
| !! | AAGTTTCCTTTGGGACACAG+AGG | - | Chr7:82504654-82504673 | MsG0780040794.01.T01:five_prime_UTR | 45.0% |
| !! | AGGGTGAGTTTTGATGAGGA+GGG | - | Chr7:82503858-82503877 | MsG0780040794.01.T01:CDS | 45.0% |
| !! | ATAGTTCCATGGGTTCTGGA+GGG | - | Chr7:82503982-82504001 | MsG0780040794.01.T01:CDS | 45.0% |
| !! | GATGTGAGTGGTGATGGTAT+AGG | - | Chr7:82503927-82503946 | MsG0780040794.01.T01:CDS | 45.0% |
| ATCATTCCCTCCAGAACCCA+TGG | + | Chr7:82503991-82504010 | None:intergenic | 50.0% | |
| CAGTGCAAACAAGACCGTGA+AGG | - | Chr7:82504339-82504358 | MsG0780040794.01.T01:CDS | 50.0% | |
| CCGCGTATGCAAGTTTCCTT+TGG | - | Chr7:82504644-82504663 | MsG0780040794.01.T01:five_prime_UTR | 50.0% | |
| GAGTCCCTTGAAGCAAGATC+AGG | + | Chr7:82503097-82503116 | None:intergenic | 50.0% | |
| TGATGTTGGAGCGAAGTGGT+TGG | + | Chr7:82503462-82503481 | None:intergenic | 50.0% | |
| TGGATCTGCTAGTATGGCTC+TGG | + | Chr7:82504382-82504401 | None:intergenic | 50.0% | |
| TTTGATGAGGAGGGACAGGT+TGG | - | Chr7:82503867-82503886 | MsG0780040794.01.T01:CDS | 50.0% | |
| ! | CTCAGAAACAATGGGTTCCC+AGG | + | Chr7:82504068-82504087 | None:intergenic | 50.0% |
| ! | GAAACCCGGCTTGTGATTTC+TGG | + | Chr7:82504859-82504878 | None:intergenic | 50.0% |
| !! | ATGGGTTCTGGAGGGAATGA+TGG | - | Chr7:82503990-82504009 | MsG0780040794.01.T01:CDS | 50.0% |
| !! | CAGGGTGAGTTTTGATGAGG+AGG | - | Chr7:82503857-82503876 | MsG0780040794.01.T01:CDS | 50.0% |
| !! | CTGGGAACCCATTGTTTCTG+AGG | - | Chr7:82504066-82504085 | MsG0780040794.01.T01:CDS | 50.0% |
| !! | GAATAGTACTGGCAGTGGTG+TGG | - | Chr7:82503803-82503822 | MsG0780040794.01.T01:intron | 50.0% |
| !! | GAGTTTTGATGAGGAGGGAC+AGG | - | Chr7:82503863-82503882 | MsG0780040794.01.T01:CDS | 50.0% |
| !! | GGACTTGGTGTTGATGTGAG+TGG | - | Chr7:82503915-82503934 | MsG0780040794.01.T01:CDS | 50.0% |
| !! | GGTGTTGATGTGAGTGGTGA+TGG | - | Chr7:82503921-82503940 | MsG0780040794.01.T01:CDS | 50.0% |
| !! | GTGAGTGGTGATGGTATAGG+TGG | - | Chr7:82503930-82503949 | MsG0780040794.01.T01:CDS | 50.0% |
| !! | GTGCTGAATAGTACTGGCAG+TGG | - | Chr7:82503798-82503817 | MsG0780040794.01.T01:intron | 50.0% |
| ACAAGACCGTGAAGGAGCAG+AGG | - | Chr7:82504347-82504366 | MsG0780040794.01.T01:CDS | 55.0% | |
| ACAGAGGAAGACGAGGATGC+AGG | - | Chr7:82504670-82504689 | MsG0780040794.01.T01:five_prime_UTR | 55.0% | |
| CCGACACTGCAACAGAAACC+CGG | + | Chr7:82504873-82504892 | None:intergenic | 55.0% | |
| CCGGGTTTCTGTTGCAGTGT+CGG | - | Chr7:82504870-82504889 | MsG0780040794.01.T01:five_prime_UTR | 55.0% | |
| CGTCTTCCTCTGTGTCCCAA+AGG | + | Chr7:82504663-82504682 | None:intergenic | 55.0% | |
| GATGGTATAGGTGGCTGCAG+AGG | - | Chr7:82503939-82503958 | MsG0780040794.01.T01:CDS | 55.0% | |
| GTATAGGTGGCTGCAGAGGA+GGG | - | Chr7:82503943-82503962 | MsG0780040794.01.T01:CDS | 55.0% | |
| TGTTGGAGCGAAGTGGTTGG+TGG | + | Chr7:82503459-82503478 | None:intergenic | 55.0% | |
| TTGGGACACAGAGGAAGACG+AGG | - | Chr7:82504663-82504682 | MsG0780040794.01.T01:five_prime_UTR | 55.0% | |
| !! | TAGTACTGGCAGTGGTGTGG+TGG | - | Chr7:82503806-82503825 | MsG0780040794.01.T01:intron | 55.0% |
| GGTATAGGTGGCTGCAGAGG+AGG | - | Chr7:82503942-82503961 | MsG0780040794.01.T01:CDS | 60.0% | |
| TGCAGAGGAGGGAATGGAGG+TGG | - | Chr7:82503954-82503973 | MsG0780040794.01.T01:CDS | 60.0% | |
| !! | TGGAGCGAAGTGGTTGGTGG+TGG | + | Chr7:82503456-82503475 | None:intergenic | 60.0% |
| GGCTGCAGAGGAGGGAATGG+AGG | - | Chr7:82503951-82503970 | MsG0780040794.01.T01:CDS | 65.0% | |
| GGTGGCTGCAGAGGAGGGAA+TGG | - | Chr7:82503948-82503967 | MsG0780040794.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 82502871 | 82505077 | 82502871 | ID=MsG0780040794.01;Name=MsG0780040794.01 |
| Chr7 | mRNA | 82502871 | 82505077 | 82502871 | ID=MsG0780040794.01.T01;Parent=MsG0780040794.01;Name=MsG0780040794.01.T01;_AED=0.22;_eAED=0.22;_QI=349|1|1|1|0.66|0.5|4|318|363 |
| Chr7 | exon | 82503836 | 82504713 | 82503836 | ID=MsG0780040794.01.T01:exon:19295;Parent=MsG0780040794.01.T01 |
| Chr7 | exon | 82504815 | 82505077 | 82504815 | ID=MsG0780040794.01.T01:exon:19294;Parent=MsG0780040794.01.T01 |
| Chr7 | five_prime_UTR | 82504815 | 82505077 | 82504815 | ID=MsG0780040794.01.T01:five_prime_utr;Parent=MsG0780040794.01.T01 |
| Chr7 | five_prime_UTR | 82504628 | 82504713 | 82504628 | ID=MsG0780040794.01.T01:five_prime_utr;Parent=MsG0780040794.01.T01 |
| Chr7 | CDS | 82503836 | 82504627 | 82503836 | ID=MsG0780040794.01.T01:cds;Parent=MsG0780040794.01.T01 |
| Chr7 | CDS | 82503434 | 82503606 | 82503434 | ID=MsG0780040794.01.T01:cds;Parent=MsG0780040794.01.T01 |
| Chr7 | CDS | 82503189 | 82503315 | 82503189 | ID=MsG0780040794.01.T01:cds;Parent=MsG0780040794.01.T01 |
| Chr7 | three_prime_UTR | 82502871 | 82503188 | 82502871 | ID=MsG0780040794.01.T01:three_prime_utr;Parent=MsG0780040794.01.T01 |
| Chr7 | mRNA | 82502871 | 82504781 | 82502871 | ID=MsG0780040794.01.T02;Parent=MsG0780040794.01;Name=MsG0780040794.01.T02;_AED=0.25;_eAED=0.25;_QI=154|1|1|1|1|1|3|318|363 |
| Chr7 | exon | 82503836 | 82504781 | 82503836 | ID=MsG0780040794.01.T02:exon:19298;Parent=MsG0780040794.01.T02 |
| Chr7 | five_prime_UTR | 82504628 | 82504781 | 82504628 | ID=MsG0780040794.01.T02:five_prime_utr;Parent=MsG0780040794.01.T02 |
| Chr7 | CDS | 82503836 | 82504627 | 82503836 | ID=MsG0780040794.01.T02:cds;Parent=MsG0780040794.01.T02 |
| Chr7 | CDS | 82503434 | 82503606 | 82503434 | ID=MsG0780040794.01.T02:cds;Parent=MsG0780040794.01.T02 |
| Chr7 | CDS | 82503189 | 82503315 | 82503189 | ID=MsG0780040794.01.T02:cds;Parent=MsG0780040794.01.T02 |
| Chr7 | three_prime_UTR | 82502871 | 82503188 | 82502871 | ID=MsG0780040794.01.T02:three_prime_utr;Parent=MsG0780040794.01.T02 |
| Gene Sequence |
| Protein sequence |
